@article{UeceylerHomolaGonzalezetal.2014,
  author    = {{\"U}{\c{c}}eyler, Nurcan and Homola, Gy{\"o}rgy A. and Gonz{\´a}lez, Hans Guerrero and Kramer, Daniela and Wanner, Christoph and Weidemann, Frank and Solymosi, L{\´a}szl{\´o} and Sommer, Claudia},
  title     = {Increased Arterial Diameters in the Posterior Cerebral Circulation in Men with Fabry Disease},
  doi       = {10.1371/journal.pone.0087054},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112614},
  year      = {2014},
  abstract  = {A high load of white matter lesions and enlarged basilar arteries have been shown in selected patients with Fabry disease, a disorder associated with an increased stroke risk. We studied a large cohort of patients with Fabry disease to differentially investigate white matter lesion load and cerebral artery diameters. We retrospectively analyzed cranial magnetic resonance imaging scans of 87 consecutive Fabry patients, 20 patients with ischemic stroke, and 36 controls. We determined the white matter lesion load applying the Fazekas score on fluid-attenuated inversion recovery sequences and measured the diameters of cerebral arteries on 3D-reconstructions of the time-of-flight-MR-angiography scans. Data of different Fabry patient subgroups (males - females; normal - impaired renal function) were compared with data of patients with stroke and controls. A history of stroke or transient ischemic attacks was present in 4/30 males (13\%) and 5/57 (9\%) females with Fabry disease, all in the anterior circulation. Only one man with Fabry disease showed confluent cerebral white matter lesions in the Fazekas score assessment (1\%). Male Fabry patients had a larger basilar artery (p<0.01) and posterior cerebral artery diameter (p<0.05) compared to male controls. This was independent of disease severity as measured by renal function and did not lead to changes in arterial blood flow properties. A basilar artery diameter of >3.2 mm distinguished between men with Fabry disease and controls (sensitivity: 87\%, specificity: 86\%, p<0.001), but not from stroke patients. Enlarged arterial diameters of the posterior circulation are present only in men with Fabry disease independent of disease severity.},
  language  = {en}
}
@article{ZhouDierksKertelsetal.2020,
  author    = {Zhou, Xiang and Dierks, Alexander and Kertels, Olivia and Samnick, Samuel and Kircher, Malte and Buck, Andreas K. and Haertle, Larissa and Knorz, Sebastian and B{\"o}ckle, David and Scheller, Lukas and Messerschmidt, Janin and Barakat, Mohammad and Truger, Marietta and Haferlach, Claudia and Einsele, Hermann and Rasche, Leo and Kort{\"u}m, K. Martin and Lapa, Constantin},
  title     = {The link between cytogenetics/genomics and imaging patterns of relapse and progression in patients with relapsed/refractory multiple myeloma: a pilot study utilizing 18F-FDG PET/CT},
  series = {Cancers},
  volume    = {12},
  journal   = {Cancers},
  number    = {9},
  issn      = {2072-6694},
  doi       = {10.3390/cancers12092399},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-211157},
  year      = {2020},
  abstract  = {Utilizing 18F-fluorodeoxyglucose (18F-FDG) positron emission tomography (PET)/computed tomography (CT), we performed this pilot study to evaluate the link between cytogenetic/genomic markers and imaging patterns in relapsed/refractory (RR) multiple myeloma (MM). We retrospectively analyzed data of 24 patients with RRMM who were treated at our institution between November 2018 and February 2020. At the last relapse/progression, patients had been treated with a median of three (range 1-10) lines of therapy. Six (25\%) patients showed FDG avid extramedullary disease without adjacency to bone. We observed significantly higher maximum standardized uptake values (SUV\(_{max}\)) in patients harboring del(17p) compared with those without del(17p) (p = 0.025). Moreover, a high SUV\(_{max}\) of >15 indicated significantly shortened progression-free survival (PFS) (p = 0.01) and overall survival (OS) (p = 0.0002). One female patient exhibited biallelic TP53 alteration, i.e., deletion and mutation, in whom an extremely high SUV\(_{max}\) of 37.88 was observed. In summary, this pilot study suggested a link between del(17p)/TP53 alteration and high SUV\(_{max}\) on 18F-FDG PET/CT in RRMM patients. Further investigations are highly warranted at this point.},
  language  = {en}
}
@article{ZhouDierksKertelsetal.2020,
  author    = {Zhou, Xiang and Dierks, Alexander and Kertels, Olivia and Kircher, Malte and Schirbel, Andreas and Samnick, Samuel and Buck, Andreas K. and Knorz, Sebastian and B{\"o}ckle, David and Scheller, Lukas and Messerschmidt, Janin and Barakat, Mohammad and Kort{\"u}m, K. Martin and Rasche, Leo and Einsele, Hermann and Lapa, Constantin},
  title     = {18F-FDG, 11C-Methionine, and 68Ga-Pentixafor PET/CT in patients with smoldering multiple myeloma: imaging pattern and clinical features},
  series = {Cancers},
  volume    = {12},
  journal   = {Cancers},
  number    = {8},
  issn      = {2072-6694},
  doi       = {10.3390/cancers12082333},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-211240},
  year      = {2020},
  abstract  = {This study aimed to explore the correlation between imaging patterns and clinical features in patients with smoldering multiple myeloma (SMM) who simultaneously underwent 18F-FDG, 11C-Methionine, and 68Ga-Pentixafor positron emission tomography/computed tomography (PET/CT). We retrieved and analyzed clinical characteristics and PET imaging data of 10 patients with SMM. We found a significant correlation between bone marrow (BM) plasma cell (PC) infiltration and mean standardized uptake values (SUV\(_{mean}\)) of lumbar vertebrae L2-L4 on 11C-Methionine PET/CT scans (r = 0.676, p = 0.031) and 68Ga-Pentixafor PET/CT scans (r = 0.839, p = 0.002). However, there was no significant correlation between BM involvement and SUV\(_{mean}\) of lumbar vertebrae L2-L4 on 18F-FDG PET/CT scans (r = 0.558, p = 0.093). Similarly, mean target-to-background ratios (TBR\(_{mean}\)) of lumbar vertebrae L2-L4 also correlated with bone marrow plasma cell (BMPC) infiltration in 11C-Methionine PET/CT (r = 0.789, p = 0.007) and 68Ga-Pentixafor PET/CT (r = 0.724, p = 0.018) PET/CT. In contrast, we did not observe a significant correlation between BMPC infiltration rate and TBR\(_{mean}\) in 18F-FDG PET/CT (r = 0.355, p = 0.313). Additionally, on 11C-Methionine PET/CT scans, we found a significant correlation between BMPC infiltration and TBR\(_{max}\) of lumbar vertebrae L2-L4 (r = 0.642, p = 0.045). In conclusion, 11C-Methionine and 68Ga-Pentixafor PET/CT demonstrate higher sensitivity than 18F-FDG PET/CT in detecting BM involvement in SMM.},
  language  = {en}
}
@article{ZellerMuellerGutberletetal.2013,
  author    = {Zeller, Mario and M{\"u}ller, Alexander and Gutberlet, Marcel and Nichols, Thomas and Hahn, Dietbert and K{\"o}stler, Herbert and Bartsch, Andreas J.},
  title     = {Boosting BOLD fMRI by K-Space Density Weighted Echo Planar Imaging},
  series = {PLoS ONE},
  journal   = {PLoS ONE},
  doi       = {10.1371/journal.pone.0074501},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-97233},
  year      = {2013},
  abstract  = {Functional magnetic resonance imaging (fMRI) has become a powerful and influential method to non-invasively study neuronal brain activity. For this purpose, the blood oxygenation level-dependent (BOLD) effect is most widely used. T2* weighted echo planar imaging (EPI) is BOLD sensitive and the prevailing fMRI acquisition technique. Here, we present an alternative to its standard Cartesian recordings, i.e. k-space density weighted EPI, which is expected to increase the signal-to-noise ratio in fMRI data. Based on in vitro and in vivo pilot measurements, we show that fMRI by k-space density weighted EPI is feasible and that this new acquisition technique in fact boosted spatial and temporal SNR as well as the detection of local fMRI activations. Spatial resolution, spatial response function and echo time were identical for density weighted and conventional Cartesian EPI. The signal-to-noise ratio gain of density weighting can improve activation detection and has the potential to further increase the sensitivity of fMRI investigations.},
  language  = {en}
}
@phdthesis{Zeller2013,
  author    = {Zeller, Mario},
  title     = {Dichtegewichtete Magnetresonanz-Bildgebung mit Multi-Echo-Sequenzen},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-84142},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2013},
  abstract  = {Das Signal-zu-Rausch-Verh{\"a}ltnis (SNR) stellt bei modernen Bildgebungstechniken in der Magnetresonanz-Tomographie heutzutage oftmals die entscheidende Limitation dar. Eine Verbesserung durch Modifikation der Hardware ist kostspielig und f{\"u}hrt meistens zu einer Verst{\"a}rkung anderer Probleme, wie zum Beispiel erh{\"o}hte Energiedeposition ins Gewebe. Im Gegensatz dazu ist Dichtegewichtung eine Methode, die eine SNR-Erh{\"o}hung durch Modifikation der Aufnahmetechnik erm{\"o}glicht. In der MR-Bildgebung erfolgt oftmals eine retrospektive Filterung des aufgenommenen Signalverlaufs, beispielsweise zur Artefaktreduktion. Damit einhergehend findet eine Ver{\"a}nderung der Modulationstransferfunktion (MTF) bzw. ihrer Fouriertransformierten, der r{\"a}umlichen Antwortfunktion (SRF), statt. Optimales SNR wird nach dem Matched Filter-Theorem erzielt, wenn die nachtr{\"a}gliche Filterung dem aufgenommenen Signalverlauf proportional ist. Dies steht dem Ziel der Artefaktreduktion entgegen. Bei Dichtegewichtung steht durch nicht-kartesische Abtastung des k-Raums mit der k-Raum-Dichte ein zus{\"a}tzlicher Freiheitsgrad zur Verf{\"u}gung. Dieser erm{\"o}glicht es, im Falle eines konstanten Signalverlaufs eine gew{\"u}nschte MTF ohne Filterung zu erreichen. Bei ver{\"a}nderlichem Signalverlauf kann ein SNR Matched Filter angewendet werden, dessen negative Einfl{\"u}sse auf die MTF durch Dichtegewichtung kompensiert werden. Somit erm{\"o}glicht Dichtegewichtung eine vorgegebene MTF und gleichzeitig ein optimales SNR. In der vorliegenden Arbeit wurde Dichtegewichtung erstmals bei den schnellen Multi-Echo-Sequenzen Turbo-Spin-Echo und Echoplanar-Bildgebung (EPI) angewendet. Im Gegensatz zu bisherigen Implementierungen muss hier der Signalabfall durch T2- bzw. T2*-Relaxation ber{\"u}cksichtigt werden. Dies f{\"u}hrt dazu, dass eine prospektiv berechnete dichtegewichtete Verteilung nur bei einer Relaxationszeit optimal ist. Bei Geweben mit abweichenden Relaxationszeiten k{\"o}nnen sich wie auch bei den kartesischen Varianten dieser Sequenzen {\"A}nderungen an SRF und SNR ergeben. Bei dichtegewichteter Turbo-Spin-Echo-Bildgebung des Gehirns konnte mit den gew{\"a}hlten Sequenzparametern ein SNR-Vorteil von 43 \% gegen{\"u}ber der kartesischen Variante erzielt werden. Die Akquisition wurde dabei auf die T2-Relaxationszeit von weißer Substanz optimiert. Da die meisten Gewebe im Gehirn eine {\"a}hnliche Relaxationszeit aufweisen, blieb der visuelle Gesamteindruck identisch zur kartesischen Bildgebung. Der SNR-Gewinn konnte in der dichtegewichteten Implementierung zur Messzeithalbierung genutzt werden. Dichtegewichtete EPI weist eine hohe Anf{\"a}lligkeit f{\"u}r geometrische Verzerrungen, welche durch Inhomogenit{\"a}ten des Hauptmagnetfeldes verursacht werden, auf. Die Verzerrungen konnten erfolgreich mit einer Conjugate Phase-Methode korrigiert werden. Dazu muss die r{\"a}umliche Verteilung der Feldinhomogenit{\"a}ten bekannt sein. Dazu ist zus{\"a}tzlich zur eigentlichen EPI-Aufnahme die zeitaufwendige Aufnahme einer sogenannten Fieldmap erforderlich. Im Rahmen dieser Arbeit konnte eine Methode entwickelt werden, welche die zur Erlangung einer Fieldmap notwendige Aufnahmedauer auf wenige Sekunden reduziert. Bei dieser Art der Fieldmap-Aufnahme m{\"u}ssen jedoch durch Atmung hervorgerufene Effekte auf die Bildphase ber{\"u}cksichtigt werden. Die Fieldmap-Genauigkeit kann durch Aufnahme unter Atempause, Mittelung oder retrospektiver Phasenkorrektur erh{\"o}ht werden. F{\"u}r die gew{\"a}hlten EPI-Sequenzparameter wurde mit Dichtegewichtung gegen{\"u}ber der kartesischen Variante ein SNR-Gewinn von 14 \% erzielt. Anhand einer funktionellen MRT (fMRI)-Fingertapping-Studie konnte demonstriert werden, dass die SNR-Steigerung auch zu einer signifikant erh{\"o}hten Aktivierungsdetektion in Teilen der Hirnareale f{\"u}hrt, die bei der Fingerbewegung involviert sind. Die Verwendung von zus{\"a}tzlicher EPI-Phasenkorrektur und iterativer Optimierung der dichtegewichteten k-Raum-Abtastung f{\"u}hrt zu weiteren Verbesserungen der dichtegewichteten Bildgebung mit Multi-Echo-Sequenzen.},
  subject      = {Kernspintomografie},
  language  = {de}
}
@article{ZellerHeidemeierGrigoleitetal.2017,
  author    = {Zeller, Daniel and Heidemeier, Anke and Grigoleit, G{\"o}tz Ulrich and M{\"u}llges, Wolfgang},
  title     = {Case report: subacute tetraplegia in an immunocompromised patient},
  series = {BMC Neurology},
  volume    = {17},
  journal   = {BMC Neurology},
  number    = {31},
  doi       = {10.1186/s12883-017-0814-5},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-157576},
  year      = {2017},
  abstract  = {Background: Clinical reasoning in Neurology is based on general associations which help to deduce the site of the lesion. However, even "golden principles" may occasionally be deceptive. Here, we describe the case of subacute flaccid tetraparesis due to motor cortical lesions. To our knowledge, this is the first report to include an impressive illustration of nearly symmetric motor cortical involvement of encephalitis on brain MRI. Case presentation: A 51 year old immunocompromized man developed a high-grade pure motor flaccid tetraparesis over few days. Based on clinical presentation, critical illness polyneuromyopathy was suspected. However, brain MRI revealed symmetrical hyperintensities strictly limited to the subcortical precentral gyrus. An encephalitis, possibly due to CMV infection, turned out to be the most likely cause. Conclusion: While recognition of basic clinical patterns is indispensable in neurological reasoning, awareness of central conditions mimicking peripheral nervous disease may be crucial to detect unsuspected, potentially treatable conditions.},
  language  = {en}
}
@article{WurmbSchlerethKredeletal.2014,
  author    = {Wurmb, Thomas Erik and Schlereth, Stefan and Kredel, Markus and Muellenbach, Ralf M. and Wunder, Christian and Brederlau, J{\"o}rg and Roewer, Norbert and Kenn, Werner and Kunze, Ekkehard},
  title     = {Routine Follow-Up Cranial Computed Tomography for Deeply Sedated, Intubated, and Ventilated Multiple Trauma Patients with Suspected Severe Head Injury},
  series = {BioMed Research International},
  journal   = {BioMed Research International},
  number    = {361949},
  doi       = {10.1155/2014/361949},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120084},
  year      = {2014},
  abstract  = {Background. Missed or delayed detection of progressive neuronal damage after traumatic brain injury (TBI) may have negative impact on the outcome. We investigated whether routine follow-up CT is beneficial in sedated and mechanically ventilated trauma patients. Methods. The study design is a retrospective chart review. A routine follow-up cCT was performed 6 hours after the admission scan. We defined 2 groups of patients, group I: patients with equal or recurrent pathologies and group II: patients with new findings or progression of known pathologies. Results. A progression of intracranial injury was found in 63 patients (42\%) and 18 patients (12\%) had new findings in cCT 2 (group II). In group II a change in therapy was found in 44 out of 81 patients (54\%). 55 patients with progression or new findings on the second cCT had no clinical signs of neurological deterioration. Of those 24 patients (44\%) had therapeutic consequences due to the results of the follow-up cCT. Conclusion. We found new diagnosis or progression of intracranial pathology in 54\% of the patients. In 54\% of patients with new findings and progression of pathology, therapy was changed due to the results of follow-up cCT. In trauma patients who are sedated and ventilated for different reasons a routine follow-up CT is beneficial.},
  language  = {en}
}
@article{WoźnickiLaquaMessmeretal.2022,
  author    = {Wo{\'{z}}nicki, Piotr and Laqua, Fabian Christopher and Messmer, Katharina and Kunz, Wolfgang Gerhard and Stief, Christian and N{\"o}renberg, Dominik and Schreier, Andrea and W{\´o}jcik, Jan and Ruebenthaler, Johannes and Ingrisch, Michael and Ricke, Jens and Buchner, Alexander and Schulz, Gerald Bastian and Gresser, Eva},
  title     = {Radiomics for the prediction of overall survival in patients with bladder cancer prior to radical cystectomy},
  series = {Cancers},
  volume    = {14},
  journal   = {Cancers},
  number    = {18},
  issn      = {2072-6694},
  doi       = {10.3390/cancers14184449},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-288098},
  year      = {2022},
  abstract  = {(1) Background: To evaluate radiomics features as well as a combined model with clinical parameters for predicting overall survival in patients with bladder cancer (BCa). (2) Methods: This retrospective study included 301 BCa patients who received radical cystectomy (RC) and pelvic lymphadenectomy. Radiomics features were extracted from the regions of the primary tumor and pelvic lymph nodes as well as the peritumoral regions in preoperative CT scans. Cross-validation was performed in the training cohort, and a Cox regression model with an elastic net penalty was trained using radiomics features and clinical parameters. The models were evaluated with the time-dependent area under the ROC curve (AUC), Brier score and calibration curves. (3) Results: The median follow-up time was 56 months (95\% CI: 48-74 months). In the follow-up period from 1 to 7 years after RC, radiomics models achieved comparable predictive performance to validated clinical parameters with an integrated AUC of 0.771 (95\% CI: 0.657-0.869) compared to an integrated AUC of 0.761 (95\% CI: 0.617-0.874) for the prediction of overall survival (p = 0.98). A combined clinical and radiomics model stratified patients into high-risk and low-risk groups with significantly different overall survival (p < 0.001). (4) Conclusions: Radiomics features based on preoperative CT scans have prognostic value in predicting overall survival before RC. Therefore, radiomics may guide early clinical decision-making.},
  language  = {en}
}
@article{WoznickiLaquaBleyetal.2022,
  author    = {Woznicki, Piotr and Laqua, Fabian and Bley, Thorsten and Baeßler, Bettina},
  title     = {AutoRadiomics: a framework for reproducible radiomics research},
  series = {Frontiers in Radiology},
  volume    = {2},
  journal   = {Frontiers in Radiology},
  issn      = {2673-8740},
  doi       = {10.3389/fradi.2022.919133},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-284813},
  year      = {2022},
  abstract  = {Purpose Machine learning based on radiomics features has seen huge success in a variety of clinical applications. However, the need for standardization and reproducibility has been increasingly recognized as a necessary step for future clinical translation. We developed a novel, intuitive open-source framework to facilitate all data analysis steps of a radiomics workflow in an easy and reproducible manner and evaluated it by reproducing classification results in eight available open-source datasets from different clinical entities. Methods The framework performs image preprocessing, feature extraction, feature selection, modeling, and model evaluation, and can automatically choose the optimal parameters for a given task. All analysis steps can be reproduced with a web application, which offers an interactive user interface and does not require programming skills. We evaluated our method in seven different clinical applications using eight public datasets: six datasets from the recently published WORC database, and two prostate MRI datasets—Prostate MRI and Ultrasound With Pathology and Coordinates of Tracked Biopsy (Prostate-UCLA) and PROSTATEx. Results In the analyzed datasets, AutoRadiomics successfully created and optimized models using radiomics features. For WORC datasets, we achieved AUCs ranging from 0.56 for lung melanoma metastases detection to 0.93 for liposarcoma detection and thereby managed to replicate the previously reported results. No significant overfitting between training and test sets was observed. For the prostate cancer detection task, results were better in the PROSTATEx dataset (AUC = 0.73 for prostate and 0.72 for lesion mask) than in the Prostate-UCLA dataset (AUC 0.61 for prostate and 0.65 for lesion mask), with external validation results varying from AUC = 0.51 to AUC = 0.77. Conclusion AutoRadiomics is a robust tool for radiomic studies, which can be used as a comprehensive solution, one of the analysis steps, or an exploratory tool. Its wide applicability was confirmed by the results obtained in the diverse analyzed datasets. The framework, as well as code for this analysis, are publicly available under https://github.com/pwoznicki/AutoRadiomics.},
  language  = {en}
}
@phdthesis{Wirth2012,
  author    = {Wirth, Clemens},
  title     = {Klinische Wertigkeit der funktionellen Magnetresonanzurographie bei Kindern},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-72593},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {Die vorliegende retrospektive Arbeit zeigt die Einsatzm{\"o}glichkeiten der funktionellen Magnetresonanzurographie bei Kindern auf. Mit Hilfe der verwendeten Software lassen sich die funktionellen Aspekte der Untersuchung wenig zeitintensiv bearbeiten und die Ergebnisse anschaulich und verst{\"a}ndlich darstellen. Die Beurteilung der funktionellen Ergebnisse erlaubt aus der Zusammenschau von errechneten definierten metrischen Daten der Untersuchung und der Kurvenanalyse eine Aussage zur seitengetrennten Nierenfunktion. Diese korreliert gut mit dem klinischen Ergebnis und der MAG 3 Szintigraphie als Standardverfahren. Als Funktionsparameter zur Unterscheidung zwischen normal funktionierender und dekompensierter obstruierter Nierenuretereinheit dient in erster Linie die renale Transitzeit des Kontrastmittels RTT. Durch Einf{\"u}hrung einer Pseudonativsequenz konnten im Patientenkollektiv Untersuchungen der Auswertung zugef{\"u}hrt werden, die prim{\"a}r nicht auszuwerten waren. Eine Korrelation der errechneten Patlakzahl mit der gesch{\"a}tzten glomul{\"a}ren Filtrationsrate ließ sich in unserem Kollektiv nicht nachweisen. Insgesamt ist das Verfahren im klinischen Alltag weiter zu evaluieren, Prospektive Studien sollten eine eventuelle {\"U}berlegenheit dieser strahlenfreien Methode gegen{\"u}ber der Szintigraphie als zentrale Fragestellung {\"u}berpr{\"u}fen.},
  subject      = {Funktionelle NMR-Tomographie},
  language  = {de}
}