@phdthesis{Proels2004,
  author    = {Pr{\"o}ls, Reinhard},
  title     = {Regulation and function of extracellular invertases of tomato},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-10260},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2004},
  abstract  = {Wachstum und Entwicklung pflanzlicher Gewebe bedingen eine fortw{\"a}hrende Ver{\"a}nderung von Source-Sink Beziehungen. Gewebe mit einem Nettoexport (Source) oder - import (Sink) von Kohlenhydraten m{\"u}ssen ihren aktuellen Bedarf an Assimilaten entsprechend dem Entwicklungsstadium anpassen. Dar{\"u}ber hinaus haben Pflanzen als ortsgebundene Lebewesen Regulationsmechanismen entwickelt, die eine flexible Antwort der Assimilatverteilung auf spezielle Anforderungen des Habitats, wie biotische oder abiotische Stressfaktoren und wechselnde Lichtbedingungen, erm{\"o}glichen. Die Assimilatverteilung ist vielf{\"a}ltig reguliert und erfordert spezifische Enzymfunktionen, wie Zuckertransporter und saccharosespaltende Enzyme. Extrazellul{\"a}re Invertasen nehmen eine essentielle Funktion in der apoplastischen Phloementladung und in der Regulation von Source-Sink {\"U}berg{\"a}ngen ein. Dies spiegelt sich in dem Auftreten verschiedener Invertase- Isoenzyme mit speziellen Expressions- und Regulationsmustern wider, welche eine Koordination des Kohlenhydratmetabolismus in unterschiedlichen Geweben, zu unterschiedlichen Entwicklungsstufen und unter sich {\"a}ndernden Umweltbedingungen erm{\"o}glichen. Ein detailliertes Wissen {\"u}ber die Funktion extrazellul{\"a}rer Invertasen k{\"o}nnte eingesetzt werden, um Wachstum, Entwicklung oder Pathogenresisitenz von Nutzpflanzen gezielt zu ver{\"a}ndern. In der vorliegenden Studie wurden die Regulationsmuster und die Funktion dreier extrazellul{\"a}rer Invertasen aus Tomate, Lin5, Lin6 und Lin7 untersucht. Durch umfangreiche Promotorstudien konnte eine gewebe- und entwicklungsspezifische Expression dieser Isoenzyme und entsprechende Regulationsmuster offengelegt werden. Lin5 zeigt eine entwicklungsabh{\"a}ngige Expression in Fr{\"u}chten. Lin6 wird in fr{\"u}hen Entwicklungsstadien, beginnend mit der Samenkeimung, exprimiert; in ausgewachsenen Pflanzen ist eine Lin6 Expression nur in Pollen oder nach Verwundungsinduktion nachweisbar. Lin7 wird ausschließlich in Tapetum-Gewebe und Pollen exprimiert. Die hormonelle Regulation der Isogene wurde im Detail untersucht, hierbei konnten bekannte Ph{\"a}notypen, welche durch Gibberellins{\"a}ure und Jasmonate bedingt werden, mit Invertasefunktionen in Korrelation gebracht werden. Dar{\"u}ber hinaus konnte in einem funktionalen Ansatz gezeigt werden, dass Lin7 eine wichtige Rolle in der Pollenkeimung zukommt. Die vorliegende Arbeit stellt die umfassendste Untersuchung extrazellul{\"a}rer Invertasen w{\"a}hrend der Bl{\"u}tenentwicklung dar, an der drei Isoenzyme aus Tomate beteiligt sind. Dadurch, dass den einzelnen Invertasen Lin5, Lin6 und Lin7 individuelle Funktionen zugewiesen werden konnten, er{\"o}ffnen sich neue Erkenntnisse {\"u}ber die Kohlenhydratversorgung w{\"a}hrend der Bl{\"u}ten- und Fruchtentwicklung. F{\"u}r die untersuchten gewebespezifischen Promotoren er{\"o}ffnen sich zudem Anwendungsm{\"o}glichkeiten in der Biotechnologie, was insbesondere f{\"u}r den pollenspezifischen Lin7 Promotor zutrifft. Es konnte gezeigt werden, dass der Lin6 Promotor das Ziel von hormon-, zucker- und verwundungsvermittelten Signalwegen ist. Dar{\"u}ber hinaus konnte nachgewiesen werden, dass Elemente des circadianen Oszillators von A. thaliana mit dem Lin6 Promotor funktionell interagieren und die Lin6 Expression einem diurnalen Rhythmus unterliegt. Dieses komplexe Regulationsmuster spiegelt sich in vielen cis-aktiven Elementen wider, die im Lin6 Promotor vorgefunden wurden. Durch dieses Merkmal wird die These gest{\"u}tzt, dass verschiedene Stimuli {\"u}ber die extrazellul{\"a}re Invertase integriert werden und so eine koordinierte Zellantwort auf sich {\"a}ndernde interne und externe Bedingungen erm{\"o}glicht wird. Nachdem Zuckermolek{\"u}le ihrerseits die Expression von Lin6 induzieren, wird dadurch eine Amplifikation von Signalen {\"u}ber eine positive R{\"u}ckkopplungsschleife erm{\"o}glicht. Die Vielzahl an cis-aktiven Elementen und deren Anordnung im Lin6 Promotor stellen ein ideales Modellsystem dar, um Fragen in Bezug auf Signalinteraktion und -integration zu untersuchen. In einer umfangreichen Studie wurde der Lin6 Promotor erfolgreich als induzierbares Expressionssystem eingesetzt. Hierbei wurde ein Invertaseinhibitor unter der Kontrolle des cytokinininduzierbaren Lin6 Promotors in transgenen Tabakpflanzen exprimiert. Mit diesem Ansatz ist es gelungen einen kausalen Zusammenhang zwischen dem Hormon Cytokinin und extrazellul{\"a}ren Invertasen in der Seneszenzverz{\"o}gerung herzustellen. Diese Studie zeigt, dass induzierbare Expressionssysteme essentiell sind, um spezifische Fragestellungen auf molekularer Ebene kl{\"a}ren zu k{\"o}nnen. Bei der Klonierung obig genannter Promotorsequenzen haben sich zudem zwei interessante strukturelle Besonderheiten ergeben. Zum einen sind die Gene von Lin5 und Lin7 in einem Tandem auf dem Genom angeordnet, zum anderen konnte eine Transposoninsertion im Intron I des Lin5 Gens gezeigt werden. Mit einem Primerpaar, das aus der Transposaseregion dieses Transposons abgeleitet wurde, konnten entsprechende Sequenzen von mehreren Solanaceae Spezies gewonnen werden.},
  subject      = {Tomate},
  language  = {en}
}
@phdthesis{Leide2008,
  author    = {Leide, Jana},
  title     = {Cuticular Wax Biosynthesis of Lycopersicon esculentum and Its Impact on Transpiration Barrier Properties during Fruit Development},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-34526},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2008},
  abstract  = {Cuticular waxes cover all above-ground growing parts of plants. They provide the outermost contact zone between plants and their environment and play a pivotal role in limiting transpirational water loss across the plant surface. The complex mechanisms in cuticular wax biosynthesis conferring proper barrier function still remain to be elucidated. The present study focuses on biosynthetic pathways in wax formation, cuticular wax accumulation and composition and its impact on the epidermal barrier property of the intact system of the astomatous tomato fruit (Lycopersicon esculentum Mill.). Fruits of all developmental stages of the wild type cultivar MicroTom and its lecer6 mutant defective in a \&\#946;-ketoacyl-CoA synthase involved in very-long-chain fatty acid elongation were analyzed. This 'reverse genetic' approach clarified the importance of the \&\#946;-ketoacyl-CoA synthase LeCER6 for epidermal barrier property in vivo on the biochemical-analytical level, on the transcriptional level and, furthermore, on the physiological level comparatively between MicroTom wild type and MicroTom lecer6. Surfaces of MicroTom wild type and MicroTom lecer6 fruits showed similar patterns of quantitative wax accumulation, but differed considerably in the permeance for water. Qualitative analyses of the chemical composition of fruit cuticular waxes in the course of fruit development revealed the meaning of the \&\#946;-ketoacyl-CoA synthase deficiency in the lecer6 mutant. Fruits of this mutant exhibited a distinct decrease in the proportion of n-alkanes of chain lengths > C28. Moreover, a concomitant increase in pentacyclic triterpenoids became discernible in the mature green fruit stage of the mutant. Since quantitative changes of the cutin matrix were not sufficient to affect transpiration barrier properties of the lecer6 mutant presumably the shift in cuticular wax biosynthesis of the lecer6 mutant is responsible for the observed increase of water permeance. In order to investigate the molecular basis of wax formation, a microarray experiment was established that allows the simultaneous and comprehensive analysis of the timing and abundance of transcriptional changes in MicroTom wild type and MicroTom lecer6. This microarray consists of 167 oligonucleotides corresponding to EST and gene sequences of tomato potentially participating in wax biosynthesis, wax modification, transport processes and stress responsiveness. These parameters were correlated with the course of fruit development. This comparison of gene expression patterns showed a variety of differential expressed transcripts encoding for example lipid transfer proteins and the dehydrin TAS14. On the basis of these findings, it can be proposed that diverse regulatory mechanisms like lipid transfer processes or osmotic stress response are affected by the LeCER6 deficiency, which is primarily accompanied by an impaired water barrier property of the fruit cuticle. This present study correlates the continuous increase of LeCer6 gene expression and the accumulation of very-long-chain n-alkanes within the cuticular waxes during the transition from the immature green to the early breaker fruit phase displaying a developmental regulation of the cuticular wax biosynthesis. Organ-specific wax biosynthesis resulted in different cuticular wax pattern in tomato fruits and leaves. Moreover, in contrast to the fruits, LeCER6-deficient leaves showed a significantly reduced wax accumulation, mainly due to a decrease of n-alkanes with chain lengths > C30, while the proportion of pentacyclic triterpenoids were not affected. Deduced from these biochemical-analytical data on tomato fruits and leaves LeCER6 was characterized as a key enzyme in VLCFA biosynthetic pathway responsible for cuticular wax accumulation. In silico analysis of the LeCER6 sequence revealed the presence of two putative transmembrane domains in the N-terminal position. In addition, highly conserved configurations of catalytic residues in the active site of the enzyme were observed, which are probably essential to its overall structure and function in the fatty acid elongation process. High sequence homology of LeCER6 to the very-long-chain condensing enzymes GhCER6 of Gossypium hirsutum L. and AtCER6 of Arabidopsis thaliana (L.) Heynh. was found, which might be a good evidence for similar biochemical functions. Apart from developmental regulation of the cuticular wax biosynthesis, environmental factors influenced the cuticular wax coverage of tomato fruits. Mechanical removal of epicuticular fruit wax evoked large-scale modifications of the quantitative and qualitative wax composition, such as a reduction of aliphatic wax components, and therewith affected the cuticular water permeability. A subsequent regeneration event was included in the regular wax biosynthesis process and led to the compensation of the detached wax amounts and increased the water barrier properties of the cuticular membrane again. In contrast, water-limited conditions had only minor impact on alterations in cuticular wax biosynthesis and, consequently, on the permeance for water of tomato fruits. Floral organ fusion and conditional sterility, as observed in this study, are caused as pleiotropic effects in cell-cell signaling by the loss-of-function mutation in LeCER6. These findings corroborated the functional impact of LeCER6 on the epidermal integrity and are consistent with the current knowledge on eceriferum mutants of Arabidopsis. Investigations of phenotypic and biochemical characteristics of tomato fruits allowed a broader system-orientated perspective of the fruit development of MicroTom wild type and its lecer6 mutant. These analyses highlight more precisely alterations in the fruit surface area, fresh and dry weight, epidermal cell density, photosynthetic activity or glucose content in the course of fruit development. The differences between MicroTom wild type and MicroTom lecer6 characterize very well the large-scale consequences of the LeCER6 deficiency on the physiological status of tomato fruits. Moreover, the results clearly show a part of the genetic controlled network that governs tomato fruit metabolism and mediates extensive changes of the tomato fruit life cycle. The analyses of the stem scar tissue of the tomato fruit revealed a complex set of responses caused by the harvesting process in detail. Throughout storage of the tomato fruits barrier properties were attributed to the suberized stem scar tissue in regard to water loss limitation and reduction of the fungal infection rate. Thereby the endogenous level of abscisic acid was found to be involved in the molecular signaling pathway that regulates the de novo formation of this tissue. For the first time, the chemical composition and physiological importance could be correlated with molecular changes at the transcriptional level during suberization of the stem scar of tomato fruits. In conclusion, this work indicates a novel intact model system for an integrative functional approach for plant barrier properties that was successfully established and carefully studied. The results highlight correlations between wax biosynthesis, distribution of cuticular waxes, and its relevance on the transpirational water loss across the plant surface and, thus, promote the global understanding of plant cuticle biology.},
  subject      = {Wachs},
  language  = {en}
}
@article{KaiserVoggFuerstetal.2015,
  author    = {Kaiser, Bettina and Vogg, Gerd and F{\"u}rst, Ursula B. and Albert, Markus},
  title     = {Parasitic plants of the genus Cuscuta and their interaction with susceptible and resistant host plants},
  series = {Frontiers in Plant Science},
  volume    = {6},
  journal   = {Frontiers in Plant Science},
  number    = {45},
  doi       = {10.3389/fpls.2015.00045},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-144091},
  year      = {2015},
  abstract  = {By comparison with plant microbe interaction, little is known about the interaction of parasitic plants with their hosts. Plants of the genus Cuscuta belong to the family of Cuscutaceae and comprise about 200 species, all of which live as stem holoparasites on other plants. Cuscuta spp. possess no roots nor fully expanded leaves and the vegetative portion appears to be a stem only. The parasite winds around plants and penetrates the host stems via haustoria, forming direct connections to the vascular bundles of their hosts to withdraw water, carbohydrates, and other solutes. Besides susceptible hosts, a few plants exist that exhibit an active resistance against infestation by Cuscuta spp. For example, cultivated tomato (Solanum lycopersicum) fends off Cuscuta reflexa by means of a hypersensitive-type response occurring in the early penetration phase. This report on the plant plant dialog between Cuscuta spp. and its host plants focuses on the incompatible interaction of C. reflexa with tomato.},
  language  = {en}
}
@phdthesis{Hofmann2003,
  author    = {Hofmann, Markus},
  title     = {Signal transduction during defense response and source-sink transition in tomato},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-5421},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2003},
  abstract  = {Plants have evolved an elaborate system to cope with a variety of biotic and abiotic stresses. Typically, under stress conditions an appropriate defense response is invoked which is accompanied by changes in the metabolic status of the plant. Photosynthesis is downregulated and sucrose is imported into the tissue, which provides a faster and more constant flux of energy and carbon skeletons to perform the defense response. Interestingly, these processes are co-ordinately regulated and the signal transduction chains underlying these cellular programs appear to share at least some common elements. Both the induction of sink metabolism and defense response is dependent on signal transduction pathways involving protein phosphorylation. Furthermore, regulation of extracellular invertase (INV) and phenylalanine ammonia lyase (PAL) which are markers for sink metabolism and defense response is preceded by the transient activation of MAP kinases. In depth analysis of MAP kinase activation by partial purification led to the discovery that, depending on the stimulus, different subsets of MAP kinases are activated. This differential MAPK activation is likely to possess a signal encoding function. In addition, the partial purification of MAP kinases was found to be suitable to address specific cellular functions to individual MAP kinase isoenzymes. By this way, LpWIPK was identified as the major MAP kinase activity induced after stimulation of tomato cells with different elicitors. LpWIPK is thus considered as a key regulator of defense response together with sink induction in tomato. A study using nonmetabolisable sucrose analogs revealed that the regulation of photosynthesis is not directly coupled to this signal transduction pathway since it is independent of MAP kinase activation. Nonetheless, downregulation is induced by the same stimuli that induce the defense response and sink metabolism and it will therefore be interesting to uncover the branch points of this signalling network in the future. MAP kinases are not only central components regulating the response to biotic stresses. In addition to e.g. pathogens, MAP kinases are as well involved in signal transduction events invoked by abiotic stresses like cold and drought. In a recent study, we could show that a MAP kinase is activated by heat stress, under conditions a plant will encounter in nature. This previously unknown MAP kinase is able to specifically recognise the heat stress transcription factor HsfA3 as a substrate, which supports a role of this MAP kinase in the regulation of the heat stress response. Moreover, the observation that HsfA3 is phosphorylated by the heat activated MAP kinase in vitro provides a promising basis to identify HsfA3 as the first physiological substrate of a plant MAP kinase. Intracellular protons have been implicated in the signal transduction of defense related signals. In a study using Chenopodium rubrum cells, we could show that cytosolic changes in pH values do not precede the regulation of the marker genes INV and PAL. Depending on the stimulus applied, cytosolic acidification or alkalinisation can be observed, which excludes a role for protons as signals in this pathway. Together with the concomitant changes of the pH value of the extracellular space, these variations can thus be considered as terminal part of the defense response itself rather than as a second messenger. WRKY transcription factors have only recently been identified as indirect targets of a central plant MAP kinase cascade. In addition, the identification of cognate binding sites in the promoters of INV and PAL supports a role for these proteins in the co-ordinate regulation of defense response and sink induction. A novel elicitor responsive WRKY transcription factor, LpWRKY1, was cloned from tomato and characterised with respect to its posttranslational modification. This immediate early transcription factor is transiently induced upon pathogen attack and the induction is dependent on phosphorylation. Furthermore, it was shown for the first time with respect to WRKY transcription factors, that LpWRKY1 is phosphorylated in vivo. Analysis of the role of this phosphorylation by in gel assays using recombinant WRKY protein as the substrate revealed two protein kinases that are transiently activated during the defense response to phosphorylate LpWRKY1. This data demonstrates that WRKY proteins require phosphorylation to modulate their DNA binding or transactivating activity.},
  language  = {en}
}