@misc{DandekarArgos1992, author = {Dandekar, Thomas and Argos, Patrick}, title = {Successive action of DnaK, DnaJ and GroEL along the pathway of chaperone-mediated protein folding}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-29814}, year = {1992}, abstract = {No abstract available}, language = {en} } @misc{DandekarArgos1991, author = {Dandekar, Thomas and Argos, Patrick}, title = {Chaperonin-mediated protein folding at the surface of groEL through a "molten globule" intermediate}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-29939}, year = {1991}, abstract = {No abstract available}, language = {en} } @article{DandekarBencurovaOsmanogluetal.2021, author = {Dandekar, Thomas and Bencurova, Elena and Osmanoglu, {\"O}zge and Naseem, Muhammad}, title = {Klimapflanzen und biologische Wege zu negativen Kohlendioxidemissionen}, series = {BIOspektrum}, volume = {27}, journal = {BIOspektrum}, number = {7}, issn = {1868-6249}, doi = {10.1007/s12268-021-1677-2}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-270067}, pages = {769-772}, year = {2021}, abstract = {Climate plants are critical to prevent global warming as all efforts to save carbon dioxide are too slow and climate disasters on the rise. For best carbon dioxide harvesting we compare algae, trees and crop plants and use metagenomic analysis of environmental samples. We compare different pathways, carbon harvesting potentials of different plants as well as synthetic modifications including carbon dioxide flux balance analysis. For implementation, agriculture and modern forestry are important.}, language = {de} } @misc{DandekarDandekar1994, author = {Dandekar, Thomas and Dandekar, G.}, title = {Schlange als Attribut des {\"A}skulap}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-29822}, year = {1994}, abstract = {No abstract available}, language = {de} } @article{DandekarEisenreich2015, author = {Dandekar, Thomas and Eisenreich, Wolfgang}, title = {Host-adapted metabolism and its regulation in bacterial pathogens}, series = {Frontiers in Cellular and Infection Microbiology}, volume = {5}, journal = {Frontiers in Cellular and Infection Microbiology}, number = {28}, issn = {2235-2988}, doi = {10.3389/fcimb.2015.00028}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-196876}, year = {2015}, abstract = {No abstract available.}, language = {en} } @article{DandekarFieselmannFischeretal.2014, author = {Dandekar, Thomas and Fieselmann, Astrid and Fischer, Eva and Popp, Jasmin and Hensel, Michael and Noster, Janina}, title = {Salmonella—how a metabolic generalist adopts an intracellular lifestyle during infection}, series = {Frontiers in Cellular and Infection Microbiology}, volume = {4}, journal = {Frontiers in Cellular and Infection Microbiology}, number = {191}, issn = {2235-2988}, doi = {10.3389/fcimb.2014.00191}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120686}, year = {2014}, abstract = {The human-pathogenic bacterium Salmonella enterica adjusts and adapts to different environments while attempting colonization. In the course of infection nutrient availabilities change drastically. New techniques, "-omics" data and subsequent integration by systems biology improve our understanding of these changes. We review changes in metabolism focusing on amino acid and carbohydrate metabolism. Furthermore, the adaptation process is associated with the activation of genes of the Salmonella pathogenicity islands (SPIs). Anti-infective strategies have to take these insights into account and include metabolic and other strategies. Salmonella infections will remain a challenge for infection biology.}, language = {en} } @article{DandekarFieselmannFischeretal.2015, author = {Dandekar, Thomas and Fieselmann, Astrid and Fischer, Eva and Popp, Jasmin and Hensel, Michael and Noster, Janina}, title = {Salmonella - how a metabolic generalist adopts an intracellular lifestyle during infection}, series = {Frontiers in Cellular and Infection Microbiology}, volume = {4}, journal = {Frontiers in Cellular and Infection Microbiology}, number = {191}, doi = {10.3389/fcimb.2014.00191}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-149029}, year = {2015}, abstract = {The human-pathogenic bacterium Salmonella enterica adjusts and adapts to different environments while attempting colonization. In the course of infection nutrient availabilities change drastically. New techniques, "-omics" data and subsequent integration by systems biology improve our understanding of these changes. We review changes in metabolism focusing on amino acid and carbohydrate metabolism. Furthermore, the adaptation process is associated with the activation of genes of the Salmonella pathogenicity islands (SPIs). Anti-infective strategies have to take these insights into account and include metabolic and other strategies. Salmonella infections will remain a challenge for infection biology.}, language = {en} } @article{DandekarFieselmannPoppetal.2012, author = {Dandekar, Thomas and Fieselmann, Astrid and Popp, Jasmin and Hensel, Michael}, title = {Salmonella enterica: a surprisingly well-adapted intracellular lifestyle}, series = {Frontiers in Microbiology}, journal = {Frontiers in Microbiology}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-123135}, year = {2012}, abstract = {The infectious intracellular lifestyle of Salmonella enterica relies on the adaptation to nutritional conditions within the Salmonella-containing vacuole (SCV) in host cells. We summarize latest results on metabolic requirements for Salmonella during infection. This includes intracellular phenotypes of mutant strains based on metabolic modeling and experimental tests, isotopolog profiling using (13)C-compounds in intracellular Salmonella, and complementation of metabolic defects for attenuated mutant strains towards a comprehensive understanding of the metabolic requirements of the intracellular lifestyle of Salmonella. Helpful for this are also genomic comparisons. We outline further recent studies and which analyses of intracellular phenotypes and improved metabolic simulations were done and comment on technical required steps as well as progress involved in the iterative refinement of metabolic flux models, analyses of mutant phenotypes, and isotopolog analyses. Salmonella lifestyle is well-adapted to the SCV and its specific metabolic requirements. Salmonella metabolism adapts rapidly to SCV conditions, the metabolic generalist Salmonella is quite successful in host infection.}, language = {en} } @article{DandekarGramschHoughtonetal.1985, author = {Dandekar, Thomas and Gramsch, Christian and Houghton, Richard A. and Schultz, R{\"u}diger}, title = {Affinity purification of \(\beta\)-endorphin-like material from NG108CC15 cells by means of the monoclonal \(\beta\)-endorphin antibody 3-E7}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-29896}, year = {1985}, abstract = {No abstract available}, language = {en} } @article{DandekarLiangKrueger2013, author = {Dandekar, Thomas and Liang, Chunguang and Kr{\"u}ger, Beate}, title = {GoSynthetic database tool to analyse natural and engineered molecular processes}, series = {Database}, journal = {Database}, doi = {10.1093/database/bat043}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-97023}, year = {2013}, abstract = {An essential topic for synthetic biologists is to understand the structure and function of biological processes and involved proteins and plan experiments accordingly. Remarkable progress has been made in recent years towards this goal. However, efforts to collect and present all information on processes and functions are still cumbersome. The database tool GoSynthetic provides a new, simple and fast way to analyse biological processes applying a hierarchical database. Four different search modes are implemented. Furthermore, protein interaction data, cross-links to organism-specific databases (17 organisms including six model organisms and their interactions), COG/KOG, GO and IntAct are warehoused. The built in connection to technical and engineering terms enables a simple switching between biological concepts and concepts from engineering, electronics and synthetic biology. The current version of GoSynthetic covers more than one million processes, proteins, COGs and GOs. It is illustrated by various application examples probing process differences and designing modifications.}, language = {en} }