@article{KošćakPeharBožinovićetal.2022,
  author    = {Košćak, Marta and Pehar, Isabela and Božinović, Ksenija and Kole, Goutam Kumar and Sobočanec, Sandra and Podgorski, Iva I. and Pinterić, Marija and M{\"u}ller-Buschbaum, Klaus and Majhen, Dragomira and Piantanida, Ivo and Marder, Todd B.},
  title     = {Para-N-methylpyridinium pyrenes: impact of positive charge on ds-DNA/RNA and protein recognition, photo-induced bioactivity, and intracellular localisation},
  series = {Pharmaceutics},
  volume    = {14},
  journal   = {Pharmaceutics},
  number    = {11},
  issn      = {1999-4923},
  doi       = {10.3390/pharmaceutics14112499},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-297247},
  year      = {2022},
  abstract  = {The 2- and 2,7- substituted para-N-methylpyridinium pyrene cations show high-affinity intercalation into ds-DNAs, whereas their non-methylated analogues interacted with ds-DNA/RNA only in the protonated form (at pH 5), but not at physiological conditions (pH 7). The fluorescence from non-methylated analogues was strongly dependent on the protonation of the pyridines; consequently, they act as fluorescence ratiometric probes for simultaneous detection of both ds-DNA and BSA at pH 5, relying on the ratio between intensities at 420 nm (BSA specific) and 520 nm (DNA specific), whereby exclusively ds-DNA sensing could be switched-off by adjustment to pH 7. Only methylated, permanently charged pyrenes show photoinduced cleavage of circular DNA, attributed to pyrene-mediated irradiation-induced production of singlet oxygen. Consequently, the moderate toxicity of these cations against human cell lines is strongly increased upon irradiation. Detailed studies revealed increased total ROS production in cells treated by the compounds studied, accompanied by cell swelling and augmentation of cellular complexity. The most photo-active 2-para-N-methylpyridinium pyrene showed significant localization at mitochondria, its photo-bioactivity likely due to mitochondrial DNA damage. Other derivatives were mostly non-selectively distributed between various cytoplasmic organelles, thus being less photoactive.},
  language  = {en}
}
@article{GmachBathePetersTeluguetal.2022,
  author    = {Gmach, Philipp and Bathe-Peters, Marc and Telugu, Narasimha and Miller, Duncan C. and Annibale, Paolo},
  title     = {Fluorescence spectroscopy of low-level endogenous β-adrenergic receptor expression at the plasma membrane of differentiating human iPSC-derived cardiomyocytes},
  series = {International Journal of Molecular Sciences},
  volume    = {23},
  journal   = {International Journal of Molecular Sciences},
  number    = {18},
  issn      = {1422-0067},
  doi       = {10.3390/ijms231810405},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-288277},
  year      = {2022},
  abstract  = {The potential of human-induced pluripotent stem cells (hiPSCs) to be differentiated into cardiomyocytes (CMs) mimicking adult CMs functional morphology, marker genes and signaling characteristics has been investigated since over a decade. The evolution of the membrane localization of CM-specific G protein-coupled receptors throughout differentiation has received, however, only limited attention to date. We employ here advanced fluorescent spectroscopy, namely linescan Fluorescence Correlation Spectroscopy (FCS), to observe how the plasma membrane abundance of the β\(_1\)- and β\(_2\)-adrenergic receptors (β\(_{1/2}\)-ARs), labelled using a bright and photostable fluorescent antagonist, evolves during the long-term monolayer culture of hiPSC-derived CMs. We compare it to the kinetics of observed mRNA levels in wildtype (WT) hiPSCs and in two CRISPR/Cas9 knock-in clones. We conduct these observations against the backdrop of our recent report of cell-to-cell expression variability, as well as of the subcellular localization heterogeneity of β-ARs in adult CMs.},
  language  = {en}
}
@article{WildervanckHechtNowakKrol2022,
  author    = {Wildervanck, Martijn J. and Hecht, Reinhard and Nowak-Kr{\´o}l, Agnieszka},
  title     = {Synthesis and strong solvatochromism of push-pull thienylthiazole boron complexes},
  series = {Molecules},
  volume    = {27},
  journal   = {Molecules},
  number    = {17},
  issn      = {1420-3049},
  doi       = {10.3390/molecules27175510},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-286186},
  year      = {2022},
  abstract  = {The solvatochromic behavior of two donor-π bridge-acceptor (D-π-A) compounds based on the 2-(3-boryl-2-thienyl)thiazole π-linker and indandione acceptor moiety are investigated. DFT/TD-DFT calculations were performed in combination with steady-state absorption and emission measurements, along with electrochemical studies, to elucidate the effect of two different strongly electron-donating hydrazonyl units on the solvatochromic and fluorescence behavior of these compounds. The Lippert-Mataga equation was used to estimate the change in dipole moments (Δµ) between ground and excited states based on the measured spectroscopic properties in solvents of varying polarity with the data being supported by theoretical studies. The two asymmetrical D-π-A molecules feature strong solvatochromic shifts in fluorescence of up to ~4300 cm\(^{-1}\) and a concomitant change of the emission color from yellow to red. These changes were accompanied by an increase in Stokes shift to reach values as large as ~5700-5800 cm\(^{-1}\). Quantum yields of ca. 0.75 could be observed for the N,N-dimethylhydrazonyl derivative in nonpolar solvents, which gradually decreased along with increasing solvent polarity, as opposed to the consistently reduced values obtained for the N,N-diphenylhydrazonyl derivative of up to ca. 0.20 in nonpolar solvents. These two push-pull molecules are contrasted with a structurally similar acceptor-π bridge-acceptor (A-π-A) compound.},
  language  = {en}
}
@article{FullWoelflickRadackietal.2022,
  author    = {Full, Felix and W{\"o}lflick, Quentin and Radacki, Krzysztof and Braunschweig, Holger and Nowak-Kr{\´o}l, Agnieszka},
  title     = {Enhanced Optical Properties of Azaborole Helicenes by Lateral and Helical Extension},
  series = {Chemistry - A European Journal},
  volume    = {28},
  journal   = {Chemistry - A European Journal},
  number    = {62},
  doi       = {10.1002/chem.202202280},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-293671},
  year      = {2022},
  abstract  = {The synthesis and characterization of laterally extended azabora[5]-, -[6]- and -[7]helicenes, assembled from N-heteroaromatic and dibenzo[g,p]chrysene building blocks is described. Formally, the π-conjugated systems of the pristine azaborole helicenes were enlarged with a phenanthrene unit leading to compounds with large Stokes shifts, significantly enhanced luminescence quantum yields (Φ) and dissymmetry factors (g\(_{lum}\)). The beneficial effect on optical properties was also observed for helical elongation. The combined contributions of lateral and helical extensions resulted in a compound showing green emission with Φ of 0.31 and |g\(_{lum}\)| of 2.2×10\(^{-3}\), highest within the series of π-extended azaborahelicenes and superior to emission intensity and chiroptical response of its non-extended congener. This study shows that helical and lateral extensions of π-conjugated systems are viable strategies to improve features of azaborole helicenes. In addition, single crystal X-ray analysis of configurationally stable [6]- and -[7]helicenes was used to provide insight into their packing arrangements.},
  language  = {en}
}
@article{BanKaračićTomićetal.2021,
  author    = {Ban, Željka and Karačić, Zrinka and Tomić, Sanja and Amini, Hashem and Marder, Todd B. and Piantanida, Ivo},
  title     = {Triarylborane dyes as a novel non-covalent and non-inhibitive fluorimetric markers for DPP III enzyme},
  series = {Molecules},
  volume    = {26},
  journal   = {Molecules},
  number    = {16},
  issn      = {1420-3049},
  doi       = {10.3390/molecules26164816},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-245046},
  year      = {2021},
  abstract  = {Novel dyes were prepared by simple "click CuAAC" attachment of a triarylborane-alkyne to the azide side chain of an amino acid yielding triarylborane dye 1 which was conjugated with pyrene (dye 2) forming a triarylborane-pyrene FRET pair. In contrast to previous cationic triarylboranes, the novel neutral dyes interact only with proteins, while their affinity to DNA/RNA is completely abolished. Both the reference triarylborane amino acid and triarylborane-pyrene conjugate bind to BSA and the hDPP III enzyme with high affinities, exhibiting a strong (up to 100-fold) fluorescence increase, whereby the triarylborane-pyrene conjugate additionally retained FRET upon binding to the protein. Furthermore, the triarylborane dyes, upon binding to the hDPP III enzyme, did not impair its enzymatic activity under a wide range of experimental conditions, thus being the first non-covalent fluorimetric markers for hDPP III, also applicable during enzymatic reactions with hDPP III substrates.},
  language  = {en}
}
@article{SchulzWuerthner2022,
  author    = {Schulz, Alexander and W{\"u}rthner, Frank},
  title     = {Folding-induced fluorescence enhancement in a series of merocyanine hetero-folda-trimers},
  series = {Angewandte Chemie International Edition},
  volume    = {61},
  journal   = {Angewandte Chemie International Edition},
  number    = {2},
  doi       = {10.1002/anie.202114667},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-256582},
  year      = {2022},
  abstract  = {Many dyes suffer from fast non-radiative decay pathways, thereby showing only short-lived excited states and weak photoluminescence. Here we show a pronounced fluorescence enhancement for a weakly fluorescent merocyanine (MC) dye by being co-facially stacked to other dyes in hetero-folda-trimer architectures. By means of fluorescence spectroscopy (lifetime, quantum yield) the fluorescence enhancement was explained by the rigidification of the emitting chromophore in the defined foldamer architecture and the presence of a non-forbidden lowest exciton state in H-coupled hetero-aggregates. This folding-induced fluorescence enhancement (FIFE) for specific sequences of π-stacked dyes points at a viable strategy toward improved fluorophores that relates to the approach used by nature in the green fluorescent protein (GFP).},
  language  = {en}
}
@article{GriesbeckMichailRauchetal.2019,
  author    = {Griesbeck, Stefanie and Michail, Evripidis and Rauch, Florian and Ogasawara, Hiroaki and Wang, Chenguang and Sato, Yoshikatsu and Edkins, Robert M. and Zhang, Zuolun and Taki, Masayasu and Lambert, Christoph and Yamaguchi, Shigehiro and Marder, Todd B.},
  title     = {The Effect of Branching on the One- and Two-Photon Absorption, Cell Viability, and Localization of Cationic Triarylborane Chromophores with Dipolar versus Octupolar Charge Distributions for Cellular Imaging},
  series = {Chemistry - A European Journal},
  volume    = {25},
  journal   = {Chemistry - A European Journal},
  number    = {57},
  doi       = {10.1002/chem.201902461},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-212887},
  pages     = {13164 -- 13175},
  year      = {2019},
  abstract  = {Two different chromophores, namely a dipolar and an octupolar system, were prepared and their linear and nonlinear optical properties as well as their bioimaging capabilities were compared. Both contain triphenylamine as the donor and a triarylborane as the acceptor, the latter modified with cationic trimethylammonio groups to provide solubility in aqueous media. The octupolar system exhibits a much higher two-photon brightness, and also better cell viability and enhanced selectivity for lysosomes compared with the dipolar chromophore. Furthermore, both dyes were applied in two-photon excited fluorescence (TPEF) live-cell imaging.},
  language  = {en}
}
@article{FullPanchalGoetzetal.2021,
  author    = {Full, Julian and Panchal, Santosh P. and G{\"o}tz, Julian and Krause, Ana-Maria and Nowak-Kr{\´o}l, Agnieszka},
  title     = {Modular Synthesis of Organoboron Helically Chiral Compounds: Cutouts from Extended Helices},
  series = {Angewandte Chemie International Edition},
  volume    = {60},
  journal   = {Angewandte Chemie International Edition},
  number    = {8},
  doi       = {10.1002/anie.202014138},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-225775},
  pages     = {4350 -- 4357},
  year      = {2021},
  abstract  = {Two types of helically chiral compounds bearing one and two boron atoms were synthesized by a modular approach. Formation of the helical scaffolds was executed by the introduction of boron to flexible biaryl and triaryl derived from small achiral building blocks. All-ortho-fused azabora[7]helicenes feature exceptional configurational stability, blue or green fluorescence with quantum yields (Φ\(_{fl}\)) of 18-24 \% in solution, green or yellow solid-state emission (Φ\(_{fl}\) up to 23 \%), and strong chiroptical response with large dissymmetry factors of up to 1.12×10\(^{-2}\). Azabora[9]helicenes consisting of angularly and linearly fused rings are blue emitters exhibiting Φ\(_{fl}\) of up to 47 \% in CH\(_{2}\)Cl\(_{2}\) and 25 \% in the solid state. As revealed by the DFT calculations, their P-M interconversion pathway is more complex than that of H1. Single-crystal X-ray analysis shows clear differences in the packing arrangement of methyl and phenyl derivatives. These molecules are proposed as primary structures of extended helices.},
  language  = {en}
}
@article{MahlShoyamaKrauseetal.2020,
  author    = {Mahl, Magnus and Shoyama, Kazutaka and Krause, Ana-Maria and Schmidt, David and W{\"u}rthner, Frank},
  title     = {Base-Assisted Imidization: A Synthetic Method for the Introduction of Bulky Imide Substituents to Control Packing and Optical Properties of Naphthalene and Perylene Imides},
  series = {Angewandte Chemie International Edition},
  volume    = {59},
  journal   = {Angewandte Chemie International Edition},
  number    = {32},
  doi       = {10.1002/anie.202004965},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-218246},
  pages     = {13401 -- 13405},
  year      = {2020},
  abstract  = {We report the direct imidization of naphthalene and perylene dicarboxylic anhydrides/esters with bulky ortho,ortho-diaryl- and ortho,ortho-dialkynylaniline derivatives. This imidization method uses n-butyllithium as a strong base to increase the reactivity of bulky amine derivatives, proceeds under mild reaction conditions, requires only stoichiometric amounts of reactants and gives straightforward access to new sterically crowded rylene dicarboximides. Mechanistic investigations suggest an isoimide as intermediary product, which was converted to the corresponding imide upon addition of an aqueous base. Single-crystal X-ray diffraction analyses reveal dimeric packing motifs for monoimides, while two-side shielded bisimides crystallize in isolated molecules without close π-π-interactions. Spectroscopic investigations disclose the influence of the bulky substituents on the optical properties in the solid state.},
  language  = {en}
}
@article{StolteHechtXieetal.2020,
  author    = {Stolte, Matthias and Hecht, Reinhard and Xie, Zengqi and Liu, Linlin and Kaufmann, Christina and Kudzus, Astrid and Schmidt, David and W{\"u}rthner, Frank},
  title     = {Crystal Engineering of 1D Exciton Systems Composed of Single- and Double-Stranded Perylene Bisimide J-Aggregates},
  series = {Advanced Optical Materials},
  volume    = {8},
  journal   = {Advanced Optical Materials},
  number    = {18},
  doi       = {10.1002/adom.202000926},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-218221},
  year      = {2020},
  abstract  = {Single crystals of three at bay area tetraphenoxy-substituted perylene bisimide dyes are grown by vacuum sublimation. X-ray analysis reveals the self-assembly of these highly twisted perylene bisimides (PBIs) in the solid state via imide-imide hydrogen bonding into hydrogen-bonded PBI chains. The crystallographic insights disclose that the conformation and sterical congestion imparted by the phenoxy substituents can be controlled by ortho-substituents. Accordingly, whilst sterically less demanding methyl and isopropyl substituents afford double-stranded PBI chains of complementary P and M atropo-enantiomers, single hydrogen-bonded chains of homochiral PBIs are observed for the sterically more demanding ortho-phenyl substituents. Investigation of the absorption and fluorescence properties of microcrystals and thin films of these PBIs allow for an unambiguous interpretation of these exciton systems. Thus, the J-aggregates of the double-stranded crystals exhibit a much larger (negative) exciton coupling than the single-stranded one, which in contrast has the higher solid-state fluorescence quantum yield.},
  language  = {en}
}