@article{UeceylerValetKafkeetal.2014, author = {{\"U}{\c{c}}eyler, Nurcan and Valet, Michael and Kafke, Waldemar and T{\"o}lle, Thomas R. and Sommer, Claudia}, title = {Local and Systemic Cytokine Expression in Patients with Postherpetic Neuralgia}, doi = {10.1371/journal.pone.0105269}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-113041}, year = {2014}, abstract = {Background Postherpetic neuralgia (PHN) is the painful complication of a varicella zoster virus reactivation. We investigated the systemic and local gene expression of pro- and anti-inflammatory cytokine expression in patients with PHN. Methods Thirteen patients with PHN at the torso (Th4-S1) were recruited. Skin punch biopsies were obtained from the painful and the contralateral painless body area for intraepidermal nerve fiber density (IENFD) and cytokine profiling. Additionally, blood was withdrawn for systemic cytokine expression and compared to blood values of healthy controls. We analyzed the gene expression of selected pro- and anti-inflammatory cytokines (tumor necrosis factor-alpha [TNF] and interleukins [IL]-1β, IL-2, and IL-8). Results IENFD was lower in affected skin compared to unaffected skin (p<0.05), while local gene expression of pro- and anti-inflammatory cytokines did not differ except for two patients who had 7fold higher IL-6 and 10fold higher IL-10 gene expression in the affected skin compared to the contralateral unaffected skin sample. Also, the systemic expression of cytokines in patients with PHN and in healthy controls was similar. Conclusion While the systemic and local expression of the investigated pro- and anti-inflammatory cytokines was not different from controls, this may have been influenced by study limitations like the low number of patients and different disease durations. Furthermore, other cytokines or pain mediators need to be considered.}, language = {en} } @article{UeceylerSommer2014, author = {{\"U}{\c{c}}eyler, Nurcan and Sommer, Claudia}, title = {High-Dose Capsaicin for the Treatment of Neuropathic Pain: What We Know and What We Need to Know}, series = {Pain and Therapy}, volume = {3}, journal = {Pain and Therapy}, number = {2}, issn = {2193-651X}, doi = {10.1007/s40122-014-0027-1}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120669}, pages = {73-84}, year = {2014}, abstract = {Neuropathic pain is a frequent and disabling condition with diverse underlying etiologies and is often difficult to treat. Systemic drug treatment is often limited in efficacy. Furthermore, adverse effects may be a limiting factor when trying to reach the necessary dose. Analgesics that can be applied topically have the potential to largely overcome this problem. They may be of particular advantage in localized neuropathic pain syndromes such as postherpetic neuralgia or small fiber neuropathy. Capsaicin, the pungent component of chili peppers, is a natural ligand of the transient receptor potential vanilloid 1 channel and has long been used as topically applicable cream with concentrations of 0.025 to 0.075\%. In 2009, a high-concentration transdermal capsaicin 8\% patch (Qutenza ; Acorda Therapeutics, Inc., Ardsley, NY, USA; Astellas Pharma Europe Ltd., Chertsey, Surrey, UK) was introduced for the treatment of peripheral neuropathic pain syndromes other than of diabetic origin in adults. It has since been widely used in diverse neuropathic pain disorders. In this review article, we summarize current knowledge on Qutenza, its advantages and problems, and expose unmet needs.}, language = {en} } @article{UeceylerKewenigKafkeetal.2014, author = {{\"U}{\c{c}}eyler, Nurcan and Kewenig, Susanne and Kafke, Waldemar and Kittel-Schneider, Sarah and Sommer, Claudia}, title = {Skin cytokine expression in patients with fibromyalgia syndrome is not different from controls}, doi = {10.1186/s12883-014-0185-0}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110624}, year = {2014}, abstract = {Background Fibromyalgia syndrome (FMS) is a chronic pain syndrome of unknown etiology. There is increasing evidence for small nerve fiber impairment in a subgroup of patients with FMS. We investigated whether skin cytokine and delta opioid receptor (DOR) gene expression in FMS patients differs from controls as one potential contributor to small nerve fiber sensitization. Methods We investigated skin punch biopsies of 25 FMS patients, ten patients with monopolar depression but no pain, and 35 healthy controls. Biopsies were obtained from the lateral upper thigh and lower calf. Gene expression of the pro-inflammatory cytokines tumor necrosis factor-alpha (TNF), interleukin (IL)-6, and IL-8 and of the anti-inflammatory cytokine IL-10 was analyzed using quantitative real-time PCR and normalizing data to 18sRNA as housekeeping gene. Additionally, we assessed DOR gene expression. Results All cytokines and DOR were detectable in skin samples of FMS patients, patients with depression, and healthy controls without intergroup difference. Also, gene expression was not different in skin of the upper and lower leg within and between the groups and in FMS patient subgroups. Conclusions Skin cytokine and DOR gene expression does not differ between patients with FMS and controls. Our results do not support a role of the investigated cytokines in sensitization of peripheral nerve fibers as a potential mechanism of small fiber pathology in FMS.}, language = {en} } @article{UeceylerHomolaGonzalezetal.2014, author = {{\"U}{\c{c}}eyler, Nurcan and Homola, Gy{\"o}rgy A. and Gonz{\´a}lez, Hans Guerrero and Kramer, Daniela and Wanner, Christoph and Weidemann, Frank and Solymosi, L{\´a}szl{\´o} and Sommer, Claudia}, title = {Increased Arterial Diameters in the Posterior Cerebral Circulation in Men with Fabry Disease}, doi = {10.1371/journal.pone.0087054}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112614}, year = {2014}, abstract = {A high load of white matter lesions and enlarged basilar arteries have been shown in selected patients with Fabry disease, a disorder associated with an increased stroke risk. We studied a large cohort of patients with Fabry disease to differentially investigate white matter lesion load and cerebral artery diameters. We retrospectively analyzed cranial magnetic resonance imaging scans of 87 consecutive Fabry patients, 20 patients with ischemic stroke, and 36 controls. We determined the white matter lesion load applying the Fazekas score on fluid-attenuated inversion recovery sequences and measured the diameters of cerebral arteries on 3D-reconstructions of the time-of-flight-MR-angiography scans. Data of different Fabry patient subgroups (males - females; normal - impaired renal function) were compared with data of patients with stroke and controls. A history of stroke or transient ischemic attacks was present in 4/30 males (13\%) and 5/57 (9\%) females with Fabry disease, all in the anterior circulation. Only one man with Fabry disease showed confluent cerebral white matter lesions in the Fazekas score assessment (1\%). Male Fabry patients had a larger basilar artery (p<0.01) and posterior cerebral artery diameter (p<0.05) compared to male controls. This was independent of disease severity as measured by renal function and did not lead to changes in arterial blood flow properties. A basilar artery diameter of >3.2 mm distinguished between men with Fabry disease and controls (sensitivity: 87\%, specificity: 86\%, p<0.001), but not from stroke patients. Enlarged arterial diameters of the posterior circulation are present only in men with Fabry disease independent of disease severity.}, language = {en} } @phdthesis{Zusan2014, author = {Zusan, Andreas}, title = {The Effect of Morphology on the Photocurrent Generation in Organic Solar Cells}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117852}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Organic solar cells have great potential to become a low-cost and clean alternative to conventional photovoltaic technologies based on the inorganic bulk material silicon. As a highly promising concept in the field of organic photovoltaics, bulk heterojunction (BHJ) solar cells consist of a mixture of an electron donating and an electron withdrawing component. Their degree of intermixing crucially affects the generation of photocurrent. In this work, the effect of an altered blend morphology on polaron pair dissociation, charge carrier transport, and nongeminate recombination is analyzed by the charge extraction techniques time delayed collection field (TDCF) and open circuit corrected transient charge extraction (OTRACE). Different comparative studies cover a broad range of material systems, including polymer and small-molecule donors in combination with different fullerene acceptors. The field dependence of polaron pair dissociation is analyzed in blends based on the polymer pBTTT-C16, allowing a systematic tuning of the blend morphology by varying the acceptor type and fraction. The effect of both excess photon energy and intercalated phases are minor compared to the influence of excess fullerene, which reduces the field dependence of photogeneration. The study demonstrates that the presence of neat fullerene domains is the major driving force for efficient polaron pair dissociation that is linked to the delocalization of charge carriers. Furthermore, the influence of the processing additive diiodooctane (DIO) is analyzed using the photovoltaic blends PBDTTT-C:PC71BM and PTB7:PC71BM. The study reveals amulti-tiered alteration of the blend morphology of PBDTTT-C based blends upon a systematic increase of the amount of DIO. Domains on the hundred nanometers length scale in the DIO-free blend are identified as neat fullerene agglomerates embedded in an intermixed matrix. With the addition of the additive, 0.6\% and 1\% DIO already substantially reduces the size of these domains until reaching the optimum 3\% DIO mixture, where a 7.1\% power conversion efficiency is obtained. It is brought into connection with the formation of interpenetrating polymer and fullerene phases. Similar to PBDTTT-C, the morphology of DIO-free PTB7:PC71BM blends is characterized by large fullerene domains being decreased in size upon the addition of 3\% DIO. OTRACE measurements reveal a reduced Langevin-type, super-second order recombination in both blends. It is demonstrated that the deviation from bimolecular recombination kinetics cannot be fully attributed to the carrier density dependence of the mobility but is rather related to trapping in segregated PC71BM domains. Finally, with regard to small-molecule donors, a higher yield of photogeneration and balanced transport properties are identified as the dominant factors enhancing the efficiency of vacuum deposited MD376:C60 relative to its solution processed counterpart MD376:PC61BM. The finding is explained by a higher degree of dimerization of the merocyanine dye MD376 and a stronger donor-acceptor interaction at the interface in the case of the vacuum deposited blend.}, subject = {Organische Solarzelle}, language = {en} } @article{ZukherNovikovaTikhonovetal.2014, author = {Zukher, Inna and Novikova, Maria and Tikhonov, Anton and Nesterchuk, Mikhail V. and Osterman, Ilya A. and Djordjevic, Marko and Sergiev, Petr V. and Sharma, Cynthia M. and Severinov, Konstantin}, title = {Ribosome-controlled transcription termination is essential for the production of antibiotic microcin C}, series = {Nucleic Acids Research}, volume = {42}, journal = {Nucleic Acids Research}, number = {19}, issn = {0305-1048}, doi = {10.1093/nar/gku880}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114839}, pages = {11891-11902}, year = {2014}, abstract = {Microcin C (McC) is a peptide-nucleotide antibiotic produced by Escherichia coli cells harboring a plasmid-borne operon mccABCDE. The heptapeptide MccA is converted into McC by adenylation catalyzed by the MccB enzyme. Since MccA is a substrate for MccB, a mechanism that regulates the MccA/MccB ratio likely exists. Here, we show that transcription from a promoter located upstream of mccA directs the synthesis of two transcripts: a short highly abundant transcript containing the mccA ORF and a longer minor transcript containing mccA and downstream ORFs. The short transcript is generated when RNA polymerase terminates transcription at an intrinsic terminator located in the intergenic region between the mccA and mccB genes. The function of this terminator is strongly attenuated by upstream mcc sequences. Attenuation is relieved and transcription termination is induced when ribosome binds to the mccA ORF. Ribosome binding also makes the mccA RNA exceptionally stable. Together, these two effects-ribosome induced transcription termination and stabilization of the message-account for very high abundance of the mccA transcript that is essential for McC production. The general scheme appears to be evolutionary conserved as ribosome-induced transcription termination also occurs in a homologous operon from Helicobacter pylori.}, language = {en} } @article{ZugmaierToppAlekaretal.2014, author = {Zugmaier, G. and Topp, M. S. and Alekar, S. and Viardot, A. and Horst, H.-A. and Neumann, S. and Stelljes, M. and Bargou, R. C. and Goebeler, M. and Wessiepe, D. and Degenhard, E. and Goekbuget, N. and Klinger, M.}, title = {Long-term follow-up of serum immunoglobulin levels in blinatumomab-treated patients with minimal residual disease-positive B-precursor acute lymphoblastic leukemia}, series = {Blood Cancer Journal}, volume = {4}, journal = {Blood Cancer Journal}, number = {e244}, issn = {2044-5385}, doi = {10.1038/bcj.2014.64}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-115433}, year = {2014}, abstract = {No abstract available.}, language = {en} } @phdthesis{Zude2014, author = {Zude, Ingmar}, title = {Characterization of virulence-associated traits of Escherichia coli bovine mastitis isolates}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-100934}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Bacterial mastitis is caused by invasion of the udder, bacterial multiplication and induction of inflammatory responses in the bovine mammary gland. Disease severity and the cause of disease are influenced by environmental factors, the cow's immune response as well as bacterial traits. Escherichia coli (E. coli) is one of the main causes of acute bovine mastitis, but although pathogenic E. coli strains can be classified into different pathotypes, E. coli causing mastitis cannot unambiguously be distinguished from commensal E. coli nor has a common set of virulence factors been described for mastitis isolates. This project focussed on the characterization of virulence- associated traits of E. coli mastitis isolates in comprehensive analyses under conditions either mimicking initial pathogenesis or conditions that E. coli mastitis isolates should encounter while entering the udder. Virulence-associated traits as well as fitness traits of selected bovine mastitis or faecal E. coli strains were identified and analyzed in comparative phenotypic assays. Raw milk whey was introduced to test bacterial fitness in native mammary secretion known to confer antimicrobial effects. Accordingly, E. coli isolates from bovine faeces represented a heterogeneous group of which some isolates showed reduced ability to survive in milk whey whereas others phenotypically resembled mastitis isolates that represented a homogeneous group in that they showed similar survival and growth characteristics in milk whey. In contrast, mastitis isolates did not exhibit such a uniform phenotype when challenged with iron shortage, lactose as sole carbon source and lingual antimicrobial peptide (LAP) as a main defensin of milk. Reduced bacterial fitness could be related to LAP suggesting that bacterial adaptation to an intramammary lifestyle requires resistance to host defensins present in mammary secretions, at least LAP. E. coli strain 1303 and ECC-1470 lack particular virulence genes associated to mastitis isolates. To find out whether differences in gene expression may contribute to the ability of E. coli variants to cause mastitis, the transcriptome of E. coli model mastitis isolates 1303 and ECC-1470 were analyzed to identify candidate genes involved in bacterium-host interaction, fitness or even pathogenicity during bovine mastitis. DNA microarray analysis was employed to assess the transcriptional response of E. coli 1303 and ECC-1470 upon cocultivation with MAC-T immortalized bovine mammary gland epithelial cells to identify candidate genes involved in bacterium-host interaction. Additionally, the cell adhesion and invasion ability of E. coli strain 1303 and ECC-1470 was investigated. The transcriptonal response to the presence of host cells rather suggested competition for nutrients and oxygen between E. coli and MAC-T cells than marked signs of adhesion and invasion. Accordingly, mostly fitness traits that may also contribute to efficient colonization of the E. coli primary habitat, the gut, have been utilized by the mastitis isolates under these conditions. In this study, RNA-Seq was employed to assess the bacterial transcriptional response to milk whey. According to our transcriptome data, the lack of positively deregulated and also of true virulence-associated determinants in both of the mastitis isolates indicated that E. coli might have adapted by other means to the udder (or at least mammary secretion) as an inflammatory site. We identified traits that promote bacterial growth and survival in milk whey. The ability to utilize citrate promotes fitness and survival of E. coli that are thriving in mammary secretions. According to our results, lactoferrin has only weak impact on E. coli in mammary secretions. At the same time bacterial determinants involved in iron assimilation were negatively regulated, suggesting that, at least during the first hours, iron assimilation is not a challenge to E. coli colonizing the mammary gland. It has been hypothesized that cellular iron stores cause temporary independency to extracellular accessible iron. According to our transcriptome data, this hypothesis was supported and places iron uptake systems beyond the speculative importance that has been suggested before, at least during early phases of infection. It has also been shown that the ability to resist extracytoplasmic stress, by oxidative conditions as well as host defensins, is of substantial importance for bacterial survival in mammary secretions. In summary, the presented thesis addresses important aspects of host-pathogen interaction and bacterial conversion to hostile conditions during colonization of the mastitis inflammatory site, the mammary gland.}, subject = {Escherichia coli}, language = {en} } @phdthesis{Zubrod2014, author = {Zubrod, Ann-Katrin}, title = {Etablierung des kathetergest{\"u}tzten Aortenklappenersatzverfahrens (TAVI) an der Universit{\"a}tsklinik W{\"u}rzburg}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114611}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Ziel dieser Studie ist die Darstellung des kurz- und mittelfristigen Outcomes von Hochrisiko-Patienten mit symptomatischer hochgradiger Aortenstenose nach TAVI sowie im Speziellen die Untersuchung des Outcomes von Patienten mit Low-Gradient-Aortenstenose nach TAVI. Methoden: 50 Patienten (TAVI-Gruppe) wurde eine Aortenklappe {\"u}ber einen transapikalen (49 Patienten)- beziehungsweise transfemoralen (1 Patient) Zugangsweg implantiert. Es wurden perioperative- sowie unmittelbar postoperative und mittelfristige Daten nach 6 Monaten ermittelt. Dabei f{\"u}hrten wir eine konventionelle- und spezielle echokardiographische Untersuchung-, den Lebensqualit{\"a}tsfragebogen SF-36- sowie einen 6-Minuten-Gehtest durch und befragten die Patienten nach ihrem subjektiven Empfinden und Symptomatik. Eine Kontroll-Gruppe, die ebenfalls Hochrisiko-Patienten mit symptomatischer hochgradiger Aortenstenose beinhaltete, wurde konservativ-medikament{\"o}s therapiert und diente als Vergleichsgruppe. Zur n{\"a}heren Untersuchung der Patienten mit Low-Gradient-Aortenstenose unterteilten wir die TAVI-Gruppe in LG-AS und HG-AS und bestimmten deren Outcome nach 6 Monaten. Ergebnisse: Bei allen Patienten konnte die Aortenklappe erfolgreich implantiert werden. Die 30-Tages-Mortalit{\"a}t lag bei 4,0\%, die Mortalit{\"a}t nach 6 Monaten bei 12\%. Die echokardiographischen Untersuchungen ergaben im Follow-up eine signifikante Verbesserung der h{\"a}modynamischen Funktion (AVA: 0,69±0,15cm2 vs. 2,27±2,15cm2, mittlerer aortaler Druckgradient: 54,4±15,3mmHg vs. 13,3±5,5mmHg, maximale aortale Geschwindigkeit: 4,5±0,6m/s vs. 2,3±0,5m/s). Die Patienten zeigten 6 Monate nach TAVI eine signifikante Verbesserung der Lebensqualit{\"a}t, der Gehstrecke (189,4m vs. 362,9m) sowie eine subjektive Verbesserung ihrer Beschwerden. Die Patienten mit LG-AS hatten eine h{\"o}here Mortalit{\"a}t als Patienten ohne LG-AS (21.4\% vs. 8,3\%), die {\"u}berlebenden Patienten zeigten jedoch ebenfalls eine signifikante Verbesserung der h{\"a}modynamischen Funktion, der Lebensqualit{\"a}t und der Gehstrecke. Zusammenfassung: Diese Daten belegen gute kurz- und mittelfristige Ergebnisse bei Hochrisiko-Patienten nach TAVI und stellen eine Alternative zur konventionellen Therapie dar. Die Mortalit{\"a}t nach 6 Monaten war in der TAVI-Gruppe signifikant geringer als in der Kontroll-Gruppe, die myokardiale Funktion verbesserte sich und ein symptomatischer Benefit konnte gezeigt werden. Es wurde bei Patienten mit LG-AS eine h{\"o}here Mortalit{\"a}t erfasst, die {\"u}berlebenden Patienten zeigten jedoch eine signifikante Verbesserung der myokardialen Funktion, der Ausdauerf{\"a}higkeit sowie eine signifikant verbesserte Lebensqualit{\"a}t.}, subject = {TAVI}, language = {de} } @phdthesis{ZitzlerKunkel2014, author = {Zitzler-Kunkel, Andr{\´e}}, title = {Funktionale Merocyaninfarbstoffe: Synthese, molekulare und Selbstorganisationseigenschaften sowie ihre Anwendung in der organischen Photovoltaik}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-101536}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Analog zu den auf hochgeordneten Farbstoffarchitekturen in den biologischen Photosyntheseapparaten basierenden Energiekonversionssystemen sollte die exakte Einstellung zwischenmolekularer Wechselwirkungen auch in k{\"u}nstlichen Halbleitern eine entscheidende Rolle f{\"u}r die Weiterentwicklung organischer Elektronikmaterialien spielen. F{\"u}r eine derartige, pr{\"a}zise Steuerung der nanoskaligen Anordnung in organischen Materialien erscheinen Merocyaninfarbstoffe wegen ihrer hochgerichteten, dipolaren Aggregation {\"a}ußerst aussichtsreich. In diesem Zusammenhang war das Ziel der vorliegenden Arbeit die Ausnutzung funktionaler, stark selbstorganisierender Merocyanine, um eine gezielte Beeinflussung der Morphologie in der aktiven Schicht von BHJ-Solarzellen zu erreichen. Hierzu sollte zun{\"a}chst eine umfangreiche Serie komplexer Merocyanine synthetisiert und vollst{\"a}ndig charakterisiert werden. Im Folgenden wurde angestrebt, die optischen und elektrochemischen Eigenschaften der molekular gel{\"o}sten Farbstoffe zu bestimmen und f{\"u}r ausgew{\"a}hlte, geeignete Strukturen das Selbstorganisationsverhalten im Detail zu studieren. Zuletzt sollte durch eine sorgf{\"a}ltige Optimierung der Prozessierungsbedingungen ein Transfer der in L{\"o}sung gefundenen, supramolekularen Strukturen in den Blend l{\"o}sungsprozessierter BHJ-Solarzellen erreicht werden. Die organischen Elektronikbauteile wurden dabei im Arbeitskreis von Prof. Dr. Klaus Meerholz (Universit{\"a}t K{\"o}ln) gefertigt und charakterisiert. Zusammenfassend zeichnet die vorliegende Arbeit ein umfassendes Bild von der Synthese funktionaler Merocyanine, dem Studium ihrer molekularen und Selbstorganisationseigenschaften sowie ihrer Anwendung als p-Halbleitermaterialien in organischen Solarzellen. Der komplexe Molek{\"u}laufbau der dargestellten Farbstoffe f{\"u}hrte dabei zur Ausbildung verschiedener Farbstofforganisate, deren Struktur sowohl in L{\"o}sung als auch teilweise im Festk{\"o}rper aufgekl{\"a}rt werden konnte. Die erfolgreiche Implementierung von H-aggregierten Spezies der Verbindung 67b in die aktive Schicht organischer BHJ-Solarzellen resultierte in der Bildung effizienter Perkolationspfade f{\"u}r Exzitonen und freie Ladungstr{\"a}ger, wodurch diese Bauteile merklich h{\"o}here Stromdichten generieren konnten und gegen{\"u}ber Zellen ohne H-Spezies {\"u}ber 20 \% gesteigerte Effizienz aufwiesen. Diese Befunde verifizieren die postulierte Hypothese, dass eine gezielte Einstellung der zwischenmolekularen Wechselwirkungen bei organischen Halbleitern zu einer Optimierung der Funktionalit{\"a}t organischer Elektronikmaterialien beitragen kann.}, subject = {Merocyanine}, language = {de} } @phdthesis{Zinser2014, author = {Zinser, Madeleine}, title = {Herstellung monoklonaler Antik{\"o}rper gegen das von Aspergillus fumigatus produzierte Gift Gliotoxin}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-98419}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Diese Arbeit befasst sich mit der Herstellung monoklonaler Antik{\"o}rper gegen Gliotoxin und eine Charakterisierung der Eigenschaften dieser Antik{\"o}rper sowie ihrer Fab-Fragmente im ELISA sowie in Zellkulturen. Insgesamt konnten f{\"u}nf monoklonale Antik{\"o}rper generiert werden, die spezifisch f{\"u}r das Mykotoxin Gliotoxin waren.}, subject = {Gliotoxin}, language = {de} } @article{ZinmanInzucchiLachinetal.2014, author = {Zinman, Bernard and Inzucchi, Silvio E. and Lachin, John M. and Wanner, Christoph and Ferrari, Roberto and Fitchett, David and Bluhmki, Erich and Hantel, Stefan and Kempthorne-Rawson, Joan and Newman, Jennifer and Johansen, Odd Erik and Woerle, Hans-Juergen and Broedl, Uli C.}, title = {Rationale, design, and baseline characteristics of a randomized, placebo-controlled cardiovascular outcome trial of empagliflozin (EMPA-REG OUTCOME (TM))}, series = {Cardiovascular Diabetology}, volume = {13}, journal = {Cardiovascular Diabetology}, number = {102}, issn = {1475-2840}, doi = {10.1186/1475-2840-13-102}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-116036}, year = {2014}, abstract = {Background: Evidence concerning the importance of glucose lowering in the prevention of cardiovascular (CV) outcomes remains controversial. Given the multi-faceted pathogenesis of atherosclerosis in diabetes, it is likely that any intervention to mitigate this risk must address CV risk factors beyond glycemia alone. The SGLT-2 inhibitor empagliflozin improves glucose control, body weight and blood pressure when used as monotherapy or add-on to other antihyperglycemic agents in patients with type 2 diabetes. The aim of the ongoing EMPA-REG OUTCOME (TM) trial is to determine the long-term CV safety of empagliflozin, as well as investigating potential benefits on macro-/microvascular outcomes. Methods: Patients who were drug naive (HbA(1c) >= 7.0\% and <= 9.0\%), or on background glucose-lowering therapy (HbA(1c) >= 7.0\% and <= 10.0\%), and were at high risk of CV events, were randomized (1:1:1) and treated with empagliflozin 10 mg, empagliflozin 25 mg, or placebo (double blind, double dummy) superimposed upon the standard of care. The primary outcome is time to first occurrence of CV death, non-fatal myocardial infarction, or non-fatal stroke. CV events will be prospectively adjudicated by an independent Clinical Events Committee. The trial will continue until >= 691 confirmed primary outcome events have occurred, providing a power of 90\% to yield an upper limit of the adjusted 95\% CI for a hazard ratio of <1.3 with a one-sided a of 0.025, assuming equal risks between placebo and empagliflozin (both doses pooled). Hierarchical testing for superiority will follow for the primary outcome and key secondary outcomes (time to first occurrence of CV death, non-fatal myocardial infarction, non-fatal stroke or hospitalization for unstable angina pectoris) where non-inferiority is achieved. Results: Between Sept 2010 and April 2013, 592 clinical sites randomized and treated 7034 patients (41\% from Europe, 20\% from North America, and 19\% from Asia). At baseline, the mean age was 63 +/- 9 years, BMI 30.6 +/- 5.3 kg/m(2), HbA1c 8.1 +/- 0.8\%, and eGFR 74 +/- 21 ml/min/1.73 m(2). The study is expected to report in 2015. Discussion: EMPA REG OUTCOME (TM) will determine the CV safety of empagliflozin in a cohort of patients with type 2 diabetes and high CV risk, with the potential to show cardioprotection.}, language = {en} } @phdthesis{Zimmermann2014, author = {Zimmermann, Sabine Annette}, title = {Mechanisch stabile Magnesiumphosphatsch{\"a}ume und deren Zytokompatibilit{\"a}t}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114055}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Magnesiumphosphatsch{\"a}ume nehmen auf Grund ihrer guten Resorbierbarkeit, unter physiologischen Bedingungen, einen immer gr{\"o}ßeren Stellenwert als Knochenersatzmaterial ein. Ein weiterer Vorteil ist der neutrale pH-Wert den das entstehende Material besitzt. Magnesiumphosphatsch{\"a}ume besitzen eine hochpor{\"o}se offenporige Struktur um zum einen den Knochen nachzuahmen und zum anderen die Steuerung und Bildung von Knochengewebe zu erm{\"o}glichen. In der vorliegenden Arbeit wurden die mechanischen Eigenschaften als auch die Zytokompatibilit{\"a}t der hergestellten Sch{\"a}ume untersucht. Es wurden unterschiedliche Herstellungsverfahren genutzt um Magnesiumphosphatsch{\"a}ume zu erhalten. Zum einen das Replika- Verfahren, die dabei entstandenen Farringtonit Sch{\"a}ume (Mg3(PO4)2, Farringtonit) wurden zu Struvit ((NH4)Mg(PO4)•6H2O) umgewandelt bzw. mit PLGA infiltriert und auf ihre mechanische Eigenschaften hin untersucht. Zum anderen wurde ein proteinbasierter Schaumbildner verwendet. Die Zytokompatibilit{\"a}tspr{\"u}fung wurde mit der Osteosarkomzelllinie MG-63 durchgef{\"u}hrt. Es erfolgte die Untersuchung der Zellproliferation und der Zellaktivit{\"a}t (WST). Zudem wurden Proben mittels Licht- und Elektronenmikroskopie analysiert. Die Feststellung der Proteinexpression erfolgte nach gelelektrophoretischer Auftrennung mittels Western Blot und PCR Analyse.}, subject = {Magnesiumphosphate}, language = {de} } @phdthesis{Zilian2014, author = {Zilian, David}, title = {Neuartige, empirische Scoring-Modelle f{\"u}r Protein-Ligand-Komplexe und computergest{\"u}tzte Entwicklung von Hsp70-Inhibitoren}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-105055}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Techniken des computergest{\"u}tzten Wirkstoffdesigns spielen eine wichtige Rolle bei der Entwicklung neuer Wirkstoffe. Die vorliegende Arbeit befasst sich sowohl mit der Entwicklung als auch mit der praktischen Anwendung von Methoden des strukturbasierten Wirkstoffdesigns. Die Arbeit glieder sich daher in zwei Teile. Der erste Teil besch{\"a}ftigt sich mit der Entwicklung von empirischen Scoring-Funktionen, die eine Schl{\"u}sselrolle im strukturbasierten computergest{\"u}tzen Wirkstoffdesign einnehmen. Grundlage dieser Arbeiten sind die empirischen Deskriptoren und Scoring-Funktionen aus dem SFCscore-Programmpaket. Dabei wurde zun{\"a}chst untersucht, wie sich die Zusammensetzung der Trainingsdaten auf die Vorhersagen von empirischen Scoring-Funktionen auswirkt. Durch die gezielte Zusammenstellung eines neuen Trainingsdatensatzes wurde versucht, die Spannweite der Vorhersagen zu vergr{\"o}ßern, um so vor allem eine bessere Erkennung von hoch- und niedrig-affinen Komplexen zu erreichen. Die resultierende Funktion erzielte vor allem im niedrig-affinen Bereich verbesserte Vorhersagen. Der zweite Themenkomplex besch{\"a}ftigt sich ebenfalls mit der verbesserten Separierung von aktiven und inaktiven Verbindungen. Durch den Einsatz der Machine Learning-Methode RandomForest wurden dazu Klassifizierungsmodelle abgeleitet, die im Unterschied zu den klassischen Scoring-Funktionen keinen genauen Score liefern, sondern die Verbindungen nach ihrer potentiellen Aktivit{\"a}t klassifizieren. Am Beispiel des mykobakteriellen Enzyms InhA konnte gezeigt werden, dass derartige Modelle den klassischen Scoring-Funktionen im Bezug auf die Erkennung von aktiven Verbindungen deutlich {\"u}berlegen sind. Der RandomForest-Algorithmus wurde im n{\"a}chsten Schritt auch verwendet, um eine neue Scoring-Funktion zur Vorhersage von Bindungsaffinit{\"a}ten abzuleiten. Diese Funktion wurde unter dem Namen SFCscoreRF in das SFCscore-Programmpaket implementiert. Die Funktion unterschiedet sich in einigen wesentlichen Punkten von den urspr{\"u}nglichen SFCscore-Funktionen. Zum einen handelt es sich beim RF-Algorithmus um eine nicht-lineare Methode, die im Unterschied zu den klassischen Methoden, die zur Ableitung von Scoring-Funktionen eingesetzt werden, nicht von der Additivit{\"a}t der einzelnen Deskriptoren ausgeht. Der Algorithmus erlaubt außerdem die Verwendung aller verf{\"u}gbaren SFCscore-Deskriptoren, was eine deutlich umfassendere Repr{\"a}sentation von Protein-Ligand-Komplexen als Grundlage des Scorings erm{\"o}glicht. F{\"u}r die Ableitung von SFCscoreRF wurden insgesamt 1005 Komplexe im Trainingsdatensatz verwendet. Dieser Datensatz ist somit einer der gr{\"o}ßten, die bisher f{\"u}r die Ableitung einer empirischen Scoring-Funktion verwendet wurden. Die Evaluierung gegen zwei Benchmark-Datens{\"a}tze ergab deutlich bessere Vorhersagen von SFCscoreRF im Vergleich zu den urspr{\"u}nglichen SFCscore-Funktionen. Auch im internationalen Vergleich mit anderen Scoring-Funktion konnten f{\"u}r beide Datens{\"a}tze Spitzenwerte erreicht werden. Weitere ausgiebige Testungen im Rahmen einer Leave-Cluster-Out-Validierung und die Teilnahme am CSAR 2012 Benchmark Exercise ergaben, dass auch SFCscoreRF Performanceschwankungen bei der Anwendung an proteinspezifischen Datens{\"a}tzen zeigt - ein Ph{\"a}nomen, dass bei Scoring-Funktionen immer beobachtet wird. Die Analyse der CSAR 2012-Datens{\"a}tze ergab dar{\"u}ber hinaus wichtige Erkenntnisse im Bezug auf Vorhersage von gedockten Posen sowie {\"u}ber die statistische Signifikanz bei der Evaluierung von Scoring-Funktionen. Die Tatsache, dass empirische Scoring-Funktionen innerhalb eines bestimmten chemischen Raums trainiert wurden, ist ein wichtiger Faktor f{\"u}r die protein-abh{\"a}ngigen Leistungsschwankungen, die in dieser Arbeit beobachtet wurden. Verl{\"a}ssliche Vorhersagen sind nur innerhalb des kalibrierten chemischen Raums m{\"o}glich. In dieser Arbeit wurden verschiedene Ans{\"a}tze untersucht, mit denen sich diese ``Applicability Domain'' f{\"u}r die SFCscore-Funktionen definieren l{\"a}sst. Mit Hilfe von PCA-Analysen ist es gelungen die ``Applicability Domain'' einzelner Funktionen zu visualisieren. Zus{\"a}tzlich wurden eine Reihe numerischer Deskriptoren getestet, mit den die Vorhersageverl{\"a}sslichkeit basierend auf der ``Applicability Domain'' abgesch{\"a}tzt werden k{\"o}nnte. Die RF-Proximity hat sich hier als vielversprechender Ausgangspunkt f{\"u}r weitere Entwicklungen erwiesen. Der zweite Teil der Arbeit besch{\"a}ftigt sich mit der Entwicklung neuer Inhibitoren f{\"u}r das Chaperon Hsp70, welches eine vielversprechende Zielstruktur f{\"u}r die Therapie des multiplen Myeloms darstellt. Grundlage dieser Arbeiten war eine Leitstruktur, die in einer vorhergehenden Arbeit entdeckt wurde und die vermutlich an einer neuartigen Bindestelle in der Interface-Region zwischen den beiden großen Dom{\"a}nen von Hsp70 angreift. Die Weiterentwicklung und Optimierung dieser Leitstruktur, eines Tetrahydroisochinolinon-Derivats, stand zun{\"a}chst im Vordergrund. Anhand detaillierter Docking-Analysen wurde der potentielle Bindemodus der Leitstruktur in der Interfaceregion von Hsp70 untersucht. Basierend auf diesen Ergebnissen wurde eine Substanzbibliothek erstellt, die von Kooperationspartnern innerhalb der KFO 216 synthetisiert und biologisch getestet wurde. Die Struktur-Wirkungsbeziehungen, die sich aus diesen experimentellen Daten ableiten lassen, konnten teilweise gut mit den erstellten Docking-Modellen korreliert werden. Andere Effekte konnten anhand der Docking-Posen jedoch nicht erkl{\"a}rt werden. F{\"u}r die Entwicklung neuer Derivate ist deswegen eine umfassendere experimentelle Charakterisierung und darauf aufbauend eine Verfeinerung der Bindungsmodelle notwendig. Strukturell handelt es sich bei Hsp70 um ein Zwei-Dom{\"a}nen-System, dass verschiedene allostere Zust{\"a}nde einnehmen kann. Um die Auswirkungen der daraus folgenden Flexibilit{\"a}t auf die Stabilit{\"a}t der Struktur und die Bindung von Inhibitoren zu untersuchen, wurden molekulardynamische Simulationen f{\"u}r das Protein durchgef{\"u}hrt. Diese zeigen, dass das Protein tats{\"a}chlich eine {\"u}berdurchschnittlich hohe Flexibilit{\"a}t aufweist, die vor allem durch die relative Bewegung der beiden großen Dom{\"a}nen zueinander dominiert wird. Die Proteinkonformation die in der Kristallstruktur hscaz beobachtet wird, bleibt jedoch in ihrer Grundstruktur in allen vier durchgef{\"u}hrten Simulationen erhalten. Es konnten hingegen keine Hinweise daf{\"u}r gefunden werden, dass die Mutationen, welche die f{\"u}r die strukturbasierten Arbeiten verwendete Kristallstruktur im Vergleich zum Wildtyp aufweist, einen kritischen Einfluss auf die Gesamtstabilit{\"a}t des Systems haben. Obwohl die Interface-Region zwischen NBD und SBD also in allen Simulationen erhalten bleibt, wird die Konformation in diesem Bereich doch wesentlich durch die Dom{\"a}nenbewegung beeinflusst und variiert. Da dieser Proteinbereich den wahrscheinlichsten Angriffspunkt der Tetrahydroisochinolinone darstellt, wurde der Konformationsraum detailliert untersucht. Wie erwartet weist die Region eine nicht unerhebliche Flexibilit{\"a}t auf, welche zudem, im Sinne eines ``Induced-Fit''-Mechanismus, durch die Gegenwart eines Liganden (Apoptozol) stark beeinflusst wird. Es ist daher als sehr wahrscheinlich anzusehen, dass die Dynamik der Interface-Region auch einen wesentlichen Einfluss auf die Bindung der Tetrahydroisochinolinone hat. Molekuardynamische Berechnungen werden deswegen auch in zuk{\"u}nftige Arbeiten auf diesem Gebiet eine wichtige Rolle spielen. Die Analysen zeigen zudem, dass die Konformation der Interface-Region eng mit der Konformation des gesamten Proteins - vor allem im Bezug auf die relative Stellung von SBD und NBD zueinander - verkn{\"u}pft ist. Das untermauert die Hypothese, dass die Interface-Bindetasche einen Angriffspunkt f{\"u}r die Inhibtion des Proteins darstellt.}, subject = {Arzneimittelforschung}, language = {de} } @phdthesis{Zieschang2014, author = {Zieschang, Fabian}, title = {Energy and Electron Transfer Studies of Triarylamine-based Dendrimers and Cascades}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-101866}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {In this work the synthesis of dendritic macromolecules and small redox cascades was reported and studies of their energy and electron transfer properties discussed. The chromophores in the dendrimers and the redox cascades are linked via triazoles, which were built up by CuAAC. Thereby, a synthetic concept based on building blocks was implemented, which allowed the exchange of all basic components. Resulting structures include dendrimers composed exclusively of TAAs (G1-G3), dendrimers with an incorporated spirobifluorene core (spiro-G1 and spiro-G2) and the donor-acceptor dendrimer D-A-G1, in which the terminal groups are exchanged by NDIs. Furthermore, a series of model compounds was synthesised in order to achieve a better understanding of the photophysical processes in the dendrimers. A modification of the synthetic concept for dendrimers enabled the synthesis of a series of donor-acceptor triads (T-Me, T-Cl and T-CN) consisting of two TAA donors and one NDI acceptor unit. The intermediate TAA chromophore ensured a downhill redox gradient from the NDI to the terminal TAA, which was proved by cyclic voltammetry measurements. The redox potential of the intermediate TAA was adjusted by different redox determining substituents in the "free" p-position of the TAA. Additionally, two dyads (Da and Db) were synthesised which differ in the junction of the triazole to the TAA or the NDI, respectively. In these cascades a nodal-plane along the N-N-axes in the NDI and a large twist angle between the NDI and the N-aryl substituent guaranteed a small electronic coupling. The photophysical investigations of the dendrimers focused on the homo-energy transfer properties in the TAA dendrimers G1-G3. Steady-state emission spectroscopy revealed that the emission takes place from a charge transfer state. The polar excited state resulted in a strong Stokes shift of the emission, which in turn led to a small spectral overlap integral between the absorption of the acceptor and the emission of the donor in the solvent relaxed state. According to the F{\"o}rster theory, the overlap integral strongly determines the energy transfer rate. Fluorescence up-conversion measurements showed a strong and rapid initial fluorescence anisotropy decay and a much slower decrease on the longer time scale. The experiment revealed a fast energy transfer in the first 2 ps followed by a much slower energy hopping. Time resolved emission spectra (TRES) of the model compound M indicated a solvent relaxation on the same time scale as the fast energy transfer. The F{\"o}rster estimation of energy transfer rates in G1 explains fast energy transfer in the vibrotionally relaxed state before solvent relaxation starts. Thereby, the emission spectrum of G1 in cyclohexane served as the time zero spectrum. Thus, solvent relaxation and fast energy transfer compete in the first two ps after excitation and it is crucial to discriminate between energy transfer in the Franck-Condon and in the solvent relaxed state. Furthermore, this finding demonstrates that fast energy transfer occurs even in charge transfer systems where a large Stokes shift prevents an effective spectral overlap integral if there is a sufficient overlap integral in before solvent relaxation. Energy transfer upon excitation was also observed in the spiro dendrimers spiro-G1 and spiro-G2 and identified by steady-state emission anisotropy measurements. It was assumed that the energy in spiro-G1 is completely distributed over the entire molecule while the energy in spiro-G2 is probably distributed over only one individual branch. This finding was based on a more polarised emission of spiro-G2 compared to spiro-G1. This issue has to be ascertained by e.g. time resolved emission anisotropy measurements in further energy transfer studies. Concerning the electron transfer properties of TAA-triazole systems the radical cations of G1-G2, spiro-G1 and spiro-G2 and of the model compound M were investigated by steady-state absorption spectroscopy. Experiments showed that the triazole bridge exhibits small electronic communication between the adjacent chromophores but still possesses sufficient electronic coupling to allow an effective electron transfer from one chromophore to the other. Due to the high density of chromophores, their D-A-D structure and their superficial centrosymmetry, the presented dendrimers are prospective candidates for two-photon absorption applications. The dyads, triads and the donor-acceptor dendrimer D-A-G1 were investigated regarding their photoinduced electron transfer properties and the effects that dominate charge separation and charge recombination in these systems. The steady-state absorption spectra of all cascades elucidated a superposition of the absorption characteristics of the individual subunits and spectra indicated that the chromophores do not interact in the electronic ground state. Time resolved transient absorption spectroscopy of the cascades was performed in the fs- and ns-time regime in MeCN and toluene as solvent. Measurements revealed that upon with 28200 cm-1 (355) nm and 26300 cm-1 (380 nm), respectively, an electron is transferred from the TAA towards the NDI unit yielding a CS state. In the triads at first a CS1 state is populated, in which the NDI is reduced and the intermediate TAA1 is oxidised. Subsequently, an additional electron transfer from the terminal TAA2 to TAA1 led to the fully CS2 state. Fully CS states of the dyads and triads exhibit lifetimes in the ns-time regime. In contrast for Db in MeCN, a lifetime of 43 ps was observed for the CS state together with the population of a 3NDI state. The signals of the other CS states decay biexponentially, which is a result of the presence of the 1CS and the 3CS states. While magnetic field dependent measurements of Db did not show an effect due to the large singlet-triplet splitting, T-CN exhibited a strong magnetic field dependence which is an evidence for the 1CS/3CS assignment. Further analysis of the singlet-triplet dynamics are required and are currently in progress. Charge recombination occurred in the Marcus inverted region for compounds solved in toluene and in the Marcus normal region for MeCN as solvent. However, a significant inverted region effect was observed only for Db. Triads are probably characterised by charge recombination rates in the inverted and in the normal region near to the vertex of the Marcus parabola. Hence the inverted region effect is not pronounced and the rate charge recombination rates are all in the same magnitude. However, compared to the charge recombination rate of Db the enlarged spatial distance between the terminal TAA and the NDI in the fully CS2 states in the triads resulted in reduced charge recombination rates by ca. one order of magnitude. More important than a small charge recombination rate is an overall lifetime of the CS states and this lifetime can significantly be enhanced by the population of the 3CS state. The reported results reveal that a larger singlet-triplet splitting in the dyads led to a CS state lifetime in the us time regime while a lifetime in the ns-time regime was observed in cases of the triads. Moreover, the singlet-triplet splitting was found to be solvent dependent in the triads, which is a promising starting point for further investigations concerning singlet-triplet splitting. The donor-acceptor dendrimer D-A-G1 showed similar characteristics to the dyads. The generation of a CS state is assumed due to a clear NDI radical anion band in the transient absorption spectrum. Noteworthy, the typical transient absorption band of the TAA radical cation is absent for D A-G1 in toluene. Bixon-Jortner analysis yielded a similar electronic coupling in D-A-G1 compared to the dyads. However, the charge recombination rate is smaller than of Db due to a more energetic CS state, which in the inverted region slows down charge recombination. In combination a singlet-triplet splitting similar to the dyads prolongs the CS state lifetime up to 14 us in diluted solution. Both effects result in an even better performance of D-A-G1 concerning energy conversion. D A-G1 is therefore a promising key structure for further studies on light harvesting applications. In a prospective study a second generation donor-acceptor dendrimer D-A-G2 might be an attractive structure accessible by "click reaction" of 13 and 8. D-A-G2 is expected to exhibit a downhill oriented gradient of CS states as assumed from the CV studies on G1-G3.}, subject = {Sternpolymere}, language = {en} } @phdthesis{Zhang2014, author = {Zhang, Yi}, title = {Regulation of Agrobacterial Oncogene Expression in Host Plants}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-102578}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Virulent Agrobacterium tumefaciens strains transfer and integrate a DNA region of the tumor-inducing (Ti) plasmid, the T-DNA, into the plant genome and thereby cause crown gall disease. The most essential genes required for crown gall development are the T-DNA-encoded oncogenes, IaaH (indole-3-acetamide hydrolase), IaaM (tryptophan monooxygenase) for auxin, and Ipt (isopentenyl transferase) for cytokinin biosynthesis. When these oncogenes are expressed in the host cell, the levels of auxin and cytokinin increase and cause cell proliferation. The aim of this study was to unravel the molecular mechanisms, which regulate expression of the agrobacterial oncogenes in plant cells. Transcripts of the three oncogenes were expressed in Arabidopsis thaliana crown galls induced by A. tumefaciens strain C58 and the intergenic regions (IGRs) between their coding sequences (CDS) were proven to have promoter activity in plant cells. These promoters possess eukaryotic sequence structures and contain cis-regulatory elements for the binding of plant transcription factors. The high-throughput protoplast transactivation (PTA) system was used and identified the Arabidopsis thaliana transcription factors WRKY18, WRKY40, WRKY60 and ARF5 to activate the Ipt oncogene promoter. No transcription factor promoted the activity of the IaaH and IaaM promoters, despite the fact that the sequences contained binding elements for type B ARR transcription factors. Likewise, the treatment of Arabidopsis mesophyll protoplasts with cytokinin (trans-zeatin) and auxin (1-NAA) exerted no positive effect on IaaH and IaaM promoter activity. In contrast, the Ipt promoter strongly responded to a treatment with auxin and only modestly to cytokinin. The three Arabidopsis WRKYs play a role in crown gall development as the wrky mutants developed smaller crown galls than wild-type plants. The WRKY40 and WRKY60 genes responded very quickly to pathogen infection, two and four hours post infection, respectively. Transcription of the WRKY18 gene was induced upon buffer infiltration, which implicates a response to wounding. The three WRKY proteins interacted with ARF5 and with each other in the plant nucleus, but only WRKY40 together with ARF5 increased activation of the Ipt promoter. Moreover, ARF5 activated the Ipt promoter in an auxin-dependent manner. The severe developmental phenotype of the arf5 mutant prevented studies on crown gall development, nevertheless, the reduced crown gall growth on the transport inhibitor response 1 (TIR1) tir1 mutant, lacking the auxin sensor, suggested that auxin signaling is required for optimal crown gall development. In conclusion, A. tumefaciens recruits the pathogen defense related WRKY40 pathway to activate Ipt expression in T-DNA-transformed plant cells. IaaH and IaaM gene expression seems not to be controlled by transcriptional activators, but the increasing auxin levels are signaled via ARF5. The auxin-depended activation of ARF5 boosts expression of the Ipt gene in combination with WRKY40 to increase cytokinin levels and induce crown gall development.}, subject = {Agrobacterium tumefaciens}, language = {en} } @article{ZhangVanCrombruggenHoltappelsetal.2014, author = {Zhang, Nan and Van Crombruggen, Koen and Holtappels, Gabriele and Lan, Feng and Katotomichelakis, Michail and Zhang, Luo and H{\"o}gger, Petra and Bachert, Claus}, title = {Suppression of Cytokine Release by Fluticasone Furoate vs. Mometasone Furoate in Human Nasal Tissue Ex-Vivo}, series = {PLOS ONE}, volume = {9}, journal = {PLOS ONE}, number = {4}, doi = {10.1371/journal.pone.0093754}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-116779}, pages = {e93754}, year = {2014}, abstract = {Background: Topical glucocorticosteroids are the first line therapy for airway inflammation. Modern compounds with higher efficacy have been developed, but head-to-head comparison studies are sparse. Objective: To compare the activity of two intranasal glucocorticoids, fluticasone furoate (FF) and mometasone furoate (MF) with respect to the inhibition of T helper (Th)1, Th2 and Th17 cytokine release in airway mucosa. Methods: We used an ex-vivo human nasal mucosal tissue model and employed pre-and post-Staphylococcus aureus enterotoxin B (SEB)-challenge incubations with various time intervals and drug concentrations to mimic typical clinical situations of preventive or therapeutic use. Results: At a fixed concentration of 10(-10) M, FF had significantly higher suppressive effects on interferon (IFN)-gamma,interleukin (IL)-2 and IL-17 release, but not IL-5 or tumor necrosis factor (TNF)-alpha, vs. MF. While the maximal suppressive activity was maintained when FF was added before or after tissue stimulation, the cytokine suppression capacity of MF appeared to be compromised when SEB-induced cell activation preceded the addition of the drug. In a pre-challenge incubation setting with removal of excess drug concentrations, MF approached inhibition of IL-5 and TNF-alpha after 6 and 24 hours while FF maximally blocked the release of these cytokines right after pre-incubation. Furthermore, FF suppressed a wider range of T helper cytokines compared to MF. Conclusion: The study demonstrates the potential of our human mucosal model and shows marked differences in the ability to suppress the release of various cytokines in pre-and post-challenge settings between FF and MF mimicking typical clinical situations of preventive or therapeutic use.}, language = {en} } @article{ZhanStanciauskasStigloheretal.2014, author = {Zhan, Hong and Stanciauskas, Ramunas and Stigloher, Christian and Dizon, Kevin K. and Jospin, Maelle and Bessereau, Jean-Luis and Pinaud, Fabien}, title = {In vivo single-molecule imaging identifies altered dynamics of calcium channels in dystrophin-mutant C. elegans}, series = {Nature Communications}, volume = {5}, journal = {Nature Communications}, number = {4974}, doi = {10.1038/ncomms5974}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121125}, year = {2014}, abstract = {Single-molecule (SM) fluorescence microscopy allows the imaging of biomolecules in cultured cells with a precision of a few nanometres but has yet to be implemented in living adult animals. Here we used split-GFP (green fluorescent protein) fusions and complementation-activated light microscopy (CALM) for subresolution imaging of individual membrane proteins in live Caenorhabditis elegans (C. elegans). In vivo tissue-specific SM tracking of transmembrane CD4 and voltage-dependent Ca(2+) channels (VDCC) was achieved with a precision of 30 nm within neuromuscular synapses and at the surface of muscle cells in normal and dystrophin-mutant worms. Through diffusion analyses, we reveal that dystrophin is involved in modulating the confinement of VDCC within sarcolemmal membrane nanodomains in response to varying tonus of C. elegans body-wall muscles. CALM expands the applications of SM imaging techniques beyond the petri dish and opens the possibility to explore the molecular basis of homeostatic and pathological cellular processes with subresolution precision, directly in live animals.}, language = {en} } @article{Zernecke2014, author = {Zernecke, Alma}, title = {Distinct functions of specialized dendritic cell subsets in atherosclerosis and the road ahead}, series = {Scientifica}, volume = {2014}, journal = {Scientifica}, doi = {10.1155/2014/952625}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120241}, pages = {952625}, year = {2014}, abstract = {Atherosclerotic vascular disease is modulated by immune mechanisms. Dendritic cells (DCs) and T cells are present within atherosclerotic lesions and function as central players in the initiation and modulation of adaptive immune responses. In previous years, we have studied the functional contribution of distinct DC subsets in disease development, namely, that of CCL17-expressing DCs as well as that of plasmacytoid DCs that play specialized roles in disease development. This review focuses on important findings gathered in these studies and dissects the multifaceted contribution of CCL17-expressing DCs and pDCs to the pathogenesis of atherosclerosis. Furthermore, an outlook on future challenges faced when studying DCs in this detrimental disease are provided, and hurdles that will need to be overcome in order to enable a better understanding of the contribution of DCs to atherogenesis are discussed, a prerequisite for their therapeutic targeting in atherosclerosis.}, language = {en} } @phdthesis{Zeh2014, author = {Zeh, Katharina Isabel}, title = {Ver{\"a}nderungen der Herzratenvariabilit{\"a}t unter auditorischer Belastung ohne und mit St{\"o}rger{\"a}usch}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-116212}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Einleitung: Die Messung der Herzratenvariabilit{\"a}t (HRV), d.h. der st{\"a}ndigen Variation des Herzschlags, erm{\"o}glicht eine Beurteilung der autonomen Funktion des Herzens und die Erfassung physischer und psychischer Belastungszust{\"a}nde. In der Audiologie werden Patienten anhand ihrer Leistung in audiometrischen Testverfahren beurteilt, vermehrte H{\"o}ranstrengung kommt hier jedoch unzureichend zum Ausdruck. Die folgende Studie sollte kl{\"a}ren, ob auditorische Belastung in Form eines Sprachverst{\"a}ndnistests mit der HRV sensitiv erfasst werden kann und ob H{\"o}rsituationen mit St{\"o}rger{\"a}uschen eine h{\"o}here Stressantwort hervorrufen. Methoden: Die Datenerhebung erfolgte an 24 jungen h{\"o}rgesunden Probanden, wobei diese w{\"a}hrend der HRV-Aufzeichnung Wortlisten des Freiburger Sprachtests in Ruhe und unter Zuschaltung eines St{\"o}rger{\"a}usches (Rauschen) schriftlich wiedergeben sollten. Vor und nach der Testung erfolgten jeweils Ruhemessungen. Ergebnisse: Auditorische Belastungen konnten mithilfe der HRV zuverl{\"a}ssig erfasst und von Ruhebedingungen unterschieden werden. Die Testanforderungen riefen Parameterver{\"a}nderungen im Sinne einer Koaktivierung von Sympathikus und Parasympathikus hervor, wobei dieses Muster Ausdruck erh{\"o}hter Aufmerksamkeit zu sein scheint. Ein signifikanter HRV-Unterschied zwischen den beiden Schwierigkeitsgraden zeigte sich nicht. Geschlecht der Probanden und Reihenfolge der Testphasen spielten eine untergeordnete Rolle. Schlussfolgerungen: Die HRV-Aufzeichnung scheint geeignet, H{\"o}ranstrengung bei gesunden Personen objektiv zu messen. Weitere Studien an gr{\"o}ßeren Kontroll- und Patientenstichproben sollten kl{\"a}ren, ob diese zur Verbesserung der Diagnostik und Therapie von H{\"o}rbeeintr{\"a}chtigten beitragen kann.}, subject = {Herzfrequenzvariabilit{\"a}t}, language = {de} } @phdthesis{ZeeshangebMajeed2014, author = {Zeeshan [geb. Majeed], Saman}, title = {Implementation of Bioinformatics Methods for miRNA and Metabolic Modelling}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-102900}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Dynamic interactions and their changes are at the forefront of current research in bioinformatics and systems biology. This thesis focusses on two particular dynamic aspects of cellular adaptation: miRNA and metabolites. miRNAs have an established role in hematopoiesis and megakaryocytopoiesis, and platelet miRNAs have potential as tools for understanding basic mechanisms of platelet function. The thesis highlights the possible role of miRNAs in regulating protein translation in platelet lifespan with relevance to platelet apoptosis and identifying involved pathways and potential key regulatory molecules. Furthermore, corresponding miRNA/target mRNAs in murine platelets are identified. Moreover, key miRNAs involved in aortic aneurysm are predicted by similar techniques. The clinical relevance of miRNAs as biomarkers, targets, resulting later translational therapeutics, and tissue specific restrictors of genes expression in cardiovascular diseases is also discussed. In a second part of thesis we highlight the importance of scientific software solution development in metabolic modelling and how it can be helpful in bioinformatics tool development along with software feature analysis such as performed on metabolic flux analysis applications. We proposed the "Butterfly" approach to implement efficiently scientific software programming. Using this approach, software applications were developed for quantitative Metabolic Flux Analysis and efficient Mass Isotopomer Distribution Analysis (MIDA) in metabolic modelling as well as for data management. "LS-MIDA" allows easy and efficient MIDA analysis and, with a more powerful algorithm and database, the software "Isotopo" allows efficient analysis of metabolic flows, for instance in pathogenic bacteria (Salmonella, Listeria). All three approaches have been published (see Appendices).}, subject = {miRNS}, language = {en} } @phdthesis{Zdzieblo2014, author = {Zdzieblo, Daniela}, title = {Das Polycomb group Protein PCGF6 ist ein neuer und essentieller Faktor der iPS Reprogrammierung und kann in Kombination mit Oct4, Klf4 und c-Myc den Transkriptionsfaktor Sox2 ersetzen}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-106870}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Embryonale Stammzellen (ESCs) sind durch zwei charakteristische Eigenschaften definiert. Neben einer kontinuierlichen Selbsterneuerungskapazit{\"a}t weisen ESCs die F{\"a}higkeit auf, in alle Zelltypen der drei Keimbl{\"a}tter differenzieren zu k{\"o}nnen. Diese Eigenschaften werden unter anderem durch ein Netzwerk wichtiger Pluripotenzfaktoren als auch durch epigenetische Mechanismen reguliert, welche die Transkription von Pluripotenz- und Differenzierungsgenen kontrollieren. In murinen ESCs sind an der Repression von Differenzierungsgenen auch Polycomb group (PcG) Proteine beteiligt. Diese Proteine bauen zwei Chromatin-modifizierende Komplexe auf, die als Polycomb repressive complex 1 bzw. 2 (PRC1 bzw. PRC2) bezeichnet werden. Nach dem klassischen Modell der Polycombfunktion, katalysieren PRC1 und PRC2 gemeinsam zwei charakteristische Histonmodifikationen, die zur Repression PRC-spezifischer Zielgene beitragen. Zahlreiche Studien in den letzten Jahren belegen, dass der Proteinaufbau der PRC1 Komplexe stark variieren kann, wobei die Familie der Polycomb group RING finger (Pcgf) Proteine eine wichtige Rolle spielt. In diesem Zusammenhang definieren einzelne Pcgf Paraloge (Pcgf1 - 6) verschiedene PRC1 Varianten (PRC1.1 - 1.6), die Komplex-spezifische Bindestellen im Genom aufweisen. Diese Erkenntnisse lassen auf unterschiedliche Mechanismen der PRC1 Varianten und Pcgf Paralog-spezifische Funktionen schließen, die zum jetzigen Zeitpunkt nur wenig erforscht sind. F{\"u}r manche Pcgf Paraloge sind wichtige Rollen in verschiedenen Stammzelltypen und w{\"a}hrend der iPS Reprogrammierung bekannt. Pcgf1 (Nspc1), Pcgf2 (Mel18) und Pcgf4 (Bmi1) zeigen eine Funktion in verschiedenen adulten Stammzellen. Pcgf4 spielt dar{\"u}ber hinaus eine wichtige Rolle in der murinen iPS Reprogrammierung. F{\"u}r Pcgf6 (Mblr) wird eine Pluripotenz-assoziierte Funktion angenommen, denn Pcgf6 ist das einzige Pcgf Paralog, das eine erh{\"o}hte Expression in murinen ESCs aufweist, die jedoch im Verlauf der ESC-Differenzierung absinkt. Außerdem zeigen murine Pcgf6 KD ESCs eine verminderte Expression der Pluripotenzgene Oct4, Sox2 und Nanog, eine De-Repression mesodermaler und Testes-spezifischer Gene als auch eine erh{\"o}hte Tendenz zur h{\"a}matopoetischen Differenzierung. Wie genau Pcgf6 an der Regulation dieser Prozesse in murinen ESCs beteiligt ist, ist nicht bekannt. In der hier vorliegenden Dissertation wurde die Funktion von Pcgf6 in der murinen iPS Reprogrammierung untersucht. Da bereits f{\"u}r Pcgf4 eine Rolle in der Reprogrammierung somatischer Zellen gezeigt wurde und Pcgf6 eine erh{\"o}hte Expression in ESCs aufweist, wurde auch f{\"u}r Pcgf6 eine Funktion in der iPS Reprogrammierung angenommen. Zun{\"a}chst konnte in dieser Arbeit gezeigt werden, dass Pcgf6 w{\"a}hrend der iPS Reprogrammierung verst{\"a}rkt exprimiert wird und in iPS Zellen eine ESC-{\"a}hnliche Expression aufweist. Dar{\"u}ber hinaus konnte Pcgf6 in Kombination mit Oct4, Klf4 und c-Myc spezifisch den Transkriptionsfaktor Sox2 in der iPS Reprogrammierung ersetzen. Zudem wurden f{\"u}r OPKM-induzierte iPS Zellen charakteristische Eigenschaften pluripotenter Zellen nachgewiesen. Außerdem konnte eine Rolle von Pcgf6 als Enhancer-Faktor f{\"u}r die iPS Reprogrammierung ausgeschlossen werden, da die {\"U}berexpression von Pcgf6 zusammen mit den OSKM Faktoren keine additiven Effekte auf die Reprogrammierungseffizienz erzielte. Im Gegensatz dazu f{\"u}hrte der Knockdown (KD) von Pcgf6 in embryonalen Mausfibroblasten (MEFs) zu verminderten Effizienzen nach OSKM Reprogrammierung. Dar{\"u}ber hinaus handelte es sich bei der Mehrheit der AP+ Kolonien, die unter Pcgf6 KD Konditionen entstanden, um partiell-reprogrammierte iPS Zellen. Zusammengefasst zeigen die Ergebnisse der hier vorliegenden Arbeit, dass Pcgf6 ein neuer und essentieller Faktor der iPS Reprogrammierung ist, der in Kombination mit Oct4, Klf4 und c-Myc spezifisch den Transkriptionsfaktor Sox2 ersetzen kann.}, subject = {Stammzelle}, language = {de} } @phdthesis{Zarife2014, author = {Zarife, Rami}, title = {Integrative Warning Concept for Multiple Driver Assistance Systems}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-101118}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {More warning Advanced Driver Assistance Systems (ADAS) will be integrated into the European vehicles in the coming years, due to the ongoing progress on the way to automated driving and Euro NCAP requirements. Furthermore, upcoming technologies like Car-2-X will extend the sensory horizon of ADAS and enable the possibility to warn drivers earlier against various hazards than today. Regarding this progress, increasing numbers of different ADAS warnings will be communicated to the driver. In this context, an important question is how multiple ADAS warnings can be integrated into the Human Machine Interface (HMI) of vehicles and which warning elements are needed to ensure warning acceptance, efficiency and understandability seen from the driver's point of view. Two driving simulator studies were conducted and the effects of specific warning elements examined to develop a concept for the integration of upcoming warning ADAS, which focuses on early collision warnings. The implemented early warnings were defined with a warning onset of approximately two seconds before the last possible warning onset. Main questions were whether and how drivers profit from warning direction cues and/or warning object cues for their response to a hazard, and how these cues affect the acceptance of an integrated warning ADAS approach. Furthermore, it was analyzed whether a generalized warning can be used for a cluster of different ADAS concerning the group "warning of collisions". Therefore critical scenarios in rural and urban surroundings were evaluated, including frontal and lateral (intersections) scenarios. Unnecessary warnings and false alarms have also been taken into account. The results indicate that early warning direction cues have a high potential to assist drivers with an ADAS warning cluster which covers warning of collisions. In contrast, warning object cues seem to be less important for the drivers' performance and acceptance regarding early collision warnings. According to these findings, this thesis provides recommendations which warning elements should be included into future ADAS warnings in favor of an integrated warning approach.}, subject = {Fahrerassistenz}, language = {en} } @article{YoungClementsLangetal.2014, author = {Young, Joanna C. and Clements, Abigail and Lang, Alexander E. and Garnett, James A. and Munera, Diana and Arbeloa, Ana and Pearson, Jaclyn and Hartland, Elizabeth L. and Matthews, Stephen J. and Mousnier, Aurelie and Barry, David J. and Way, Michael and Schlosser, Andreas and Aktories, Klaus and Frankel, Gad}, title = {The Escherichia coli effector EspJ blocks Src kinase activity via amidation and ADP ribosylation}, series = {Nature Communications}, volume = {5}, journal = {Nature Communications}, number = {5887}, doi = {10.1038/ncomms6887}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121157}, year = {2014}, abstract = {The hallmark of enteropathogenic Escherichia coli (EPEC) infection is the formation of actin-rich pedestal-like structures, which are generated following phosphorylation of the bacterial effector Tir by cellular Src and Abl family tyrosine kinases. This leads to recruitment of the Nck-WIP-N-WASP complex that triggers Arp2/3-dependent actin polymerization in the host cell. The same phosphorylation-mediated signalling network is also assembled downstream of the Vaccinia virus protein A36 and the phagocytic Fc-gamma receptor FcγRIIa. Here we report that the EPEC type-III secretion system effector EspJ inhibits autophosphorylation of Src and phosphorylation of the Src substrates Tir and FcγRIIa. Consistent with this, EspJ inhibits actin polymerization downstream of EPEC, Vaccinia virus and opsonized red blood cells. We identify EspJ as a unique adenosine diphosphate (ADP) ribosyltransferase that directly inhibits Src kinase by simultaneous amidation and ADP ribosylation of the conserved kinase-domain residue, Src E310, resulting in glutamine-ADP ribose.}, language = {en} } @article{YilmazAksoyCamlitepeetal.2014, author = {Yilmaz, Ayse and Aksoy, Volkan and Camlitepe, Yilmaz and Giurfa, Martin}, title = {Eye structure, activity rhythms, and visually-driven behavior are tuned to visual niche in ants}, series = {Frontiers in Behavioral Neuroscience}, volume = {8}, journal = {Frontiers in Behavioral Neuroscience}, doi = {10.3389/fnbeh.2014.00205}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119595}, pages = {205}, year = {2014}, abstract = {Insects have evolved physiological adaptations and behavioral strategies that allow them to cope with a broad spectrum of environmental challenges and contribute to their evolutionary success. Visual performance plays a key role in this success. Correlates between life style and eye organization have been reported in various insect species. Yet, if and how visual ecology translates effectively into different visual discrimination and learning capabilities has been less explored. Here we report results from optical and behavioral analyses performed in two sympatric ant species, Formica cunicularia and Camponotus aethiops. We show that the former are diurnal while the latter are cathemeral. Accordingly, F. cunicularia workers present compound eyes with higher resolution, while C. aethiops workers exhibit eyes with lower resolution but higher sensitivity. The discrimination and learning of visual stimuli differs significantly between these species in controlled dual-choice experiments: discrimination learning of small-field visual stimuli is achieved by F. cunicularia but not by C. aethiops, while both species master the discrimination of large-field visual stimuli. Our work thus provides a paradigmatic example about how timing of foraging activities and visual environment match the organization of compound eyes and visually-driven behavior. This correspondence underlines the relevance of an ecological/evolutionary framework for analyses in behavioral neuroscience.}, language = {en} } @phdthesis{Xu2014, author = {Xu, Zhihao}, title = {Cooperative Formation Controller Design for Time-Delay and Optimality Problems}, isbn = {978-3-923959-96-9}, doi = {10.25972/OPUS-10555}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-105555}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {This dissertation presents controller design methodologies for a formation of cooperative mobile robots to perform trajectory tracking and convoy protection tasks. Two major problems related to multi-agent formation control are addressed, namely the time-delay and optimality problems. For the task of trajectory tracking, a leader-follower based system structure is adopted for the controller design, where the selection criteria for controller parameters are derived through analyses of characteristic polynomials. The resulting parameters ensure the stability of the system and overcome the steady-state error as well as the oscillation behavior under time-delay effect. In the convoy protection scenario, a decentralized coordination strategy for balanced deployment of mobile robots is first proposed. Based on this coordination scheme, optimal controller parameters are generated in both centralized and decentralized fashion to achieve dynamic convoy protection in a unified framework, where distributed optimization technique is applied in the decentralized strategy. This unified framework takes into account the motion of the target to be protected, and the desired system performance, for instance, minimal energy to spend, equal inter-vehicle distance to keep, etc. Both trajectory tracking and convoy protection tasks are demonstrated through simulations and real-world hardware experiments based on the robotic equipment at Department of Computer Science VII, University of W{\"u}rzburg.}, subject = {Optimalwertregelung}, language = {en} } @phdthesis{Xu2014, author = {Xu, Jiajia}, title = {A high-complexity lentiviral shRNA screen identifies synthetic lethal interactions with deregulated N-Myc in neuroblastoma cells}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-103157}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {In contrast to c-Myc, a deregulated expression of the MYCN gene is restricted to human neuroendocrine tumours. In most cases, the excessive activity of N-Myc results from a MYCN amplification. In neuroblastoma, amplification of MYCN is a predictor of poor prognosis and resistance to therapy. The inability to target the N-Myc protein directly necessitates the search for alternative targets. This project aimed at identifying genes specifically required for growth and survival of cells that express high levels of N-Myc using high-throughput shRNA screening combined with next generation sequencing. The identification and analysis of these genes will shed light on functional interaction partners of N-Myc. We screened a shRNA library containing 18,327 shRNAs and identified 148 shRNAs, which were selectively depleted in the presence of active N-Myc. In addition, shRNAs targeting genes that are involved in p53 and ARF turnover and apoptosis were depleted in the cell population during the screen. These processes are known to affect N-Myc-mediated apoptosis. Consequently, these results biologically validated the screen. The 148 shRNAs that showed a significant synthetic lethal interaction with high levels of N-Myc expression were further analysed using the bioinformatics program DAVID. We found an enrichment of shRNAs that target genes involved in specific biological processes. For example, we validated synthetic lethal interactions for genes such as, THOC1, NUP153 and LARP7, which play an important role in the process of RNA polymerase II-mediated transcription elongation. We also validated genes that are involved in the neddylation pathway. In the screen we identified Cullin 3, which is a component of the BTB-CUL3-Rbx1 ubiquitin ligase that is involved in the turnover of Cyclin E. Depletion of cullin 3 and activation of N-Myc was found to synergistically increase Cyclin E expression to supraphysiological levels, inducing S-phase arrest and a strong DNA damage response. Together with results from a proteomics analysis of N-Myc associated proteins, our results lead us to the following hypothesis: In a neuroblastoma cell, the high levels of N-Myc result in a conflict between RNA polymerase II and the replication machinery during S-phase. The newly identified interaction partners of N- Myc are required to solve this conflict. Consequently, loss of the interaction leads to a massive DNA damage and the induction of apoptosis. In addition, inhibition or depletion of the essential components of the neddylation pathway also results in an unresolvable problem during S-phase.}, subject = {Neuroblastom}, language = {en} } @phdthesis{Xian2014, author = {Xian, Yibo}, title = {Identification of essential genes and novel virulence factors of Neisseria gonorrhoeae by transposon mutagenesis}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-102659}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Neisseria gonorrhoeae is a human-specific pathogen that causes gonorrhea. It is defined as a super bacterium by the WHO due to the emergence of gonococci that are resistant to a variety of antibiotics and a rapidly increasing infection incidence. Genome-wide investigation of neisserial gene essentiality and novel virulence factors is urgently required in order to identify new targets for anti-neisserial therapeutics. To identify essential genes and new virulence factors, a high-density mutant library in N. gonorrhoeae MS11 was generated by in vitro transposon mutagenesis. The transposon library harbors more than 100,000 individual mutants, a density that is unprecedented in gonococcal research. Essential genes in N. gonorrhoeae were determined by enumerating frequencies of transposon insertion sites (TIS) with Illumina deep sequencing (Tn-seq). Tn-seq indicated an average distance between adjacent TIS of 25 bp. Statistical analysis unequivocally demonstrated 781 genes that were significantly depleted in TIS and thus are essential for Neisseria survival. A subset of the genes was experimentally verified to comprise essential genes and thus support the outcome of the study. The hereby identified candidate essential genes thus may constitute excellent targets for the development of new antibiotics or vaccines. In a second study, the transposon mutant library was applied in a genome-scale "negative-selection strategy" to identify genes that are involved in low phosphate-dependent invasion (LPDI). LPDI is dependent on the Neisseria porin subtype PorBIA which acts as an epithelial cell invasin in absence of phosphate and is associated with severe pathogenicity in disseminated gonococcal infections (DGI). Tn-seq demonstrated 98 genes, which were involved in adherence to host cells and 43 genes involved in host cell invasion. E.g. the hypothetical protein NGFG_00506, an ABC transporter ATP-binding protein NGFG_01643, as well as NGFG_04218 encoding a homolog of mafI in N. gonorrhoeae FA1090 were experimentally verified as new invasive factors in LPDI. NGFG_01605, a predicted protease, was identified to be a common factor involved in PorBIA, Opa50 and Opa57-mediated neisserial engulfment by the epithelial cells. Thus, this first systematic Tn-seq application in N. gonorrhoeae identified a set of previously unknown N. gonorrhoeae invasive factors which demonstrate molecular mechanisms of DGI.}, subject = {Neisseria gonorrhoeae}, language = {en} } @article{WoelkSuetterlinKochetal.2014, author = {W{\"o}lk, Julian and S{\"u}tterlin, Stefan and Koch, Stefan and V{\"o}gele, Claus and Schulz, Stefan M.}, title = {Enhanced cardiac perception predicts impaired performance in the Iowa Gambling Task in patients with panic disorder}, series = {Brain and Behavior}, volume = {4}, journal = {Brain and Behavior}, number = {2}, issn = {2162-3279}, doi = {10.1002/brb3.206}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119865}, pages = {238-46}, year = {2014}, abstract = {OBJECTIVE: Somatic marker theory predicts that somatic cues serve intuitive decision making; however, cardiovascular symptoms are threat cues for patients with panic disorder (PD). Therefore, enhanced cardiac perception may aid intuitive decision making only in healthy individuals, but impair intuitive decision making in PD patients. METHODS: PD patients and age-and sex-matched volunteers without a psychiatric diagnosis (n=17, respectively) completed the Iowa Gambling Task (IGT) as a measure of intuitive decision making. Interindividual differences in cardiac perception were assessed with a common mental-tracking task. RESULTS: In line with our hypothesis, we found a pattern of opposing associations (Fisher's Z=1.78, P=0.04) of high cardiac perception with improved IGT-performance in matched control-participants (r=0.36, n=14) but impaired IGT-performance in PD patients (r=-0.38, n=13). CONCLUSION: Interoceptive skills, typically assumed to aid intuitive decision making, can have the opposite effect in PD patients who experience interoceptive cues as threatening, and tend to avoid them. This may explain why PD patients frequently have problems with decision making in everyday life. Screening of cardiac perception may help identifying patients who benefit from specifically tailored interventions.}, language = {en} } @article{WaeschkeHardgeHancocketal.2014, author = {W{\"a}schke, Nicole and Hardge, Kerstin and Hancock, Christine and Hilker, Monika and Obermaier, Elisabeth and Meiners, Torsten}, title = {Odour Environments: How Does Plant Diversity Affect Herbivore and Parasitoid Orientation?}, series = {PlOS ONE}, volume = {9}, journal = {PlOS ONE}, number = {1}, issn = {1932-6203}, doi = {10.1371/journal.pone.0085152}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117687}, pages = {e85152}, year = {2014}, abstract = {Plant diversity is known to affect success of host location by pest insects, but its effect on olfactory orientation of non-pest insect species has hardly been addressed. First, we tested in laboratory experiments the hypothesis that non-host plants, which increase odour complexity in habitats, affect the host location ability of herbivores and parasitoids. Furthermore, we recorded field data of plant diversity in addition to herbivore and parasitoid abundance at 77 grassland sites in three different regions in Germany in order to elucidate whether our laboratory results reflect the field situation. As a model system we used the herb Plantago lanceolata, the herbivorous weevil Mecinus pascuorum, and its larval parasitoid Mesopolobus incultus. The laboratory bioassays revealed that both the herbivorous weevil and its larval parasitoid can locate their host plant and host via olfactory cues even in the presence of non-host odour. In a newly established two-circle olfactometer, the weevils capability to detect host plant odour was not affected by odours from non-host plants. However, addition of non-host plant odours to host plant odour enhanced the weevils foraging activity. The parasitoid was attracted by a combination of host plant and host volatiles in both the absence and presence of non-host plant volatiles in a Y-tube olfactometer. In dual choice tests the parasitoid preferred the blend of host plant and host volatiles over its combination with non-host plant volatiles. In the field, no indication was found that high plant diversity disturbs host (plant) location by the weevil and its parasitoid. In contrast, plant diversity was positively correlated with weevil abundance, whereas parasitoid abundance was independent of plant diversity. Therefore, we conclude that weevils and parasitoids showed the sensory capacity to successfully cope with complex vegetation odours when searching for hosts.}, language = {en} } @phdthesis{Wurster2014, author = {Wurster, Sebastian}, title = {Die Bedeutung von LIN9 f{\"u}r die Regulation der Genexpression, die genomische Stabilit{\"a}t und die Tumorsuppression}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114967}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Pocket proteins and E2F transcription factors regulate the expression of cell cycle associated genes and play a central role in the coordination of cell division, differentiation, and apoptosis. Disorders of these pathways contribute to the development of various human tumor entities. Despite intensive research in the field of cell cycle regulation many details are not yet understood. The LIN complex (LINC / DREAM) is a recently discovered human multiprotein complex, which dynamically interacts with pocket proteins and E2F transcription factors. An essential component of the LIN complex is the LIN9 protein. In order to obtain a better insight into the function of this protein in cell cycle regulation and tumorigenesis, a conditional Lin9 knockout mouse model was established in our laboratory. The primary objective of this study was the phenotypic characterization of embryonic fibroblasts (MEFs) from these mice. Shortly after inactivation of Lin9 cell proliferation was massively impaired. Multiple types of mitotic defects such as structural abnormalities of the spindle apparatus, aberrant nuclei, failed nuclear segregation and cytokinesis failure have been observed in Lin9-depleted cells leading to a dramatic increase in polyploid and aneuploid cells. Ultimately these serious aberrations result in premature cellular senescence. If the senescence of Lin9-deficient cells is overcome by the Large T antigen the cells can adhere to the loss of Lin9, but show severe genomic instability and grow anchorage-independently in soft-agar as a sign of oncogenic transformation. In the second part of the thesis the gene expression of Lin9-deficient cells was assessed by quantitative real time PCR analyses to determine, whether the mitotic abnormalities are caused by transcriptional defects. Here a significant reduction of mitotic gene expression was observed in Lin9-depleted cells. Additionally chromatin immunoprecipitation experiments were performed to clarify the underlying molecular mechanisms. Compared to control cells epigenetic alterations at the promoters of mitotic target genes with regard to activating histone modifications were found in Lin9-deficient MEFs. In the last section of this study, the effects of Lin9 heterozygosity were analyzed. Lin9 heterozygous MEFs showed normal proliferation, although expression of different mitotic genes was slightly reduced. It appeared, however, that the mitotic spindle checkpoint of Lin9 heterozygous MEFs is weakened and thus over several cell generations an increase in polyploid cells was observed. Soft-agar assays showed that Lin9 heterozygosity contributes to oncogenic transformation. Taken together, these results document a crucial role of LIN9 in the regulation of cell cycle-associated gene expression. LIN9 is an essential factor for cell proliferation on one hand, while at the same time it functions as a tumor suppressor.}, subject = {Zellzyklus}, language = {de} } @article{WurmbSchlerethKredeletal.2014, author = {Wurmb, Thomas Erik and Schlereth, Stefan and Kredel, Markus and Muellenbach, Ralf M. and Wunder, Christian and Brederlau, J{\"o}rg and Roewer, Norbert and Kenn, Werner and Kunze, Ekkehard}, title = {Routine Follow-Up Cranial Computed Tomography for Deeply Sedated, Intubated, and Ventilated Multiple Trauma Patients with Suspected Severe Head Injury}, series = {BioMed Research International}, journal = {BioMed Research International}, number = {361949}, doi = {10.1155/2014/361949}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120084}, year = {2014}, abstract = {Background. Missed or delayed detection of progressive neuronal damage after traumatic brain injury (TBI) may have negative impact on the outcome. We investigated whether routine follow-up CT is beneficial in sedated and mechanically ventilated trauma patients. Methods. The study design is a retrospective chart review. A routine follow-up cCT was performed 6 hours after the admission scan. We defined 2 groups of patients, group I: patients with equal or recurrent pathologies and group II: patients with new findings or progression of known pathologies. Results. A progression of intracranial injury was found in 63 patients (42\%) and 18 patients (12\%) had new findings in cCT 2 (group II). In group II a change in therapy was found in 44 out of 81 patients (54\%). 55 patients with progression or new findings on the second cCT had no clinical signs of neurological deterioration. Of those 24 patients (44\%) had therapeutic consequences due to the results of the follow-up cCT. Conclusion. We found new diagnosis or progression of intracranial pathology in 54\% of the patients. In 54\% of patients with new findings and progression of pathology, therapy was changed due to the results of follow-up cCT. In trauma patients who are sedated and ventilated for different reasons a routine follow-up CT is beneficial.}, language = {en} } @article{WongWinterHartigetal.2014, author = {Wong, David and Winter, Oliver and Hartig, Christina and Siebels, Svenja and Szyska, Martin and Tiburzy, Benjamin and Meng, Lingzhang and Kulkarni, Upasana and F{\"a}hnrich, Anke and Bommert, Kurt and Bargou, Ralf and Berek, Claudia and Van, Trung Chu and Bogen, Bjarne and Jundt, Franziska and Manz, Rudolf Armin}, title = {Eosinophils and Megakaryocytes Support the Early Growth of Murine MOPC315 Myeloma Cells in Their Bone Marrow Niches}, series = {PLOS ONE}, volume = {9}, journal = {PLOS ONE}, number = {10}, doi = {10.1371/journal.pone.0109018}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-115269}, pages = {e109018}, year = {2014}, abstract = {Multiple myeloma is a bone marrow plasma cell tumor which is supported by the external growth factors APRIL and IL-6, among others. Recently, we identified eosinophils and megakaryocytes to be functional components of the micro-environmental niches of benign bone marrow plasma cells and to be important local sources of these cytokines. Here, we investigated whether eosinophils and megakaryocytes also support the growth of tumor plasma cells in the MOPC315. BM model for multiple myeloma. As it was shown for benign plasma cells and multiple myeloma cells, IL-6 and APRIL also supported MOPC315. BM cell growth in vitro, IL-5 had no effect. Depletion of eosinophils in vivo by IL-5 blockade led to a reduction of the early myeloma load. Consistent with this, myeloma growth in early stages was retarded in eosinophil-deficient Delta dblGATA-1 mice. Late myeloma stages were unaffected, possibly due to megakaryocytes compensating for the loss of eosinophils, since megakaryocytes were found to be in contact with myeloma cells in vivo and supported myeloma growth in vitro. We conclude that eosinophils and megakaryocytes in the niches for benign bone marrow plasma cells support the growth of malignant plasma cells. Further investigations are required to test whether perturbation of these niches represents a potential strategy for the treatment of multiple myeloma.}, language = {en} } @article{WondergemHerrmannSyrbuetal.2014, author = {Wondergem, Marielle J. and Herrmann, Ken and Syrbu, Sergei and Zijlstra, Jos{\´e}e M. and Hoetjes, Nikie and Hoekstra, Otto S. and Cillessen, Saskia A. G. M. and Moesbergen, Laura M. and Buck, Andreas K. and Vose, Julie M. and Juweid, Malik E.}, title = {18 F-fluorothymidine uptake in follicular lymphoma and error-prone DNA repair}, series = {EJNMMI Research}, volume = {4}, journal = {EJNMMI Research}, doi = {10.1186/2191-219x-4-3}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121233}, pages = {3}, year = {2014}, abstract = {BACKGROUND: We observed a disproportional 18 F-fluorothymidine (F-FLT) uptake in follicular lymphoma (FL) relative to its low cell proliferation. We tested the hypothesis that the 'excess' uptake of 18 F-FLT in FL is related to error-prone DNA repair and investigated whether this also contributes to 18 F-FLT uptake in diffuse large B cell lymphoma (DLBCL). METHODS: We performed immunohistochemical stainings to assess the pure DNA replication marker MIB-1 as well as markers of both DNA replication and repair like PCNA, TK-1 and RPA1 on lymph node biopsies of 27 FLs and 35 DLBCLs. In 7 FL and 15 DLBCL patients, 18 F-FLT-PET had been performed. RESULTS: 18 F-FLT uptake was lower in FL than in DLBCL (median SUVmax 5.7 vs. 8.9, p = 0,004), but the ratio of 18 F-FLT-SUVmax to percentage of MIB-1 positive cells was significantly higher in FL compared with DLBCL (p = 0.001). The median percentage of MIB-1 positive cells was 10\% (range, 10\% to 20\%) in FL and 70\% (40\% to 80\%) in DLBCL. In contrast, the median percentages of PCNA, TK-1 and RPA1 positive cells were 90\% (range, 80 to 100), 90\% (80 to 100) and 100\% (80 to 100) in FL versus 90\% (60 to 100), 90\% (60 to 100) and 100\% (80 to 100) in DLBCL, respectively. CONCLUSIONS: This is the first demonstration of a striking discordance between 18 F-FLT uptake in FL and tumour cell proliferation. High expression of DNA replication and repair markers compared with the pure proliferation marker MIB-1 in FL suggests that this discordance might be due to error-prone DNA repair. While DNA repair-related 18 F-FLT uptake considerably contributes to 18 F-FLT uptake in FL, its contribution to 18 F-FLT uptake in highly proliferative DLBCL is small. This apparently high contribution of DNA repair to the 18 F-FLT signal in FL may hamper studies where 18 F-FLT is used to assess response to cytostatic therapy or to distinguish between FL and transformed lymphoma.}, language = {en} } @phdthesis{Wolter2014, author = {Wolter, Steve}, title = {Single-molecule localization algorithms in super-resolution microscopy}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-109370}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Lokalisationsmikroskopie ist eine Methodenklasse der superaufl{\"o}senden Fluoreszenzmikroskopie, deren Methoden sich durch stochastische zeitliche Isolation der Fluoreszenzemission auszeichnen. Das Blinkverhalten von Fluorophoren wird so ver{\"a}ndert, dass gleichzeitige Aktivierung von einander nahen Fluorophoren unwahrscheinlich ist. Bekannte okalisationsmikroskopische Methoden umfassen dSTORM, STORM, PALM, FPALM, oder GSDIM. Lokalisationsmikroskopie ist von hohem biologischem Interesse, weil sie die Aufl{\"o}sung des Fluoreszenzmikroskops bei minimalem technischem Aufwand um eine Gr{\"o}ßenordnung verbessert. Der verbundene Rechenaufwand ist allerdings erheblich, da Millionen von Fluoreszenzemissionen einzeln mit Nanometergenauigkeit lokalisiert werden m{\"u}ssen. Der Rechen- und Implementationsaufwand dieser Auswertung hat die Verbreitung der superaufl{\"o}senden Mikroskopie lange verz{\"o}gert. Diese Arbeit beschreibt meine algorithmische Grundstruktur f{\"u}r die Auswertung lokalisationsmikroskopischer Daten. Die Echtzeitf{\"a}higkeit, d.h. eine Auswertegeschwindigkeit oberhalb der Datenaufnahmegeschwindigkeit an normalen Messaufbauten, meines neuartigen und quelloffenen Programms wird demonstriert. Die Geschwindigkeit wird auf verbrauchermarktg{\"a}ngigen Prozessoren erreicht und dadurch spezialisierte Rechenzentren oder der Einsatz von Grafikkarten vermieden. Die Berechnung wird mit dem allgemein anerkannten Gaussschen Punktantwortmodell und einem Rauschmodell auf Basis der gr{\"o}ßten Poissonschen Wahrscheinlichkeit durchgef{\"u}hrt. Die algorithmische Grundstruktur wird erweitert, um robuste und optimale Zweifarbenauswertung zu realisieren und damit korrelative Mikroskopie zwischen verschiedenen Proteinen und Strukturen zu erm{\"o}glichen. Durch den Einsatz von kubischen Basissplines wird die Auswertung von dreidimensionalen Proben vereinfacht und stabilisiert, um pr{\"a}zisem Abbilden von mikrometerdicken Proben n{\"a}her zu kommen. Das Grenzverhalten von Lokalisationsalgorithmen bei hohen Emissionsdichten wird untersucht. Abschließend werden Algorithmen f{\"u}r die Anwendung der Lokalisationsmikroskopie auf verbreitete Probleme der Biologie aufgezeigt. Zellul{\"a}re Bewegung und Motilit{\"a}t werden anhand der in vitro Bewegung von Myosin-Aktin-Filamenten studiert. Lebendzellbildgebung mit hellen und stabilen organischen Fluorophoren wird mittels SNAP-tag-Fusionsproteinen realisiert. Die Analyse des Aufbaus von Proteinklumpen zeigt, wie Lokalisationsmikroskopie neue quantitative Ans{\"a}tze jenseits reiner Bildgebung bietet.}, subject = {Fluoreszenzmikroskopie}, language = {en} } @article{WohlfartWegmannLeimgruber2014, author = {Wohlfart, Christian and Wegmann, Martin and Leimgruber, Peter}, title = {Mapping threatened dry deciduous dipterocarp forest in South-east Asia for conservation management}, series = {Tropical Conservation Science}, volume = {7}, journal = {Tropical Conservation Science}, number = {4}, issn = {1940-0829}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117782}, pages = {597-613}, year = {2014}, abstract = {Habitat loss is the primary reason for species extinction, making habitat conservation a critical strategy for maintaining global biodiversity. Major habitat types, such as lowland tropical evergreen forests or mangrove forests, are already well represented in many conservation priorities, while others are underrepresented. This is particularly true for dry deciduous dipterocarp forests (DDF), a key forest type in Asia that extends from the tropical to the subtropical regions in South-east Asia (SE Asia), where high temperatures and pronounced seasonal precipitation patterns are predominant. DDF are a unique forest ecosystem type harboring a wide range of important and endemic species and need to be adequately represented in global biodiversity conservation strategies. One of the greatest challenges in DDF conservation is the lack of detailed and accurate maps of their distribution due to inaccurate open-canopy seasonal forest mapping methods. Conventional land cover maps therefore tend to perform inadequately with DDF. Our study accurately delineates DDF on a continental scale based on remote sensing approaches by integrating the strong, characteristic seasonality of DDF. We also determine the current conservation status of DDF throughout SE Asia. We chose SE Asia for our research because its remaining DDF are extensive in some areas but are currently degrading and under increasing pressure from significant socio-economic changes throughout the region. Phenological indices, derived from MODIS vegetation index time series, served as input variables for a Random Forest classifier and were used to predict the spatial distribution of DDF. The resulting continuous fields maps of DDF had accuracies ranging from R-2 = 0.56 to 0.78. We identified three hotspots in SE Asia with a total area of 156,000 km(2), and found Myanmar to have more remaining DDF than the countries in SE Asia. Our approach proved to be a reliable method for mapping DDF and other seasonally influenced ecosystems on continental and regional scales, and is very valuable for conservation management in this region.}, language = {en} } @phdthesis{Wittmann2014, author = {Wittmann, Tanja}, title = {Die Bedeutung von Phospholamban Pentameren f{\"u}r die Phospholamban-Phosphorylierung und die Regulation der SERCA2a-Aktivit{\"a}t}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-108286}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Phospholamban (PLN) reguliert in der Herzmuskelzelle die Aktivit{\"a}t der Kalzium-ATPase SERCA2a und damit maßgeblich die Kinetik des myozyt{\"a}ren Kalzium-Kreislaufs. PLN liegt im Herz in Form von Monomeren und Pentameren vor, wobei angenommen wird, dass nur die Monomere die Aktivit{\"a}t der SERCA2a durch direkte Interaktion hemmen. Die Funktion der Pentamere ist noch immer unklar. In der vorliegenden Arbeit sollte untersucht werden, ob PLN-Pentamere f{\"u}r die PKA-abh{\"a}ngige Phosphorylierung des PLN und damit f{\"u}r die Regulation der PLN-Aktivit{\"a}t von Bedeutung sein k{\"o}nnen. Mit Hilfe transfizierter HEK293AD-Zellen und verschiedener PLN-Mutanten wurde gezeigt, dass sowohl PLN-Monomere als auch -Pentamere durch die PKA phosphoryliert werden, wobei die Phosphorylierung der Monomere in Anwesenheit von Pentameren geringer ist und verz{\"o}gert abl{\"a}uft. Ohne Pentamer war die Phosphorylierung der Monomere dagegen bereits basal und nach moderater PKA-Stimulation st{\"a}rker. Ursache daf{\"u}r schien eine h{\"o}here Affinit{\"a}t der PKA f{\"u}r PLN-Pentamere als f{\"u}r Monomere zu sein. Dar{\"u}ber hinaus konnte gezeigt werden, dass nicht nur PLN-Monomere sondern auch das PLN-Pentamer mit der SERCA2a interagieren und das Oligomer im Gegensatz zum PLN-Monomer nach PLN-Phosphorylierung zu einem kleinen Anteil an die SERCA2a gebunden bleibt. Auch spiegelten sich die unterschiedlichen Phosphorylierungsmuster von PLN-Pentamer und Monomer in den SERCA2a-Aktivit{\"a}ten wieder. Messungen der SERCA2a-Aktivit{\"a}t in M{\"a}useherzen mit (Wildtyp und TgPLN) und ohne (TgAFA-PLN) PLN-Pentamere zeigten, dass Wildtyp-PLN und TgPLN die SERCA2a st{\"a}rker inhibieren als TgAFA-PLN, was auf die st{\"a}rkere basale Phosphorylierung des TgAFA-PLN zur{\"u}ckzuf{\"u}hren war. Nach PKA-Stimulation war der Anstieg der Enzymaktivit{\"a}t in Anwesenheit von TgPLN fast dreimal h{\"o}her als in TgAFA-PLN. Analog zeigte TgPLN eine deutlichere Steigerung der Phosphorylierung der PLN-Monomere als TgAFA-PLN. Zusammenfassend konnte gezeigt werden, dass PLN-Pentamere durch Hemmung der Monomer-Phosphorylierung deren Aktivit{\"a}t erh{\"o}hen mit der Folge einer verst{\"a}rkten Inhibition der SERCA2a. Da die inhibitorische Wirkung durch PKA-Stimulation vollst{\"a}ndig aufgehoben werden kann, erh{\"o}hen die Pentamere die Regulationsm{\"o}glichkeiten der SERCA2a-Aktivit{\"a}t.}, subject = {Phospholamban}, language = {de} } @phdthesis{Wittmann2014, author = {Wittmann, Katharina}, title = {Adipose Tissue Engineering - Development of Volume-Stable 3-Dimensional Constructs and Approaches Towards Effective Vascularization}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-107196}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Adipose tissue defects and related pathologies still represent major challenges in reconstructive surgery. Based on to the paradigm 'replace with alike', adipose tissue is considered the ideal substitute material for damaged soft tissue [1-3]. Yet the transfer of autologous fat, particularly larger volumes, is confined by deficient and unpredictable long term results, as well as considerable operative morbidity at the donor and recipient site [4-6], calling for innovative treatment options to improve patient care. With the aim to achieve complete regeneration of soft tissue defects, adipose tissue engineering holds great promise to provide functional, biologically active adipose tissue equivalents. Here, especially long-term maintenance of volume and shape, as well as sufficient vascularization of engineered adipose tissue represent critical and unresolved challenges [7-9]. For adipose tissue engineering approaches to be successful, it is thus essential to generate constructs that retain their initial volume in vivo, as well as to ensure their rapid vascularization to support cell survival and differentiation for full tissue regeneration [9,10]. Therefore, it was the ultimate goal of this thesis to develop volume-stable 3D adipose tissue constructs and to identify applicable strategies for sufficient vascularization of engineered constructs. The feasibility of the investigated approaches was verified by translation from in vitro to in vivo as a critical step for the advancement of potential regenerative therapies. For the development of volume-stable constructs, the combination of two biomaterials with complementary properties was successfully implemented. In contrast to previous approaches in the field using mainly non-degradable solid structures for mechanical protection of developing adipose tissue [11-13], the combination of a cell-instructive hydrogel component with a biodegradable porous support structure of adequate texture was shown advantageous for the generation of volume-stable adipose tissue. Specifically, stable fibrin hydrogels previously developed in our group [14] served as cell carrier and supported the adipogenic development of adipose-derived stem cells (ASCs) as reflected by lipid accumulation and leptin secretion. Stable fibrin gels were thereby shown to be equally supportive of adipogenesis compared to commercial TissuCol hydrogels in vitro. Using ASCs as a safe source of autologous cells [15,16] added substantial practicability to the approach. To enhance the mechanical strength of the engineered constructs, porous biodegradable poly(ε caprolactone)-based polyurethane (PU) scaffolds were introduced as support structures and shown to exhibit adequately sized pores to host adipocytes as well as interconnectivity to allow coherent tissue formation and vascularization. Low wettability and impaired cell attachment indicated that PU scaffolds alone were insufficient in retaining cells within the pores, yet cytocompatibility and differentiation of ASCs were adequately demonstrated, rendering the PU scaffolds suitable as support structures for the generation of stable fibrin/PU composite constructs (Chapter 3). Volume-stable adipose tissue constructs were generated by seeding the pre-established stable fibrin/PU composites with ASCs. Investigation of size and weight in vitro revealed that composite constructs featured enhanced stability relative to stable fibrin gels alone. Comparing stable fibrin gels and TissuCol as hydrogel components, it was found that TissuCol gels were less resilient to degradation and contraction. Composite constructs were fully characterized, showing good cell viability of ASCs and strong adipogenic development as indicated by functional analysis via histological Oil Red O staining of lipid vacuoles, qRT-PCR analysis of prominent adipogenic markers (PPARγ, C/EBPα, GLUT4, aP2) and quantification of leptin secretion. In a pilot study in vivo, investigating the suitability of the constructs for transplantation, stable fibrin/PU composites provided with a vascular pedicle gave rise to areas of well-vascularized adipose tissue, contrasted by insufficient capillary formation and adipogenesis in constructs implanted without pedicle. The biomaterial combination of stable fibrin gels and porous biodegradable PU scaffolds was thereby shown highly suitable for the generation of volume-stable adipose tissue constructs in vivo, and in addition, the effectiveness of immediate vascularization upon implantation to support adipose tissue formation was demonstrated (Chapter 4). Further pursuing the objective to investigate adequate vascularization strategies for engineered adipose tissue, hypoxic preconditioning was conducted as a possible approach for in vitro prevascularization. In 2D culture experiments, analysis on the cellular level illustrated that the adipogenic potential of ASCs was reduced under hypoxic conditions when applied in the differentiation phase, irrespective of the oxygen tension encountered by the cells during expansion. Hypoxic treatment of ASCs in 3D constructs prepared from stable fibrin gels similarly resulted in reduced adipogenesis, whereas endothelial CD31 expression as well as enhanced leptin and vascular endothelial growth factor (VEGF) secretion indicated that hypoxic treatment indeed resulted in a pro-angiogenic response of ASCs. Especially the observed profound regulation of leptin production by hypoxia and the dual role of leptin as adipokine and angiogenic modulator were considered an interesting connection advocating further study. Having confirmed the hypothesis that hypoxia may generate a pro-angiogenic milieu inside ASC-seeded constructs, faster vessel ingrowth and improved vascularization as well as an enhanced tolerance of hypoxia-treated ASCs towards ischemic conditions upon implanatation may be expected, but remain to be verified in rodent models in vivo (Chapter 5). Having previously been utilized for bone and cartilage engineering [17-19], as well as for revascularization and wound healing applications [20-22], stromal-vascular fraction (SVF) cells were investigated as a novel cell source for adipose tissue engineering. Providing cells with adipogenic differentiation as well as vascularization potential, the SVF was applied with the specific aim to promote adipogenesis and vascularization in engineered constructs in vivo. With only basic in vitro investigations by Lin et al. addressing the SVF for adipose repair to date [23], the present work thoroughly investigated SVF cells for adipose tissue construct generation in vitro, and in particular, pioneered the application of these cells for adipose tissue engineering in vivo. Initial in vitro experiments compared SVF- and ASC-seeded stable fibrin constructs in different medium compositions employing preadipocyte (PGM-2) and endothelial cell culture medium (EGM-2). It was found that a 1:1 mixture of PGM-2 and EGM-2, as previously established for co-culture models of adipogenesis [24], efficiently maintained cells with adipogenic and endothelial potential in SVF-seeded constructs in short and long-term culture setups. Observations on the cellular level were supported by analysis of mRNA expression of characteristic adipogenic and endothelial markers. In preparation of the evaluation of SVF-seeded constructs under in vivo conditions, a whole mount staining (WMS) method, facilitating the 3D visualization of adipocytes and blood vessels, was successfully established and optimized using native adipose tissue as template (Chapter 6). In a subcutaneous nude mouse model, SVF cells were, for the first time in vivo, elucidated for their potential to support the functional assembly of vascularized adipose tissue. Investigating the effect of adipogenic precultivation of SVF-seeded stable fibrin constructs in vitro prior to implantation on the in vivo outcome, hormonal induction was shown beneficial in terms of adipocyte development, whereas a strong vascularization potential was observed when no adipogenic inducers were added. Via histological analysis, it was proven that the developed structures were of human origin and derived from the implanted cells. Applying SVF cells without precultivation in vitro but comparing two different fibrin carriers, namely stable fibrin and TissuCol gels, revealed that TissuCol profoundly supported adipose formation by SVF cells in vivo. This was contrasted by only minor SVF cell development and a strong reduction of cell numbers in stable fibrin gels implanted without precultivation. Histomorphometric analysis of adipocytes and capillary structures was conducted to verify the qualitative results, concluding that particularly SVF cells in TissuCol were highly suited for adipose regeneration in vivo. Employing the established WMS technique, the close interaction of mature adipocytes and blood vessels in TissuCol constructs was impressively shown and via species-specific human vimentin staining, the expected strong involvement of implanted SVF cells in the formation of coherent adipose tissue was confirmed (Chapter 7). With the development of biodegradable volume-stable adipose tissue constructs, the application of ASCs and SVF cells as two promising cell sources for functional adipose regeneration, as well as the thorough evaluation of strategies for construct vascularization in vitro and in vivo, this thesis provides valuable solutions to current challenges in adipose tissue engineering. The presented findings further open up new perspectives for innovative treatments to cure soft tissue defects and serve as a basis for directed approaches towards the generation of clinically applicable soft tissue substitutes.}, subject = {Tissue Engineering}, language = {en} } @phdthesis{Witek2014, author = {Witek, Maximilian}, title = {Multiobjective Traveling Salesman Problems and Redundancy of Complete Sets}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110740}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {The first part of this thesis deals with the approximability of the traveling salesman problem. This problem is defined on a complete graph with edge weights, and the task is to find a Hamiltonian cycle of minimum weight that visits each vertex exactly once. We study the most important multiobjective variants of this problem. In the multiobjective case, the edge weights are vectors of natural numbers with one component for each objective, and since weight vectors are typically incomparable, the optimal Hamiltonian cycle does not exist. Instead we consider the Pareto set, which consists of those Hamiltonian cycles that are not dominated by some other, strictly better Hamiltonian cycles. The central goal in multiobjective optimization and in the first part of this thesis in particular is the approximation of such Pareto sets. We first develop improved approximation algorithms for the two-objective metric traveling salesman problem on multigraphs and for related Hamiltonian path problems that are inspired by the single-objective Christofides' heuristic. We further show arguments indicating that our algorithms are difficult to improve. Furthermore we consider multiobjective maximization versions of the traveling salesman problem, where the task is to find Hamiltonian cycles with high weight in each objective. We generalize single-objective techniques to the multiobjective case, where we first compute a cycle cover with high weight and then remove an edge with low weight in each cycle. Since weight vectors are often incomparable, the choice of the edges of low weight is non-trivial. We develop a general lemma that solves this problem and enables us to generalize the single-objective maximization algorithms to the multiobjective case. We obtain improved, randomized approximation algorithms for the multiobjective maximization variants of the traveling salesman problem. We conclude the first part by developing deterministic algorithms for these problems. The second part of this thesis deals with redundancy properties of complete sets. We call a set autoreducible if for every input instance x we can efficiently compute some y that is different from x but that has the same membership to the set. If the set can be split into two equivalent parts, then it is called weakly mitotic, and if the splitting is obtained by an efficiently decidable separator set, then it is called mitotic. For different reducibility notions and complexity classes, we analyze how redundant its complete sets are. Previous research in this field concentrates on polynomial-time computable reducibility notions. The main contribution of this part of the thesis is a systematic study of the redundancy properties of complete sets for typical complexity classes and reducibility notions that are computable in logarithmic space. We use different techniques to show autoreducibility and mitoticity that depend on the size of the complexity class and the strength of the reducibility notion considered. For small complexity classes such as NL and P we use self-reducible, complete sets to show that all complete sets are autoreducible. For large complexity classes such as PSPACE and EXP we apply diagonalization methods to show that all complete sets are even mitotic. For intermediate complexity classes such as NP and the remaining levels of the polynomial-time hierarchy we establish autoreducibility of complete sets by locally checking computational transcripts. In many cases we can show autoreducibility of complete sets, while mitoticity is not known to hold. We conclude the second part by showing that in some cases, autoreducibility of complete sets at least implies weak mitoticity.}, subject = {Mehrkriterielle Optimierung}, language = {en} } @article{WirtzGraviusAscherletal.2014, author = {Wirtz, Dieter C. and Gravius, Sascha and Ascherl, Rudolf and Thorweihe, Miguel and Forst, Raimund and Noeth, Ulrich and Maus, Uwe M. and Wimmer, Matthias D. and Zeiler, Guenther and Deml, Moritz C.}, title = {Uncemented femoral revision arthroplasty using a modular tapered, fluted titanium stem 5-to 16-year results of 163 cases}, series = {Acta Orthopaedica}, volume = {85}, journal = {Acta Orthopaedica}, number = {6}, issn = {1745-3674}, doi = {10.3109/17453674.2014.958809}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114555}, pages = {562 - 569}, year = {2014}, abstract = {Background and purpose - Due to the relative lack of reports on the medium- to long-term clinical and radiographic results of modular femoral cementless revision, we conducted this study to evaluate the medium- to long-term results of uncemented femoral stem revisions using the modular MRP-TITAN stem with distal diaphyseal fixation in a consecutive patient series. Patients and methods - We retrospectively analyzed 163 femoral stem revisions performed between 1993 and 2001 with a mean follow-up of 10 (5-16) years. Clinical assessment included the Harris hip score (HHS) with reference to comorbidities and femoral defect sizes classified by Charnley and Paprosky. Intraoperative and postoperative complications were analyzed and the failure rate of the MRP stem for any reason was examined. Results - Mean HHS improved up to the last follow-up (37 (SD 24) vs. 79 (SD 19); p < 0.001). 99 cases (61\%) had extensive bone defects (Paprosky IIB-III). Radiographic evaluation showed stable stem anchorage in 151 cases (93\%) at the last follow-up. 10 implants (6\%) failed for various reasons. Neither a breakage of a stem nor loosening of the morse taper junction was recorded. Kaplan-Meier survival analysis revealed a 10-year survival probability of 97\% (95\% CI: 95-100). Interpretation - This is one of the largest medium- to longterm analyses of cementless modular revision stems with distal diaphyseal anchorage. The modular MRP-TITAN was reliable, with a Kaplan-Meier survival probability of 97\% at 10 years.}, language = {en} } @article{WirthGlushakovaScheuermayeretal.2014, author = {Wirth, Christine C. and Glushakova, Svetlana and Scheuermayer, Matthias and Repnik, Urska and Garg, Swatl and Schaack, Dominik and Kachman, Marika M. and Weißbach, Tim and Zimmerberg, Joshua and Dandekar, Thomas and Griffiths, Gareth and Chitnis, Chetan E. and Singh, Shallja and Fischer, Rainer and Pradel, Gabriele}, title = {Perforin-like protein PPLP2 permeabilizes the red blood cell membrane during egress of Plasmodium falciparum gametocytes}, series = {Cellular Microbiology}, volume = {16}, journal = {Cellular Microbiology}, number = {5}, doi = {10.1111/cmi.12288}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120895}, pages = {709-33}, year = {2014}, abstract = {Egress of malaria parasites from the host cell requires the concerted rupture of its enveloping membranes. Hence, we investigated the role of the plasmodial perforin-like protein PPLP2 in the egress of Plasmodium falciparum from erythrocytes. PPLP2 is expressed in blood stage schizonts and mature gametocytes. The protein localizes in vesicular structures, which in activated gametocytes discharge PPLP2 in a calcium-dependent manner. PPLP2 comprises a MACPF domain and recombinant PPLP2 has haemolytic activities towards erythrocytes. PPLP2-deficient [PPLP2(-)] merozoites show normal egress dynamics during the erythrocytic replication cycle, but activated PPLP2(-) gametocytes were unable to leave erythrocytes and stayed trapped within these cells. While the parasitophorous vacuole membrane ruptured normally, the activated PPLP2(-) gametocytes were unable to permeabilize the erythrocyte membrane and to release the erythrocyte cytoplasm. In consequence, transmission of PPLP2(-) parasites to the Anopheles vector was reduced. Pore-forming equinatoxin II rescued both PPLP2(-) gametocyte exflagellation and parasite transmission. The pore sealant Tetronic 90R4, on the other hand, caused trapping of activated wild-type gametocytes within the enveloping erythrocytes, thus mimicking the PPLP2(-) loss-of-function phenotype. We propose that the haemolytic activity of PPLP2 is essential for gametocyte egress due to permeabilization of the erythrocyte membrane and depletion of the erythrocyte cytoplasm.}, language = {en} } @misc{Wintjes2014, author = {Wintjes, Jorit}, title = {Heinz-G{\"u}nther Nesselrath, Libanios. Zeuge einer schwindenden Welt, Standorte in Antike und Christentum 4, Stuttgart (Hiersemann) 2012, VII + 165 S., ISBN: 978-3-7772-1208-1, € 39,-.}, series = {Zeitschrift f{\"u}r Antikes Christentum / Journal of Ancient Christianity}, volume = {18}, journal = {Zeitschrift f{\"u}r Antikes Christentum / Journal of Ancient Christianity}, number = {2}, issn = {1612-961X}, doi = {10.1515/zac-2014-0016}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-194140}, pages = {326-354}, year = {2014}, abstract = {Kein Abstract verf{\"u}gbar.}, language = {de} } @phdthesis{Winkler2014, author = {Winkler, Markus Heinrich}, title = {Motivational properties of reward associated stimuli - Conditioning studies with smoke and monetary reinforcement}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121794}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Abstract Tobacco addiction is considered as a chronic relapsing disorder, characterized by compul-sive drug seeking and intake. Learning processes are stressed to account for the situational-specific expression of core features of the disorder, e.g., craving for drug, tolerance and ex-cessive consumption. According to incentive theories, smoke conditioned stimuli are hy-pothesized to be appetitive in nature, promoting craving, approach and consummatory be-havior. Commonly, smoking cues are treated as simple excitatory conditioned stimuli formed by a close and reliable overlap with the drug effect. However, the smoking ritual comprises a multitude of stimuli which may give rise to different forms of learning and con-ditioned responses partially opposing each other. Previous research suggests the predictive content and the temporal proximity of smoking stimuli to the drug effect as important de-terminants of cue reactivity. In contrast to stimuli related to the preparatory stage of smok-ing and the start of consumption (BEGIN stimuli), stimuli from the terminal stage of smok-ing (END stimuli) apparently lack high cue reactivity. Several lines of evidence suggest the poor cue properties of terminal stimuli to be related to their signaling of poor smoke availa-bility. Indeed, cue reactivity is commonly decreased when smoking appears to be unavaila-ble. Moreover, the learning literature suggests that stimuli predictive for the non-availability of reward may acquire the capacity to modulate or oppose the responses of ex-citatory conditioned stimuli. Therefore, the aim of the present thesis was to enhance our knowledge of stimulus control in human drug addiction and incentive motivation by running a series of conditioning studies with smoke intake and monetary reward as reinforcer. Sub-jective report and physiological measures of motivational valence and consummatory re-sponse tendencies were used as dependent variables. The first experiment of this thesis used a differential conditioning paradigm to reveal evi-dence for the conditioning of preparatory and consummatory responses to a CS+ for smok-ing. Neutral pictograms served as CSs and single puffs on a cigarette as US. In line with the predictions of incentive theories, the excitatory CS+ for smoking acquired the ability to evoke an appetitive conditioned response, as indicated by enhanced activity of the M. zy-gomaticus major. Moreover, anticipation of puffing on the cigarette increased the activity of the M. orbicularis oris (lip muscle), indicating the activation of consummatory response tendencies. Finally, the CS+ evoked stronger skin conductance responses, indicative of in-creased autonomic arousal and orienting in preparation for action. In contrast, the rating data were apparently unaffected by the experimental contingency. In sum, the physiological data provide support for the notion that excitatory smoke conditioning gives rise to appeti-tive and consummatory conditioned responses, which may at least partially contribute to the maintenance of tobacco addiction. The second experiment of this thesis adapted the conditioning protocol of the first study to probe the functional significance of terminal stimuli in the control of addictive behavior. This study manipulated the predictive relationship of BEGIN and END stimuli to smoke rein-forcement to provide further support for the differential reactivity to both stimuli and the retarded (i.e., delayed) conditioning of END stimuli. Overall, the results of the first study of this thesis were conceptually replicated as the association of a BEGIN stimulus with smoke intake resulted in the acquisition of appetitive and consummatory physiological responses. Importantly, the results revealed evidence for a retarded excitatory conditioning of END stimuli. Thus, pairing of an END stimulus with smoke intake failed to produce a conditioned discrimination in terms of motivational valence and autonomic arousal, as indicated by the activity of the M. corrugator supercilii and the skin conductance data. These results provide further support for the notion that END stimuli may be weak cues for smoking. Moreover, in light of the results of the first study of this thesis, the retarded excitatory conditioning of terminal stimuli may be suggestive of an inhibitory response component, which may be re-lated to their signaling of poor smoke availability. In sum, these results add to a growing body of data, which suggest that the expression of cue reactivity may be modulated by the temporal proximity and the availability of the drug effect. The aim of the third study of this thesis was to provide "proof of concept" for an inhibi-tory conditioning notion of terminal stimuli. In this analog study BEGIN and END stimuli were emulated as discriminative SD and S for monetary reward. During an acquisition phase conditioned inhibition was established to the S predictive of the non-availability of re-ward. Subsequently a retardation test was used to substantiate conditioned inhibition. In this test, excitatory conditioning of the previous S was compared to the excitatory condi-tioning of a novel control stimulus. Importantly, the results revealed evidence for reward conditioned inhibition as indicated by the retarded acquisition of subjective (pleasure and reward expectancy) and physiological (skin conductance and activity of the M. orbicularis oculi) responses. In sum, these results provide support for the notion that stimuli predictive for the non-availability of reward may acquire the capacity to oppose the responses of ex-citatory conditioned stimuli. Thus, future research may benefit from the consideration of inhibitory conditioning processes in drug addiction, which may be of theoretical, methodo-logical and clinical importance. In sum, the present thesis revealed evidence for 1) an appetitive nature of excitatory condi-tioned smoking cues, 2) the dependency of this learning process on the temporal position of the conditioned stimuli in the intake ritual and 3) the acquisition of conditioned inhibition by a stimulus predictive for the non-availability of reward, as evident in retarded excitatory conditioning. Overall, these studies made a novel contribution to the field of human drug addiction and incentive motivation and provided valuable suggestions for further research.}, subject = {Rauchen}, language = {en} } @article{WilhelmSmetakSchaeferEckartetal.2014, author = {Wilhelm, Martin and Smetak, Manfred and Schaefer-Eckart, Kerstin and Kimmel, Brigitte and Birkmann, Josef and Einsele, Hermann and Kunzmann, Volker}, title = {Successful adoptive transfer and in vivo expansion of haploidentical γδ T cells}, series = {Journal of Translational Medicine}, volume = {12}, journal = {Journal of Translational Medicine}, number = {45}, doi = {10.1186/1479-5876-12-45}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117290}, year = {2014}, abstract = {Background: The primary aim of this pilot study was to determine the feasibility and safety of an adoptive transfer and in vivo expansion of human haploidentical gamma delta T lymphocytes. Methods: Patients with advanced haematological malignancies who are not eligible for allogeneic transplantation received peripheral blood mononuclear cells from half-matched family donors. For that, a single unstimulated leukapheresis product was incubated with both the anti-CD4 and anti-CD8 antibodies conjugated to paramagnetic particles. The depletion procedure was performed on a fully automated CliniMACS (R) device according to the manufacturer's instructions. On average, patients received 2.17 x 10(6)/kg (range 0.9-3.48) γδ T cells with <1\% CD4-or CD8-positive cells remaining in the product. All patients received prior lymphopenia-inducing chemotherapy (fludarabine 20-25 mg/m(2) day -6 until day -2 and cyclophosphamide 30-60 mg/kg day -6 and -5) and were treated with 4 mg zoledronate on day 0 and 1.0x10(6) IU/m(2) IL-2 on day +1 until day +6 for the induction of gamma delta T cell proliferation in vivo. Results: This resulted in a marked in vivo expansion of donor γδ T cells and, to a lower extent, natural killer cells and double-negative αβ T cells (mean 68-fold, eight-fold, and eight-fold, respectively). Proliferation peaked by around day +8 and donor cells persisted up to 28 days. Although refractory to all prior therapies, three out of four patients achieved a complete remission, which lasted for 8 months in a patient with plasma cell leukaemia. One patient died from an infection 6 weeks after treatment. Conclusion: This pilot study shows that adoptive transfer and in vivo expansion of haploidentical γδ T lymphocytes is feasible and suggests a potential role of these cells in the treatment of haematological diseases.}, language = {en} } @article{WieserGerdesReichertsetal.2014, author = {Wieser, Matthias J. and Gerdes, Antje B. M. and Reicherts, Philipp and Pauli, Paul}, title = {Mutual influences of pain and emotional face processing}, series = {Frontiers in Psychology}, volume = {5}, journal = {Frontiers in Psychology}, issn = {1664-1078}, doi = {10.3389/fpsyg.2014.01160}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-118446}, pages = {1160}, year = {2014}, abstract = {The perception of unpleasant stimuli enhances whereas the perception of pleasant stimuli decreases pain perception. In contrast, the effects of pain on the processing of emotional stimuli are much less known. Especially given the recent interest in facial expressions of pain as a special category of emotional stimuli, a main topic in this research line is the mutual influence of pain and facial expression processing. Therefore, in this mini-review we selectively summarize research on the effects of emotional stimuli on pain, but more extensively turn to the opposite direction namely how pain influences concurrent processing of affective stimuli such as facial expressions. Based on the motivational priming theory one may hypothesize that the perception of pain enhances the processing of unpleasant stimuli and decreases the processing of pleasant stimuli. This review reveals that the literature is only partly consistent with this assumption: pain reduces the processing of pleasant pictures and happy facial expressions, but does not - or only partly - affect processing of unpleasant pictures. However, it was demonstrated that pain selectively enhances the processing of facial expressions if these are pain-related (i.e., facial expressions of pain). Extending a mere affective modulation theory, the latter results suggest pain-specific effects which may be explained by the perception-action model of empathy. Together, these results underscore the important mutual influence of pain and emotional face processing.}, language = {en} } @article{WieserFlaischPauli2014, author = {Wieser, Matthias J. and Flaisch, Tobias and Pauli, Paul}, title = {Raised Middle-Finger: Electrocortical Correlates of Social Conditioning with Nonverbal Affective Gestures}, doi = {10.1371/journal.pone.0102937}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-113061}, year = {2014}, abstract = {Humans form impressions of others by associating persons (faces) with negative or positive social outcomes. This learning process has been referred to as social conditioning. In everyday life, affective nonverbal gestures may constitute important social signals cueing threat or safety, which therefore may support aforementioned learning processes. In conventional aversive conditioning, studies using electroencephalography to investigate visuocortical processing of visual stimuli paired with danger cues such as aversive noise have demonstrated facilitated processing and enhanced sensory gain in visual cortex. The present study aimed at extending this line of research to the field of social conditioning by pairing neutral face stimuli with affective nonverbal gestures. To this end, electro-cortical processing of faces serving as different conditioned stimuli was investigated in a differential social conditioning paradigm. Behavioral ratings and visually evoked steady-state potentials (ssVEP) were recorded in twenty healthy human participants, who underwent a differential conditioning procedure in which three neutral faces were paired with pictures of negative (raised middle finger), neutral (pointing), or positive (thumbs-up) gestures. As expected, faces associated with the aversive hand gesture (raised middle finger) elicited larger ssVEP amplitudes during conditioning. Moreover, theses faces were rated as to be more arousing and unpleasant. These results suggest that cortical engagement in response to faces aversively conditioned with nonverbal gestures is facilitated in order to establish persistent vigilance for social threat-related cues. This form of social conditioning allows to establish a predictive relationship between social stimuli and motivationally relevant outcomes.}, language = {en} } @article{WiegeringSchmidAndresetal.2014, author = {Wiegering, Verena and Schmid, Sophie and Andres, Oliver and Wirth, Clemens and Wiegering, Armin and Meyer, Thomas and Winkler, Beate and Schlegel, Paul G. and Eyrich, Matthias}, title = {Thrombosis as a complication of central venous access in pediatric patients with malignancies: a 5-year single-center experience}, doi = {10.1186/2052-1839-14-18}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110476}, year = {2014}, abstract = {Background Reliable central venous access (CVC) is essential for hematology-oncology patients since frequent puncture of peripheral veins—e.g., for chemotherapy, antibiotic administration, repeated blood sampling, and monitoring—can cause unacceptable pain and psychological trauma, as well as severe side effects in cases of extravasation of chemotherapy drugs. However, CVC lines still carry major risk factors, including thrombosis, infection (e.g., entry site, tunnel, and luminal infections), and catheter dislocation, leakage, or breakage. Methods Here we performed a retrospective database analysis to determine the incidence of CVC-associated thrombosis in a single-center cohort of 448 pediatric oncologic patients, and to analyze whether any subgroup of patients was at increased risk and thus might benefit from prophylactic anticoagulation. Results Of the 448 patients, 269 consecutive patients received a CVC, and 55 of these 269 patients (20\%) also had a thrombosis. Of these 55 patients, 43 had at least one CVC-associated thrombosis (total number of CVC-associated thrombosis: n = 52). Among all patients, the median duration of CVC exposure was 464 days. Regarding exposure time, no significant difference was found between patients with and without CVC-associated thrombosis. Subclavia catheters and advanced tumor stages seem to be the main risk factors for the development of CVC-associated thrombosis, whereas pharmacologic prophylaxis did not seem to have a relevant impact on the rate of thrombosis. Conclusions We conclude that pediatric surgeons and oncologists should pay close attention to ensuring optimal and accurate CVC placement, as this appears the most effective tool to minimize CVC-associated complications.}, language = {en} } @article{WiegeringKorbThalheimeretal.2014, author = {Wiegering, Armin and Korb, Doreen and Thalheimer, Andreas and K{\"a}mmerer, Ulrike and Allmanritter, Jan and Matthes, Niels and Linnebacher, Michael and Schlegel, Nicolas and Klein, Ingo and Erg{\"u}n, S{\"u}leyman and Germer, Christoph-Thomas and Otto, Christoph}, title = {E7080 (Lenvatinib), a Multi-Targeted Tyrosine Kinase Inhibitor, Demonstrates Antitumor Activities Against Colorectal Cancer Xenografts}, doi = {10.1016/j.neo.2014.09.008}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-111165}, year = {2014}, abstract = {Clinical prognosis of metastasized colorectal carcinoma (CRC) is still not at desired levels and novel drugs are needed. Here, we focused on the multi-tyrosine kinase inhibitor E7080 (Lenvatinib) and assessed its therapeutic efficacy against human CRC cell lines in vitro and human CRC xenografts in vivo. The effect of E7080 on cell viability was examined on 10 humanCRCcell lines and humanendothelial cells (HUVEC). The inhibitory effect of E7080 on VEGF-induced angiogenesis was studied in an ex vivo mouse aortic ring angiogenesis assay. In addition, the efficacy of E7080 against xenografts derived fromCRC cell lines and CRC patient resection specimenswithmutated KRASwas investigated in vivo. Arelatively low cytotoxic effect of E7080 on CRC cell viabilitywas observed in vitro. Endothelial cells (HUVEC)weremore susceptible to the incubation with E7080. This is in line with the observation that E7080 demonstrated an anti-angiogenic effect in a three-dimensional ex vivo mouse aortic ring angiogenesis assay. E7080 effectively disrupted CRC cell-mediated VEGF-stimulated growth of HUVEC in vitro. Daily in vivo treatment with E7080 (5 mg/kg) significantly delayed the growth of KRAS mutated CRC xenografts with decreased density of tumor-associated vessel formations and without tumor regression. This observation is in line with results that E7080 did not significantly reduce the number of Ki67-positive cells in CRC xenografts. The results suggest antiangiogenic activity of E7080 at a dosage thatwas well tolerated by nudemice. E7080 may provide therapeutic benefits in the treatment of CRC with mutated KRAS.}, language = {en} } @article{WiegeringIsbertDietzetal.2014, author = {Wiegering, Armin and Isbert, Christoph and Dietz, Ulrich A. and Kunzmann, Volker and Ackermann, Sabine and Kerscher, Alexander and Maeder, Uwe and Flentje, Michael and Schlegel, Nicolas and Reibetanz, Joachim and Germer, Christoph-Thomas and Klein, Ingo}, title = {Multimodal therapy in treatment of rectal cancer is associated with improved survival and reduced local recurrence - a retrospective analysis over two decades}, doi = {10.1186/1471-2407-14-816}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110606}, year = {2014}, abstract = {Background The management of rectal cancer (RC) has substantially changed over the last decades with the implementation of neoadjuvant chemoradiotherapy, adjuvant therapy and improved surgery such as total mesorectal excision (TME). It remains unclear in which way these approaches overall influenced the rate of local recurrence and overall survival. Methods Clinical, histological and survival data of 658 out of 662 consecutive patients with RC were analyzed for treatment and prognostic factors from a prospectively expanded single-institutional database. Findings were then stratified according to time of diagnosis in patient groups treated between 1993 and 2001 and 2002 and 2010. Results The study population included 658 consecutive patients with rectal cancer between 1993 and 2010. Follow up data was available for 99.6\% of all 662 treated patients. During the time period between 2002 and 2010 significantly more patients underwent neoadjuvant chemoradiotherapy (17.6\% vs. 60\%) and adjuvant chemotherapy (37.9\% vs. 58.4\%). Also, the rate of reported TME during surgery increased. The rate of local or distant metastasis decreased over time, and tumor related 5-year survival increased significantly with from 60\% to 79\%. Conclusion In our study population, the implementation of treatment changes over the last decade improved the patient's outcome significantly. Improvements were most evident for UICC stage III rectal cancer.}, language = {en} } @article{WiedmannHeuschmannHillmannetal.2014, author = {Wiedmann, Silke and Heuschmann, Peter U. and Hillmann, Steffi and Busse, Otto and Wiethoelter, Horst and Walter, Georg M. and Seidel, Guenter and Misselwitz, Bjoern and Janssen, Alfred and Berger, Klaus and Burmeister, Christoph and Matthias, Christine and Kolominsky-Rabas, Peter and Hermanek, Peter}, title = {The Quality of Acute Stroke Care-an Analysis of Evidence-Based Indicators in 260 000 Patients}, series = {Deutsches {\"A}rzteblatt International}, volume = {111}, journal = {Deutsches {\"A}rzteblatt International}, number = {45}, issn = {1866-0452}, doi = {10.3238/arztebl.2014.0759}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114747}, pages = {759-765}, year = {2014}, abstract = {Background: Stroke patients should be cared for in accordance with evidence-based guidelines. The extent of implementation of guidelines for the acute care of stroke patients in Germany has been unclear to date. Methods: The regional quality assurance projects that cooperate in the framework of the German Stroke Registers Study Group (Arbeitsgemeinschaft Deutscher Schlaganfall-Register, ADSR) collected data on the care of stroke patients in 627 hospitals in 2012. The quality of the acute hospital care of patients with stroke or transient ischemic attack (TIA) was assessed on the basis of 15 standardized, evidence-based quality indicators and compared across the nine participating regional quality assurance projects. Results: Data were obtained on more than 260 000 patients nationwide. Intravenous thrombolysis was performed in 59.7\% of eligible ischemic stroke patients patients (range among participating projects, 49.7-63.6\%). Dysphagia screening was documented in 86.2\% (range, 74.8-93.1\%). For the following indicators, the defined targets were not reached for all of Germany: antiaggregation within 48 hours, 93.4\% (range, 86.6-96.4\%); anticoagulation for atrial fibrillation, 77.6\% (range, 72.4-80.1\%); standardized dysphagia screening, 86.2\% (range, 74.8-93.1\%); oral and written information of the patients or their relatives, 86.1\% (range, 75.4-91.5\%). The rate of patients examined or treated by a speech therapist was in the target range. Conclusion: The defined targets were reached for most of the quality indicators. Some indicators, however, varied widely across regional quality assurance projects. This implies that the standardization of care for stroke patients in Germany has not yet been fully achieved.}, language = {en} } @phdthesis{Wieching2014, author = {Wieching, Anna}, title = {Pandemische Influenza A (H1N1) 2009- assoziierte Hospitalisationen bei Kindern und Jugendlichen im Raum W{\"u}rzburg, Bayern}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119041}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Influenza geh{\"o}rt zu den h{\"a}ufigsten respiratorischen Erkrankungen im Kindesalter. Auf Grund der raschen weltweiten Verbreitung des im Fr{\"u}hjahr 2009 neu aufgetretenen pandemischen Influenza A (H1N1) 2009- Virus rief die Weltgesundheitsorganisation (WHO) am 11. Juni 2009 die h{\"o}chste Pandemiestufe aus. Ziel der vorliegenden Studie war es, alle hospitalisierten Kinder < 18 Jahren im Raum W{\"u}rzburg mit laborchemischem Nachweis von pandemischer Influenza A (H1N1) 2009 (PIA) zu erfassen und den klinischen Verlauf sowie die aufgetretenen Komplikationen zu beschreiben. Weiterhin wurde die PIA-assoziierte Hospitalisations-Inzidenz f{\"u}r das Haupteinzugsgebiet der Kliniken f{\"u}r verschiedene Altersgruppen berechnet und mit Hospitalisations-Inzidenzen f{\"u}r saisonale Influenza der Saisons 2006/2007 bis 2008/2009 verglichen. Im Zeitraum von Juli 2009 bis M{\"a}rz 2010 waren 94 Kinder < 18 Jahren (62\% m{\"a}nnlich) mit einer PIA-Infektion in station{\"a}rer Behandlung. Das Alter der Patienten lag im Median bei 7,1 Jahren (IQR: 3-12 Jahre). Eine Vorerkrankung bestand bei 40 Kindern (43\%), wobei hier Adipositas (n=12, 30\% der 40 Patienten mit Grunderkrankung), Asthma bronchiale (n=10, 25\%) und neurologische Erkrankungen (n=8, 20\%) am h{\"a}ufigsten waren. Die h{\"a}ufigsten Symptome bei station{\"a}rer Aufnahme waren Husten (n=75, 80\% der 94 Patienten), Fieber (n=73, 78\%) und Rhinitis (n=48, 51\%). Eine Komplikation der PIA trat bei 37 Kindern (39\%) auf, am h{\"a}ufigsten war eine Infektion der unteren Luftwege. Sechzehn Kinder (17\%) ben{\"o}tigten eine Sauerstoffsupplementierung und drei Kinder (3\%) wurden maschinell beatmet. Sechs Kinder (6\%) wurden intensivstation{\"a}r behandelt. Lediglich 3 Kinder (3\%) waren gegen PIA und eines (1\%) gegen saisonale Influenza geimpft. Die gesch{\"a}tzte Hospitalisations-Inzidenz im W{\"u}rzburger Raum lag bei 118/100.000 f{\"u}r Kinder unter 18 Jahren und war am h{\"o}chsten f{\"u}r Kinder unter einem Jahr (242/100.000). Die Hospitalisations-Inzidenz f{\"u}r saisonale Influenza A f{\"u}r Kinder unter 18 Jahren war in den drei vorhergehenden Saisons 2006/2007, 2007/2008 und 2008/2009 mit 41-97/100.000 niedriger als f{\"u}r PIA. Neben den 94 ambulant erworbenen Infektionen traten sieben nosokomiale Infektionen auf. Hierunter war ein Todesfall bei einem 16-j{\"a}hrigen M{\"a}dchen mit schweren Grunderkrankungen zu verzeichnen. Trotz der hohen Hospitalisierungs-Inzidenz verlief der {\"u}berwiegende Anteil an PIA-assoziierten Hospitalisierungen ohne schwere Komplikationen. Kinder mit einer Grunderkrankung waren h{\"a}ufiger von einer Komplikation der PIA betroffen und nur ein geringer Anteil dieser Patienten war gegen Influenza geimpft, obwohl eine explizite Impfempfehlung der St{\"a}ndigen Impfkommission am Robert Koch-Institut f{\"u}r diese Patientengruppe besteht. H{\"o}here Durchimpfungsraten sind notwendig, um die Krankheitslast und das Auftreten von Komplikationen zu reduzieren. Derzeit wird daher die Einf{\"u}hrung einer generellen Empfehlung der Impfung gegen Influenza f{\"u}r Kinder diskutiert.}, subject = {Schweineinfluenza}, language = {de} } @phdthesis{WeyhmuellerReboredo2014, author = {Weyhm{\"u}ller Reboredo, Jenny}, title = {Tissue Engineering eines Meniskus - Vom Biomaterial zum Implantat}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-108477}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Der Meniskus, ein scheibenf{\"o}rmiger Faserknorpel, spielt im Kniegelenk eine bedeutende Rolle, weil er Kr{\"a}fte und Druck im Kniegelenk gleichm{\"a}ßig verteilt, St{\"o}ße d{\"a}mpft sowie der Kraft{\"u}bertragung und Stabilisierung dient. Durch die Entfernung des Gewebes, der sogenannten Totalmeniskektomie, nach einer Meniskusverletzung oder einem Riss, ver{\"a}ndern sich die mechanischen Eigenschaften des Gelenks stark und verursachen durch die erh{\"o}hte Belastung der Gelenkfl{\"a}chen Arthrose. Arthrose ist weltweit die H{\"a}ufigste aller Gelenkerkrankungen. Der Erhalt der k{\"o}rperlichen Leistungsf{\"a}higkeit und Mobilit{\"a}t bis ins hohe Alter sowie die Bewahrung der Gesundheit von Herz-Kreislauf- und Stoffwechselorganen z{\"a}hlen aufgrund des demografischen Wandels zu den großen medizinischen Herausforderungen. Die Erkrankung des muskuloskelettalen Systems stellte 2010 im Bundesgebiet die am h{\"a}ufigsten vorkommende Krankheitsart dar. W{\"a}hrend Risse in den {\"a}ußeren Teilen des Meniskus aufgrund des Anschlusses an das Blutgef{\"a}ßsystem spontan heilen k{\"o}nnen, k{\"o}nnen sie dies in tieferen Zonen nicht. Durch die begrenzte Heilungsf{\"a}higkeit des Knorpels bleibt langfristig der Einsatz eines Ersatzgewebes die einzige therapeutische Alternative. In der vorliegenden Arbeit wurde als therapeutische Alternative erfolgreich ein vaskularisiertes Meniskusersatzgewebe mit Methoden des Tissue Engineering entwickelt. Es soll in Zukunft als Implantat Verwendung finden. Tissue Engineering ist ein interdisziplin{\"a}res Forschungsfeld, in dem Gewebe außerhalb des K{\"o}rpers generiert werden. Schl{\"u}sselkomponenten sind Zellen, die aus einem Organismus isoliert werden, und Tr{\"a}gerstrukturen, die mit Zellen besiedelt werden. Die Biomaterialien geben den Zellen eine geeignete Umgebung, die die Extrazellul{\"a}re Matrix (EZM) ersetzen soll, um die Funktion der Zellen beizubehalten, eigene Matrix zu bilden. Zum Erhalt eines funktionelles Gewebes werden oftmals dynamische Kultursysteme, sogenannte Bioreaktoren, verwendet, die nat{\"u}rliche Stimuli wie beispielsweise den Blutfluss oder mechanische Kompressionskr{\"a}fte w{\"a}hrend der in vitro Reifungsphase des Gewebes, zur Verf{\"u}gung stellen. Das Gewebekonstrukt wurde auf Basis nat{\"u}rlicher Biomaterialien aufgebaut, unter Verwendung ausschließlich prim{\"a}rer Zellen, die sp{\"a}ter direkt vom Patienten gewonnen werden k{\"o}nnen und damit Abstoßungsreaktionen auszuschließen sind. Da der Meniskus teilvaskularisiert ist und die in vivo Situation des Gewebes bestm{\"o}glich nachgebaut werden sollte, wurden Konstrukte mit mehreren Zelltypen, sogenannte Ko-Kulturen aufgebaut. Neben mikrovaskul{\"a}ren Endothelzellen (mvEZ) und Meniskuszellen (MZ) erfolgten Versuche mit mesenchymalen Stammzellen (MSZ). Zur Bereitstellung einer zelltypspezifischen Matrixumgebung, diente den mvEZ ein St{\"u}ck Schweinedarm mit azellularisierten Gef{\"a}ßstrukturen (BioVaSc®) und den MZ diente eine geeig- nete Kollagenmatrix (Kollagen Typ I Hydrogel). Die Validierung und Charakterisierung des aufgebauten 3D Meniskuskonstrukts, welches in einem dynamischen Perfusions-Bioreaktorsystem kultiviert wurde, erfolgte mit knorpeltypischen Matrixmarkern wie Aggrekan, Kollagen Typ I, II und X sowie mit den Transkriptionsfaktoren RunX2 und Sox9, die in der Knorpelentstehung von großer Bedeutung sind. Zus{\"a}tzlich erfolgten Auswertungen mit endothelzellspezifischen Markern wie vWF, CD31 und VEGF, um die Vaskularisierung im Konstrukt nachzuweisen. Analysiert wurden auch die Zellvitalit{\"a}ten in den Konstrukten. Aufgrund einer nur geringen Verf{\"u}gbarkeit von MZ wurden Kulturans{\"a}tze mit alternativen Zellquellen, den MSZ, durchgef{\"u}hrt. Daf{\"u}r erfolgte zun{\"a}chst deren Isolation und Charakterisierung und die Auswahl einer geeigneten 3D Kollagenmatrix. Die beste Zellintegration der MSZ konnte auf einer eigens hergestellten elektrogesponnenen Matrix beobachtet werden. Die Matrix besteht aus zwei unterschiedlichen Kollagentypen, die auf insgesamt f{\"u}nf Schichten verteilt sind. Die Fasern besitzen weiter unterschiedliche Ausrichtungen. W{\"a}hrend die Kollagen Typ I Fasern in den {\"a}ußeren Schichten keiner Ausrichtung zugeh{\"o}ren, liegen die Kollagen Typ II Fasern in der mittleren Schicht parallel zueinander. Der native Meniskus war f{\"u}r den Aufbau einer solchen Kollagen-Tr{\"a}gerstruktur das nat{\"u}rliche Vorbild, das imitiert werden sollte. Nach der Besiedelung der Matrix mit MSZ, konnte eine Integration der Zellen bereits nach vier Tagen bis in die Mittelschicht sowie eine spontane chondrogene Differenzierung nach einer insgesamt dreiw{\"o}chigen Kultivierung gezeigt werden. Das Biomaterial stellt in Hinblick auf die Differenzierung der Zellen ohne die Zugabe von Wachstumsfaktoren eine relevante Bedeutung f{\"u}r klinische Studien dar. Zur Kultivierung des 3D Meniskuskonstrukts wurde ein Bioreaktor entwickelt. Mit diesem k{\"o}nnen neben Perfusion der Gef{\"a}ßsysteme zus{\"a}tzlich Kompressionskr{\"a}fte sowie Scherspannungen auf das Ersatzgewebe appliziert und die Differenzierung von MZ bzw. MSZ w{\"a}hrend der in vitro Kultur {\"u}ber mechanische Reize stimuliert werden. Ein anderes Anwendungsfeld f{\"u}r den neuartigen Bioreaktor ist seine Verwendung als Pr{\"u}ftestsystem f{\"u}r die Optimierung und Qualit{\"a}tssicherung von Gewebekonstrukten.}, subject = {Tissue Engineering}, language = {de} } @phdthesis{Westermann2014, author = {Westermann, Alexander J.}, title = {Dual RNA-seq of pathogen and host}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112462}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {The infection of a eukaryotic host cell by a bacterial pathogen is one of the most intimate examples of cross-kingdom interactions in biology. Infection processes are highly relevant from both a basic research as well as a clinical point of view. Sophisticated mechanisms have evolved in the pathogen to manipulate the host response and vice versa host cells have developed a wide range of anti-microbial defense strategies to combat bacterial invasion and clear infections. However, it is this diversity and complexity that makes infection research so challenging to technically address as common approaches have either been optimized for bacterial or eukaryotic organisms. Instead, methods are required that are able to deal with the often dramatic discrepancy between host and pathogen with respect to various cellular properties and processes. One class of cellular macromolecules that exemplify this host-pathogen heterogeneity is given by their transcriptomes: Bacterial transcripts differ from their eukaryotic counterparts in many aspects that involve both quantitative and qualitative traits. The entity of RNA transcripts present in a cell is of paramount interest as it reflects the cell's physiological state under the given condition. Genome-wide transcriptomic techniques such as RNA-seq have therefore been used for single-organism analyses for several years, but their applicability has been limited for infection studies. The present work describes the establishment of a novel transcriptomic approach for infection biology which we have termed "Dual RNA-seq". Using this technology, it was intended to shed light particularly on the contribution of non-protein-encoding transcripts to virulence, as these classes have mostly evaded previous infection studies due to the lack of suitable methods. The performance of Dual RNA-seq was evaluated in an in vitro infection model based on the important facultative intracellular pathogen Salmonella enterica serovar Typhimurium and different human cell lines. Dual RNA-seq was found to be capable of capturing all major bacterial and human transcript classes and proved reproducible. During the course of these experiments, a previously largely uncharacterized bacterial small non-coding RNA (sRNA), referred to as STnc440, was identified as one of the most strongly induced genes in intracellular Salmonella. Interestingly, while inhibition of STnc440 expression has been previously shown to cause a virulence defect in different animal models of Salmonellosis, the underlying molecular mechanisms have remained obscure. Here, classical genetics, transcriptomics and biochemical assays proposed a complex model of Salmonella gene expression control that is orchestrated by this sRNA. In particular, STnc440 was found to be involved in the regulation of multiple bacterial target mRNAs by direct base pair interaction with consequences for Salmonella virulence and implications for the host's immune response. These findings exemplify the scope of Dual RNA-seq for the identification and characterization of novel bacterial virulence factors during host infection.}, subject = {Transkriptomanalyse}, language = {en} } @article{WernerLapaBluemeletal.2014, author = {Werner, Rudolf A. and Lapa, Constantin and Bluemel, Christina and L{\"u}ckerath, Katharina and Schirbel, Andreas and Strate, Alexander and Buck, Andreas K. and Herrmann, Ken}, title = {Influence of the amount of co-infused amino acids on post-therapeutic potassium levels in peptide receptor radionuclide therapy}, doi = {10.1186/s13550-014-0046-2}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110617}, year = {2014}, abstract = {Background Peptide receptor radionuclide therapy (PRRT) is routinely used for advanced or metastasized neuroendocrine tumours (NET). To prevent nephrotoxicity, positively charged amino acids (AA) are co-infused. The aim of this study was to correlate the risk for therapy-related hyperkalaemia with the total amount of AA infused. Methods Twenty-two patients undergoing PRRT with standard activities of 177Lu-DOTATATE/-TOC were monitored during two following treatment cycles with co-infusion of 75 and 50 g of AA (L-arginine and L-lysine), respectively. Mean serum levels of potassium and other parameters (glomerular filtration rate [GFR], creatinine, blood urea nitrogen [BUN], phosphate, chloride, lactate dehydrogenase) prior to, 4 h and 24 h after AA infusion were compared. Results Self-limiting hyperkalaemia (>5.0 mmol/l) resolving after 24 h occurred in 91\% (20/22) of patients in both protocols. Potassium levels, BUN, creatinine, GFR, phosphate, chloride and LDH showed a similar range at 4 h after co-infusion of 75 or 50 g of AA, respectively (p > 0.05). Only GFR and creatinine levels at 24 h varied significantly between the two co-infusion protocols (p < 0.05). Conclusions Hyperkalaemia is a frequent side effect of AA infusion in PRRT. Varying the dose of co-infused amino acids did not impact on the incidence and severity of hyperkalaemia.}, language = {en} } @phdthesis{Werner2014, author = {Werner, Katharina Julia}, title = {Adipose Tissue Engineering - In vitro Development of a subcutaneous fat layer and a vascularized adipose tissue construct utilizing extracellular matrix structures}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-104676}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Each year millions of plastic and reconstructive procedures are performed to regenerate soft tissue defects after, for example, traumata, deep burns or tumor resections. Tissue engineered adipose tissue grafts are a promising alternative to autologous fat transfer or synthetic implants to meet this demand for adipose tissue. Strategies of tissue engineering, especially the use of cell carriers, provide an environment for better cell survival, an easier positioning and supplemented with the appropriate conditions a faster vascularization in vivo. To successfully engineer an adipose tissue substitute for clinical use, it is crucial to know the actual intended application. In some areas, like the upper and lower extremities, only a thin subcutaneous fat layer is needed and in others, large volumes of vascularized fat grafts are more desirable. The use and interplay of stem cells and selected scaffolds were investigated and provide now a basis for the generation of fitted and suitable substitutes in two different application areas. Complex injuries of the upper and lower extremities, in many cases, lead to excessive scarring. Due to severe damage to the subcutaneous fat layer, a common sequela is adhesion formation to mobile structures like tendons, nerves, and blood vessels resulting in restricted motion and disabling pain [Moor 1996, McHugh 1997]. In order to generate a subcutaneous fat layer to cushion scarred tissue after substantial burns or injuries, different collagen matrices were tested for clinical handling and the ability to support adipogenesis. When testing five different collagen matrices, PermacolTM and StratticeTM showed promising characteristics; additionally both possess the clinical approval. Under culture conditions, only PermacolTM, a cross-linked collagen matrix, exhibited an excellent long-term stability. Ranking nearly on the same level was StratticeTM, a non-cross-linked dermal scaffold; it only exhibited a slight shrinkage. All other scaffolds tested were severely compromised in stability under culture conditions. Engineering a subcutaneous fat layer, a construct would be desirable with a thin layer of emerging fat for cushioning on one side, and a non-seeded other side for cell migration and host integration. With PermacolTM and StratticeTM, it was possible to produce constructs with ASC (adipose derived stem cells) seeded on one side, which could be adipogenically differentiated. Additionally, the thickness of the cell layer could be varied. Thereby, it becomes possible to adjust the thickness of the construct to the surrounding tissue. In order to reduce the pre-implantation time ex vivo and the costs, the culture time was varied by testing different induction protocols. An adipogenic induction period of only four days was demonstrated to be sufficient to obtain a substantial adipogenic differentiation of the applied ASC. Thus, seeded with ASC, PermacolTM and StratticeTM are suitable scaffolds to engineer subcutaneous fat layers for reconstruction of the upper and lower extremities, as they support adipogenesis and are appropriately thin, and therefore would not compromise the cosmesis. For the engineering of large-volume adipose tissue, adequate vascularization still represents a major challenge. With the objective to engineer vascularized fat pads, it is important to consider the slow kinetics of revascularization in vivo. Therefore, a decellularized porcine jejunum with pre-existing vascular structures and pedicles to connect to the host vasculature or the circulation of a bioreactor system was used. In a first step, the ability of a small decellularized jejunal section was tested for cell adhesion and for supporting adipogenic differentiation of hASC mono-cultures. Cell adhesion and adipogenic maturation of ASC seeded on the jejunal material was verified through histological and molecular analysis. After the successful mono-culture, the goal was to establish a MVEC (microvascular endothelial cells) and ASC co-culture; suitable culture conditions had to be found, which support the viability of both cell types and do not interfere with the adipogenic differentiation. After the elimination of EGF (epidermal growth factor) from the co-culture medium, substantial adipogenic maturation was observed. In the next step, a large jejunal segment (length 8 cm), with its pre-existing vascular structures and arterial/venous pedicles, was connected to the supply system of a custom-made bioreactor. After successful reseeding the vascular structure with endothelial cells, the lumen was seeded with ASC which were then adipogenically induced. Histological and molecular examinations confirmed adipogenic maturation and the existence of seeded vessels within the engineered construct. Noteworthily, a co-localization of adipogenically differentiating ASC and endothelial cells in vascular networks could be observed. So, for the first time a vascularized fat construct was developed in vitro, based on the use of a decellularized porcine jejunum. As this engineered construct can be connected to a supply system or even to a patient vasculature, it is versatile in use, for example, as transplant in plastic and reconstruction surgery, as model in basic research or as an in vitro drug testing system. To summarize, in this work a promising substitute for subcutaneous fat layer reconstruction, in the upper and lower extremities, was developed, and the first, as far as reported, in vitro generated adipose tissue construct with integrated vascular networks was successfully engineered.}, subject = {Tissue Engineering}, language = {en} } @phdthesis{Werner2014, author = {Werner, Jan}, title = {Numerical Simulations of Heavy Fermion Systems: From He-3 Bilayers to Topological Kondo Insulators}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112039}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Even though heavy fermion systems have been studied for a long time, a strong interest in heavy fermions persists to this day. While the basic principles of local moment formation, Kondo effect and formation of composite quasiparticles leading to a Fermi liquid, are under- stood, there remain many interesting open questions. A number of issues arise due to the interplay of heavy fermion physics with other phenomena like magnetism and superconduc- tivity. In this regard, experimental and theoretical investigations of He-3 can provide valuable insights. He-3 represents a unique realization of a quantum liquid. The fermionic nature of He-3 atoms, in conjunction with the absence of long-range Coulomb repulsion, makes this material an ideal model system to study Fermi liquid behavior. Bulk He-3 has been investigated for quite some time. More recently, it became possible to prepare and study layered He-3 systems, in particular single layers and bilayers. The pos- sibility of tuning various physical properties of the system by changing the density of He-3 and using different substrate materials makes layers of He-3 an ideal quantum simulator for investigating two-dimensional Fermi liquid phenomenology. In particular, bilayers of He-3 have recently been found to exhibit heavy fermion behavior. As a function of temperature, a crossover from an incoherent state with decoupled layers to a coherent Fermi liquid of composite quasiparticles was observed. This behavior has its roots in the hybridization of the two layers. The first is almost completely filled and subject to strong correlation effects, while the second layer is only partially filled and weakly correlated. The quasiparticles are formed due to the Kondo screening of localized moments in the first layer by the second-layer delocalized fermions, which takes place at a characteristic temperature scale, the coherence scale Tcoh. Tcoh can be tuned by changing the He-3 density. In particular, at a certain critical filling, the coherence scale is expected to vanish, corresponding to a divergence of the quasiparticle effective mass, and a breakdown of the Kondo effect at a quantum critical point. Beyond the critical point, the layers are decoupled. The first layer is a local moment magnet, while the second layer is an itinerant overlayer. However, already at a filling smaller than the critical value, preempting the critical point, the onset of a finite sample magnetization was observed. The character of this intervening phase remained unclear. Motivated by these experimental observations, in this thesis the results of model calcula- tions based on an extended Periodic Anderson Model are presented. The three particle ring exchange, which is the dominant magnetic exchange process in layered He-3, is included in the model. It leads to an effective ferromagnetic interaction between spins on neighboring sites. In addition, the model incorporates the constraint of no double occupancy by taking the limit of large local Coulomb repulsion. By means of Cellular DMFT, the model is investigated for a range of values of the chemical potential µ and inverse temperature β = 1/T . The method is a cluster extension to the Dy- namical Mean-Field Theory (DMFT), and allows to systematically include non-local correla- tions beyond the DMFT. The auxiliary cluster model is solved by a hybridization expansion CTQMC cluster solver, which provides unbiased, numerically exact results for the Green's function and other observables of interest. As a first step, the onset of Fermi liquid coherence is studied. At low enough temperature, the self-energy is found to exhibit a linear dependence on Matsubara frequency. Meanwhile, the spin susceptibility crossed over from a Curie-Weiss law to a Pauli law. Both observations serve as fingerprints of the Fermi liquid state. The heavy fermion state appears at a characteristic coherence scale Tcoh. This scale depends strongly on the density. While it is rather high for small filling, for larger filling Tcoh is increas- ingly suppressed. This involves a decreasing quasiparticle residue Z ∼ Tcoh and an enhanced mass renormalization m∗/m ∼ Tcoh-1. Extrapolation leads to a critical filling, where the co- herence scale is expected to vanish at a quantum critical point. At the same time, the effective mass diverges. This corresponds to a breakdown of the Kondo effect, which is responsible for the formation of quasiparticles, due to a vanishing of the effective hybridization between the layers. Taking only single-site DMFT results into account, the above scenario seems plausible. However, paramagnetic DMFT neglects the ring exchange interaction completely. In or- der to improve on this, Cellular DMFT simulations are conducted for small clusters of size Nc = 2 and 3. The results paint a different physical picture. The ring exchange, by favor- ing a ferromagnetic alignment of spins, competes with the Kondo screening. As a result, strong short-range ferromagnetic fluctuations appear at larger values of µ. By lowering the temperature, these fluctuations are enhanced at first. However, for T < Tcoh they are increas- ingly suppressed, which is consistent with Fermi liquid coherence. However, beyond a certain threshold value of µ, fluctuations persist to the lowest temperatures. At the same time, while not apparent in the DMFT results, the total occupation n increases quite strongly in a very narrow range around the same value of µ. The evolution of n with µ is always continuous, but hints at a discontinuity in the limit Nc → ∞. This first-order transition breaks the Kondo effect. Beyond the transition, a ferromagnetic state in the first layer is established, and the second layer becomes a decoupled overlayer. These observations provide a quite appealing interpretation of the experimental results. As a function of chemical potential, the Kondo breakdown quantum critical point is preempted by a first-order transition, where the layers decouple and the first layer turns into a ferromagnet. In the experimental situation, where the filling can be tuned directly, the discontinuous transition is mirrored by a phase separation, which interpolates between the Fermi liquid ground state at lower filling and the magnetic state at higher filling. This is precisely the range of the intervening phase found in the experiments, which is characterized by an onset of a finite sample magnetization. Besides the interplay of heavy fermion physics and magnetic exchange, recently the spin- orbit coupling, which is present in many heavy fermion materials, attracted a lot of interest. In the presence of time-reversal symmetry, due to spin-orbit coupling, there is the possibility of a topological ground state. It was recently conjectured that the energy scale of spin-orbit coupling can become dom- inant in heavy fermion materials, since the coherence scale and quasiparticle bandwidth are rather small. This can lead to a heavy fermion ground state with a nontrivial band topology; that is, a topological Kondo insulator (TKI). While being subject to strong correlation effects, this state must be adiabatically connected to a non-interacting, topological state. The idea of the topological ground state realized in prototypical Kondo insulators, in par- ticular SmB6, promises to shed light on some of the peculiarities of these materials, like a residual conductivity at the lowest temperatures, which have remained unresolved so far. In this work, a simple two-band model for two-dimensional topological Kondo insulators is devised, which is based on a single Kramer's doublet coupled to a single conduction band. The model is investigated in the presence of a Hubbard interaction as a function of interaction strength U and inverse temperature β. The bulk properties of the model are obtained by DMFT, with a hybridization expansion CTQMC impurity solver. The DMFT approximation of a local self-energy leads to a very simple way of computing the topological invariant. The results show that with increasing U the system can be driven through a topological phase transition. Interestingly, the transition is between distinct topological insulating states, namely the Γ-phase and M-phase. This appearance of different topological phases is possible due to the symmetry of the underlying square lattice. By adiabatically connecting both in- teracting states with the respective non-interacting state, it is shown that the transition indeed drives the system from the Γ-phase to the M-phase. A different behavior can be observed by pushing the bare position of the Kramer's doublet to higher binding energies. In this case, the non-interacting starting point has a trivial band topology. By switching on the interaction, the system can be tuned through a quantum phase transition, with a closing of the band gap. Upon reopening of the band gap, the system is in the Γ-phase, i. e. a topological insulator. By increasing the interaction strength further, the system moves into a strongly correlated regime. In fact, close to the expected transition to the M phase, the mass renormalization becomes quite substantial. While absent in the para- magnetic DMFT simulations conducted, it is conceivable that instead of a topological phase transition, the system undergoes a time-reversal symmetry breaking, magnetic transition. The regime of strong correlations is studied in more detail as a function of temperature, both in the bulk and with open boundary conditions. A quantity which proved very useful is the bulk topological invariant Ns, which can be generalized to finite interaction strength and temperature. In particular, it can be used to define a temperature scale T ∗ for the onset of the topological state. Rescaling the results for Ns, a nice data collapse of the results for different values of U, from the local moment regime to strongly mixed valence, is obtained. This hints at T ∗ being a universal low energy scale in topological Kondo insulators. Indeed, by comparing T ∗ with the coherence scale extracted from the self-energy mass renormalization, it is found that both scales are equivalent up to a constant prefactor. Hence, the scale T ∗ obtained from the temperature dependence of topological properties, can be used as an independent measure for Fermi liquid coherence. This is particularly useful in the experimentally relevant mixed valence regime, where charge fluctuations cannot be neglected. Here, a separation of the energy scales related to spin and charge fluctuations is not possible. The importance of charge fluctuations becomes evident in the extent of spectral weight transfer as the temperature is lowered. For mixed valence, while the hybridization gap emerges, a substantial amount of spectral weight is shifted from the vicinity of the Fermi level to the lower Hubbard band. In contrast, this effect is strongly suppressed in the local moment regime. In addition to the bulk properties, the spectral function for open boundaries is studied as a function of temperature, both in the local moment and mixed valence regime. This allows an investigation of the emergence of topological edge states with temperature. The method used here is the site-dependent DMFT, which is a generalization of the conventional DMFT to inhomogeneous systems. The hybridization expansion CTQMC algorithm is used as impurity solver. By comparison with the bulk results for the topological quantity Ns, it is found that the temperature scale for the appearance of the topological edge states is T ∗, both in the mixed valence and local moment regime.}, subject = {Fermionensystem}, language = {en} } @phdthesis{Werner2014, author = {Werner, Christian}, title = {Effect of autoantibodies targeting amphiphysin or glutamate decarboxylase 65 on synaptic transmission of GABAergic neurons}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-105648}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {The number of newly detected autoantibodies (AB) targeting synaptic proteins in neurological disorders of the central nervous system (CNS) is steadily increasing. Direct interactions of AB with their target antigens have been shown in first studies but the exact pathomecha-nisms for most of the already discovered AB are still unclear. The present study investigates pathophysiological mechanisms of AB-fractions that are associated with the enigmatic CNS disease Stiff person syndrome (SPS) and target the synaptically located proteins amphiphysin or glutamate decarboxylase 65 (GAD65). In the first part of the project, effects of AB to the presynaptic endocytic protein amphiphysin were investigated. Ultrastructural investigations of spinal cord presynaptic boutons in an es-tablished in-vivo passive-transfer model after intrathecal application of human anti-amphiphysin AB showed a defect of endocytosis. This defect was apparent at high synaptic activity and was characterized by reduction of the synaptic vesicle pool, clathrin coated vesi-cles (CCVs), and endosome like structures (ELS) in comparison to controls. Molecular inves-tigation of presynaptic boutons in cultured murine hippocampal neurons with dSTORM microscopy after pretreatment with AB to amphiphysin revealed that marker proteins involved in vesicle exocytosis (synaptobrevin 2 and synaptobrevin 7) had an altered expression in GA-BAergic presynapses. Endophilin, a direct binding partner of amphiphysin also displayed a disturbed expression pattern. Together, these results point towards an anti-amphiphysin AB-induced defective organization in GABAergic synapses and a presumably compensatory rearrangement of proteins responsible for CME. In the second part, functional consequences of SPS patient derived IgG fractions containing AB to GAD65, the rate limiting enzyme for GABA synthesis, were investigated by patch clamp electrophysiology and immunohistology. GABAergic neurotransmission at low and high activity as well as short term plasticity appeared normal but miniature synaptic potentials showed an enhanced frequency with constant amplitudes. SPS patient IgG after preabsorption of GAD65-AB using recombinant GAD65 still showed specific synaptic binding to neu-rons and brain slices supporting the hypothesis that additional, not yet characterized AB are present in patient IgG responsible for the exclusive effect on frequency of miniature potentials. In conclusion, the present thesis uncovered basal pathophysiological mechanisms underlying paraneoplastic SPS induced by AB to amphiphysin leading to disturbed presynaptic architec-ture. In idiopathic SPS, the hypothesis of a direct pathophysiological role of AB to GAD65 was not supported and additional IgG AB are suspected to induce distinct synaptic malfunction.}, subject = {Autoaggressionskrankheit}, language = {en} } @phdthesis{Wenzel2014, author = {Wenzel, Jens}, title = {Regulation of TLR-induced macrophage responses by cytoskeleton-associated phosphoproteins}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-98843}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Toll-like receptors (TLR) are pattern recognition receptors (PRR) by which macrophages (M{\O}) sense pathogen-associated molecular patterns (PAMPs). The recognition of lipopolysaccharide (LPS), the PAMP of gram negative bacteria, by TLR4 triggers signaling cascades and leads to the pro-inflammatory activation of the cells. A recent quantitative and kinetic analysis of the phosphoproteome of LPS-activated primary macrophages highlighted the cytoskeleton as a cell compartment with an enriched protein phosphorylation. In total 44 cytoskeleton-associated proteins were regulated by this post-translational modification and thus might be involved in the control and regulation of key macrophage functions like spreading, motility and phagocytosis. To investigate the control of cytoskeleton-associated cell functions by TLR4 activation, we first developed a method to quantitatively measure the spreading response of bone marrow M{\O} after stimulation with LPS. Fluorescence microscopy was used for cell imaging and visualisation of the M{\O} contact area. In collaboration with the Fraunhofer Institute Erlangen, we developed and validated a software tool for the semi-automated segmentation and quantitation of M{\O} fluorescence microscopy data, which allowed fast, robust and objective image analysis. Using this method, we observed that LPS caused time-dependent spreading, which was detectable after 1-2 h and maximal after 24 h. Next, the impact of genetic or pharmacological inhibition of known TLR signaling components was investigated. Deficiency in the adapter protein MYD88 strongly reduced spreading activity at the late time points, but had no impact early after LPS-stimulation. A similar effect was observed upon pharmacological inhibition of ERK1/2 signaling, indicating that ERK1/2 mediates MYD88-dependent M{\O} spreading. In contrast, M{\O} lacking the MAPK p38 were impaired in the initial spreading response but responded normally 8-24 h after stimulation. The genetic deletion of the MAPK phosphatases DUSP1 and DUSP16 resulted in impaired late spreading, corroborating the essential role for functional MAPK signaling in TLR4-driven M{\O} spreading. To identify the contribution of other cytoskeletal phosphoproteins to M{\O} spreading, siRNA knockdown of selected candidate genes in primary murine M{\O} was employed and combined with automated quantitative image analysis. These experiments revealed a functional role for the Myosins MYO1e and MYO1f in M{\O} spreading. These motor proteins are strongly phosphorylated in LPS-activated M{\O}. Because of their ability to simultaneously bind to actin filaments and cell membrane or other proteins, we investigated their role in phagocytosis, cytokine production and antigen presentation. Phagocytosis and killing of bacteria were not affected in Myo1e-/- macrophages. However, MYO1e plays a role in chemokine secretion and antigen presentation processes. MCP1 (CCL2) release was selectively increased in Myo1e-deficient M{\O} and dendritic cells (DC), while cytokine secretion was unaffected. Furthermore, macrophages and DCs lacking MYO1e showed lower levels of MHC-II on the cell surface. However, mRNA levels of CCL2 and of MHC-II were unaltered. These data suggest a role for MYO1e in the transport of selected chemokines and of MHC-II molecules to the cell surface. MHC-II-restricted antigen presentation assays revealed an impaired capacity of macrophages and DC lacking MYO1e to stimulate antigen-specific T cells, suggesting that the reduced MHC-II expression is functionally relevant. Taken together, in this study first a quantitative image analysis method was developed which allows the unbiased, robust and efficient investigation of the macrophage spreading response. Combination of this method with siRNA knockdown of selected cytoskeleton-associated phosphoproteins led to the identification of MYO1e and MYO1f as regulators of macrophage spreading. Furthermore, we identified MYO1e in M{\O} and DC to be essential for the intracellular transport of CCL2 and MHC-II to the cell surface and for optimal stimulation of antigen-specific CD4 T cells.}, subject = {Toll-like-Rezeptoren}, language = {en} } @article{WendlerBurmesterSoerensenetal.2014, author = {Wendler, J{\"o}rg and Burmester, Gerd R. and S{\"o}rensen, Helmut and Krause, Andreas and Richter, Constanze and Tony, Hans-Peter and Rubbert-Roth, Andrea and Bartz-Bazzanella, Peter and Wassenberg, Siegfried and Haug-Rost, Iris and D{\"o}rner, Thomas}, title = {Rituximab in patients with rheumatoid arthritis in routine practice (GERINIS): six-year results from a prospective, multicentre, non-interventional study in 2,484 patients}, series = {Arthritis Research \& Therapy}, volume = {16}, journal = {Arthritis Research \& Therapy}, number = {2}, doi = {10.1186/ar4521}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121184}, pages = {R80}, year = {2014}, abstract = {INTRODUCTION: The aim of this study was to evaluate the safety and efficacy of rituximab (RTX) in a large cohort of patients with rheumatoid arthritis in routine care, and to monitor changes in daily practice since the introduction of RTX therapy. METHODS: This was a multicentre, prospective, non-interventional study conducted under routine practice conditions in Germany. Efficacy was evaluated using Disease Activity Score in 28 joints (DAS28) and Health Assessment Questionnaire-Disability Index (HAQ-DI). Safety was assessed by recording adverse drug reactions (ADRs). Physician and patient global efficacy and tolerability assessments were also evaluated. RESULTS: Overall, 2,484 patients (76.7\% female, mean age 56.4 years, mean disease duration 11.7 years) received RTX treatment (22.7\% monotherapy). The total observation period was approximately six-years (median follow-up 14.7 months). RTX treatment led to improvements in DAS28 and HAQ-DI that were sustained over multiple courses. DAS28 improvements positively correlated with higher rheumatoid factor levels up to 50 IU/ml. Response and tolerability were rated good/very good by the majority of physicians and patients. Mean treatment intervals were 10.5 and 6.8 months for the first and last 400 enrolled patients, respectively. Infections were the most frequently reported ADRs (9.1\%; 11.39/100 patient-years); approximately 1\% of patients per course discontinued therapy due to ADRs. CONCLUSIONS: Prolonged RTX treatment in routine care is associated with good efficacy and tolerability, as measured by conventional parameters and by physicians' and patients' global assessments. Rheumatoid factor status served as a distinct and quantitative biomarker of RTX responsiveness. With growing experience, physicians repeated treatments earlier in patients with less severe disease activity.}, language = {en} } @phdthesis{Wende2014, author = {Wende, Beate}, title = {Diversity of saproxylic beetles and host tree specialisation in differently managed forests across Germany}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-107049}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Chapter I The gradual turnover of dead organic material into mineral nutrients is a key ecological function, linking decomposition and primary production, the essential parts of the nutrient-energy cycle. However, disturbances in terms of species or resource losses might impair the equilibrium between production and decomposition. Humanity has converted large proportions of natural landscapes and intensified land-use activity for food production. Globally, only very few areas are totally unaffected by human activity today. To ensure the maintenance of both essential ecosystem services, knowledge about the interplay of biodiversity and ecosystem functioning as well as effects of intensified management on both is crucial. The vast majority of terrestrial biomass production as well as decomposition take place in forest ecosystems. Though forestry has a long sustainable history in Europe, its intensification during the last century has caused severe impacts on forest features and, consequently, on the associated biota, especially deadwood dependent organisms. Among these, saproxylic beetles are the most diverse group in terms of species numbers and functional diversity, but also most endangered due to habitat loss. These features classify them as ideal research organisms to study effects of intensified forestry on ecosystem services. The BELONGDEAD project located in Germany aimed to investigate deadwood decay and functional consequences of diversity changes in the associated fauna on the decomposition process from the initialisation of deadwood decay to complete degradation. As part of the BeLongDead project, this dissertation focussed on saproxylic beetle species, thereby evaluating (1) regionally effects of tree species identity of fresh deadwood and (2) forest management of varying intensities on the diversity, abundance and community composition of saproxylic beetles (chapter II); (3) the specialisation degree of different trophic guilds of saproxylic beetles, and thus the stability and robustness of their interaction networks against disturbances (chapter III); (4) the impact of environmental features of local to regional spatial scales on species richness of saproxylic beetles differing in their habitat niche in terms of deadwood decay stages (chapter IV). Chapter II The vast majority of European forest ecosystems have been anthropogenically affected, leaving less than 1\% of the about 1 milliard hectare as natural forests. A long history of forestry and especially the technological progress during the last century have caused massive habitat fragmentation as well as substantial loss of essential resources in European forest ecosystems. Due to this, the substrate-dependent group of saproxylic beetles has experienced severe species losses. Thus, investigations concerning saproxylic diversity and deadwood volume were badly needed. However, the importance of different deadwood in terms of tree species identity for the colonization by saproxylic beetles under different local and regional management regimes is poorly understood. Therefore, we studied possible regional differences in colonization patterns of saproxylic beetle species in a total of 688 fresh deadwood logs of 13 tree species in 9 sites of managed conifer and beech forests, and unmanaged beech forests, respectively. We found that tree species identity was an important driver in determining saproxylic species composition and abundance within fresh deadwood. However, saproxylic species showed different colonization patterns of deadwood items of the same tree species among the study regions. Regionally consistent, conifer forests were most diverse. We attribute the latter result to the historically adaption of saproxylic beetle species to semi-open forests, which conditions are actually best reflected by conifer forests. To preserve a diverse local species pool of early successional saproxylic beetles, we suggest an equal high degree of deadwood diversity in a tree species context in due consideration of regional differences. Chapter III The extinction risk of a particular species corresponds with its species-specific requirements on resources and habitat conditions, in other words with the width of the species` ecological niche. Species with a narrow ecological niche are defined as specialists. Members of this group experience higher extinction risk by resource limitation than generalists, which are able to utilize a variety of resources. For the classification of species as specialists or generalists, thus evaluating possible extinction risks, ecologists use the concept of interaction networks. This method has often been applied for mutualistic or antagonistic plant-animal interactions, but information for networks of detritivores is scarce. Therefore, saproxylic beetle species sampled as described in chapter II were categorised according to their larval diet; additionally their interaction networks (N=108) with 13 dead host tree species were analysed. Specialisation degree was highest for wood-digesting beetles and decreased with increasing trophic level. Also the network indices evaluating robustness and generality indicated a higher susceptibility to species extinctions for xylophagous than for mycetophagous and predatory beetles. The specialisation of xylophagous species on specific tree species might be an adaption to tree species specific ingredients stored for defence against pathogens and pests. However, we conclude that the high specialisation degree of xylophages and thus their higher extinction risk by resource loss harbours certain dangers for ecosystem function and stability as species diversity is positively linked to both. Chapter IV Populations depend on individual emigration and immigration events to ensure genetic exchange. For successful migration it is of utmost importance that spatially separated populations are obtainable by specimen. Migratory success depends on the one hand on the species dispersal abilities and on the other on the availability of suitable habitats in the surrounding landscape in which the distinct host populations exist. However, consequences of intensive forest management correspond not only to severe reduction of local deadwood amount, but, among others, also a change in tree species composition and high levels of fragmentation in the surrounding forest area. Saproxylic beetle species differ in their dispersal behaviour according to the temporal availability of their preferred habitat. Generally, early successional saproxylic beetles are able to disperse over large distances, whereas beetles inhabiting advanced decayed wood often remain close to their larval habitat. Due to this, environmental factors might affect saproxylic beetle guilds differently. We classified the saproxylic beetles sampled as described in chapter II according to their calculated habitat niche as early, intermediate or late successional saproxylic beetles. For the different guilds the effects of 14 environmental factors on different spatial scales (stand factors at 0.1 km radius, landscape composition at 2 km radius, and regionally differing abiotic factors in 400 km to 700 km distance) were investigated. Consistently for all guilds, species richness decreased with fragmentation at local and landscape scale, and increased in warmer climate. However, we found contradictory results between the guilds to some extent. We relate this to guild specific habitat requirements of the saproxylic beetles. Therefore, for the development of appropriate conservation practices guild-specific requirements saproxylic beetles have to be considered not only locally but on larger spatial scales. Chapter V In conclusion, this dissertation identified main drivers of early successional saproxylic beetle species richness on various spatial scales. Our results emphasize the importance to develop management schemes meeting species-specific and guild-specific habitat requirements of the saproxylic beetle fauna at relevant spatial and temporal scales. Therefore, short-term actions suggested for sustainable forest management should be the focus on a diverse tree species composition consisting of indigenous tree species with respect to regional differences. Moreover, senescent trees, fallen and standing deadwood should remain in the forests, and some tree individuals should be allowed to grow old. Long-term actions should involve the reduction of forest fragmentation and the connection of spatial widely separated forest fragments. Furthermore, to fully understand the effects of forest management long-term research should be conducted to compare habitat requirements of intermediate and late successional beetles with the results presented in this dissertation.}, subject = {Saproxylophage}, language = {en} } @article{WeissRauGeier2014, author = {Weiss, Johannes and Rau, Monika and Geier, Andreas}, title = {Non-Alcoholic Fatty Liver Disease Epidemiology, Clinical Course, Investigation, and Treatment}, series = {Deautsches {\"A}rzteblatt International}, volume = {111}, journal = {Deautsches {\"A}rzteblatt International}, number = {26}, doi = {10.3238/arztebl.2014.0447}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119557}, pages = {447-52}, year = {2014}, abstract = {Background: The global obesity epidemic has increased the prevalence of fatty liver disease. At present, 14\% to 27\% of the general population in the industrialized world has non-alcoholic fatty liver disease (NAFLD). Methods: We review pertinent publications retrieved by a selective search of the PubMed database for the years 1995 to 2013. Results: The term "non-alcoholic fatty liver disease" covers cases of a wide spectrum of severity, ranging from bland fatty liver without any inflammation and with little or no tendency to progress all the way to non-alcoholic steatohepatitis (NASH) with inflammatory reactions and hepatocyte damage, with or without fibrosis. Some 5\% to 20\% of patients with NAFLD develop NASH, which undergoes a further transition to higher-grade fibrosis in 10\% to 20\% of cases. In fewer than 5\% of cases, fibrosis progresses to cirrhosis. These approximate figures lead to an estimate of 0.05\% to 0.3\% for the prevalence of cirrhosis in the general population. About 2\% of all cirrhosis patients per year develop hepatocellular carcinoma. The diagnosis of fatty liver disease can be suspected initially on the basis of abnormally high aspartate aminotransferase (ASAT) and/or alanine aminotransferase (ALAT) levels and abnormal ultrasonographic findings. The positive predictive value of an ultrasonographic study for mild steatosis is 67\% at most. The NAFLD fibrosis score, which is computed on the basis of multiple parameters (age, body-mass index, diabetes status, ASAT, ALAT, platelet count, and albumin level), has a positive predictive value of 82\% to 90\% and a negative predictive value of 88\% to 93\%. Liver biopsy is the gold standard for diagnosis but should be performed sparingly in view of its rare but sometimes life-threatening complications, such as hemorrhage. The treatment of NAFLD and NASH consists mainly of changes in lifestyle and nutrition. Conclusion: NAFLD can, in principle, be reversed. This is only possible with weight reduction by at least 3\% to 5\%.}, language = {en} } @article{WeissHaasLessneretal.2014, author = {Weiss, B. and Haas, S. and Lessner, G. and Mikkat, S. and Kreutzer, M. and Glocker, M. O. and Wree, A. and Schmitt, O.}, title = {The Proteome of the Differentiating Mesencephalic Progenitor Cell Line CSM14.1 In Vitro}, series = {BioMed Research International}, journal = {BioMed Research International}, number = {351821}, issn = {2314-6141}, doi = {10.1155/2014/351821}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117992}, year = {2014}, abstract = {The treatment of Parkinson's disease by transplantation of dopaminergic (DA) neurons from human embryonic mesencephalic tissue is a promising approach. However, the origin of these cells causes major problems: availability and standardization of the graft. Therefore, the generation of unlimited numbers of DA neurons from various types of stem or progenitor cells has been brought into focus. A source for DA neurons might be conditionally immortalized progenitor cells. The temperature-sensitive immortalized cell line CSM14.1 derived from the mesencephalon of an embryonic rat has been used successfully for transplantation experiments. This cell line was analyzed by unbiased stereology of cell type specific marker proteins and 2D-gel electrophoresis followed by mass spectrometry to characterize the differentially expressed proteome. Undifferentiated CSM14.1 cells only expressed the stem cell marker nestin, whereas differentiated cells expressed GFAP or NeuN and tyrosine hydroxylase. An increase of the latter cells during differentiation could be shown. By using proteomics an explanation on the protein level was found for the observed changes in cell morphology during differentiation, when CSM14.1 cells possessed the morphology of multipolar neurons. The results obtained in this study confirm the suitability of CSM14.1 cells as an in vitro model for the study of neuronal and dopaminergic differentiation in rats.}, language = {en} } @phdthesis{Weirather2014, author = {Weirather, Johannes}, title = {Role of CD4+ T lymphocytes in cardiac wound healing and remodeling after experimental myocardial infarction in mice}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-107225}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Cardiac healing after myocardial infarction (MI) represents the cardinal prerequisite for proper replacement of the irreversibly injured myocardium. In contrast to innate immunity, the functional role of adaptive immunity in postinfarction healing has not been systematically addressed. The present study focused on the influence of CD4+ T lymphocytes on wound healing and cardiac remodeling after experimental myocardial infarction in mice. Both conventional and Foxp3+ regulatory CD4+ T cells (Treg cells) became activated in heart draining lymph nodes after MI and accumulated in the infarcted myocardium. T cell activation was strictly antigen-dependant as T cell receptor-transgenic OT-II mice in which CD4+ T cells exhibit a highly limited T cell receptor repertoire did not expand in heart-draining lymph nodes post-MI. Both OT-II and major histocompatibility complex class II-deficient mice lacking a CD4+ T cell compartment showed a fatal clinical postinfarction outcome characterized by disturbed scar tissue construction that resulted in impaired survival due to a prevalence of left-ventricular ruptures. To assess the contribution of anti-inflammatory Treg cells on wound healing after MI, the Treg cell compartment was depleted using DEREG mice that specifically express the human diphtheria toxin receptor in Foxp3-positive cells, resulting in Treg cell ablation after diphtheria toxin administration. In a parallel line of experiments, a second model of anti-CD25 antibody-mediated Treg cell immuno-depletion was used. Treg cell ablation prior to MI resulted in adverse postinfarction left-ventricular dilatation associated with cardiac deterioration. Mechanistically, Treg cell depletion resulted in an increased recruitment of pro-inflammatory neutrophils and Ly-6Chigh monocytes into the healing myocardium. Furthermore, Treg cell-ablated mice exhibited an adverse activation of conventional non-regulatory CD4+ and CD8+ T cells that showed a reinforced infiltration into the infarct zone. Increased synthesis of TNFα and IFNγ by conventional CD4+ and CD8+ T cells in hearts of Treg cell-depleted mice provoked an M1-like macrophage polarization characterized by heightened expression of healing-compromising induced NO synthase, in line with a reduced synthesis of healing-promoting transglutaminase factor XIII (FXIII), osteopontin (OPN) and transforming growth factor beta 1 (TGFβ1). Therapeutic Treg cell activation by a superagonistic anti-CD28 monoclonal antibody stimulated Treg cell accumulation in the infarct zone and led to an increased expression of mediators inducing an M2-like macrophage polarization state, i.e. interleukin-10, interleukin-13 and TGFβ1. M2-like macrophage differentiation in the healing infarct was associated with heightened expression of scar-forming procollagens as well as scar-stabilizing FXIII and OPN, resulting in improved survival due to a reduced incidence of left-ventricular ruptures. Therapeutic Treg cell activation and the induction of a beneficial M2-like macrophage polarization was further achieved by employing a treatment modality of high clinical potential, i.e. by therapeutic administration of IL-2/ anti-IL-2 monoclonal antibody complexes. The findings of the present study suggest that therapeutic Treg cell activation and the resulting improvement of healing may represent a suitable strategy to attenuate adverse infarct expansion, left-ventricular remodeling, or infarct ruptures in patients with MI.}, subject = {Antigen CD4}, language = {en} } @phdthesis{Weber2014, author = {Weber, David}, title = {Hey target gene regulation in embryonic stem cells and cardiomyocytes}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-101663}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {The Notch signaling pathway is crucial for mammalian heart development. It controls cell-fate decisions, coordinates patterning processes and regulates proliferation and differentiation. Critical Notch effectors are Hey bHLH transcription factors (TF) that are expressed in atrial (Hey1) and ventricular (Hey2) cardiomyocytes (CM) and in the developing endocardium (Hey1/2/L). The importance of Hey proteins for cardiac development is demonstrated by knockout (KO) mice, which suffer from lethal cardiac defects, such as ventricular septum defects (VSD), valve defects and cardiomyopathy. Despite this clear functional relevance, little is known about Hey downstream targets in the heart and the molecular mechanism by which they are regulated. Here, I use a cell culture system with inducible Hey1, Hey2 or HeyL expression to study Hey target gene regulation in HEK293 cells, in murine embryonic stem cells (ESC) and in ESC derived CM. In HEK293 cells, I could show that genome wide binding sites largely overlap between all three Hey proteins, but HeyL has many additional binding sites that are not bound by Hey1 or Hey2. Shared binding sites are located close to transcription start sites (TSS) where Hey proteins preferentially bind to canonical E boxes, although more loosely defined modes of binding exist. Additional sites only bound by HeyL are more scattered across the genome. The ability of HeyL to bind these sites depends on the C-terminal part of the protein. Although there are genes which are differently regulated by HeyL, it is unclear whether this regulation results from binding of additional sites by HeyL. Additionally, Hey target gene regulation was studied in ESC and differentiated CM, which are more relevant for the observed cardiac phenotypes. ESC derived CM contract in culture and are positive for typical cardiac markers by qRT PCR and staining. According to these markers differentiation is unaffected by prolonged Hey1 or Hey2 overexpression. Regulated genes are largely redundant between Hey1 and Hey2. These are mainly other TF involved in e.g. developmental processes, apoptosis, cell migration and cell cycle. Many target genes are cell type specifically regulated causing a shift in Hey repression of genes involved in cell migration in ESC to repression of genes involved in cell cycle in CM. The number of Hey binding sites is reduced in CM and HEK293 cells compared to ESC, most likely due to more regions of dense chromatin in differentiated cells. Binding sites are enriched at the proximal promoters of down-regulated genes, compared to up-or non-regulated genes. This indicates that up-regulation primarily results from indirect effects, while down-regulation is the direct results of Hey binding to target promoters. The extent of repression generally correlates with the amount of Hey binding and subsequent recruitment of histone deacetylases (Hdac) to target promoters resulting in histone H3 deacetylation. However, in CM the repressive effect of Hey binding on a subset of genes can be annulled, likely due to binding of cardiac specific activators like Srf, Nkx2-5 and Gata4. These factors seem not to interfere with Hey binding in CM, but they recruit histone acetylases such as p300 that may counteract Hey mediated histone H3 deacetylation. Such a scenario explains differential regulation of Hey target genes between ESC and CM resulting in gene and cell-type specific regulation.}, subject = {Transkriptionsfaktor}, language = {en} } @phdthesis{Waning2014, author = {Waning, Yvonne}, title = {EEG Untersuchung zum Zusammenhang zwischen genetischen Variationen im COMT Polymorphismus und neuronalen Korrelaten der Emotionsverarbeitung und Aufmerksamkeitsprozessen}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-109828}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Das Enzym Catechol-O- Methyltransferase (COMT) spielt eine wichtige Rolle beim Abbau der Neurotransmitter Dopamin, Noradrenalin und Adrenalin. In dessen Gen befindet sich ein Polymorphismus (SNP), der einen Aminos{\"a}ureaustausch von Valin zu Methionin an Position 158 der membrangebundenden Isoform bewirkt.. In fr{\"u}heren Studien zeigen die verschiedenen Genotypen des Polymorphismus Unterschiede in der emotionalen Verarbeitung, bei der die COMT Einfluss auf die Verarbeitung von negativen, aber nicht von positiven Stimuli zeigt. Neben emotionalen werden durch die COMT aber auch kognitive pr{\"a}frontale Prozesse beeinflusst. Eine Aufmerksamkeitslenkung auf Bilder f{\"u}hrt im Zeitfenster der EPN und LPP zu {\"a}hnlichen Effekten wie beim Betrachten emotionaler Bilder In dieser Studie sollte daher untersucht werden, ob die COMT- Effekte auf die Emotionsverarbeitung durch Aufmerksamkeitsprozesse begr{\"u}ndet sind und diese unabh{\"a}ngig vom emotionalen Inhalt durch die Aufmerksamkeitsinstruktion ausl{\"o}sbar sind. Daf{\"u}r wurden bei 48 gesunden und entweder Val/Val oder Met/Met- Homozygoten Probanden w{\"a}hrend der Pr{\"a}sentation von IAPS Bildern mit positiven, negativen und neutralen Bildern ein EEG abgeleitet. Und es wurde die neuronale Aktivierung bei emotionalen Stimuli, in Interaktion mit der Instruktion, die Aufmerksamkeit auf eine bestimmte emotionale Kategorie zu richten, untersucht. Dabei zeigten sich die erwarteten Emotions- und Aufmerksamkeitseffekte auf EPN und LPP. Keinen Einfluss hatte der COMT-Genotyp. Dies k{\"o}nnte an der Interferenz der Emotionseffekte mit kognitiven Effekten des COMT- Polymorphismus liegen.}, subject = {Elektroencephalographie}, language = {de} } @phdthesis{Wang2014, author = {Wang, Ying}, title = {Immune and peripheral endogenous opioid mechanisms of electroacupuncture analgesia}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-98326}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {A precious treasure in traditional Chinese medicine (TCM), acupuncture played a vital and irreplaceable role in contributing to people's health in the thousands of years of Chinese history, and in 2010 was officially added to the "Representative List of the Intangible Cultural Heritage of Humanity" by the United Nations. Because of the side-effects of long-term drug therapy for pain, and the risks of dependency, acupuncture has been widely accepted as one of the most important alternative choice therapies for treating varieties of acute and chronic pain-related disorders. The clinical application and scientific mechanism research of acupuncture have therefore increased intensively in the last few decades. Besides hand acupuncture, other treatment approaches e.g. electroacupuncture (EA) have been widely accepted and applied as an important acupuncture-related technique for acupuncture analgesia (AA) research. The involvement of opioid peptides and receptors in acute AA has been shown via pre-EA application of opioid receptor/peptide antagonists. However, existing publications still cannot illuminate the answer to the following question: how does sustained antinociception happen by EA treatment? The hypothesis of opioid peptide-mediated tonic AA might be able to answer the question. In the first part of this thesis, the institution of a reproducible acupuncture treatment model as well as the endogenous opioid-related mechanisms was demonstrated. An anatomically-based three-dimensional (3D) rat model was established to exhibit a digital true-to-life organism, accurate acupoint position and EA treatment protocol on bilateral acupoint GB-30 Huantiao. The optimal EA treatment protocol (100 Hz, 2-3 mA, 0.1 ms, 20 min) at 0 and 24 h after induction of inflammatory pain by complete Freund's adjuvant (CFA) on conscious free-moving rats was then established. EA elicited significant sustained mechanical and thermal antinociception up to 144 h. Post-EA application of opioid receptors (mu opioid receptor, MOR; delta opioid receptor, DOR) antagonists naloxone (NLX) and naltrindole (NTI), or opioid peptide antibodies anti-beta-endorphin (anti-END), met-enkephalin (anti-ENK) or -dynorphin A (anti-DYN) could also block this effect at a late phase (96 h) of CFA post-EA, which suggested opioid-dependent tonic analgesia was produced by EA. Meanwhile, EA also reduced paw temperature and volume at 72-144 h post CFA indicating anti-inflammatory effects. Nociceptive thresholds were assessed by paw pressure threshold (Randall-Sellito) or paw withdrawal latency (Hargreaves) and an anti-inflammatory effect was evaluated by measurement of plantar temperature and volume of inflamed paw. The second part of the thesis further suggests the correlation between the chemokine CXCL10 (= interferon-gamma inducible protein 10, IP-10) and opioid peptides in EA-induced antinociception. Based on a comprehensive Cytokine Array of 29 cytokines, targeted cytokines interleukin (IL)-1alpha, interleukin (IL)-1beta, tumor necrosis factor (TNF)-alpha, interleukin (IL)-4, interleukin (IL)-13, interferon (IFN)-gamma as well as CXCL10 were selected and quantified by enzyme-linked immunosorbent assay (ELISA), and real time reverse transcription-polymerase chain reaction (RT-PCR) quantification confirmed upregulation of CXCL10 mRNA at both 72 and 96 h. The following hyperalgesic assessment suggested the antinociceptive effect of CXCL10. The double immunostaining localizing opioid peptides with macrophages expressed the evident upregulation of CXCR3-receptor of CXCL10 in EA treated samples as well as the significant upregulation or downregulation of opioid peptides by repeated treatment of CXCL10 or antibody of CXCL10 via behavioral tests and immune staining. Subsequent immunoblotting measurements showed non-alteration of opioid receptor level by EA, indicating that the opioid receptors did not apparently contribute to AA in the present studies. In vitro, CXCL10 did not directly trigger opioid peptide END release from freshly isolated rat macrophages. This might implicate an indirect property of CXCL10 in vitro stimulating the opioid peptide-containing macrophages by requiring additional mediators in inflammatory tissue. In summary, this project intended to explore the peripheral opioid-dependent analgesic mechanisms of acupuncture with a novel 3D treatment rat model and put forward new information to support the pivot role of chemokine CXCL10 in mediating EA-induced tonic antinociception via peripheral opioid peptides.}, subject = {Elektroakupunktur}, language = {en} } @article{WangLiKateleetal.2014, author = {Wang, Hui and Li, Min-Yi and Katele, F{\´e}lix Zongwe and Satyanandamurty, Tirumani and Wu, Jun and Bringmann, Gerhard}, title = {Decandrinin, an unprecedented \(C_9\)-spiro-fused 7,8-\( seco-ent\)-abietane from the Godavari mangrove \(Ceriops\ decandra\)}, series = {Beilstein Journal of Organic Chemistry}, volume = {10}, journal = {Beilstein Journal of Organic Chemistry}, issn = {1860-5397}, doi = {10.3762/bjoc.10.23}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119983}, pages = {276-81}, year = {2014}, abstract = {Decandrinin (1), an unprecedented \(C_9\)-spiro-fused 7,8-\(seco-ent\)-abietane, was obtained from the bark of an Indian mangrove, \(Ceriops\ decandra\), collected in the estuary of Godavari, Andhra Pradesh. The constitution and the relative configuration of 1 were determined by HRMS (ESI) and extensive NMR investigations, and the absolute configuration by circular dichroism (CD) and optical-rotatory dispersion (ORD) spectroscopy in combination with quantum-chemical calculations. Decandrinin is the first 7,8-\(seco-ent\)-abietane.}, language = {en} } @phdthesis{Walz2014, author = {Walz, Yvonne}, title = {Remote sensing for disease risk profiling: a spatial analysis of schistosomiasis in West Africa}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-108845}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Global environmental change leads to the emergence of new human health risks. As a consequence, transmission opportunities of environment-related diseases are transformed and human infection with new emerging pathogens increase. The main motivation for this study is the considerable demand for disease surveillance and monitoring in relation to dynamic environmental drivers. Remote sensing (RS) data belong to the key data sources for environmental modelling due to their capabilities to deliver spatially continuous information repeatedly for large areas with an ecologically adequate spatial resolution. A major research gap as identified by this study is the disregard of the spatial mismatch inherent in current modelling approaches of profiling disease risk using remote sensing data. Typically, epidemiological data are aggregated at school or village level. However, these point data do neither represent the spatial distribution of habitats, where disease-related species find their suitable environmental conditions, nor the place, where infection has occurred. As a consequence, the prevalence data and remotely sensed environmental variables, which aim to characterise the habitat of disease-related species, are spatially disjunct. The main objective of this study is to improve RS-based disease risk models by incorporating the ecological and spatial context of disease transmission. Exemplified by the analysis of the human schistosomiasis disease in West Africa, this objective includes the quantification of the impact of scales and ecological regions on model performance. In this study, the conditions that modify the transmission of schistosomiasis are reviewed in detail. A conceptual underpinning of the linkages between geographical RS measures, disease transmission ecology, and epidemiological survey data is developed. During a field-based analysis, environmental suitability for schistosomiasis transmission was assessed on the ground, which is then quantified by a habitat suitability index (HSI) and applied to RS data. This conceptual model of environmental suitability is refined by the development of a hierarchical model approach that statistically links school-based disease prevalence with the ecologically relevant measurements of RS data. The statistical models of schistosomiasis risk are derived from two different algorithms; the Random Forest and the partial least squares regression (PLSR). Scale impact is analysed based on different spatial resolutions of RS data. Furthermore, varying buffer extents are analysed around school-based measurements. Three distinctive sites of Burkina Faso and C{\^o}te d'Ivoire are specifically modelled to represent a gradient of ecozones from dry savannah to tropical rainforest including flat and mountainous regions. The model results reveal the applicability of RS data to spatially delineate and quantitatively evaluate environmental suitability for the transmission of schistosomiasis. In specific, the multi-temporal derivation of water bodies and the assessment of their riparian vegetation coverage based on high-resolution RapidEye and Landsat data proofed relevant. In contrast, elevation data and water surface temperature are constraint in their ability to characterise habitat conditions for disease-related parasites and freshwater snail species. With increasing buffer extent observed around the school location, the performance of statistical models increases, improving the prediction of transmission risk. The most important RS variables identified to model schistosomiasis risk are the measure of distance to water bodies, topographic variables, and land surface temperature (LST). However, each ecological region requires a different set of RS variables to optimise the modelling of schistosomiasis risk. A key result of the hierarchical model approach is its superior performance to explain the spatial risk of schistosomiasis. Overall, this study stresses the key importance of considering the ecological and spatial context for disease risk profiling and demonstrates the potential of RS data. The methodological approach of this study contributes substantially to provide more accurate and relevant geoinformation, which supports an efficient planning and decision-making within the public health sector.}, subject = {Westafrika}, language = {en} } @phdthesis{Walz2014, author = {Walz, Susanne}, title = {DNA-Bindung von Myc und Miz1 und transkriptionelle Regulation ihrer Zielgene}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-106249}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Die Deregulation des Transkriptionsfaktors Myc ist ein charakteristisches Merkmal f{\"u}r eine Vielzahl von humanen Tumoren. Durch die transkriptionelle Aktivierung von Genen, die im Zusammenhang mit Metabolismus, Translation und Proliferation stehen, wird dadurch das Tumorwachstum beg{\"u}nstigt. Myc bildet zudem mit dem Zinkfinger-Protein Miz1 einen Komplex, der hemmend auf die Transkription von Zielgenen wirkt. Bisher sind nur wenige Myc/Miz1-reprimierte Zielgene bekannt. In der vorliegenden Arbeit konnten genomweit die DNA-Bindestellen von Myc und Miz1 durch Chromatin-Immunpr{\"a}zipitationen gefolgt von Hochdurchsatzsequenzierung in einer Zervixkarzinomzelllinie bestimmt werden. Es konnte gezeigt werden, dass Myc an Promotoren aller drei RNA-Polymerasen sowie in enhancer-Regionen bindet, w{\"a}hrend Miz1 Kernpromotoren von RNA-Polymerase II- und III-transkribierten Genen besetzt. reChIP-Experimente zeigten, dass Myc und Miz1 als Komplex an Promotoren von Zielgenen binden. Zudem wurde ein Miz1-DNA-Bindemotiv identifiziert und der transaktivierende Einfluss von Miz1 auf Gene mit diesem Motiv nachgewiesen. Das {\"u}berwiegende Vorhandensein von Myc/Max-Komplexen f{\"u}hrt zu einer Transaktivierung von E-Box-haltigen Promotoren. Andererseits erfolgt die transkriptionelle Repression von Myc/Miz1-Zielgenen an Promotoren, an denen der Myc/Miz1-Komplex vorherrscht. In aktuellen Publikationen konnte gezeigt werden, dass nach mitogener Stimulation von Lymphozyten es zu einer Erh{\"o}hung der Myc-Expression kommt, wodurch Myc als ein genereller Transkriptionsaktivator fungiert, der alle Gene gleichermaßen induziert. Trotz hoher Myc-Mengen in Tumorzellen konnte die generelle Myc-vermittelte Transaktivierung nicht nachgewiesen werden. Zus{\"a}tzlich zur Myc-abh{\"a}ngigen Transaktivierung von E-Box-haltigen Genen, z. B. beteiligt an Translation und RNA-Prozessierung, und der Miz1-vermittelten transkriptionellen Aktivierung von Genen mit Miz1-Motiv (z. B. involviert in Autophagie), konnte entgegen dem Modell der generellen Genamplifikation durch Myc eine Myc/Miz1-abh{\"a}ngige Repression von Zielgenen belegt werden. Die neu gewonnenen Erkenntnisse des Bindeverhaltens des Myc/Miz1-Komplexes und der daraus resultierenden transkriptionellen Regulation von Myc/Miz1-Zielgenen erm{\"o}glichen ein besseres Verst{\"a}ndnis der Myc-Funktion in Tumorzellen und k{\"o}nnte zur Verbesserung von Tumortherapien f{\"u}hren.}, subject = {Myc}, language = {de} } @article{WallmannSperlichFroboeseSchantz2014, author = {Wallmann-Sperlich, Birgit and Froboese, Ingo and Schantz, Peter}, title = {Physical Activity and the Perceived Neighbourhood Environment - Looking at the Association the Other Way Around}, series = {International Journal of Environmental Research and Public Health}, volume = {11}, journal = {International Journal of Environmental Research and Public Health}, number = {8}, issn = {1660-4601}, doi = {10.3390/ijerph110808093}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119441}, pages = {8093-8111}, year = {2014}, abstract = {The association between physical activity (PA) and variables of the perceived environment mainly originate from cross-sectional studies that introduced the idea that the environment influences the PA level of residents. However, the direction of cause and effect has not been solved with finality. The aim of this study was to investigate whether residents' perception of their proximate environment differs depending on their level of PA in transport and recreation. We conducted a cross-sectional survey with residents of six different parts of the city of Cologne, Germany. The sample of 470 adults (52.8\% females; mean age = 35.5 ± 13.8 years) filled in the Global Physical Activity Questionnaire (GPAQ), as well as the European Environmental Questionnaire ALPHA. To distinguish between residents with "low" and "high" PA, we split the samples into two on the basis of the specific median in transport- and recreation-related PA. In the "high" vs. "low" PA group of the overall sample, we noted 4\%-16\% more "PA favourable" environmental perceptions in seven of the 15 environmental variables. Multiple linear regression analyses were performed to investigate associations of socio-demographic correlates and transport- and recreation-related PA on the dependent variables of the environmental perception. In this case, levels of PA were significant predictors for eight of the 15 items concerning environmental perceptions. Thus, the present study introduces the idea that residents with higher levels of transport and recreational PA may perceive their environment in a more "PA-favourable" way than residents with lower levels.}, language = {en} } @article{WallmannSperlichFroboese2014, author = {Wallmann-Sperlich, Birgit and Froboese, Ingo}, title = {Physical Activity during Work, Transport and Leisure in Germany - Prevalence and Socio-Demographic Correlates}, doi = {10.1371/journal.pone.0112333}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-113648}, year = {2014}, abstract = {Background This study aimed 1) to provide data estimates concerning overall moderate- and vigorous-intensity physical activity (MVPA) as well as MVPA during work, transport and leisure in Germany and 2) to investigate MVPA and possible associations with socio-demographic correlates. Methods A cross-sectional telephone survey interviewed 2248 representative participants in the age of 18-65 years (1077 men; 42.4±13.4 years; body mass index: 25.3±4.5kg•m-2) regarding their self-reported physical activity across Germany. The Global Physical Activity Questionnaire was applied to investigate MVPA during work, transport and leisure and questions were answered concerning their demographics. MVPA was stratified by gender, age, body mass index, residential setting, educational and income level. To identify socio-demographic correlates of overall MVPA as well as in the domains, we used a series of linear regressions. Results 52.8\% of the sample achieved physical activity recommendations (53.7\% men/52.1\% women). Overall MVPA was highest in the age group 18-29 years (p<.05), in participants with 10 years of education (p<.05) and in participants with lowest income levels <1.500€ (p<.05). Regression analyses revealed that age, education and income were negatively associated with overall and work MVPA. Residential setting and education was positively correlated with transport MVPA, whereas income level was negatively associated with transport MVPA. Education was the only correlate for leisure MVPA with a positive association. Conclusions The present data underlines the importance of a comprehensive view on physical activity engagement according to the different physical activity domains and discloses a need for future physical activity interventions that consider socio-demographic variables, residential setting as well as the physical activity domain in Germany.}, language = {en} } @article{WallmannSperlichBuckschSchneideretal.2014, author = {Wallmann-Sperlich, Birgit and Bucksch, Jens and Schneider, Sven and Froboese, Ingo}, title = {Socio-demographic, behavioural and cognitive correlates of work-related sitting time in German men and women}, doi = {10.1186/1471-2458-14-1259}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-111017}, year = {2014}, abstract = {Background: Sitting time is ubiquitous for most adults in developed countries and is most prevalent in three domains: in the workplace, during transport and during leisure time. The correlates of prolonged sitting time in workplace settings are not well understood. Therefore, the aim of this study was to examine the gender-specific associations between the socio-demographic, behavioural and cognitive correlates of work-related sitting time. Methods: A cross-sectional sample of working German adults (n = 1515; 747 men; 43.5 ± 11.0 years) completed questionnaires regarding domain-specific sitting times and physical activity (PA) and answered statements concerning beliefs about sitting. To identify gender-specific correlates of work-related sitting time, we used a series of linear regressions. Results: The overall median was 2 hours of work-related sitting time/day. Regression analyses showed for men (β = -.43) and for women (β = -.32) that work-related PA was negatively associated with work-related sitting time, but leisure-related PA was not a significant correlate. For women only, transport-related PA (β = -.07) was a negative correlate of work-related sitting time, suggesting increased sitting times during work with decreased PA in transport. Education and income levels were positively associated, and in women only, age (β = -.14) had a negative correlation with work-related sitting time. For both genders, TV-related sitting time was negatively associated with work-related sitting time. The only association with cognitive correlates was found in men for the belief 'Sitting for long periods does not matter to me' (β = .10) expressing a more positive attitude towards sitting with increasing sitting durations. Conclusions: The present findings show that in particular, higher educated men and women as well as young women are high-risk groups to target for reducing prolonged work-related sitting time. In addition, our findings propose considering increasing transport-related PA, especially in women, as well as promoting recreation-related PA in conjunction with efforts to reduce long work-related sitting times.}, language = {en} } @article{WagnerKraemerBlohmetal.2014, author = {Wagner, Martin and Kr{\"a}mer, Johannes and Blohm, Elisabeth and Vergho, Dorothee and Weidemann, Frank and Breunig, Frank and Wanner, Christoph}, title = {Kidney function as an underestimated factor for reduced health related quality of life in patients with Fabry disease}, doi = {10.1186/1471-2369-15-188}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-111159}, year = {2014}, abstract = {Background: Impairments of health related quality of life (HRQoL) are frequently observed in Fabry disease (FD) and are known to be related to neuropathic pain and cardiovascular events. This study aimed to explore the role of chronic kidney disease (CKD) in a large cohort of patients with FD. Methods: In 96 patients (53\% female; age 40 ± 12 yrs) with genetically proven FD, HRQoL was assessed by the Medical Outcomes Study (SF-36) questionnaire. All patients were na{\"i}ve to enzyme replacement therapy. Three categories for kidney dysfunction were chosen, eGFR ≥/<60 ml/min/1.73 m2 or need of renal replacement therapy (RRT). Minor (e.g. arrhythmia, angina pectoris, etc.) and major (e.g. myocardial infarction, coronary artery bypass, stroke or implantable cardioverter-defibrillator) vascular events as well as pain and pain therapy were considered in linear regression analyses with the dimensions of HRQoL. Results: Ten patients (10\%) had impaired kidney function and a further nine were on RRT (9.4\%). Kidney function and pain emerged as the main factors associated with lower scores on the SF 36, in particular on physical components (PCS beta-coefficients for CKD -6.2, for RRT -11.8, for pain -9.1, p < 0.05, respectively), while controlling for gender, vascular event and pain-therapy. Relationships were found for mental aspects of HRQoL. Age and history of vascular events were not related to HRQoL. Conclusion: Cardiovascular events and pain are important factors related to HRQoL, social functioning and depression. Our study highlights impaired chronic kidney disease, in particular after initiation of RRT, as a strong determinant of reduced HRQoL in FD.}, language = {en} } @article{WagnerVolkmerSharanetal.2014, author = {Wagner, Ines and Volkmer, Michael and Sharan, Malvika and Villaveces, Jose M. and Oswald, Felix and Surendranath, Vineeth and Habermann, Bianca H.}, title = {morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring}, series = {BMC Bioinformatics}, volume = {15}, journal = {BMC Bioinformatics}, number = {263}, doi = {10.1186/1471-2105-15-263}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-115590}, year = {2014}, abstract = {Background: Searching the orthologs of a given protein or DNA sequence is one of the most important and most commonly used Bioinformatics methods in Biology. Programs like BLAST or the orthology search engine Inparanoid can be used to find orthologs when the similarity between two sequences is sufficiently high. They however fail when the level of conservation is low. The detection of remotely conserved proteins oftentimes involves sophisticated manual intervention that is difficult to automate. Results: Here, we introduce morFeus, a search program to find remotely conserved orthologs. Based on relaxed sequence similarity searches, morFeus selects sequences based on the similarity of their alignments to the query, tests for orthology by iterative reciprocal BLAST searches and calculates a network score for the resulting network of orthologs that is a measure of orthology independent of the E-value. Detecting remotely conserved orthologs of a protein using morFeus thus requires no manual intervention. We demonstrate the performance of morFeus by comparing it to state-of-the-art orthology resources and methods. We provide an example of remotely conserved orthologs, which were experimentally shown to be functionally equivalent in the respective organisms and therefore meet the criteria of the orthology-function conjecture. Conclusions: Based on our results, we conclude that morFeus is a powerful and specific search method for detecting remotely conserved orthologs.}, language = {en} } @phdthesis{Wagenhoefer2014, author = {Wagenh{\"o}fer, Julian}, title = {Mikro- und mesopor{\"o}se Silicate als Wirkstoffspeichersysteme}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-103848}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Mesopor{\"o}se Silica-Materialien (MSM) und mikropor{\"o}se Zeolithe besitzen große innere Oberfl{\"a}chen und eine damit verbundene hohe Speicherkapazit{\"a}t von verschiedenen Molek{\"u}len. Auf Grund dieser Eigenschaften stehen por{\"o}se, silicatische Materialien seit etwa 10 Jahren im Focus der Entwicklung neuartiger Wirkstoffspeichersysteme (WSS). Die innerhalb dieser Thematik ver{\"o}ffentlichten wissenschaftlichen Arbeiten konnten die Fragestellungen nach dem exakten Mechanismus der Wirkstoffspeicherung und Wiederfreisetzung bisher nicht komplett beantworten. Die vorliegende Arbeit besch{\"a}ftigt sich im Besonderen mit der Beladung und Abgabe des Lokalan{\"a}sthetikum Lidocain-Hydrochlorid (LidHCl) in bekannten MSM wie SBA15, MCM41 oder HMS, sowie in unterschiedlich modifizierten Zeolithen vom Typ FAU und BEA. Zus{\"a}tzlich wurde der Einfluss von organischen Ankergruppen innerhalb der Porenstruktur von SBA15 auf dessen Sorptions-eigenschaften hin untersucht. Ziel der Promotionsarbeit ist die Aufkl{\"a}rung des Speicher- und Freisetzungs-mechanismus dieses speziellen Speichersystems. Dazu wurden zun{\"a}chst detaillierte Analysen der reinen und der mit Wirkstoff beladenen Matrizes via N2-Sorption (BET-, BJH-, t-plot-Methode), XRD, SAXS, DSC und TG durchgef{\"u}hrt. Außerdem wurden grafische Profile erstellt, die das Verh{\"a}ltnis der ad- bzw. desorbierten Wirkstoffmengen gegen die bei der Beladung eingesetzten Wirkstoffkonzentrationen (Speicherprofil) bzw. gegen die bei der Wiederfreisetzung verstrichene Zeit (Freisetzungsprofil) wiedergeben. Durch die Kombination dieser Untersuchungsmethoden konnte der jeweilige Sorptionsmechanismus, sowie der Speicherort der Wirkstoffmolek{\"u}le innerhalb der ausgew{\"a}hlten Matrix erfasst werden. Der Vergleich der verschiedenen, hier untersuchten Speichersysteme zeigt, dass neben der Porengr{\"o}ße, die Art der Adsorbens-Adsorbat-Wechselwirkung, aber auch die Stabilit{\"a}t der Porenstruktur einen großen Einfluss auf die Sorption von Molek{\"u}len nimmt.}, subject = {Silicate}, language = {de} } @phdthesis{Voelker2014, author = {V{\"o}lker, Sebastian}, title = {Synthesis, Spectroscopic and Electrochemical Properties of Squaraine Polymers}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-101638}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {In this work the synthesis, the spectroscopic and electrochemical investigation as well as some applications of a broad diversity of indolenine squaraine dyes were presented. This diversity was based on two parent squaraine dyes, one standard trans-configured compound (M1) and one in which one central oxygen atom was replaced by a dicyanomethylene moiety (M2), which increased the acceptor strength and induced a cis-configuration. The variety of synthesised dyes included functionalised squaraine monomers, donor- and acceptor-substituted monomeric model squaraines, donor- and acceptor-squaraine copolymers, pure squaraine homopolymers, a squaraine-squaraine copolymer, as well as some conjugated cyclic oligomers. In order to be able to synthesise all these different kinds of dyes, several bromine and boronic ester derivatives were synthesised, which enabled the use of the Suzuki cross coupling reaction, to generate model dyes and copolymers. In addition, the bromine derivatives were used to carry out the Yamamoto homocoupling reaction to the respective homopolymers and macrocycles. The absorption maximum of unsubstituted reference dye M1 was found at ~ 15500 cm-1, while that of M2 was red-shifted to ~ 14300 cm-1 due to the increased acceptor strength of the central unit. The extinction coefficients were in the order of ~ 300000 M-1 cm-1 and ~ 200000 M-1 cm-1, respectively. It was found that the implementation of functional groups (M3-M9), additional electron donors (M10-M19) or acceptors (M20-M22) at the periphery lead to bathochromic shifts of the absorption depending on the strength of either - and/or -donating properties of the substituents. For the bis- and triarylamine substituted dyes M10-M13 and the dibrominated dyes M5 and M7 the electronic structure of the mono- and diradical (di)cations was explored using the interplay of cyclic voltammetry, spectroelectrochemistry, and DFT calculations. It was demonstrated that the monoradical cations still show a cyanine-like character and are delocalised Robin-Day class III species due to the low redox potential of the squaraine bridge between the additional amine redox centres. To the best of my knowledge, this made M13+∙, with an N-N-distance of 26 bonds between the additional redox centres to the longest bis(triarylamine) radical cation that is completely delocalised. For the diradical dications, the situation was of larger complexity. The computed most stable energetic state of the dianisylamine-substituted dyes turned out to be a broken-symmetry state with almost equal contributions of an open-shell singlet and triplet state. In addition, it was shown that the HOMO-1→HOMO transition dominated the absorption spectra of the diradical dications where the trans-/cis-configuration of the squaraines had a direct impact due to symmetry reasons. Based on the donor-squaraine model compounds M10-M19, a series of donor-squaraine copolymers was synthesised (P7-P12) in order to further red shift and broaden the low energy absorption band. However, these effects were only of marginal extent. Both the optical and the electrochemical derived band gaps were barely lowered compared to the respective monomeric model dyes. This was assigned to an increased squaraine-squaraine distance and resulting lower exciton coupling between the squaraine chromophores due to the bridging units. In addition, according to semiempirical calculations the bridges were twisted out of the squaraine plane what reduced conjugational effects between the chromophores. To sum up, the idea to insert additional electron rich bridging units in order to create copolymers with broad and red-shifted absorption did not fully work out for the presented systems. The addition of strong electron accepting NDI units at the periphery resulted in M21, the most unique monomeric model squaraine in this work. The common picture of a sharp low energy squaraine absorption completely altered due to the addition of the NDIs and a rather broad and solvent dependent low energy absorption was found. Spectroelectrochemical experiments and semiempirical calculations showed that this band is a superposition of the common squaraine HOMO→LUMO transition and a partial squaraine→NDI charge transfer transition. The latter was lost upon oxidation of the squaraine and the absorption spectrum of the monocation of M21 was found to be nearly a 1:1 image of a pure squaraine monocation. Both the monomeric model M21 and the respective copolymer P13 showed low electrochemically obtained band gaps of 1.05-1.20 eV, which were the lowest of all squaraines in this work. For both dyes, transient absorption measurements in the fs-time regime revealed the ultrafast formation of a CS state via an intermediate CT state within a few ps. Besides, charge recombination to the ground state also occured within a few ps. In the polymer, there was barely any further energy or charge transfer within the excited state lifetime and therefore the CS state was confined on adjacent squaraine-NDI pairs and did not further travel along the polymer strand. The Ni-mediated Yamamoto homocoupling reaction was applied for the synthesis of the homopolymers (P1-P5). In contrast to the donor-squaraine copolymers, those polymers revealed strongly red-shifted and broad absorption in the red to NIR region in addition to a sharp fluorescence. These features could be explained to originate mainly from the exciton coupling of localised excited states and the presence of different superstructures in solution. For the polymers P1 and P2, an elongated J-type polymer chain caused the strong lowest energy absorption band whereas a zig-zag type arrangement of the single chromophores lead to transitions into both low and high energy excited states of the excitonic manifold. For the polymers P3 and P4, several polymer fractions of different size were investigated. Here, also an elongated chain with J-type character induced the lowest energy absorption band whereas a helical H-type arrangement caused transitions to higher energies of the excitonic manifold. The fractions to which these structures were formed depended on the chain length and the solvent. In thin film measurements, it was shown that the initially in solution formed superstructures were partly retained in the thin film but could be altered by annealing procedures. A control of the superstructures should enable the controlled tuning of the optical properties. Despite the strong interaction of the chromophores in the excited state, the redox potentials of the homopolymers barely differed to those of the respective reference dyes, indicating negligible electronic interaction in the ground state. In addition squaraine-squaraine copolymer P6, consisting of alternating parent dyes M1 and M2, was synthesised. Likewise to the homopolymers, a broad and red-shifted absorption was observed. This was explained by exciton coupling theory, which was extended to also suit alternating copolymers. In toluene, an extraordinary narrow and intense lowest energy absorption band was observed. This exchange narrowing might be a result of a highly ordered J-type structure of the polymer especially in this solvent because it was not found in others. The features of the polymer may be compared to typical J-aggregates formed from monomeric cyanine molecules for example and the polymer used as model for excitonic interactions in an alternating copolymer. Transient absorption measurements revealed a strong energy dependence of the decay traces of the copolymer, most strikingly at early decay times. This was assigned to the occurrence of multiple excitations of one polymer strand (due to the large extinction coefficients of the polymer) and resulting exciton-exciton annihilation. Due to the large exciton diffusion constants that were estimated, the static exciton-exciton annihilation was the rate limiting process of the decay, in contrast to other conjugated polymers, where in thin film measurements the decay was diffusion controlled. To sum up, for the polymers consisting of exclusively squaraine chromophores, it was shown that the exciton coupling of single chromophores with strong transition dipole moments was a fruitful way to tune the absorption spectra. As a side product of some of the polycondensation reactions, unprecedented cyclic conjugated oligomers such as the triarylamine-bridged dimer Dim1, the cyclic homotrimers Tri1-Tri3, and the tetramer Tet1 were obtained by recycling GPC in low yields. Especially the cyclic trimers showed unusual absorption and even more extraordinary fluorescence properties. They showed multiple fluorescence bands in the NIR that covered a range from ~ 8000-12500 cm-1 (800-1250 nm). First hints from theoretical calculations indicated that the trimer was not fully planar but comprised a mixture of both planar and bent single squaraine chromophores. However, final results of the calculations were still missing at the time of writing. In the last part of this work, the application of some monomeric and polymeric squaraines in binary and ternary bulk heterojunction solar cells was demonstrated. Also the utilisation as a dopant in a polymer matrix in an OLED device was shown. The homopolymers P1-P4 were tested in the binary BHJ solar cells revealing poor performances and especially very low short circuit currents. The utilisation of the polymers P3 and P4 that carried the dicyanomethylene group resulted in higher open circuit voltages due to the lower LUMO energy levels but still an overall poor performance. Neither for the different alkyl chains nor for the size of the polymers was a trend observed. In the ternary BHJ solar cells, small amounts of either monomer M14 or polymers P1A, P4-1 or P13 were added to a P3HT/PCBM system in order to generate an additional pathway for charge or energy transfer that should result in a better device performance. However, for none of the tested squaraines, improved solar cells could be built. In similarity to the binary solar cells, the short circuit currents were lower compared to a P3HT/PCBM reference device. These low short circuit currents indicated that the morphology of the squaraine dyes was the major limitation in those devices. It is possible that the dimethyl groups at the indolenine hindered a favoured alignment of the compounds that would allow decent charge transport. In the squaraine doped OLED the squaraine M6 worked rather well as an NIR emitter. Already at low dye loads the fluorescence of the host polymer SY-PPV was completely quenchend and emission from the squaraine was observed. For electroluminescence measurements, a lower dye load (0.5 wt.\%) compared to the photoluminescence measurements was sufficient, indicating that apart from FRET additional quenching mechanisms were at work in the electrically driven devices such as charge carrier dynamics.}, subject = {Squaraine}, language = {en} } @phdthesis{Voegtle2014, author = {V{\"o}gtle, Timo}, title = {Studies on receptor signaling and regulation in platelets and T cells from genetically modified mice}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-97114}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Receptors with tyrosine-based signaling motifs control essential functions of hematopoietic cells, including lymphocytes and platelets. Downstream of the platelet receptor glycoprotein (GP) VI and the T cell receptor (TCR) the immunoreceptor tyrosine-based activation motif (ITAM) initiates a signaling cascade that involves kinases, adapter and effector proteins and finally leads to cellular activation. This thesis summarizes the results of three studies investigating different aspects of receptor signaling and regulation in platelets and T cells. In the first part, the impact of constitutive Ca2+ influx on TCR signaling and T cell physiology was investigated using a transgenic mouse line with a mutation in the Ca2+ sensor stromal interaction molecule 1 (STIM1). The elevated cytoplasmic Ca2+ level resulted in an altered phosphorylation pattern of the key enzyme phospholipase (PL) Cγ1 in response to TCR stimulation, but without affecting its enzymatic activity. Withdrawal of extracellular Ca2+ or inhibition of the phosphatase calcineurin restored the normal phosphorylation pattern. In addition, there was a decrease in the release of Th2-type cytokines interleukin 4, 5 and 13 upon stimulation in vitro. The second part of the thesis deals with the role of the adapter protein growth factor receptor-bound protein 2 (Grb2) in platelets using a megakaryocyte/platelet-specific knockout mouse line. Loss of Grb2 severely impaired signaling of GPVI and C-type lectin-like receptor 2 (CLEC-2), a related hemITAM receptor. This was attributed to defective stabilization of the linker for activation of T cells (LAT) signalosome and resulted in reduced adhesion, aggregation, Ca2+ mobilization and procoagulant activity downstream of (hem)ITAM-coupled receptors in vitro. In contrast, the signaling pathways of G protein-coupled receptors (GPCRs) and the integrin αIIbβ3, which do not utilize the LAT signalosome, were unaffected. In vivo, the defective (hem)ITAM signaling caused prolonged bleeding times, however, thrombus formation was only affected under conditions where GPCR signaling was impaired (upon acetylsalicylic acid treatment). These results establish Grb2 as an important adapter protein in the propagation of GPVI- and CLEC-2-induced signals. Finally, the proteolytic regulation of the immunoreceptor tyrosine-based switch motif (ITSM)-bearing receptor CD84 in platelets was investigated. This study demonstrated that in mice CD84 is cleaved by two distinct and independent proteolytic mechanisms upon platelet activation: shedding of the extracellular part, which is exclusively mediated by a disintegrin and metalloproteinase (ADAM) 10 and cleavage of the intracellular C-terminus by the protease calpain. Finally, the analysis of soluble CD84 levels in the plasma of transgenic mice revealed that shedding of CD84 by ADAM10 occurs constitutively in vivo.}, subject = {Thrombozyt}, language = {en} } @misc{Vorbach2014, type = {Master Thesis}, author = {Vorbach, Paul}, title = {Analysen und Heuristiken zur Verbesserung von OCR-Ergebnissen bei Frakturtexten}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-106527}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Zahlreiche Digitalisierungsprojekte machen das Wissen vergangener Jahrhunderte jederzeit verf{\"u}gbar. Das volle Potenzial der Digitalisierung von Dokumenten entfaltet sich jedoch erst, wenn diese als durchsuchbare Volltexte verf{\"u}gbar gemacht werden. Mithilfe von OCR-Software kann die Erfassung weitestgehend automatisiert werden. Fraktur war ab dem 16. Jahrhundert bis zur Mitte des 20. Jahrhunderts die verbreitete Schrift des deutschen Sprachraums. Durch einige Besonderheiten von Fraktur bleiben die Erkennungsraten bei Frakturtexten aber meist deutlich hinter den Erkennungsergebnissen bei Antiquatexten zur{\"u}ck. Diese Arbeit konzentriert sich auf die Verbesserung der Erkennungsergebnisse der OCR-Software Tesseract bei Frakturtexten. Dazu wurden die Software und bestehende Sprachpakete gesondert auf die Eigenschaften von Fraktur hin analysiert. Durch spezielles Training und Anpassungen an der Software wurde anschließend versucht, die Ergebnisse zu verbessern und Erkenntnisse {\"u}ber die Effektivit{\"a}t verschiedener Ans{\"a}tze zu gewinnen. Die Zeichenfehlerraten konnten durch verschiedene Experimente von zuvor 2,5 Prozent auf 1,85 Prozent gesenkt werden. Außerdem werden Werkzeuge vorgestellt, die das Training neuer Schriftarten f{\"u}r Tesseract erleichtern und eine Evaluation der erzielten Verbesserungen erm{\"o}glichen.}, subject = {Optische Zeichenerkennung}, language = {de} } @phdthesis{Vona2014, author = {Vona, Barbara C.}, title = {Molecular Characterization of Genes Involved in Hearing Loss}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112170}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {The auditory system is an exquisitely complex sensory organ dependent upon the synchronization of numerous processes for proper function. The molecular characterization of hereditary hearing loss is complicated by extreme genetic heterogeneity, wherein hundreds of genes dispersed genome-wide play a central and irreplaceable role in normal hearing function. The present study explores this area on a genome-wide and single gene basis for the detection of genetic mutations playing critical roles in human hearing. This work initiated with a high resolution SNP array study involving 109 individuals. A 6.9 Mb heterozygous deletion on chromosome 4q35.1q35.2 was identified in a syndromic patient that was in agreement with a chromosome 4q deletion syndrome diagnosis. A 99.9 kb heterozygous deletion of exons 58-64 in USH2A was identified in one patient. Two homozygous deletions and five heterozygous deletions in STRC (DFNB16) were also detected. The homozygous deletions alone were enough to resolve the hearing impairment in the two patients. A Sanger sequencing assay was developed to exclude a pseudogene with a high percentage sequence identity to STRC from the analysis, which further solved three of the six heterozygous deletion patients with the hemizygous, in silico predicted pathogenic mutations c.2726A>T (p.H909L), c.4918C>T (p.L1640F), and c.4402C>T (p.R1468X). A single patient who was copy neutral for STRC and without pathogenic copy number variations had compound heterozygous mutations [c. 2303_2313+1del12 (p.G768Vfs*77) and c.5125A>G (p.T1709A)] in STRC. It has been shown that STRC has been previously underestimated as a hearing loss gene. One additional patient is described who does not have pathogenic copy number variation but is the only affected member of his family having hearing loss with a paternally segregating translocation t(10;15)(q26.13;q21.1). Twenty-four patients without chromosomal aberrations and the above described patient with an USH2A heterozygous deletion were subjected to a targeted hearing loss gene next generation sequencing panel consisting of either 80 or 129 hearing-relevant genes. The patient having the USH2A heterozygous deletion also disclosed a second mutation in this gene [c.2276G>T (p.C759F)]. This compound heterozygous mutation is the most likely cause of hearing loss in this patient. Nine mutations in genes conferring autosomal dominant hearing loss [ACTG1 (DFNA20/26); CCDC50 (DFNA44); EYA4 (DFNA10); GRHL2 (DFNA28); MYH14 (DFNA4A); MYO6 (DFNA22); TCF21 and twice in MYO1A (DFNA48)] and four genes causing autosomal recessive hearing loss were detected [GJB2 (DFNB1A); MYO7A (DFNB2); MYO15A (DFNB3), and USH2A]. Nine normal hearing controls were also included. Statistical significance was achieved comparing controls and patients that revealed an excess of mutations in the hearing loss patients compared to the control group. The family with the GRHL2 c.1258-1G>A mutation is only the second family published worldwide with a mutation described in this gene to date, supporting the initial claim of this gene causing DFNA28 hearing loss. Audiogram analysis of five affected family members uncovered the progressive nature of DFNA28 hearing impairment. Regression analysis predicted the annual threshold deterioration in each of the five family members with multiple audiograms available over a number of years.}, subject = {Molekularbiologie}, language = {en} } @phdthesis{Vona2014, author = {Vona, Barbara C.}, title = {Molecular Characterization of Genes Involved in Hearing Loss}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-98031}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {The auditory system is an exquisitely complex sensory organ dependent upon the synchronization of numerous processes for proper function. The molecular characterization of hereditary hearing loss is complicated by extreme genetic heterogeneity, wherein hundreds of genes dispersed genome-wide play a central and irreplaceable role in normal hearing function. The present study explores this area on a genome-wide and single gene basis for the detection of genetic mutations playing critical roles in human hearing. This work initiated with a high resolution SNP array study involving 109 individuals. A 6.9 Mb heterozygous deletion on chromosome 4q35.1q35.2 was identified in a syndromic patient that was in agreement with a chromosome 4q deletion syndrome diagnosis. A 99.9 kb heterozygous deletion of exons 58-64 in USH2A was identified in one patient. Two homozygous deletions and five heterozygous deletions in STRC (DFNB16) were also detected. The homozygous deletions alone were enough to resolve the hearing impairment in the two patients. A Sanger sequencing assay was developed to exclude a pseudogene with a high percentage sequence identity to STRC from the analysis, which further solved three of the six heterozygous deletion patients with the hemizygous, in silico predicted pathogenic mutations c.2726A>T (p.H909L), c.4918C>T (p.L1640F), and c.4402C>T (p.R1468X). A single patient who was copy neutral for STRC and without pathogenic copy number variations had compound heterozygous mutations [c. 2303_2313+1del12 (p.G768Vfs*77) and c.5125A>G (p.T1709A)] in STRC. It has been shown that STRC has been previously underestimated as a hearing loss gene. One additional patient is described who does not have pathogenic copy number variation but is the only affected member of his family having hearing loss with a paternally segregating translocation t(10;15)(q26.13;q21.1). Twenty-four patients without chromosomal aberrations and the above described patient with an USH2A heterozygous deletion were subjected to a targeted hearing loss gene next generation sequencing panel consisting of either 80 or 129 hearing-relevant genes. The patient having the USH2A heterozygous deletion also disclosed a second mutation in this gene [c.2276G>T (p.C759F)]. This compound heterozygous mutation is the most likely cause of hearing loss in this patient. Nine mutations in genes conferring autosomal dominant hearing loss [ACTG1 (DFNA20/26); CCDC50 (DFNA44); EYA4 (DFNA10); GRHL2 (DFNA28); MYH14 (DFNA4A); MYO6 (DFNA22); TCF21 and twice in MYO1A (DFNA48)] and four genes causing autosomal recessive hearing loss were detected [GJB2 (DFNB1A); MYO7A (DFNB2); MYO15A (DFNB3), and USH2A]. Nine normal hearing controls were also included. Statistical significance was achieved comparing controls and patients that revealed an excess of mutations in the hearing loss patients compared to the control group. The family with the GRHL2 c.1258-1G>A mutation is only the second family published worldwide with a mutation described in this gene to date, supporting the initial claim of this gene causing DFNA28 hearing loss. Audiogram analysis of five affected family members uncovered the progressive nature of DFNA28 hearing impairment. Regression analysis predicted the annual threshold deterioration in each of the five family members with multiple audiograms available over a number of years.}, subject = {Molekularbiologie}, language = {en} } @article{vonBernuthRavindranDuetal.2014, author = {von Bernuth, Horst and Ravindran, Ethiraj and Du, Hang and Froehler, Sebastian and Strehl, Karoline and Kraemer, Nadine and Issa-Jahns, Lina and Amulic, Borko and Ninnemann, Olaf and Xiao, Mei-Sheng and Eirich, Katharina and Koelsch, Uwe and Hauptmann, Kathrin and John, Rainer and Schindler, Detlev and Wahn, Volker and Chen, Wei and Kaindl, Angela M.}, title = {Combined immunodeficiency develops with age in Immunodeficiency-centromeric instability-facial anomalies syndrome 2 (ICF2)}, series = {Orphanet Journal of Rare Dieeases}, volume = {9}, journal = {Orphanet Journal of Rare Dieeases}, doi = {10.1186/s13023-014-0116-6}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-114859}, pages = {116}, year = {2014}, abstract = {The autosomal recessive immunodeficiency-centromeric instability-facial anomalies syndrome (ICF) is characterized by immunodeficiency, developmental delay, and facial anomalies. ICF2, caused by biallelic ZBTB24 gene mutations, is acknowledged primarily as an isolated B-cell defect. Here, we extend the phenotype spectrum by describing, in particular, for the first time the development of a combined immune defect throughout the disease course as well as putative autoimmune phenomena such as granulomatous hepatitis and nephritis. We also demonstrate impaired cell-proliferation and increased cell death of immune and non-immune cells as well as data suggesting a chromosome separation defect in addition to the known chromosome condensation defect.}, language = {en} } @phdthesis{Volkmann2014, author = {Volkmann, Maximillian Ruben}, title = {Mittelfristige Ergebnisse des minimal-invasiven anterioren Zugangs im Vergleich mit dem lateralen Zugang zur Implantation von prim{\"a}ren H{\"u}fttotalendoprothesen}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-136763}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {In einer st{\"a}ndig {\"a}lter werdenden Bev{\"o}lkerung, in der auch die Senioren einen unver{\"a}ndert hohen Anspruch an ihre Lebensqualit{\"a}t aufrechterhalten, kommt dem Ersatz verschlissener Gelenke und hier besonders der H{\"u}ftendoprothetik eine st{\"a}ndig wachsende Bedeutung zu. Ausgehend von den Erfolgen der minimal-invasiven Chirurgie in anderen chirurgischen Disziplinen entwickelte sich dieser Zweig seit Beginn des Jahrtausendes auch in der H{\"u}ftchirurgie: 2005 stellte Rachbauer eine minimal-invasive Variante des seit 1887 bekannten anterioren Zugangs zur H{\"u}fttotalendoprothesenimplantation vor. Zum kurzfristigen postoperativen Intervall existieren bereits zahlreiche Studien. Hier zeigt der anteriore Zugang entscheidende Vorteile im Vergleich zu anderen Zug{\"a}ngen. Hervorzuheben sind ein geringeres postoperatives Schmerzausmaß, eine k{\"u}rzere station{\"a}re Liegedauer und eine schnellere Rehabiliation. Ein gravierender Nachteil des anterioren Zugangs besteht darin, dass er aufgrund des schmalen Operationskanals eine hohe Qualifikation des Operateurs erfordert und mit einer anf{\"a}nglich erh{\"o}hten Komplikationsrate vergesellschaftet sein kann. Ziel der vorliegenden Arbeit war es, die Resultate des minimal-invasiven anterioren Zugangs in einem mittelfristigen postoperativen Intervall mit den Resultaten des lateralen Zugangs, den man als eine weithin etablierte konventionelle Methode betrachten kann, zu vergleichen. Untersucht wurden 85 {\"u}ber einen minimal-invasiven anterioren Zugang implantierte prim{\"a}re H{\"u}fttotalendoprothesen nach durchschnittlich 3,7 Jahren post operationem, denen 86 F{\"a}lle mit einem lateralen Zugang nach durchschnittlich 5,5 Jahren entgegengestellt wurden. Beide Gruppen unterschieden sich nicht signifikant in Alter und Geschlechterverteilung. Der signifikante Unterschied der Nachuntersuchungsintervalle ist ohne Relevanz, da sich sich beide Gruppen in einer komplikationsarmen postoperativen Phase befinden, die in etwa vom 2. bis zum 10. Postoperativen Jahr geht. Die Gruppen wurden in Funktion (HHS), Aktivit{\"a}t (UCLA activity score), Schmerzen (abgeleitet aus dem HHS), Komplikationsraten und Gesundheitsempfinden (SF-36) miteinander verglichen. Die vorliegende Arbeit kam zu den folgenden Ergebnissen {\"u}ber den mittelfristigen Zeitraum: Die Unterschiede in der Funktion waren marginal, die HHS-Durchschnittswerte in beiden Gruppen waren exzellent und nicht signifikant unterschiedlich. Ebenso zeigten beide Gruppen gleichwertige Ergebnisse im subjektiven Gesundheitsempfinden (SF-36). Ein weiteres wichtiges Erfolgskriterium war die Frage nach der durch die Operation erreichten Aktivit{\"a}t. Hier fand sich eine Diskrepanz zwischen UCLA und TWB. Der UCLA ist zur Aktivit{\"a}tsmessung weit verbreitet. Im UCLA zeigten sich die Patienten der lateralen Gruppe aktiver. Der TWB ergab gleiche Aktivit{\"a}t in beiden Gruppen. Nach dem eingehenden Vergleich beider Frageb{\"o}gen, kamen wir in dieser Arbeit jedoch zu der Auffassung, dass der UCLA zwar als ein schnell erhebbarer Test f{\"u}r den klinischen Alltag praktisch ist, der wesentlich aufwendigere TWB aber zuverl{\"a}ssigere Ergebnisse liefert. Die Komplikationsraten waren in beiden Gruppen gering. Die Wahrscheinlichkeit, eine der erfassten Komplikationen zu erleiden, betrug 10,7\% f{\"u}r den minimal-invasiven und 10,5\% f{\"u}r den klassischen Zugang. Um aber nicht nur die Quantit{\"a}t, sondern auch die Qualit{\"a}t der aufgetretenen Komplikationen erfassen zu k{\"o}nnen, wurde in dieser Arbeit der Komplikationsindex eingef{\"u}hrt, der die registrierten Komplikationen in Gruppen verschiedener Schweregrade unterteilt. Eine schwere Komplikation floss mit 10 Punkten, eine mittlere mit 5 und eine leichte Komplikation mit einem Punkt in den Komplikationsindex ein. Der anteriore Zugang zeigte so mit insgesamt 26 Punkten einen deutlich geringeren Komplikationsindex als der laterale mit insgesamt 60 Punkten. Dem entsprach eine Reoperationsrate von 1,2\% unter den anterioren Patienten im Vergleich zu 3,3\% bei den lateralen. Die Schaft- und die Pfannen{\"u}berlebensrate lag in beiden Gruppen bei 100\%. Zusammenfassend zeigt die vorliegende Arbeit, dass der anteriore Zugang viele Vorteile gegen{\"u}ber dem lateralen Zugang aufweist. Die entscheidenden Unterschiede finden sich im kurzfristigen postoperativen Zeitraum. Zu einem mittelfristigen Zeitpunkt erzielen beide Zug{\"a}nge gleichwertige Ergebnisse. Welche langfristigen Resultate das noch relativ junge Verfahren des minimal-invasiven anterioren Zugangs hervorbringen wird, muss durch k{\"u}nftige prospektiv randomisierte Studien großer Fallzahlen belegt werden.}, subject = {Koxarthrose}, language = {de} } @article{VolkertZierhutSchieleetal.2014, author = {Volkert, Julia and Zierhut, Kathrin C. and Schiele, Miriam A. and Wenzel, Martina and Kopf, Juliane and Kittel-Schneider, Sarah and Reif, Andreas}, title = {Predominant polarity in bipolar disorder and validation of the polarity index in a German sample}, doi = {10.1186/s12888-014-0322-8}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-111042}, year = {2014}, abstract = {Background: A large number of patients with bipolar disorder (BD) can be characterized by predominant polarity (PP), which has important implications for relapse prevention. Recently, Popovic et al. (EUR NEUROPSYCHOPHARM 22(5): 339-346, 2012) proposed the Polarity Index (PI) as a helpful tool in the maintenance treatment of BD. As a numeric expression, it reflects the efficacy of drugs used in treatment of BD. In the present retrospective study, we aimed to validate this Index in a large and well characterized German bipolar sample. Methods: We investigated 336 bipolar patients (BP) according to their PP and calculated the PI for each patient in order to prove if maintenance treatment differs according to their PP. Furthermore, we analysed whether PP is associated with demographic and clinical characteristics of BP. Results: In our sample, 63.9\% of patients fulfilled criteria of PP: 169 patients were classified as depressive predominant polarity (DPP), 46 patients as manic predominant polarity (MPP). The two groups differed significantly in their drug regime: Patients with DPP were more often medicated with lamotrigine and antidepressants, patients with MPP were more often treated with lithium, valproate, carbamazepine and first generation antipsychotics. However, patients with DPP and MPP did not differ significantly with respect to the PI, although they received evidence-based and guideline-driven treatment. Conclusion: The reason for this negative finding might well be that for several drugs, which were used frequently, no PI value is available. Nevertheless we suggest PP as an important concept in the planning of BD maintenance treatment.}, language = {en} } @article{VolceanovHerbstBiniosseketal.2014, author = {Volceanov, Larisa and Herbst, Katharina and Biniossek, Martin and Schilling, Oliver and Haller, Dirk and N{\"o}lke, Thilo and Subbarayal, Prema and Rudel, Thomas and Zieger, Barbara and H{\"a}cker, Georg}, title = {Septins Arrange F-Actin-Containing Fibers on the Chlamydia trachomatis Inclusion and Are Required for Normal Release of the Inclusion by Extrusion}, series = {MBIO}, volume = {5}, journal = {MBIO}, number = {5}, issn = {2150-7511}, doi = {10.1128/mBio.01802-14}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-115421}, pages = {e01802-14}, year = {2014}, abstract = {Chlamydia trachomatis is an obligate intracellular human pathogen that grows inside a membranous, cytosolic vacuole termed an inclusion. Septins are a group of 13 GTP-binding proteins that assemble into oligomeric complexes and that can form higher-order filaments. We report here that the septins SEPT2, -9, -11, and probably -7 form fibrillar structures around the chlamydial inclusion. Colocalization studies suggest that these septins combine with F actin into fibers that encase the inclusion. Targeting the expression of individual septins by RNA interference (RNAi) prevented the formation of septin fibers as well as the recruitment of actin to the inclusion. At the end of the developmental cycle of C. trachomatis, newly formed, infectious elementary bodies are released, and this release occurs at least in part through the organized extrusion of intact inclusions. RNAi against SEPT9 or against the combination of SEPT2/7/9 substantially reduced the number of extrusions from a culture of infected HeLa cells. The data suggest that a higher-order structure of four septins is involved in the recruitment or stabilization of the actin coat around the chlamydial inclusion and that this actin recruitment by septins is instrumental for the coordinated egress of C. trachomatis from human cells. The organization of F actin around parasite-containing vacuoles may be a broader response mechanism of mammalian cells to the infection by intracellular, vacuole-dwelling pathogens. IMPORTANCE Chlamydia trachomatis is a frequent bacterial pathogen throughout the world, causing mostly eye and genital infections. C. trachomatis can develop only inside host cells; it multiplies inside a membranous vacuole in the cytosol, termed an inclusion. The inclusion is covered by cytoskeletal "coats" or "cages," whose organization and function are poorly understood. We here report that a relatively little-characterized group of proteins, septins, is required to organize actin fibers on the inclusion and probably through actin the release of the inclusion. Septins are a group of GTP-binding proteins that can organize into heteromeric complexes and then into large filaments. Septins have previously been found to be involved in the interaction of the cell with bacteria in the cytosol. Our observation that they also organize a reaction to bacteria living in vacuoles suggests that they have a function in the recognition of foreign compartments by a parasitized human cell.}, language = {en} } @phdthesis{Vogt2014, author = {Vogt, Gernot}, title = {Future changes and signal analyses of climate means and extremes in the Mediterranean Area deduced from a CMIP3 multi-model ensemble}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117369}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Considering its social, economic and natural conditions the Mediterranean Area is a highly vulnerable region by designated affections of climate change. Furthermore, its climatic characteristics are subordinated to high natural variability and are steered by various elements, leading to strong seasonal alterations. Additionally, General Circulation Models project compelling trends in specific climate variables within this region. These circumstances recommend this region for the scientific analyses conducted within this study. Based on the data of the CMIP3 database, the fundamental aim of this study is a detailed investigation of the total variability and the accompanied uncertainty, which superpose these trends, in the projections of temperature, precipitation and sea-level pressure by GCMs and their specific realizations. Special focus in the whole study is dedicated to the German model ECHAM5/MPI-OM. Following this ambition detailed trends and mean values are calculated and displayed for meaningful time periods and compared to reanalysis data of ERA40 and NCEP. To provide quantitative comparison the mentioned data are interpolated to a common 3x3° grid. The total amount of variability is separated in its contributors by the application of an Analysis of Variance (ANOVA). For individual GCMs and their ensemble-members this is done with the application of a 1-way ANOVA, separating a treatment common to all ensemble-members and variability perturbating the signal given by different initial conditions. With the 2-way ANOVA the projections of numerous models and their realizations are analysed and the total amount of variability is separated into a common treatment effect, a linear bias between the models, an interaction coefficient and the residuals. By doing this, the study is fulfilled in a very detailed approach, by considering yearly and seasonal variations in various reasonable time periods of 1961-2000 to match up with the reanalysis data, from 1961-2050 to provide a transient time period, 2001-2098 with exclusive regard on future simulations and 1901-2098 to comprise a time period of maximum length. The statistical analyses are conducted for regional-averages on the one hand and with respect to individual grid-cells on the other hand. For each of these applications the SRES scenarios of A1B, A2 and B1 are utilized. Furthermore, the spatial approach of the ANOVA is substituted by a temporal approach detecting the temporal development of individual variables. Additionally, an attempt is made to enlarge the signal by applying selected statistical methods. In the detailed investigation it becomes evident, that the different parameters (i.e. length of temporal period, geographic location, climate variable, season, scenarios, models, etc…) have compelling impact on the results, either in enforcing or weakening them by different combinations. This holds on the one hand for the means and trends but also on the other hand for the contributions of the variabilities affecting the uncertainty and the signal. While temperature is a climate variable showing strong signals across these parameters, for precipitation mainly the noise comes to the fore, while for sea-level pressure a more differentiated result manifests. In turn, this recommends the distinguished consideration of the individual parameters in climate impact studies and processes in model generation, as the affecting parameters also provide information about the linkage within the system. Finally, an investigation of extreme precipitation is conducted, implementing the variables of the total amount of heavy precipitation, the frequency of heavy-precipitation events, the percentage of this heavy precipitation to overall precipitation and the mean daily intensity from events of heavy precipitation. Each time heavy precipitation is defined to exceed the 95th percentile of overall precipitation. Consecutively mean values of these variables are displayed for ECHAM5/MPI-OM and the multi-model mean and climate sensitivities, by means of their difference between their average of the past period of 1981-2000 and the average of one of the future periods of 2046-2065 or 2081-2100. Following this investigation again an ANOVA is conducted providing a quantitative measurement of the severity of change of trends in heavy precipitation across several GCMs. Besides it is a difficult task to account for extreme precipitation by GCMs, it is noteworthy that the investigated models differ highly in their projections, resulting partially in a more smoothed and meaningful multi-model mean. Seasonal alterations of the strength of this behaviour are quantitatively supported by the ANOVA.}, subject = {Klimaschwankung}, language = {en} } @phdthesis{Vogel2014, author = {Vogel, Natalie}, title = {Einfl{\"u}sse von anspruchsvollen H{\"o}rsituationen auf die Herzfrequenzvariabilit{\"a}t (HRV)}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-108595}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Als Herzfrequenzvariabilit{\"a}t (HRV) wird die Frequenz{\"a}nderung zwischen den einzelnen Herzaktionen bezeichnet. Da das autonome Nervensystem - vor allem {\"u}ber die respiratorische Sinusarrhythmie - einen großen Einfluss auf die HRV hat, kann umgekehrt von der HRV auf den aktuellen Zustand des autonomen Nervensystems r{\"u}ckgeschlossen werden. So ist bekannt, dass anhand der HRV Aussagen {\"u}ber die Prognose kritisch kranker Patienten auf Intensivstationen getroffen werden k{\"o}nnen. Aber auch k{\"o}rperliche und mentale Belastung ver{\"a}ndern die HRV messbar. Mit dem Ziel, den Einfluss anspruchsvoller H{\"o}rsituationen auf die HRV zu untersuchen, wurden bei 20 Probanden Sprachtests (Freiburger Einsilber) mit verschiedenen Schalldruckpegeln durchgef{\"u}hrt. Vor und w{\"a}hrend den Sprachtests erfolgte die Aufzeichnung eines EKG, aus dem verschiedene Komponenten der HRV berechnet wurden. Es zeigte sich, dass anspruchsvolle H{\"o}rsituationen die HRV beeinflussen. Komponenten der HRV {\"a}ndern sich sowohl mit steigender Schwierigkeit des Sprachtests, als auch gegen{\"u}ber einem Ruheintervall signifikant. Die Messung der HRV scheint deshalb eine M{\"o}glichkeit, H{\"o}ranstrengung objektiv messbar zu machen.}, subject = {Herzfrequenzvariabilit{\"a}t}, language = {de} } @phdthesis{Vielmuth2014, author = {Vielmuth, Franziska}, title = {Die Rolle von cAMP bei Pemphigus vulgaris}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-107757}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Desmosomen sind Zell-Zell-Kontakte, die eine starke interzellul{\"a}re Haftung vermitteln. Sie sind daher besonders wichtig f{\"u}r die Integrit{\"a}t von Geweben wie der Haut, die laufend einer starken mechanischen Beanspruchung ausgesetzt sind. Pemphigus vulgaris ist eine Autoimmundermatose, die zur Ausbildung schlaffer Blasen durch Spaltbildung in der Epidermis f{\"u}hrt. Als urs{\"a}chlich daf{\"u}r wurden Autoantik{\"o}rper gegen die desmosomalen Cadherine Dsg1 und 3 herausgestellt, die in Desmosomen vorkommen. cAMP ist ein wichtiger Botenstoff des Zellstoffwechsels und an der Regulierung und Modulation einer Vielzahl von zellul{\"a}ren Prozessen beteiligt, darunter auch die Stabilisierung der Endothelbarriere {\"u}ber St{\"a}rkung der Haftung eines klassischen Cadherins, n{\"a}mlich VE-Cadherin. In Ankn{\"u}pfung an die vorliegenden Daten aus Pemphigus- und Endothelforschung besch{\"a}ftigt sich diese Arbeit mit der Rolle von cAMP bei Pemphigus vulgaris. Es wurde in Keratinozytenkultur sowie im neonatalen Pemphigus-Mausmodell untersucht, ob die Erh{\"o}hung der intrazellul{\"a}ren cAMP-Spiegel einen Einfluss auf PV-IgG-induzierte morphologische und funktionelle Ver{\"a}nderungen hat. Eine Erh{\"o}hung des intrazellul{\"a}ren cAMP-Spiegels konnte sowohl in vitro als auch in vivo als protektiv herausgestellt werden. In Keratinozytenkultur konnte gezeigt werden, dass eine Erh{\"o}hung des intrazellul{\"a}ren cAMP-Spiegels durch Forskolin/Rolipram oder Isoproterenol in der Lage war, die PV-IgG-induzierten morphologischen Ver{\"a}nderungen, die Dsg3-Depletion, sowie den Adh{\"a}sionsverlust zu blockieren. Weiterhin konnte die Blasenbildung in vivo durch cAMP-Erh{\"o}hung vollst{\"a}ndig verhindert werden. Im Anschluss wurde untersucht, ob die Inkubation mit PV-IgGs einen Einfluss auf die intrazellul{\"a}ren cAMP-Spiegel in vitro hat. Dabei konnte gezeigt werden, dass die Zellen mit einer Erh{\"o}hung der cAMP-Spiegel reagieren, wenn auch in einem geringeren Ausmaß als durch die eingesetzten Mediatoren. Somit kann cAMP als Rettungsmechanismus der Zellen angesehen werden und es wurde daraufhin der Einfluss von cAMP auf die Regeneration von Keratinozyten nach PV-IgG-Inkubation untersucht. Dieser Prozess konnte durch eine cAMP-Erh{\"o}hung verbessert werden und erwies sich als partiell abh{\"a}ngig von PKA. Schlussendlich konnte nachgewiesen werden, dass cAMP in vitro wie in vivo {\"u}ber die Blockade der p38MAPK-Aktivierung protektiv wirkt. Zusammenfassend konnte so ein neuer Einblick in die zellul{\"a}re Antwort von Keratinozyten auf Pemphigus-Autoantik{\"o}rperbindung gewonnen werden. Dieser k{\"o}nnte auch im Hinblick auf die Entwicklung neuer therapeutischer Strategien bei Pemphigus vulgaris wichtig sein.}, subject = {Pemphigus}, language = {de} } @article{VerruaFerranteFilopantietal.2014, author = {Verrua, Elisa and Ferrante, Emanuele and Filopanti, Marcello and Malchiodi, Elena and Sala, Elisa and Giavoli, Claudia and Arosio, Maura and Lania, Andrea Gerardo and Ronchi, Christina Lucia and Mantovani, Giovanna and Beck-Peccoz, Paolo and Spada, Anna}, title = {Reevaluation of Acromegalic Patients in Long-Term Remission according to Newly Proposed Consensus Criteria for Control of Disease}, series = {International Journal of Endocrinology}, journal = {International Journal of Endocrinology}, issn = {1687-8345}, doi = {10.1155/2014/581594}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117790}, pages = {581594}, year = {2014}, abstract = {Acromegaly guidelines updated in 2010 revisited criteria of disease control: if applied, it is likely that a percentage of patients previously considered as cured might present postglucose GH nadir levels not adequately suppressed, with potential implications on management. This study explored GH secretion, as well as hormonal, clinical, neuroradiological, metabolic, and comorbid profile in a cohort of 40 acromegalic patients considered cured on the basis of the previous guidelines after a mean follow-up period of 17.2 years from remission, in order to assess the impact of the current criteria. At the last follow-up visit, in the presence of normal IGF-I concentrations, postglucose GH nadir was over 0.4 mu g/L in 11 patients (Group A) and below 0.4 mu g/L in 29 patients (Group B); moreover, Group A showed higher basal GH levels than Group B, whereas a significant decline of both GH and postglucose GH nadir levels during the follow-up was observed in Group B only. No differences in other evaluated parameters were found. These results seem to suggest that acromegalic patients considered cured on the basis of previous guidelines do not need a more intensive monitoring than patients who met the current criteria of disease control, supporting instead that the cut-off of 0.4 mcg/L might be too low for the currently used GH assay.}, language = {en} } @article{VerghoKneitzRosenwaldetal.2014, author = {Vergho, Daniel and Kneitz, Susanne and Rosenwald, Andreas and Scherer, Charlotte and Spahn, Martin and Burger, Maximilian and Riedmiller, Hubertus and Kneitz, Burkhard}, title = {Combination of expression levels of miR-21 and miR-126 is associated with cancer-specific survival in clear-cell renal cell carcinoma}, doi = {10.1186/1471-2407-14-25}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110061}, year = {2014}, abstract = {Background Renal cell carcinoma (RCC) is marked by high mortality rate. To date, no robust risk stratification by clinical or molecular prognosticators of cancer-specific survival (CSS) has been established for early stages. Transcriptional profiling of small non-coding RNA gene products (miRNAs) seems promising for prognostic stratification. The expression of miR-21 and miR-126 was analysed in a large cohort of RCC patients; a combined risk score (CRS)-model was constructed based on expression levels of both miRNAs. Methods Expression of miR-21 and miR-126 was evaluated by qRT-PCR in tumour and adjacent non-neoplastic tissue in n = 139 clear cell RCC patients. Relation of miR-21 and miR-126 expression with various clinical parameters was assessed. Parameters were analysed by uni- and multivariate COX regression. A factor derived from the z-score resulting from the COX model was determined for both miRs separately and a combined risk score (CRS) was calculated multiplying the relative expression of miR-21 and miR-126 by this factor. The best fitting COX model was selected by relative goodness-of-fit with the Akaike information criterion (AIC). Results RCC with and without miR-21 up- and miR-126 downregulation differed significantly in synchronous metastatic status and CSS. Upregulation of miR-21 and downregulation of miR-126 were independently prognostic. A combined risk score (CRS) based on the expression of both miRs showed high sensitivity and specificity in predicting CSS and prediction was independent from any other clinico-pathological parameter. Association of CRS with CSS was successfully validated in a testing cohort containing patients with high and low risk for progressive disease. Conclusions A combined expression level of miR-21 and miR-126 accurately predicted CSS in two independent RCC cohorts and seems feasible for clinical application in assessing prognosis.}, language = {en} } @article{VerghoKneitzKalogirouetal.2014, author = {Vergho, Daniel Claudius and Kneitz, Susanne and Kalogirou, Charis and Burger, Maximilian and Krebs, Markus and Rosenwald, Andreas and Spahn, Martin and L{\"o}ser, Andreas and Kocot, Arkadius and Riedmiller, Hubertus and Kneitz, Burkhard}, title = {Impact of miR-21, miR-126 and miR-221 as Prognostic Factors of Clear Cell Renal Cell Carcinoma with Tumor Thrombus of the Inferior Vena Cava}, doi = {10.1371/journal.pone.0109877}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-113633}, year = {2014}, abstract = {Clear cell renal cell carcinoma (ccRCC) characterized by a tumor thrombus (TT) extending into the inferior vena cava (IVC) generally indicates poor prognosis. Nevertheless, the risk for tumor recurrence after nephrectomy and thrombectomy varies. An applicable and accurate prediction system to select ccRCC patients with TT of the IVC (ccRCC/TT) at high risk after nephrectomy is urgently needed, but has not been established up to now. To our knowledge, a possible role of microRNAs (miRs) for the development of ccRCC/TT or their impact as prognostic markers in ccRCC/TT has not been explored yet. Therefore, we analyzed the expression of the previously described onco-miRs miR-200c, miR-210, miR-126, miR-221, let-7b, miR-21, miR-143 and miR-141 in a study collective of 74 ccRCC patients. Using the expression profiles of these eight miRs we developed classification systems that accurately differentiate ccRCC from non-cancerous renal tissue and ccRCC/TT from tumors without TT. In the subgroup of 37 ccRCC/TT cases we found that miR-21, miR-126, and miR-221 predicted cancer related death (CRD) accurately and independently from other clinico-pathological features. Furthermore, a combined risk score based on the expression of miR-21, miR-126 and miR-221 was developed and showed high sensitivity and specificity to predict cancer specific survival (CSS) in ccRCC/TT. Using the combined risk score we were able to classify ccRCC/TT patients correctly into high and low risk cases. The risk stratification by the combined risk score (CRS) will benefit from further cohort validation and might have potential for clinical application as a molecular prediction system to identify high- risk ccRCC/TT patients.}, language = {en} } @article{VembarScherfSiegel2014, author = {Vembar, Shruti S. and Scherf, Artur and Siegel, T. Nicolai}, title = {Noncoding RNAs as emerging regulators of Plasmodium falciparum virulence gene expression}, series = {Current Opinion in Microbiology}, volume = {20}, journal = {Current Opinion in Microbiology}, number = {100}, issn = {1369-5274}, doi = {10.1016/j.mib.2014.06.013}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121416}, pages = {153-61}, year = {2014}, abstract = {The eukaryotic unicellular pathogen Plasmodium falciparum tightly regulates gene expression, both during development and in adaptation to dynamic host environments. This regulation is evident in the mutually exclusive expression of members of clonally variant virulence multigene families. While epigenetic regulators have been selectively identified at active or repressed virulence genes, their specific recruitment remains a mystery. In recent years, noncoding RNAs (ncRNAs) have emerged as lynchpins of eukaryotic gene regulation; by binding to epigenetic regulators, they provide target specificity to otherwise non-specific enzyme complexes. Not surprisingly, there is great interest in understanding the role of ncRNA in P. falciparum, in particular, their contribution to the mutually exclusive expression of virulence genes. The current repertoire of P. falciparum ncRNAs includes, but is not limited to, subtelomeric ncRNAs, virulence gene-associated ncRNAs and natural antisense RNA transcripts. Continued improvement in high-throughput sequencing methods is sure to expand this repertoire. Here, we summarize recent advances in P. falciparum ncRNA biology, with an emphasis on ncRNA-mediated epigenetic modes of gene regulation.}, language = {en} } @phdthesis{Varagnolo2014, author = {Varagnolo, Linda}, title = {PRC2 inhibition counteracts the culture-associated loss of engraftment potential of human cord blood-derived hematopoietic stem/progenitor cells}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-108073}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Cord blood hematopoietic stem cells (CB-HSCs) are an outstanding source for the treatment of a variety of malignant and non-malignant disorders. However, the low amount of cells collected per donor is often insufficient for treatment of adult patients. In order to make sufficient numbers of CB-HSCs available for adults, expansion is required. Different approaches were described for HSC expansion, however these approaches are impeded by the loss of engrafting potential during ex vivo culture. Little is known about the underlying molecular mechanisms. Epigenetic mechanisms play essential roles in controlling stem cell potential and fate decisions and epigenetic strategies are considered for HSC expansion. Therefore, this study aimed to characterize global and local epigenotypes during the expansion of human CB-CD34+, a well established CB progenitor cell type, to better understand the molecular mechanisms leading to the culture-associated loss of engrafting potential. Human CB-CD34+ cells were cultured using 2 different cytokine cocktails: the STF cocktail containing SCF, TPO, FGF-1 and the STFIA cocktail, which combines STF with Angiopoietin-like 5 (Angptl5) and Insulin-like growth factor-binding protein 2 (IGFBP2). The latter expands CB-HSCs ex vivo. Subsequently, the NOD-scid gamma (NSG) mouse model was used to study the engraftment potential of expanded cells. Engraftment potential achieved by fresh CB-CD34+ cells was maintained when CB-CD34+ cells were expanded under STFIA but not under STF conditions. To explore global chromatin changes in freshly isolated and expanded CB-CD34+ cells, levels of the activating H3K4me3 and the repressive H3K27me3 histone marks were determined by chromatin flow cytometry and Western blot analyses. For analysis of genome-wide chromatin changes following ex vivo expansion, transcriptome profiling by microarray and chromatin immunoprecipitation combined with deep sequencing (ChIP-seq) were performed. Additionally, local chromatin transitions were monitored by ChIP analyses on promoter regions of developmental and self-renewal factors. On a global level, freshly isolated CD34+ and CD34- cells differed in H3K4me3 and H3K27me3 levels. After 7 days of expansion, CD34+ and CD34- cells adopted similar levels of active and repressive marks. Expanding the cells without IGFBP2 and Angptl5 led to a higher global H3K27me3 level. ChIP-seq analyses revealed a cytokine cocktail-dependent redistribution of H3K27me3 profiles. Chemical inhibition of the H3K27 methyltransferase EZH2 counteracted the culture-associated loss of NSG engraftment potential. Collectively, the data presented in this study revealed that by adding epigeneticly active compounds in the culture media we observed changes on a chromatin level which counteracted the loss of engraftment potential. H3K27me3 rather than H3K4me3 may be critical to establish a specific engraftment supporting transcriptional program. Furthermore, I identified a critical function for the Polycomb repressive complex 2-component EZH2 in the loss of engraftment potential during the in vitro expansion of HPSCs. Taken together this thesis provides a better molecular understanding of chromatin changes upon expansion of CB-HSPCs and opens up new perspectives for epigenetic ex vivo expansion strategies.}, subject = {Epigenetik}, language = {en} } @phdthesis{vanElten2014, author = {van Elten, Elisabeth}, title = {Altersabh{\"a}ngige Vulnerabilit{\"a}t f{\"u}r supraventrikul{\"a}re und ventrikul{\"a}re Arrhythmien bei Popdc2-Nullmutanten}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-105507}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {Im Rahmen der Suche nach genetischen Korrelaten f{\"u}r die Suszeptibilit{\"a}t f{\"u}r Herzrhythmusst{\"o}rungen wurde man auf die Genfamilie mit der sogenannten Popey-Dom{\"a}ne aufmerksam. Ein Gen aus dieser Familie ist das Popdc2-Gen, welches f{\"u}r Transmembranproteine codiert, die m{\"o}glicherweise eine Rolle in der Zell-Adh{\"a}sion und Zell-Interaktion spielen. Diese fanden sich sowohl in adulten M{\"a}usen als auch im Reizleitungssystem des menschlichen Herzens in h{\"o}herer Dichte. Eine systemische elektrophyiologische Charakterisierung der Podpc2-Nullmutanten erbrachte normale AV-{\"U}berleitungseigenschaften und Sinusknotenerholzeit. Im Vergleich zu den Wildtyp-M{\"a}usen zeigten die transgenen Tiere eine erh{\"o}hte ektope Aktivit{\"a}t im Ventrikel nach Katecholamin-Stimulation(z.B. Kammerflimmern), sowie {\"o}fter Vorhofflimmern nach Burstman{\"o}vern. Arrhythmien konnten signifikant h{\"a}ufiger bei Popdc2-Knockout-M{\"a}usen > 9 Monaten nachgewiesen werden, dies k{\"o}nnte auf eine altersabh{\"a}ngige Alteration hindeuten. M{\"o}glicherweise spielt das Popdc2-Gen eine wichtige Rolle in der Pathogenese des pl{\"o}tzlichen Herztods durch ventrikul{\"a}re Arrhythmien.}, subject = {Herzrhythmusst{\"o}rungen}, language = {de} } @article{vandeDonkPalumboJohnsenetal.2014, author = {van de Donk, Niels W. C. J. and Palumbo, Antonio and Johnsen, Hans Erik and Engelhardt, Monika and Gay, Francesca and Gregersen, Henrik and Hajek, Roman and Kleber, Martina and Ludwig, Heinz and Morgan, Gareth and Musto, Pellegrino and Plesner, Torben and Sezer, Orhan and Terpos, Evangelos and Waage, Anders and Zweegman, Sonja and Einsele, Hermann and Sonneveld, Pieter and Lokhorst, Henk M.}, title = {The clinical relevance and management of monoclonal gammopathy of undetermined significance and related disorders: recommendations from the European Myeloma Network}, series = {Haematologica}, volume = {99}, journal = {Haematologica}, number = {6}, issn = {0390-6078}, doi = {10.3324/haematol.2013.100552}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-116050}, pages = {984 - 996}, year = {2014}, abstract = {Monoclonal gammopathy of undetermined significance is one of the most common pre-malignant disorders. IgG and IgA monoclonal gammopathy of undetermined significance are precursor conditions of multiple myeloma; light-chain monoclonal gammopathy of undetermined significance of light-chain multiple myeloma; and IgM monoclonal gammopathy of undetermined significance of Waldenstrom's macroglobulinemia and other lymphoproliferative disorders. Clonal burden, as determined by bone marrow plasma cell percentage or M-protein level, as well as biological characteristics, including heavy chain isotype and light chain production, are helpful in predicting risk of progression of monoclonal gammopathy of undetermined significance to symptomatic disease. Furthermore, alterations in the bone marrow microenvironment of monoclonal gammopathy of undetermined significance patients result in an increased risk of venous and arterial thrombosis, infections, osteoporosis, and bone fractures. In addition, the small clone may occasionally be responsible for severe organ damage through the production of a monoclonal protein that has autoantibody activity or deposits in tissues. These disorders are rare and often require therapy directed at eradication of the underlying plasma cell or lymphoplasmacytic clone. In this review, we provide an overview of the clinical relevance of monoclonal gammopathy of undetermined significance. We also give general recommendations of how to diagnose and manage patients with monoclonal gammopathy of undetermined significance.}, language = {en} } @article{UppalGianatiempoWicinskietal.2014, author = {Uppal, Neha and Gianatiempo, Isabella and Wicinski, Bridget and Schmeidler, James and Heinsen, Helmut and Schmitz, Christoph and Buxbaum, Joseph D. and Hof, Patrick R.}, title = {Neuropathology of the posteroinferior occipitotemporal gyrus in children with autism}, series = {Molecular Autism}, volume = {5}, journal = {Molecular Autism}, number = {17}, doi = {10.1186/2040-2392-5-17}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117275}, year = {2014}, abstract = {Background: While most neuropathologic studies focus on regions involved in behavioral abnormalities in autism, it is also important to identify whether areas that appear functionally normal are devoid of pathologic alterations. In this study we analyzed the posteroinferior occipitotemporal gyrus, an extrastriate area not considered to be affected in autism. This area borders the fusiform gyrus, which is known to exhibit functional and cellular abnormalities in autism. Findings: No studies have implicated posteroinferior occipitotemporal gyrus dysfunction in autism, leading us to hypothesize that neuropathology would not occur in this area. We indeed observed no significant differences in pyramidal neuron number or size in layers III, V, and VI in seven pairs of autism and controls. Conclusions: These findings are consistent with the hypothesis that neuropathology is unique to areas involved in stereotypies and social and emotional behaviors, and support the specificity of the localization of pathology in the fusiform gyrus.}, language = {en} } @phdthesis{Ullrich2014, author = {Ullrich, Melanie}, title = {Identification of SPRED2 as a Novel Regulator of Hypothalamic-Pituitary-Adrenal Axis Activity and of Body Homeostasis}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-107355}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {SPRED proteins are inhibitors of the Ras/ERK/MAPK signaling pathway, an evolutionary highly conserved and very widespread signaling cascade regulating cell proliferation, differentiation, and growth. To elucidate physiological consequences of SPRED2 deficiency, SPRED2 KO mice were generated by a gene trap approach. An initial phenotypical characterization of KO mice aged up to five months identified SPRED2 as a regulator of chondrocyte differentiation and bone growth. Here, the loss of SPRED2 leads to an augmented FGFR-dependent ERK activity, which in turn causes hypochondroplasia-like dwarfism. However, long term observations of older KO mice revealed a generally bad state of health and manifold further symptoms, including excessive grooming associated with severe self-inflicted wounds, an abnormally high water uptake, clear morphological signs of kidney deterioration, and a reduced survival due to sudden death. Based on these observations, the aim of this study was to discover an elicitor of this complex and versatile phenotype. The observed kidney degeneration in our SPRED2 KO mice was ascribed to hydronephrosis characterized by severe kidney atrophy and apoptosis of renal tubular cells. Kidney damage prompted us to analyze drinking behavior and routine serum parameters. Despite polydipsia, which was characterized by a nearly doubled daily water uptake, the significantly elevated Na+ and Cl- levels and the resulting serum hyperosmolality could not be compensated in SPRED2 KOs. Since salt and water balance is primarily under hormonal control of aldosterone and AVP, we analyzed both hormone levels. While serum AVP was similar in WTs and KOs, even after experimental water deprivation and an extreme loss of body fluid, serum aldosterone was doubled in SPRED2 KO mice. Systematic investigation of contributing upstream hormone axes demonstrated that hyperaldosteronism developed independently of an overactivated Renin-Angiotensin system as indicated by halved serum Ang II levels in KO mice. However, aldosterone synthase expression in the adrenal gland was substantially augmented. Serum corticosterone, which is like aldosterone released from the adrenal cortex, was more than doubled in SPRED2 KOs, too. Similar to corticosterone, the production of aldosterone is at least in part under control of pituitary ACTH, which is further regulated by upstream hypothalamic CRH release. In fact, stress hormone secretion from this complete hypothalamic-pituitary-adrenal axis was upregulated because serum ACTH, the mid acting pituitary hormone, and hypothalamic CRH, the upstream hormonal inductor of HPA axis activity, were also elevated by 30\% in SPRED2 KO mice. This was accompanied by an upregulated ERK activity in paraventricular nucleus-containing hypothalamic brain regions and by augmented hypothalamic CRH mRNA levels in our SPRED2 KO mice. In vitro studies using the hypothalamic cell line mHypoE-44 further demonstrated that both SPRED1 and SPRED2 were able to downregulate CRH promoter activity, CRH secretion, and Ets factor-dependent CRH transcription. This was in line with the presence of various Ets factor binding sites in the CRH promoter region, especially for Ets1. Thus, this study shows for the first time that SPRED2-dependent inhibition of Ras/ERK/MAPK signaling by suppression of ERK activity leads to a downregulation of Ets1 factor-dependent transcription, which further results in inhibition of CRH promoter activity, CRH transcription, and CRH release from the hypothalamus. The consecutive hyperactivity of the complete HPA axis in our SPRED2 KO mice reflects an elevated endogenous stress response becoming manifest by excessive grooming behavior and self-inflicted skin lesions on the one hand; on the other hand, in combination with elevated aldosterone synthase expression, this upregulated HPA hormone release explains hyperaldosteronism and the associated salt and water imbalances. Both hyperaldosteronism and polydipsia very likely contribute further to the observed kidney damage. Taken together, this study initially demonstrates that SPRED2 is essential for the appropriate regulation of HPA axis activity and of body homeostasis. To further enlighten and compare consequences of SPRED2 deficiency in mice and particularly in humans, two follow-up studies investigating SPRED2 function especially in heart and brain, and a genetic screen to identify human SPRED2 loss-of-function mutations are already in progress.}, subject = {Renin-Angiotensin-System}, language = {en} } @article{UllmannSchmittRothetal.2014, author = {Ullmann, Tobias and Schmitt, Andreas and Roth, Achim and Duffe, Jason and Dech, Stefan and Hubberten, Hans-Wolfgang and Baumhauer, Roland}, title = {Land Cover Characterization and Classification of Arctic Tundra Environments by Means of Polarized Synthetic Aperture X- and C-Band Radar (PolSAR) and Landsat 8 Multispectral Imagery — Richards Island, Canada}, doi = {10.3390/rs6098565}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-113303}, year = {2014}, abstract = {In this work the potential of polarimetric Synthetic Aperture Radar (PolSAR) data of dual-polarized TerraSAR-X (HH/VV) and quad-polarized Radarsat-2 was examined in combination with multispectral Landsat 8 data for unsupervised and supervised classification of tundra land cover types of Richards Island, Canada. The classification accuracies as well as the backscatter and reflectance characteristics were analyzed using reference data collected during three field work campaigns and include in situ data and high resolution airborne photography. The optical data offered an acceptable initial accuracy for the land cover classification. The overall accuracy was increased by the combination of PolSAR and optical data and was up to 71\% for unsupervised (Landsat 8 and TerraSAR-X) and up to 87\% for supervised classification (Landsat 8 and Radarsat-2) for five tundra land cover types. The decomposition features of the dual and quad-polarized data showed a high sensitivity for the non-vegetated substrate (dominant surface scattering) and wetland vegetation (dominant double bounce and volume scattering). These classes had high potential to be automatically detected with unsupervised classification techniques.}, language = {en} } @phdthesis{Tzschichholz2014, author = {Tzschichholz, Tristan}, title = {Relative pose estimation of known rigid objects using a novel approach to high-level PMD-/CCD- sensor data fusion with regard to applications in space}, isbn = {978-3-923959-95-2}, issn = {1868-7474}, doi = {10.25972/OPUS-10391}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-103918}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2014}, abstract = {In this work, a novel method for estimating the relative pose of a known object is presented, which relies on an application-specific data fusion process. A PMD-sensor in conjunction with a CCD-sensor is used to perform the pose estimation. Furthermore, the work provides a method for extending the measurement range of the PMD sensor along with the necessary calibration methodology. Finally, extensive measurements on a very accurate Rendezvous and Docking testbed are made to evaluate the performance, what includes a detailed discussion of lighting conditions.}, subject = {Bildverarbeitung}, language = {en} } @article{TvingstedtMalinkiewiczBaumannetal.2014, author = {Tvingstedt, Kristofer and Malinkiewicz, Olga and Baumann, Andreas and Deibel, Carsten and Snaith, Henry J. and Dyakonov, Vladimir and Bolink, Henk J.}, title = {Radiative efficiency of lead iodide based perovskite solar cells}, series = {Scientific Reports}, volume = {4}, journal = {Scientific Reports}, doi = {10.1038/srep06071}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119360}, pages = {6071}, year = {2014}, abstract = {The maximum efficiency of any solar cell can be evaluated in terms of its corresponding ability to emit light. We herein determine the important figure of merit of radiative efficiency for Methylammonium Lead Iodide perovskite solar cells and, to put in context, relate it to an organic photovoltaic (OPV) model device. We evaluate the reciprocity relation between electroluminescence and photovoltaic quantum efficiency and conclude that the emission from the perovskite devices is dominated by a sharp band-to-band transition that has a radiative efficiency much higher than that of an average OPV device. As a consequence, the perovskite have the benefit of retaining an open circuit voltage ~0.14 V closer to its radiative limit than the OPV cell. Additionally, and in contrast to OPVs, we show that the photoluminescence of the perovskite solar cell is substantially quenched under short circuit conditions in accordance with how an ideal photovoltaic cell should operate.}, language = {en} } @article{TulodzieckiHerzigGrafe2014, author = {Tulodziecki, Gerhard and Herzig, Bardo and Grafe, Silke}, title = {Medienp{\"a}dagogische Forschung als gestaltungsorientierte Bildungsforschung vor dem Hintergrund praxis- und theorierelevanter Forschungsans{\"a}tze in der Erziehungswissenschaft.}, series = {MedienP{\"a}dagogik, Zeitschrift f{\"u}r Theorie und Praxis der Medienbildung}, journal = {MedienP{\"a}dagogik, Zeitschrift f{\"u}r Theorie und Praxis der Medienbildung}, issn = {1424-3636}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-120284}, year = {2014}, abstract = {In der Diskussion um eine gegenstandsad{\"a}quate Forschungsmethodik f{\"u}r die P{\"a}dagogik bzw. Erziehungswissenschaft stellt deren Bedeutung f{\"u}r eine theoriebasierte Verbesserung der Erziehungs- und Bildungspraxis ein wichtiges Thema dar. Da die Medienp{\"a}dagogik als erziehungswissenschaftliche Teildisziplin zu verstehen ist, gelten f{\"u}r die medienp{\"a}dagogische Forschung gleichermassen die Fragen nach ihrem Stellenwert f{\"u}r die Weiterentwicklung medienp{\"a}dagogischer Praxis und f{\"u}r ihre theoretische Fundierung. Vor diesem Hintergrund werden in unserem Beitrag verschiedene erziehungswissenschaftliche Forschungsans{\"a}tze mit medienp{\"a}dagogischen Bez{\"u}gen skizziert, die in besonderer Weise auf eine theoriebasierte Verbesserung der Erziehungs- und Bildungspraxis zielen: die Aktionsforschung, die praxis- und theorieorientierte Entwicklung und Evaluation von Konzepten f{\"u}r p{\"a}dagogisches Handeln, der Design-Based Research-Ansatz sowie das Konzept der entwicklungsorientierten Bildungsforschung. In einer Zusammenschau werden zehn Merkmale entsprechender Forschungsans{\"a}tze aufgezeigt und im Hinblick auf eine gestaltungsorientierte medienp{\"a}dagogische Forschung kommentiert: Gestaltung als Bestandteil des Forschungsprozesses und der Wissensgenerierung, Praxisrelevanz und Praxistauglichkeit, Reflexion von Wertbez{\"u}gen, Theoriefundierung und Theorieentwicklung, empirische Fundierung und Kontrolle, Forschung als zirkul{\"a}rer und iterativer Prozess, Zusammenwirken von Praxis und Wissenschaft, Forschung als Beitrag zur Professionalisierung, Verkn{\"u}pfung unterschiedlicher Forschungsmethoden, Diskussion von G{\"u}tekriterien und Qualit{\"a}tsstandards.}, language = {de} }