@phdthesis{Hugo2023,
  author    = {Hugo, Julian},
  title     = {'Signal-close-to-noise' calcium activity reflects neuronal excitability},
  doi       = {10.25972/OPUS-29260},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-292605},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {Chronic pain conditions are a major reason for the utilization of the health care system. Inflammatory pain states can persist facilitated by peripheral sensitization of nociceptors. The voltage-gated sodium channel 1.9 (NaV1.9) is an important regulator of neuronal excitability and is involved in inflammation-induced pain hypersensitivity. Recently, oxidized 1-palmitoyl-2-arachidonoyl-sn-glycerol-3-phosphatidylcholine (OxPAPC) was identified as a mediator of acute inflammatory pain and persistent hyperalgesia, suggesting an involvement in proalgesic cascades and peripheral sensitization. Peripheral sensitization implies an increase in neuronal excitability. This thesis aims to characterize spontaneous calcium activity in neuronal compartments as a proxy to investigate neuronal excitability, making use of the computational tool Neural Activity Cubic (NA3). NA3 allows automated calcium activity event detection of signal-close-to-noise calcium activity and evaluation of neuronal activity states. Additionally, the influence of OxPAPC and NaV1.9 on the excitability of murine dorsal root ganglion (DRG) neurons and the effect of OxPAPC on the response of DRG neurons towards other inflammatory mediators (prostaglandin E2, histamine, and bradykinin) is investigated. Using calcium imaging, the presence of spontaneous calcium activity in murine DRG neurons was established. NA3 was used to quantify this spontaneous calcium activity, which revealed decreased activity counts in axons and somata of NaV1.9 knockout (KO) neurons compared to wildtype (WT). Incubation of WT DRG neurons with OxPAPC before calcium imaging did not show altered activity counts compared to controls. OxPAPC incubation also did not modify the response of DRG neurons treated with inflammatory mediators. However, the variance ratio computed by NA3 conclusively allowed to determine neuronal activity states. In conclusion, my findings indicate an important function of NaV1.9 in determining the neuronal excitability of DRG neurons in resting states. OxPAPC exposition does not influence neuronal excitability nor sensitizes neurons for other inflammatory mediators. This evidence reduces the primary mechanism of OxPAPC-induced hyperalgesia to acute effects. Importantly, it was possible to establish an approach for unbiased excitability quantification of DRG neurons by calcium activity event detection and calcium trace variance analysis by NA3. It was possible to show that signal-close-to-noise calcium activity reflects neuronal excitability states.},
  subject      = {Entz{\"u}ndung},
  language  = {en}
}
@phdthesis{Gregor2008,
  author    = {Gregor, Thomas},
  title     = {{0,1}-Matrices with Rectangular Rule},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-28389},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2008},
  abstract  = {The incidence matrices of many combinatorial structures satisfy the so called rectangular rule, i.e., the scalar product of any two lines of the matrix is at most 1. We study a class of matrices with rectangular rule, the regular block matrices. Some regular block matrices are submatrices of incidence matrices of finite projective planes. Necessary and sufficient conditions are given for regular block matrices, to be submatrices of projective planes. Moreover, regular block matrices are related to another combinatorial structure, the symmetric configurations. In particular, it turns out, that we may conclude the existence of several symmetric configurations from the existence of a projective plane, using this relationship.},
  subject      = {Projektive Ebene},
  language  = {en}
}
@phdthesis{Schumm2008,
  author    = {Schumm, Marcel},
  title     = {ZnO-based semiconductors studied by Raman spectroscopy: semimagnetic alloying, doping, and nanostructures},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-37045},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2008},
  abstract  = {ZnO-based semiconductors were studied by Raman spectroscopy and complementary methods (e.g. XRD, EPS) with focus on semimagnetic alloying with transition metal ions, doping (especially p-type doping with nitrogen as acceptor), and nanostructures (especially wet-chemically synthesized nanoparticles).},
  subject      = {Wide-gap-Halbleiter},
  language  = {en}
}
@phdthesis{Wagner2020,
  author    = {Wagner, Leonard},
  title     = {Zinc homeostasis in megakaryocytes},
  doi       = {10.25972/OPUS-21452},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-214526},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2020},
  abstract  = {Zinc is an essential trace element for all living organisms. In mammals, including humans and mice, it is required for normal growth, development, hematopoiesis and immune defense. This thesis investigates the influence of zinc on the development of megakaryocytes (MKs), the cells responsible for bone marrow-derived platelet production. Furthermore, a detailed analysis of the expression of zinc import and export transporters (Slc39a/Slc30a genes) is carried out, firstly over the course of MK differentiation and secondly dependent on extracellular zinc.},
  subject      = {Zink},
  language  = {en}
}
@phdthesis{Spenst2017,
  author    = {Spenst, Peter},
  title     = {Xylylene Bridged Perylene Bisimide Cyclophanes and Macrocycles},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-139015},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {This work is concerned with the syntheses and photophysical properties of para-xylylene bridged macrocycles nPBI with ring sizes from two to nine PBI units, as well as the complexation of polycyclic aromatic guest compounds. With a reduced but substantial fluorescence quantum yield of 21\% (in CHCl3) the free host 2PBI(4-tBu)4 can be used as a dual fluorescence probe. Upon encapsulation of rather electron-poor guests the fluorescence quenching interactions between the chromophores are prevented, leading to a significant fluorescence enhancement to > 90\% ("turn-on"). On the other hand, the addition of electron-rich guest molecules induces an electron transfer from the guest to the electron-poor PBI chromophores and thus quenches the fluorescence entirely ("turn-off"). The photophysical properties of the host-guest complexes were studied by transient absorption spectroscopy. These measurements revealed that the charge transfer between guest and 2PBI(4-tBu)4 occurs in the "normal region" of the Marcus-parabola with the fastest charge separation rate for perylene. In contrast, the charge recombination back to the PBI ground state lies far in the "inverted region" of the Marcus-parabola. Beside complexation of planar aromatic hydrocarbons into the cavity of the cyclophanes an encapsulation of fullerene into the cyclic trimer 3PBI(4-tBu)4 was observed. 3PBI(4-tBu)4 provides a tube-like structure in which the PBI subunits represent the walls of those tubes. The cavity has the optimal size for hosting fullerenes, with C70 fitting better than C60 and a binding constant that is higher by a factor of 10. TA spectroscopy in toluene that was performed on the C60@3PBI(4-tBu)4 complex revealed two energy transfer processes. The first one comes from the excited PBI to the fullerene, which subsequently populates the triplet state. From the fullerene triplet state a second energy transfer occurs back to the PBI to generate the PBI triplet state. In all cycles that were studied by TA spectroscopy, symmetry-breaking charge separation (SB-CS) was observed in dichloromethane. This process is fastest within the PBI cyclophane 2PBI(4-tBu)4 and slows down for larger cycles, suggesting that the charge separation takes place through space and not through bonds. The charges then recombine to the PBI triplet state via a radical pair intersystem crossing (RP-ISC) mechanism, which could be used to generate singlet oxygen in yields of ~20\%. By changing the solvent to toluene an intramolecular folding of the even-numbered larger cycles was observed that quenches the fluorescence and increases the 0-1 transition band in the absorption spectra. Force field calculations of 4PBI(4-tBu)4 suggested a folding into pairs of dimers, which explains the remarkable odd-even effect with respect to the number of connected PBI chromophores and the resulting alternation in the absorption and fluorescence properties. Thus, the even-numbered macrocycles can fold in a way that all chromophores are in a paired arrangement, while the odd-numbered cycles have open conformations (3PBI(4-tBu)4, 5PBI(4-tBu)4, 7PBI(4-tBu)4) or at least additional unpaired PBI unit (9PBI(4-tBu)4). With these experiments we could for the first time give insights in the interactions between cyclic PBI hosts and aromatic guest molecules. Associated with the encapsulation of guest molecules a variety of possible applications can be envisioned, like fluorescence sensing, chiral recognition and photodynamic therapy by singlet oxygen generation. Particularly, these macrocycles provide photophysical relaxation pathways of PBIs, like charge separation and recombination and triplet state formation that are hardly feasible in monomeric PBI dyes. Furthermore, diverse compound specific features were found, like the odd-even effect in the folding process or the transition of superficial nanostructures of the tetrameric cycle influenced by the AFM tip. The comprehensive properties of these macrocycles provide the basis for further oncoming studies and can serve as an inspiration for the synthesis of new macrocyclic compounds.},
  subject      = {Supramolekulare Chemie},
  language  = {en}
}
@phdthesis{GraetzgebDittmann2022,
  author    = {Graetz [geb. Dittmann], Jonas},
  title     = {X-Ray Dark-Field Tensor Tomography : a Hitchhiker's Guide to Tomographic Reconstruction and Talbot Imaging},
  doi       = {10.25972/OPUS-28143},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-281437},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {X-ray dark-field imaging allows to resolve the conflict between the demand for centimeter scaled fields of view and the spatial resolution required for the characterization of fibrous materials structured on the micrometer scale. It draws on the ability of X-ray Talbot interferometers to provide full field images of a sample's ultra small angle scattering properties, bridging a gap of multiple orders of magnitude between the imaging resolution and the contrasted structure scale. The correspondence between shape anisotropy and oriented scattering thereby allows to infer orientations within a sample's microstructure below the imaging resolution. First demonstrations have shown the general feasibility of doing so in a tomographic fashion, based on various heuristic signal models and reconstruction approaches. Here, both a verified model of the signal anisotropy and a reconstruction technique practicable for general imaging geometries and large tensor valued volumes is developed based on in-depth reviews of dark-field imaging and tomographic reconstruction techniques. To this end, a wide interdisciplinary field of imaging and reconstruction methodologies is revisited. To begin with, a novel introduction to the mathematical description of perspective projections provides essential insights into the relations between the tangible real space properties of cone beam imaging geometries and their technically relevant description in terms of homogeneous coordinates and projection matrices. Based on these fundamentals, a novel auto-calibration approach is developed, facilitating the practical determination of perspective imaging geometries with minimal experimental constraints. A corresponding generalized formulation of the widely employed Feldkamp algorithm is given, allowing fast and flexible volume reconstructions from arbitrary tomographic imaging geometries. Iterative reconstruction techniques are likewise introduced for general projection geometries, with a particular focus on the efficient evaluation of the forward problem associated with tomographic imaging. A highly performant 3D generalization of Joseph's classic linearly interpolating ray casting algorithm is developed to this end and compared to typical alternatives. With regard to the anisotropic imaging modality required for tensor tomography, X-ray dark-field contrast is extensively reviewed. Previous literature is brought into a joint context and nomenclature and supplemented by original work completing a consistent picture of the theory of dark-field origination. Key results are explicitly validated by experimental data with a special focus on tomography as well as the properties of anisotropic fibrous scatterers. In order to address the pronounced susceptibility of interferometric images to subtle mechanical imprecisions, an efficient optimization based evaluation strategy for the raw data provided by Talbot interferometers is developed. Finally, the fitness of linear tensor models with respect to the derived anisotropy properties of dark-field contrast is evaluated, and an iterative scheme for the reconstruction of tensor valued volumes from projection images is proposed. The derived methods are efficiently implemented and applied to fiber reinforced plastic samples, imaged at the ID19 imaging beamline of the European Synchrotron Radiation Facility. The results represent unprecedented demonstrations of X-ray dark-field tensor tomography at a field of view of 3-4cm, revealing local fiber orientations of both complex shaped and low-contrast samples at a spatial resolution of 0.1mm in 3D. The results are confirmed by an independent micro CT based fiber analysis.},
  subject      = {Dreidimensionale Rekonstruktion},
  language  = {en}
}
@phdthesis{Heck2005,
  author    = {Heck, Klaus},
  title     = {Wireless LAN performance studies in the context of 4G networks},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-14896},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2005},
  abstract  = {Wireless communication is nothing new. The first data transmissions based on electromagnetic waves have been successfully performed at the end of the 19th century. However, it took almost another century until the technology was ripe for mass market. The first mobile communication systems based on the transmission of digital data were introduced in the late 1980s. Within just a couple of years they have caused a revolution in the way people communicate. The number of cellular phones started to outnumber the fixed telephone lines in many countries and is still rising. New technologies in 3G systems, such as UMTS, allow higher data rates and support various kinds of multimedia services. Nevertheless, the end of the road in wireless communication is far from being reached. In the near future, the Internet and cellular phone systems are expected to be integrated to a new form of wireless system. Bandwidth requirements for a rich set of wireless services, e.g.\ video telephony, video streaming, online gaming, will be easily met. The transmission of voice data will just be another IP based service. On the other hand, building such a system is by far not an easy task. The problems in the development of the UMTS system showed the high complexity of wireless systems with support for bandwidth-hungry, IP-based services. But the technological challenges are just one difficulty. Telecommunication systems are planned on a world-wide basis, such that standard bodies, governments, institutions, hardware vendors, and service providers have to find agreements and compromises on a number of different topics. In this work, we provide the reader with a discussion of many of the topics involved in the planning of a Wireless LAN system that is capable of being integrated into the 4th generation mobile networks (4G) that is being discussed nowadays. Therefore, it has to be able to cope with interactive voice and video traffic while still offering high data rates for best effort traffic. Let us assume a scenario where a huge office complex is completely covered with Wireless LAN access points. Different antenna systems are applied in order to reduce the number of access points that are needed on the one hand, while optimizing the coverage on the other. No additional infrastructure is implemented. Our goal is to evaluate whether the Wireless LAN technology is capable of dealing with the various demands of such a scenario. First, each single access point has to be capable of supporting best-effort and Quality of Service (QoS) demanding applications simultaneously. The IT infrastructure in our scenario consists solely of Wireless LAN, such that it has to allow users surfing the Web, while others are involved in voice calls or video conferences. Then, there is the problem of overlapping cells. Users attached to one access point produce interference for others. However, the QoS support has to be maintained, which is not an easy task. Finally, there are nomadic users, which roam from one Wireless LAN cell to another even during a voice call. There are mechanisms in the standard that allow for mobility, but their capabilities for QoS support are yet to be studied. This shows the large number of unresolved issues when it comes to Wireless LAN in the context of 4G networks. In this work we want to tackle some of the problems.},
  subject      = {Drahtloses lokales Netz},
  language  = {en}
}
@phdthesis{Saal2017,
  author    = {Saal, Lena},
  title     = {Whole transcriptome profiling of compartmentalized motoneurons},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-140006},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Spinal muscular atrophy and amyotrophic lateral sclerosis are the two most common devastating motoneuron diseases. The mechanisms leading to motoneuron degeneration are not resolved so far, although different hypotheses have been built on existing data. One possible mechanism is disturbed axonal transport of RNAs in the affected motoneurons. The underlying question of this study was therefore to characterize changes in transcript levels of distinct RNAs in cell culture models of spinal muscular atrophy and amyotrophic lateral sclerosis, especially in the axonal compartment of primary motoneurons. To investigate this in detail we first established compartmentalized cultures of Primary mouse motoneurons. Subsequently, total RNA of both compartments was extracted separately and either linearly amplified and subjected to microarray profiling or whole transcriptome amplification followed by RNA-Sequencing was performed. To make the whole transcriptome amplification method suitable for compartmentalized cultures, we adapted a double-random priming strategy. First, we applied this method for initial optimization onto serial dilutions of spinal cord RNA and later on to the compartmentalized motoneurons. Analysis of the data obtained from wildtype cultures already revealed interesting results. First, the RNA composition of axons turned out to be highly similar to the somatodendritic compartment. Second, axons seem to be particularly enriched for transcripts related to protein synthesis and energy production. In a next step we repeated the experiments by using knockdown cultures. The proteins depleted hereby are Smn, Tdp-43 and hnRNP R. Another experiment was performed by knocking down the non-coding RNA 7SK, the main interacting RNA of hnRNP R. Depletion of Smn led to a vast number of deregulated transcripts in the axonal and somatodendritic compartment. Transcripts downregulated in the axons upon Smn depletion were especially enriched for GOterms related to RNA processing and encode proteins located in neuron projections including axons and growth cones. Strinkingly, among the upregulated transcripts in the somatodendritic compartment we mainly found MHC class I transcripts suggesting a potential neuroprotective role. In contrast, although knockdown of Tdp-43 also revealed a large number of downregulated transcripts in the axonal compartment, these transcripts were mainly associated with functions in transcriptional regulation and RNA splicing. For the hnRNP R knockdown our results were again different. Here, we observed downregulated transcripts in the axonal compartment mainly associated with regulation of synaptic transmission and nerve impulses. Interestingly, a comparison between deregulated transcripts in the axonal compartment of both hnRNP R and 7SK knockdown presented a significant overlap of several transcripts suggesting some common mechanism for both knockdowns. Thus, our data indicate that a loss of disease-associated proteins involved in axonal RNA transport causes distinct transcriptome alterations in motor axons.},
  subject      = {Axon},
  language  = {en}
}
@phdthesis{Roemer2014,
  author    = {R{\"o}mer, Daniela},
  title     = {Where and how to build? Influence of social and environmental cues on nest building behavior in leaf-cutting ants},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-109409},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {This thesis explores the influence of social and environmental cues on the nest building behavior of leaf-cutting ants. Especially, the investigations are aimed at evaluating the mechanisms of nest building and how the nest environment can spatially guide building responses that lead to an adaptive nest architecture. The emergence of nest chambers in the nest of the leaf-cutting ant Acromyrmex lundi were evaluated. Rather than excavating nest chambers in advance, at places where workers encounter suitable environmental conditions for brood and fungus rearing, these items have to be present at a site. When presented in the laboratory with a choice between two otherwise identical digging sites, offering suitable environmental conditions, but one containing brood, the workers displayed a higher excavation activity at the site where they encountered the putative content of a chamber. The shape of the excavated cavity was also more round and chamber-like. It is concluded that leaf-cutting ants respond to social cues during nest building. Excavation is a costly process and colonies have to spend a part of their energy stores on nest building, so that regulatory responses for the control of nest excavation are expected to occur. Worker density at the beginning of the digging process influenced digging activity while the presence of in-nest stores did not. Stored brood and fungus did however influence the architecture of the excavated nest, leading to the excavation of larger chambers and smaller tunnels. While self-organized mechanisms appear to be involved in the nest building process, the social cues of the ants' environment during building clearly influence the nest architecture and lead to an adjustment of the nest size to the current space needs of the colony. Workers secondarily regulated nest size by the opportunistic refilling of unused space with excavated soil pellets. As the ants should provide suitable conditions for brood and fungus rearing, they should show a behavioral response to CO2 concentrations, as the gas is known to hinder fungus respiration. Workers of A. lundi did indeed avoid high CO2-levels for fungus rearing but actually preferred CO2-values in the range encountered close to the soil surface, where this species excavates their nests. However, different CO2-levels did not affect their excavation behavior. While fungus chambers make up part of a leaf-cutting ant nest, most leaf-cutting ants of the genus Atta also spent part of the colony's energy on excavating large, voluminous chambers for waste disposal, rather than scattering the material aboveground. It is expected that leaf-cutting ants also show environmental preferences for waste management. In experiments Atta laevigata workers preferred deposition in a warm and dry environment and showed no preference for specific CO2-levels. The continued accumulation of waste particles in a waste chamber seems to be based on the use of volatiles. These originate from the waste itself, and seem to be used as an orientation cue by workers relocating the material. The ensuing large accumulation of waste at one site should result in the emergence of more voluminous chambers for waste disposal.},
  subject      = {Nestbau},
  language  = {en}
}
@phdthesis{Karch2002,
  author    = {Karch, Oliver},
  title     = {Where am I? - Indoor localization based on range measurements},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-8442},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2002},
  abstract  = {Nowadays, robotics plays an important role in increasing fields of application. There exist many environments or situations where mobile robots instead of human beings are used, since the tasks are too hazardous, uncomfortable, repetitive, or costly for humans to perform. The autonomy and the mobility of the robot are often essential for a good solution of these problems. Thus, such a robot should at least be able to answer the question "Where am I?". This thesis investigates the problem of self-localizing a robot in an indoor environment using range measurements. That is, a robot equipped with a range sensor wakes up inside a building and has to determine its position using only its sensor data and a map of its environment. We examine this problem from an idealizing point of view (reducing it into a pure geometric one) and further investigate a method of Guibas, Motwani, and Raghavan from the field of computational geometry to solving it. Here, so-called visibility skeletons, which can be seen as coarsened representations of visibility polygons, play a decisive role. In the major part of this thesis we analyze the structures and the occurring complexities in the framework of this scheme. It turns out that the main source of complication are so-called overlapping embeddings of skeletons into the map polygon, for which we derive some restrictive visibility constraints. Based on these results we are able to improve one of the occurring complexity bounds in the sense that we can formulate it with respect to the number of reflex vertices instead of the total number of map vertices. This also affects the worst-case bound on the preprocessing complexity of the method. The second part of this thesis compares the previous idealizing assumptions with the properties of real-world environments and discusses the occurring problems. In order to circumvent these problems, we use the concept of distance functions, which model the resemblance between the sensor data and the map, and appropriately adapt the above method to the needs of realistic scenarios. In particular, we introduce a distance function, namely the polar coordinate metric, which seems to be well suited to the localization problem. Finally, we present the RoLoPro software where most of the discussed algorithms are implemented (including the polar coordinate metric).},
  subject      = {Autonomer Roboter},
  language  = {en}
}
@phdthesis{Epstude2005,
  author    = {Epstude, Kai},
  title     = {What you get is what you see? Comparisons influence the social induction of affect},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-14961},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2005},
  abstract  = {The present research is concerned with the topic of socially induced affect. In previous research the focus was mainly on affective convergence. A prominent topic in that context was "emotional contagion" (Hatfield, Cacioppo, \& Rapson, 1994). Affective divergence has been also been found. However, its influence on the theoretical debate remained weak. Besides research on emotions also social comparison research attended to the topic. In order to explain affective divergence and convergence an integrative model based on social comparison processes is proposed here. Based on the selective accessibility model (Mussweiler, 2003) it is assumed that affective convergence can be seen as assimilation to a comparison standard (the observed model). Therefore, the basic assumption is that a comparison between an observer and the model takes place. Affective divergence corresponds to an affective contrast from that standard. Which of these two phenomena occurs depends on the type of comparison processes that took place. Six experiments were conducted. In Experiment 1 it was shown that comparisons intensify the social induction of affect. The influence of the comparison focus was studied in Experiments 2 and 3. If the perceiver searches for similarities between the self and the model, affective convergence occurs. If differences are searched for, affective divergence is found. The latter is mainly found under special circumstances, e.g. if the model belongs to another social group (Experiment 3). In Experiment 1-3 it was shown comparisons influence the social induction of affect. In Experiment 4-6 the underlying processes were explored. The selective accessibility model (Mussweiler, 2003) attributes a central role to the selective activation of self-knowledge in order to explain judgmental assimilation and contrast. In Experiments 4 and 5 the role of the self was explored more thoroughly. Evidence for socially induced affect (affective convergence) has only been found when the self has been previously activated. When the self was not activated no such effect was found. The assumption that the activation of specific self-knowledge is the basis for socially induced affect was tested in Experiment 5. Results supported the assumption. The present experiments give rise to the assumption that social comparisons are a key element in the social induction of affect. Affective convergence and divergence are explained and processes for the affect induction are defined. The findings also have implications for research on automatic behaviour and especially to explain automatic contrast. In addition implications for social comparison research can be derived.},
  language  = {en}
}
@phdthesis{Schmitt2022,
  author    = {Schmitt, Nadine J. B.},
  title     = {What is integrity and how do we use it? - Enhancing the validity of integrity by reviewing integrity tests, expanding the nomological network, and reducing faking},
  doi       = {10.25972/OPUS-26046},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-260468},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {This dissertation focuses on the construct and criterion validity of integrity tests and aims to enhance both. To accomplish this goal, three approaches were adopted: First, an overview and systematic comparison of integrity tests was conducted with reference to the construction and application of the tests. Second, the nomological network of integrity tests was expanded with reference to honesty-humility and organizational citizenship behavior at their factor and facet level. Third, two promising methods to reduce faking on integrity tests were tested: the double rating method (Hui, 2001) and the indirect questioning technique. In line with previous research, the results of the overview and comparison of integrity measures confirmed that integrity tests are multidimensional and heterogenous. A clear definition of integrity is urgently needed. The personality trait of honesty-humility and its facets of fairness, and modesty revealed the most significant relationships to integrity. Moreover, organizational citizenship behavior and its facets of altruism, conscientiousness, and sportsmanship were found to significantly relate to integrity. Furthermore, integrity tests were able not only to predict organizational citizenship behavior but also to incrementally predict job performance and organizational citizenship behavior beyond the factor and facet level of the personality traits of conscientiousness and honesty-humility. In contrast to the indirect questioning technique, the double rating method, which includes an other rating and a self rating, was shown to be able to significantly reduce faking on integrity tests in an anonymous survey setting. This dissertation makes an important contribution to better explain the construct and nomological network of integrity, provide a more detailed view on integrity tests and their protection against faking, and expand the predictive and incremental validity of these tests. The implications for future research and practice are further discussed.},
  subject      = {Integrit{\"a}t},
  language  = {en}
}
@phdthesis{Klotzky2018,
  author    = {Klotzky, Jens},
  title     = {Well-posedness of a fluid-particle interaction model},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-169009},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2018},
  abstract  = {This thesis considers a model of a scalar partial differential equation in the presence of a singular source term, modeling the interaction between an inviscid fluid represented by the Burgers equation and an arbitrary, finite amount of particles moving inside the fluid, each one acting as a point-wise drag force with a particle related friction constant. \begin{align*} \partial_t u + \partial_x (u^2/2) \&= \sum_{i \in N(t)} \lambda_i \Big(h_i'(t)-u(t,h_i(t)\Big)\delta(x-h_i(t)) \end{align*} The model was introduced for the case of a single particle by Lagouti{\`e}re, Seguin and Takahashi, is a first step towards a better understanding of interaction between fluids and solids on the level of partial differential equations and has the unique property of considering entropy admissible solutions and the interaction with shockwaves. The model is extended to an arbitrary, finite number of particles and interactions like merging, splitting and crossing of particle paths are considered. The theory of entropy admissibility is revisited for the cases of interfaces and discontinuous flux conservation laws, existing results are summarized and compared, and adapted for regions of particle interactions. To this goal, the theory of germs introduced by Andreianov, Karlsen and Risebro is extended to this case of non-conservative interface coupling. Exact solutions for the Riemann Problem of particles drifting apart are computed and analysis on the behavior of entropy solutions across the particle related interfaces is used to determine physically relevant and consistent behavior for merging and splitting of particles. Well-posedness of entropy solutions to the Cauchy problem is proven, using an explicit construction method, L-infinity bounds, an approximation of the particle paths and compactness arguments to obtain existence of entropy solutions. Uniqueness is shown in the class of weak entropy solutions using almost classical Kruzkov-type analysis and the notion of L1-dissipative germs. Necessary fundamentals of hyperbolic conservation laws, including weak solutions, shocks and rarefaction waves and the Rankine-Hugoniot condition are briefly recapitulated.},
  subject      = {Hyperbolische Differentialgleichung},
  language  = {en}
}
@phdthesis{Rehberg2020,
  author    = {Rehberg, Martin},
  title     = {Weighted uniform distribution related to primes and the Selberg Class},
  doi       = {10.25972/OPUS-20925},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-209252},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2020},
  abstract  = {In the thesis at hand, several sequences of number theoretic interest will be studied in the context of uniform distribution modulo one. <br> <br> In the first part we deduce for positive and real \(z\not=1\) a discrepancy estimate for the sequence \( \left((2\pi )^{-1}(\log z)\gamma_a\right) \), where \(\gamma_a\) runs through the positive imaginary parts of the nontrivial \(a\)-points of the Riemann zeta-function. If the considered imaginary parts are bounded by \(T\), the discrepancy of the sequence \( \left((2\pi )^{-1}(\log z)\gamma_a\right) \) tends to zero like \( (\log\log\log T)^{-1} \) as \(T\rightarrow \infty\). The proof is related to the proof of Hlawka, who determined a discrepancy estimate for the sequence containing the positive imaginary parts of the nontrivial zeros of the Riemann zeta-function. <br> <br> The second part of this thesis is about a sequence whose asymptotic behaviour is motivated by the sequence of primes. If \( \alpha\not=0\) is real and \(f\) is a function of logarithmic growth, we specify several conditions such that the sequence \( (\alpha f(q_n)) \) is uniformly distributed modulo one. The corresponding discrepancy estimates will be stated. The sequence \( (q_n)\) of real numbers is strictly increasing and the conditions on its counting function \( Q(x)=\\#\lbrace q_n \leq x \rbrace \) are satisfied by primes and primes in arithmetic progessions. As an application we obtain that the sequence \( \left( (\log q_n)^K\right)\) is uniformly distributed modulo one for arbitrary \(K>1\), if the \(q_n\) are primes or primes in arithmetic progessions. The special case that \(q_n\) equals the \(\textit{n}\)th prime number \(p_n\) was studied by Too, Goto and Kano. <br> <br> In the last part of this thesis we study for irrational \(\alpha\) the sequence \( (\alpha p_n)\) of irrational multiples of primes in the context of weighted uniform distribution modulo one. A result of Vinogradov concerning exponential sums states that this sequence is uniformly distributed modulo one. An alternative proof due to Vaaler uses L-functions. We extend this approach in the context of the Selberg class with polynomial Euler product. By doing so, we obtain two weighted versions of Vinogradov's result: The sequence \( (\alpha p_n)\) is \( (1+\chi_{D}(p_n))\log p_n\)-uniformly distributed modulo one, where \( \chi_D\) denotes the Legendre-Kronecker character. In the proof we use the Dedekind zeta-function of the quadratic number field \( \Bbb Q (\sqrt{D})\). As an application we obtain in case of \(D=-1\), that \( (\alpha p_n)\) is uniformly distributed modulo one, if the considered primes are congruent to one modulo four. Assuming additional conditions on the functions from the Selberg class we prove that the sequence \( (\alpha p_n) \) is also \( (\sum_{j=1}^{\nu_F}{\alpha_j(p_n)})\log p_n\)-uniformly distributed modulo one, where the weights are related to the Euler product of the function.},
  subject      = {Zahlentheorie},
  language  = {en}
}
@phdthesis{Scherz2024,
  author    = {Scherz, Jan},
  title     = {Weak Solutions to Mathematical Models of the Interaction between Fluids, Solids and Electromagnetic Fields},
  doi       = {10.25972/OPUS-34920},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-349205},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {We analyze the mathematical models of two classes of physical phenomena. The first class of phenomena we consider is the interaction between one or more insulating rigid bodies and an electrically conducting fluid, inside of which the bodies are contained, as well as the electromagnetic fields trespassing both of the materials. We take into account both the cases of incompressible and compressible fluids. In both cases our main result yields the existence of weak solutions to the associated system of partial differential equations, respectively. The proofs of these results are built upon hybrid discrete-continuous approximation schemes: Parts of the systems are discretized with respect to time in order to deal with the solution-dependent test functions in the induction equation. The remaining parts are treated as continuous equations on the small intervals between consecutive discrete time points, allowing us to employ techniques which do not transfer to the discretized setting. Moreover, the solution-dependent test functions in the momentum equation are handled via the use of classical penalization methods. The second class of phenomena we consider is the evolution of a magnetoelastic material. Here too, our main result proves the existence of weak solutions to the corresponding system of partial differential equations. Its proof is based on De Giorgi's minimizing movements method, in which the system is discretized in time and, at each discrete time point, a minimization problem is solved, the associated Euler-Lagrange equations of which constitute a suitable approximation of the original equation of motion and magnetic force balance. The construction of such a minimization problem is made possible by the realization that, already on the continuous level, both of these equations can be written in terms of the same energy and dissipation potentials. The functional for the discrete minimization problem can then be constructed on the basis of these potentials.},
  subject      = {Fluid-Struktur-Wechselwirkung},
  language  = {en}
}
@phdthesis{Fritze2021,
  author    = {Fritze, Lars},
  title     = {Ways to Novel Inorganic-Organic Hybrid Materials Applying New B-C Bond Formation Strategies},
  doi       = {10.25972/OPUS-24217},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-242173},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {π-Conjugated oligomers and polymers with tricoordinate boron centers incorporated into the main chain have attracted considerable attention as the interaction of the vacant p orbital on boron with an adjacent π system of the chain leads to conjugated materials with intriguing optical and electronic properties. This enables applicability in organic electronics and optoelectronics (OLEDs, OFETs, photovoltaics) or as sensory materials. The potential of our B-C coupling protocol using metal-free catalytic Si/B exchange condensation is demonstrated by the synthesis of a series of π-conjugated monodisperse (het)aryl oligoboranes. Variation of the (het)aryl moieties allowed for tunability of the optoelectronic properties of the materials. Additionally, catalytic C-C cross-coupling strategies were applied to synthesize oligofuryl-based mono- and bisboranes, as well as polymers. These studies led to very robust and highly emissive compounds (f up to 97 \%), which allow for tuning of their emission color from blue to orange. Furthermore, this work includes investigations of reaction routes to a kinetically stabilized tetraoxaporphyrinogen. Being a key aspect of this work, a full investigation of the mechanism of the catalytic Si/B exchange was carried out. Additionally, this work presents the use of borenium cations to perform B-C coupling via intermolecular electrophilic borylation. Similar to the Si/B exchange, this route is capable of giving access to diaryl(bromo)boranes.},
  subject      = {Konjugierte Polymere},
  language  = {en}
}
@phdthesis{Then2017,
  author    = {Then, Patrick},
  title     = {Waveguide-based single molecule detection in flow},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-140548},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {In this work fluorescence-based single molecule detection at low concetration is investigated, with an emphasis on the usage of active transport and waveguides. Active transport allows to overcome the limits of diffusion-based systems in terms of the lowest detectable threshold of concentration. The effect of flow in single molecule experiments is investigated and a theoretical model is derived for laminar flow. Waveguides on the other hand promise compact detection schemes and show great potential for their possible integration into lab-on-a-chip applications. Their properties in single molecule experiments are analyzed with help of a method based on the reciprocity theorem of electromagnetic theory.},
  subject      = {Optik},
  language  = {en}
}
@phdthesis{Richter2021,
  author    = {Richter, Julian Alexander J{\"u}rgen},
  title     = {Wave-CAIPI for Accelerated Dynamic MRI of the Thorax},
  doi       = {10.25972/OPUS-23207},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-232071},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {In summary, the wave-CAIPI k-space trajectory presents an efficient sampling strategy for accelerated MR acquisitions. Using wave-CAIPI in parallel imaging reconstructions leads to a reduced noise level in the reconstructed images, compared to the Cartesian standard trajectory. This effect could be quantified by means of noise and SNR calculations. An SNR gain can be traded for a reduced scan time, i.e., additional undersampling, or for an enhanced image quality, keeping scan time constant. Acceleration of MR imaging is especially important in dynamic applications, since these examinations are inherently time-consuming. The impact of wave-CAIPI sampling on image quality and its potential for scan time reduction was investigated for two dynamic applications: self-gated dynamic 3D lung MRI during free breathing and cardiac 4D flow MRI. Dynamic 3D Lung MRI By employing wave-CAIPI sampling in self-gated, free-breathing dynamic 3D lung MRI for the purpose of radiotherapy treatment planning, the image quality of accelerated scans could be enhanced. Volunteer examinations were used to quantify image quality by means of similarity between accelerated and reference images. To this end, the normalized mutual information and the root-mean-square error were chosen as quantitative image similarity measures. The wave-CAIPI sampling was shown to exhibit superior quality, especially for short scan times. The values of the normalized mutual information were (10.2 +- 7.3)\% higher in the wave-CAIPI case -- the root-mean-square error was (18.9 +- 13.2)\% lower on average. SNR calculations suggest an average SNR benefit of around 14\% for the wave-CAIPI, compared to Cartesian sampling. Resolution of the lung in 8 breathing states can be achieved in only 2 minutes. By using the wave-CAIPI k-space trajectory, precise tumor delineation and assessment of respiration-induced displacement is facilitated. Cardiac 4D Flow MRI In 4D flow MRI, acceleration of the image acquisition is essential to incorporate the corresponding scan protocols into clinical routine. In this work, a retrospective 6-fold acceleration of the image acquisition was realized. Cartesian and wave-CAIPI 4D flow examinations of healthy volunteers were used to quantify uncertainties in flow parameters for the respective sampling schemes. By employing wave-CAIPI sampling, the estimated errors in flow parameters in 6-fold accelerated scans could be reduced by up to 55\%. Noise calculations showed that the noise level in 6-fold accelerated 4D flow acquisitions with wave-CAIPI is 43\% lower, compared to Cartesian sampling. Comparisons between Cartesian and wave-CAIPI 4D flow examinations with a prospective acceleration factor R=2 revealed small, but partly statistically significant discrepancies. Differences between 2-fold and 6-fold accelerated wave-CAIPI scans are comparable to the differences between Cartesian and wave-CAIPI examinations at R=2. Wave-CAIPI 4D flow acquisitions of the aorta could be performed with an average, simulated scan time of under 4 minutes, with reduced uncertainties in flow parameters. Important visualizations of hemodynamic flow patterns in the aorta were only slightly affected by undersampling in the wave-CAIPI case, whereas for Cartesian sampling, considerable discrepancies were observed.},
  subject      = {Magnetresonanztomographie},
  language  = {en}
}
@phdthesis{Elbracht2009,
  author    = {Elbracht, Oliver},
  title     = {Wave Extraction in Numerical Relativity},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-40672},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2009},
  abstract  = {Diese Arbeit konzentriert sich auf eine fundamentale Problematik der numerischen Relativit{\"a}tstheorie: Die Extraktion von Gravitationswellen in einer eich- und koordinateninvarianten Formulierung, um ein physikalisch interpretierbares Objekt zu erhalten. Es wird eine neue Methodik entwickelt, um die physikalisch relevanten Gr{\"o}ßen aus einer numerisch erzeugten Raumzeit zu extrahieren. Wir pr{\"a}sentieren eine allgemeing{\"u}ltige kanonische Formulierung der Weyl Skalare im Newman-Penrose Formalismus als eine Funktion von fundamentalen Raumzeit-Invarianten. Dadurch zeigt sich, dass mit Hilfe dieser Methodik die explizite Konstruktion eines Vierbeins vollst{\"a}ndig redundant ist. Als weiteren Schwerpunkt charakterisieren wir innerhalb des Newman-Penrose Formalismus eine spezielle Untergruppe von Tetraden, die transversen Frames. Es wird eine bisher unbekannte Verbindung zwischen den prim{\"a}r genutzen Vierbeinen f{\"u}r die Extraktion der Wellenform abgeleitet, dem Gram-Schmidt Vierbein und dem quasi-Kinnersley Vierbein. Abschliessend studieren wir die Abh{\"a}ngigkeit der Gravitationswellen eines gest{\"o}rten Schwarzen Loches vom verwendeten Vierbein. Wir berechnen die Form der Gravitationswellen in dieser Raumzeit und demonstrieren inwieweit unsere neue Methodik robustere und exaktere Ergebnisse liefert, als die gew{\"o}hnlich verwendeten Ans{\"a}tze zur Extraktion des Signals.},
  subject      = {Allgemeine Relativit{\"a}tstheorie},
  language  = {en}
}
@phdthesis{Jiang2004,
  author    = {Jiang, Fan},
  title     = {Water, mineral nutrient and hormone flows and exchanges in the hemiparasitic association between root hemiparasite Rhinanthus minor and the host Hordeum vulgare},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-9863},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2004},
  abstract  = {Summary Using the facultative root hemiparasite Rhinanthus minor and Hordeum vulgare as a host, several aspects of water relations, the flows and partitioning of mineral nutrients, the flows, depositions and metabolism of abscisic acid (ABA) and zeatin type cytokinins (zeatin Z, zeatin riboside ZR, zeatin nucleotide ZN) within the host, the parasite and between host and parasite and the flows and partitioning of the transport metabolites mannitol in the parasite, and of sucrose in the host, have been studied during the study period 41 to 54 days after planting, i.e about 30 to 43 days after successful attachment of the parasite to the host. Water relations Extraction of xylem sap by the parasite from the host's roots is facilitated by considerably higher transpiration per leaf area in the parasite than in the host and by the fact that stomata of attached Rhinanthus were wide open all day and night despite extremely high ABA concentrations in the leaves. By comparison, another related root hemiparasite, Melampyrum arvense, parasitising on various grasses in the field (botanic garden), showed normal diurnal stomatal behaviour. The abnormal behaviour of Rhinanthus stomata was not due to anatomical reasons as closure could be induced by applying high external ABA concentrations. Remarkable differences have been detected between the hydraulic conductance of barley seminal roots showing relatively low values, and that of Rhinanthus the seminal root showing very high values. The latter could be related to the observed high ABA concentrations in these roots. Whole plant water uptake, transpirational losses, growth-dependent deposition and the flows of water within the plants have been measured in singly growing Rhinanthus and Hordeum plants and in the parasitic association between the two. Water uptake, deposition and transpiration in Rhinanthus were dramatically increased after attachment to the barley host; most of the water used by the parasite was extracted as xylem sap from the host, thereby scavenging 20\% of the total water taken up by the host's roots. This water uptake by the parasitised host, however, due to a parasite induced reduction in the hosts growth, was decreased by 22\% as compared to non- parasitised barley. The overall changes in growth-related water deposition in host and parasite pointed to decreased shoot and relatively favoured root growth in the host and to strongly favoured shoot growth and less strongly increased root growth only in the parasite. These changes in the host became more severe, when more than one Rhinanthus was parasitising one barley plant. Mineral nutrients relations 5 mM NO3- supply In parasitising Rhinanthus shoot growth was 12-fold, but root growth only twofold increased compared to the non-parasitising (very small) plants. On the other hand, in the Hordeum host, shoot dry matter growth was clearly reduced, by 33\% in leaf laminae and by 52\% in leaf sheaths, whereas root growth was only slightly reduced as a consequence of parasitism. Growth-dependent increments of total N and P and of K, Ca and Mg in parasitising Rhinanthus shoot were strongly increased, particularly increments of total N and P, which were 18 and 42 times, respectively, higher than in the small solitary Rhinanthus. On the other hand, increments of the above mineral nutrients in leaf sheaths of parasitised Hordeum vulgare were more strongly decreased than in leaf laminae in response to parasitic attack. Estimation of the flows of nutrients revealed that Rhinanthus withdrew from the host xylem sap about the same percentage of each nutrients: 18\% of total N, 22\% of P and 20\% of K. Within the host almost all net flows of nutrient ions were decreased due to parasitism, but retranslocation from shoot to root-as related to xylem flow-was somewhat increased for all nutrients. Quantitative information is provided to show that the substantially increased growth in the shoot of attached Rhinanthus and the observed decrease in Hordeum shoot growth after infection were related to strongly elevated supply of nitrogen and phosphorus in the parasite and to incipient deficiency of these nutrients in the parasitised host. The flows of nutrients between host and parasite are discussed in terms of low selectivity of nutrient abstraction from the host xylem by the hemiparasite Rhinanthus minor. 1 mM NO3- or 1 mM NH4+ supply Rhinanthus shoot growth as measured by dry matter increase, was 19-fold (1 mM NO3-) and 15-fold (1 mM NH4+), but root growth only twofold (1 mM NO3-) and 2.9-fold (1 mM NH4+) increased-relative to singly growing Rhinanthus-when parasitising on host barley. In the Hordeum host, shoot dry matter growth was clearly reduced, whereas root growth was only slightly affected. Growth-dependent increments of total N and P and of K, Ca and Mg in parasitising Rhinanthus shoot were strongly increased, particularly increments of total N or of P, which were 20 or 53 times (1 mM NO3-) and 18 or 51 times (1 mM NH4+) , respectively, higher than those in solitary Rhinanthus. Within the host almost all net flows of nutrient ions were decreased due to parasitism. Flows of mannitol in parasite and sucrose flows in host barley When the plants were supplied with 5 mM NO3-, the biosynthesis of mannitol in Rhinanthus shoots increased 16-fold by parasitism, resulting in a 15-fold higher mannitol flow in the phloem and a 10-fold higher deposition in the shoot. Also the backward transport of mannitol in the xylem were increased 10-fold after attachment. Lower level nitrogen supply increased the deposition of mannitol in both single and attached Rhinanthus shoot and root. No mannitol was found in barley roots even in the direct vicinity of the haustoria. This indicates there are no backward transport of xylem sap from parasite to host. Compared to unparasitised barley, the net biosynthesis and deposition of sucrose in the shoot and the phloem flow was decreased substantially when plants were supplied with 5 mM NO3- or 1 mM NO3-. No sucrose has been detected in barley xylem sap and consequently there was no indication of a sucrose transfer from the host to the parasite. A possible involvement of mannitol in the abscisic acid relations of the parasite is discussed. ABA relations When the plants were supplied with 5 mM NO3-, there were weak or no effects of parasitism on ABA flows, biosynthesis and ABA degradation in barley. However, ABA growth-dependent deposition was significantly increased in the leaf laminae (3 fold) and in leaf sheath (2.4 fold), but not in roots. Dramatic changes in ABA flows, metabolism and deposition on a per plant basis, however, have been observed in Rhinanthus. Biosynthesis in the roots was 12-fold higher after attachment resulting in 14-fold higher ABA flows in the xylem. A large portion of this ABA was metabolised, a small portion was deposited. Phloem flows of ABA were increased 13-fold after attachment. The concentrations of ABA in tissues and xylem sap were higher in attached Rhinanthus by an order of magnitude than in host tissues and xylem sap. Similar dramatic difference existed when comparing the high concentrations in the xylem sap of single Rhinanthus with unparasitised barley. As compared to 5 mM NO3-, lower NO3- or 1 mM NH4+ supply doubled the ABA concentrations in barley leaf laminae, while having only small or no significant effects in the other organs. The possible special functions of ABA for the parasite are discussed. Zeatin type cytokinins relations Parasitism decreased, in the case of zeatin (Z), the synthesis (by 57\%) in the root, xylem flows (by 56\%) and metabolism (by 71\%) in leaf laminae, however, increased the phloem flows of zeatin massively (3-fold) in host barley. The deposition of zeatin in the root of Rhinanthus and the flowing in xylem and phloem were 24, 12, 29-fold, respectively, increased after successfully attaching to the host barley. However, net biosynthesis of zeatin in Rhinanthus roots decreased by 39\% after attachment. This indicates that a large portion (70\%) of xylem flow of zeatin in attached Rhinanthus was extracted from the host. In singly growing Rhinanthus plants, the balance of zeatin deposition in the shoot was negative, i.e. zeatin was metabolised and exported back to root in the phloem. The xylem flows of zeatin riboside (ZR) in barley decreased by 39\% after infected by Rhinanthus; phloem flow, which was 117\% relative to xylem flow was less decreased (by 13\%) after infection. Deposition of ZR has not been significantly affected in the leaf laminae, in leaf sheaths and roots. After parasitising on the host barley depositions in root, xylem flow and phloem flow increased 12, 18, 88-fold respectively in Rhinanthus. A large portion (57\%) of xylem flow of ZR in attached Rhinanthus was extracted from the host. In single Rhinanthus increament of shoot zeatin riboside was negative and a substantial portion was degraded in shoot and the rest was retranslocated back to the root in the phloem. A significant depositions of Z and ZR were detected in the haustoria of the Rhinanthus/barley association. Flows and deposition of zeatin nucleotides also have been investigated. The possible physiological functions of the large quantities of Z and ZR derived from the host barley, for the improved growth and the stomatal opening in the parasitising Rhinanthus are discussed.},
  subject      = {Hemiparasit},
  language  = {en}
}
@phdthesis{Mederer2009,
  author    = {Mederer, Joachim},
  title     = {Water Resources and Dynamics of the Troodos Igneous Aquifer-system, Cyprus - Balanced Groundwater Modelling -},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-37306},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2009},
  abstract  = {The study investigates the water resources and aquifer dynamics of the igneous fractured aquifer-system of the Troodos Mountains in Cyprus, using a coupled, finite differences water balance and groundwater modelling approach. The numerical water balance modelling forms the quantitative framework by assessing groundwater recharge and evapotranspiration, which form input parameters for the groundwater flow models. High recharge areas are identified within the heavily fractured Gabbro and Sheeted Dyke formations in the upper Troodos Mountains, while the impervious Pillow Lava promontories - with low precipitation and high evapotranspiration - show unfavourable recharge conditions. Within the water balance studies, evapotranspiration is split into actual evapotranspiration and the so called secondary evapotranspiration, representing the water demand for open waters, moist and irrigated areas. By separating the evapotranspiration of open waters and moist areas from the one of irrigated areas, groundwater abstraction needs are quantified, allowing the simulation of single well abstraction rates in the groundwater flow models. Two sets of balanced groundwater models simulate the aquifer dynamics in the presented study: First, the basic groundwater percolation system is investigated using two-dimensional vertical flow models along geological cross-sections, depicting the entire Troodos Mountains up to a depth of several thousands of metres. The deeply percolating groundwater system starts in the high recharge areas of the upper Troodos, shows quasi stratiform flow in the Gabbro and Sheeted Dyke formations, and rises to the surface in the vicinity of the impervious Pillow Lava promontories. The residence times mostly yield less than 25 years, the ones of the deepest fluxes several hundreds of years. Moreover, inter basin flow and indirect recharge of the Circum Troodos Sedimentary Succession are identified. In a second step, the upper and most productive part of the fractured igneous aquifer-system is investigated in a regional, horizontal groundwater model, including management scenarios and inter catchment flow studies. In a natural scenario without groundwater abstractions, the recovery potential of the aquifer is tested. Predicted future water demand is simulated in an increased abstraction scenario. The results show a high sensitivity to well abstraction rate changes in the Pillow Lava and Basal Group promontories. The changes in groundwater heads range from a few tens of metres up to more than one hundred metres. The sensitivity in the more productive parts of the aquifer-system is lower. Inter-catchment flow studies indicate that - besides the dominant effluent conditions in the Troodos Mountains - single reaches show influent conditions and are sub-flown by groundwater. These fluxes influence the local water balance and generate inter catchment flow. The balanced groundwater models form thus a comprehensive modelling system, supplying future detail models with information concerning boundary conditions and inter-catchment flow, and allowing the simulation of impacts of landuse or climate change scenarios on the dynamics and water resources of the Troodos aquifer-system.},
  subject      = {Zypern},
  language  = {en}
}
@phdthesis{Schindler2022,
  author    = {Schindler, Dorothee},
  title     = {Water Oxidation with Multinuclear Ruthenium Catalysts},
  doi       = {10.25972/OPUS-23309},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-233093},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {In terms of the need of environmentally benign renewable and storable energy sources, splitting of water into hydrogen and oxygen by using sunlight is a promising approach. Hereby, water oxidation catalysts (WOCs) are required to perform the water oxidation comprising the transfer of four electrons to provide the reducing equivalents for producing hydrogen. The class of Ru(bda) (bda = 2,2'-bipyridine-6,6'-dicarboxylate) catalysts has proven to be efficient for this reaction. In this thesis, ligand exchange processes in Ru(bda) complexes have been analyzed and the formation of multinuclear macrocyclic WOCs was studied. Based on the knowledge acquired by these studies, new multinuclear cyclic Ru(bda) complexes have been synthesized and their catalytic efficiencies in homogeneous water oxidation have been investigated. Going one step further for setting up functional devices, molecular WOCs have been immobilized on conducting or semiconducting supporting materials. Direct anchoring on carbon nanotubes generated a promising materials for further applications.},
  subject      = {Rutheniumkomplexe},
  language  = {en}
}
@phdthesis{Duenkeloh2011,
  author    = {D{\"u}nkeloh, Armin},
  title     = {Water Balance Dynamics of Cyprus - Actual State and Impacts of Climate Change},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-75165},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2011},
  abstract  = {A completely revised and enhanced version of the water balance model MODBIL of the regional water balance dynamics of Cyprus was developed for this study. The model is based on a physical, process-oriented, spatially distributed concept and is applied for the calculation of all important water balance components of the island for the time period of 1961-2004. The calibrated results are statistically analysed and visualised for the whole island area, and evaluated with respect to the renewability of natural water resources. Climate variability and changes of the past decades are analysed with regard to their influence on water balances. A further part of the study focusses on the simulation of impacts of potential climate change. The water balances are simulated under changing climatic conditions on the base of theoretical precipitation, temperature and relative humidity changes and the revealed impacts on the water balances and renewable resources are discussed. Furthermore, a first principal water balance scenario is developed for the assessment of the regional hydrological changes expected for Cyprus by the end of the 21st century. The scenarios are based on recently calculated climate change assessments for this part of the Mediterranean, under an assumed further increase of greenhouse gasses in the atmosphere.},
  subject      = {Wasserhaushalt},
  language  = {en}
}
@phdthesis{NghengwaAche2019,
  author    = {Nghengwa Ache, Patience},
  title     = {Waste Management As a Correlate of Environmental Sustainability in Sub-Saharan Africa: The Example of Imo State, Nigeria},
  doi       = {10.25972/OPUS-19224},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-192240},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2019},
  abstract  = {Summary Introduction. Rapid and uncontrolled industrialisation and urbanisation in most developing countries are resulting in land, air and water pollution at rates that the natural environment cannot fully renew. These contemporary environmental issues have attracted local, national and international attention. The problem of urban garbage management is associated with rapid population growth in developing countries. These are pertinent environmental crises of sustainability and sanitation in Sub-Saharan Africa and other Third World countries. Despite efforts of the various tiers of government (the case of Nigeria with three tiers: Federal, State and Local governments) in managing solid waste in urban centres, it is still overflowing open dumpsites, litters streets and encroaches into water bodies. These affect the quality of urban living conditions and the natural environment. Sub-Saharan and other developing countries are experiencing an upsurge in the accumulation and the diversity of waste including E-waste, waste agricultural biomass and waste plastics. The need for effective, sustainable and efficient management of waste through the application of 3Rs principle (Reduce, Reuse, and Recycle) is an essential element for promoting sustainable patterns of consumption and production. This study examined waste management in Imo State, Nigeria as an aspect correlated to the sustainability of its environment. Materials and methods. To analyse waste management as a correlate of environmental sustainability in Sub-Saharan Africa, Imo State, in eastern Nigeria was chosen as a study area. Issues about waste handling and its impact on the environment in Imo have been reported since its creation in 1976; passing through the State with the cleanest State capital in 1980 to a 'dunghill' in 2013 and a 'garbage capital' on October 1, 2016. Within this State, three study sites were selected - Owerri metropolis (the State capital) Orlu and Okigwe towns. At these sites, households, commercial areas, accommodation and recreational establishments and schools, as well as dumpsites were investigated to ascertain the composition, quantity, distribution, handling patterns of waste in relation to the sustainability of the State's environment. This was done conveniently but randomly through questionnaires, interviews, focus group discussions and non-participant observation; these were all heralded by a detailed deskwork. Data were entered using Microsoft Office Excel and were explored and analysed using the Statistical Package for Social Sciences - SPSS. Data were made essentially of categorical variables and were analysed using descriptive statistics. The association between categorical variables was measured using Cramer's V the Chi-Square that makes the power and the reliability of the test. Cramer's V is a measure of association tests directly integrated with cross-tabulation. The Chi-Square test of equal proportions was used to compare proportions for significant differences at 0.05 levels. The statistical package - the Epi Info 6.04d was also used since a contingency table had to be created from several sub-outputs and determine the extent of association between the row and column categories. The scale variable 'quantity of waste generated' was described using measures of central tendency. It was screened for normality using the Kolmogorov-Smirnov and Shapiro-Wilk tests for normality; in all context, the normality assumption was violated (P<0.05). Five null hypotheses were tested using Logistic Regression model. The explanatory power of individual conceptual component was calculated using the Cox \& Snell R2 and that of individual indicators was also appraised using the Likelihood Ratio test. In the context of this work, the significance of the variability explained by the model (baseline model) was appraised using the Omnibus Tests of Model Coefficients, the magnitude of this variability explained by the model using the Cox \& Snell R2 and the effects of individual predictors using the Likelihood Ratio test. Qualitatively, data from open-ended items, observations and interviews were analysed using the process of thematic analysis whereby concepts or ideas were grouped under umbrella terms or keywords. The results were presented using tables, charts, graphs, photos and maps. Findings and discussions. The total findings and analyses indicated that proper waste handling in Imo State, Nigeria has a positive impact on the environment. This was assessed by the community's awareness of waste management via sources like the radio and the TV, their education on waste management and schools' integration of environmental education in their program. Although most community members perceived the State's environment as compared to it about 10 years' back has worsened, where they were conscious of proper waste handling measures, the environment was described to be better. This influence of environmental awareness and education on environmental sustainability appraised using Logistic Regression Model, portrayed a significant variability (Omnibus Tests of Model Coefficients: χ2=42.742; P=0.014), inferring that environmental awareness and education significantly predict environmental sustainability. The findings also revealed that organic waste generation spearheaded amongst other waste types like paper, plastic, E-waste, metal, textile and glass. While waste pickers always sorted paper, plastics, aluminium and metal, some of them also sorted out textile and glass. Statistically (P<0.05), in situations where waste was least generated (i.e., 1-2kg per day), community members maintained that the environmental quality was better in comparison to 10 years' back. Waste items like broken glass and textile as well as the remains of E-waste after the extraction of copper and brass were not sorted for and these contributed more to environmental degradation. Similarly, the influence of wealth on environmental sustainability was appraised using Logistic Regression Model including development index related indicators like education, occupation, income and the ability to pay for waste disposal. Harmonising the outcome, farmers, who were mostly the least educated claimed to notice more environmental improvement. In addition, those who did not agree to pay for waste disposal who were mostly those with low income (less than 200,000 Naira, i.e. about 620 Euros monthly) perceived environmental improvement more than those with income above 200,000 Naira. This irony can be attributed to the fact that those with low educational backing lack the capacity to appreciate environmental sustainability pointers well as compared to those with a broader educational background with critical thinking. The employment and poverty reduction opportunities pertaining to waste management on environmental sustainability was appraised using qualitative thematic analysis. All community members involved in sorting, buying and selling of waste items had no second job. They attested that the money earned from their activities sustained their livelihood and families. Some expressed love for the job, especially as they were their own masters. Waste picking and trading in waste items are offering employment opportunities to many communities around the world. For instance, in the waste recycling, waste composting, waste-to-energy plants and die Stadtreiniger in W{\"u}rzburg city. The workers in these enterprises have jobs as a result of waste. Waste disposal influence on environmental sustainability was appraised using the Binary Logistic Regression Model and the variability explained by the model was significant. The validity was also supported by the Wald statistics (P<0.05), which indicates the effect of the predictors is significant. Environmental sustainability was greatly reliant on indicators like the frequency at which community members emptied their waste containers; how/where waste is disposed of, availability of disposal site or public bin near the house, etc. Imolites who asserted to have public waste bins or disposal sites near their houses maintained that the quality of the State's environment had worsened as such containers/disposal sites were always stinking as well as had animals and smoke around them. Imolites around disposal sites complained of traits like diarrhoea, catarrh, insect bites, malaria, smoke and polluted air. Conclusions. The liaison between poor waste management strategies and the sustainability of the Imo State environment was considered likely as statistically significant ineffectiveness, lack of awareness, poverty, insufficient and unrealistic waste management measures were found in this study area. In these situations, the environment was said to have not improved. Such inadequacies in the handling of generated waste did not only expose the citizenry to health dangers but also gave rise to streets and roads characterized by filth and many unattended disposal sites unleashing horrible odour to the environment and attracting wild animals. This situation is not only prevalent in Imo State, Nigeria but in many Sub-Saharan cities. Future Perspectives. To improve the environment in Sub-Saharan Africa, it is imperative to practice an inclusive and integrated sustainable waste management system. The waste quantity in this region is fast growing, especially food/organic waste. The region should aim at waste management laws and waste reduction strategies, which will help save and produce more food that it really needs. Waste management should be dissociated from epidemic outbreaks like cholera, typhoid, Lassa fever and malaria, whose vectors thrive in filthy environments. Water channels and water bodies should not be waste disposal channels or waste disposal sites.},
  language  = {en}
}
@phdthesis{Scheiner2024,
  author    = {Scheiner, Christin},
  title     = {Vulnerability in adolescence: prevalence, pandemic impact and prevention},
  doi       = {10.25972/OPUS-35164},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-351644},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {This compilation focuses on adolescent mental disorders and their prevention. It comprises three distinct studies, each contributing to a deeper understanding of this critical topic. This work addresses a critical gap in the understanding of, and approach to, adolescent mental health, and as a result reveals a critically important and urgently needed policy implication for action. The thematic structure of these studies begins with an examination of the epidemiology of child and adolescent mental disorders. Baseline data were collected from N = 877 adolescents with a mean age of 12.43 years (SD = 0.65). Mental health problems, such as depressive symptoms, non-suicidal self-injury, suicidal ideation, symptoms of eating disorders, and gender differences, are thoroughly examined. Results revealed a significant portion of our sample displaying mental health problems as early as the 6th and 7th grades, with girls generally being more affected than boys. The findings underscore the importance of early adolescence in the emergence of mental health problems and thereby emphasize the need for preventive measures. Moving beyond prevalence estimates, the compilation delves into the etiology of these disorders, exploring their potential correlation with a COVID-19 infection. Understanding the early signs and risk factors is crucial for timely support. While numerous studies have investigated potential risk and protective factors during the pandemic, our focus shifts to adolescents' coping when an infection with the virus was involved (N = 2,154, M = 12.31, SD = 0.67). We hypothesized that students infected or with close family members infected, would exhibit an increased psychopathology and a decreased functioning of protective factors such as self-efficacy or self-esteem. We found no connection between infection and the mental health status within our sample, but protective factors and mental well-being were positively associated. Thus, universal primary prevention appears to be the preferred approach for promoting mental health. Lastly, the compilation introduces LessStress, a noteworthy contribution to more evidence-based prevention programs. This universal approach is designed to reduce stress in schools, accompanied by a cluster-randomized trial to evaluate its effectiveness (estimated sample size N = 1,894). Existing studies have demonstrated the effectiveness of stress prevention, leading us to introduce a short and easy-to-implement prevention program. There is positive evidence for one-lesson interventions in schools for promoting well-being and health behaviors among adolescents. LessStress is designed based on a life skills approach that not only imparts psychoeducational content but also teaches skills relevant to everyday life and directly applicable. Throughout these studies, a common thread emerges: the pressing need to address mental disorders during childhood and adolescence. These formative years play a pivotal role in the development of mental health problems. These formative years play a crucial role in the development of mental health problems. They highlight the importance of epidemiological data collection and analysis based on the latest models to develop prevention interventions that are not only effective but also reach young people on a global level.},
  subject      = {Jugend},
  language  = {en}
}
@phdthesis{Hoehn2014,
  author    = {H{\"o}hn, Balthasar},
  title     = {Voluntary Interim Auditor Reviews and the Enforcement System in Germany},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-98957},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {Diese Dissertation behandelt das Thema der Finanzberichterstattung und Wirtschaftspr{\"u}fung. In einer allgemeinen Einleitung werden die gesetzlichen Grundlagen zur kapitalmarktorientierten Rechnungslegung und deren Kontrollen beschrieben. Als Folge des Bilanzkontrollgesetzes (BilKoG) wurde die Deutsche Pr{\"u}fstelle f{\"u}r Rechnungslegung (DPR) gegr{\"u}ndet. Diese privatrechtlich organisierte Kontrollinstanz pr{\"u}ft seit dem Jahr 2005 die Rechnungslegung von Unternehmen in Deutschland, die am regulierten Kapitalmarkt gelistet sind (Enforcement). Ziel ist es, eine wahrhafte und transparente Rechnungslegung im Interesse des Kapitalmarkts zu gew{\"a}hrleisten. Neben dem BilKoG wurde durch das am 20.01.2007 in Kraft getretene Transparenzrichtlinie-Umsetzungsgesetz (TUG) die Richtlinie 2004/109/EG in deutsches Recht transformiert. Ziel der EU-Transparenzrichtlinie war 'die Schaffung effizienter, integrierter und transparenter Wertpapierm{\"a}rkte, die Anleger und Kapitalgeber besser {\"u}ber die Finanzlage kapitalmarktorientierter Unternehmen informieren' (Henkel et al. (2008), S. 36). In der vorliegenden Arbeit werden in drei Studien spezielle Fragestellungen ausgehend von der gesetzlichen Entwicklung in Deutschland analysiert. Es werden die Zusammenh{\"a}nge zwischen freiwilligen Kontrollen eines Wirtschaftspr{\"u}fers, staatlichem Enforcement, Pr{\"u}fungskosten und Bilanzpolitik untersucht. Die erste Studie befasst sich mit der freiwilligen Kontrolle der Zwischenberichterstattung kapitalmarktorientierter Unternehmen. Die unterj{\"a}hrige Ver{\"o}ffentlichung von Zwischenberichten bietet entscheidungsrelevante und zeitnahe Informationen f{\"u}r Kapitalmarktakteure. Eine pr{\"u}ferische Durchsicht durch einen Wirtschaftspr{\"u}fer kann zus{\"a}tzliches Vertrauen in die Berichterstattung liefern. Bei der Implementierung des TUG wurde eine pflichtm{\"a}ßige pr{\"u}ferische Durchsicht von Zwischenberichten in Deutschland diskutiert. Der Gesetzgeber entschied sich gegen eine gesetzliche Verpflichtung und {\"u}bertrug die Entscheidung einer freiwilligen unterj{\"a}hrigen Kontrolle an Unternehmen und Wirtschaftspr{\"u}fer. Dieser Marktl{\"o}sung in Deutschland steht eine gesetzlich verpflichtete pr{\"u}ferische Durchsicht z.B. in den USA, Frankreich oder Australien gegen{\"u}ber. Es stellt sich folglich die Frage nach Kosten und Nutzen einer solchen Kontrollleistung, um die Vorteilhaftigkeit der gesetzlichen Pflicht oder der Marktl{\"o}sung zu bewerten. Diese erste Studie nutzt ausgehend vom TUG einen neu entstandenen, beobachtbaren Markt f{\"u}r pr{\"u}ferische Durchsichten in Deutschland. Die Kategorisierung der Pr{\"u}fungskosten in ‚Abschlusspr{\"u}fungskosten' und ‚Pr{\"u}fungsnahen Dienstleistungen' erm{\"o}glicht eine detaillierte Untersuchung der Kosten f{\"u}r das Unternehmen. Weiter wird der Nutzen in Bezug auf die Qualit{\"a}t der unterj{\"a}hrigen Berichterstattung analysiert. In der zweiten Studie wird das Angebot und die Nachfrage von pr{\"u}ferischen Durchsichten beleuchtet. In der Literatur werden die Agency-Kosten, die Corporate Governance Struktur und verschiedene Kostentreiber dieser Pr{\"u}fungsleistung als Einflussfaktoren identifiziert. Der positive Nachfrageschock bei pr{\"u}ferischen Durchsichten im Jahr 2007 l{\"a}sst sich durch diese Faktoren jedoch nicht erkl{\"a}ren. Ausgehend von der neu beobachtbaren Nachfrage stellt die Studie einen Zusammenhang zwischen dem erstmaligen Enforcement von Zwischenberichten durch die DPR und dem Inkrafttretens des TUG im Jahr 2007 her. Die gesetzlichen {\"A}nderungen werden dem theoretischen Rahmen von Angebot und Nachfrage freiwilliger externer Kontrollen zugeordnet. Im n{\"a}chsten Schritt wird der Einfluss von Fehlerentdeckungsrisiken durch die DPR f{\"u}r Management und Aufsichtsrat auf die Nachfrage von externen Kontrollen untersucht. Die dritte Studie befasst sich mit der Effektivit{\"a}t des deutschen Enforcement-Systems, dem Einfluss von Bilanzpolitik und dessen Antizipation in den Pr{\"u}fungskosten. Die Untersuchung analysiert den zeitlichen Aspekt von Bilanzpolitik auf Fehlerver{\"o}ffentlichungen in sp{\"a}teren Perioden. Es besteht die M{\"o}glichkeit die Verschlechterung der wirtschaftlichen Situation eines Unternehmens durch Bilanzpolitik zu verdecken. Ohne Verbesserung der wirtschaftlichen Lage des Unternehmens f{\"u}hrt dieses Verhalten zu einem Bilanzpolitikausmaß außerhalb des gesetzlichen Rahmens und folglich zu einer hohen Wahrscheinlichkeit der Fehlerentdeckung bei DPR Untersuchungen. Die Entwicklung der Bilanzpolitik eines solchen Unternehmens m{\"u}sste im zweiten Schritt mit der Risikokomponente in den Pr{\"u}fungskosten des Wirtschaftspr{\"u}fers in Verbindung stehen. Der risikoorientierte Pr{\"u}fungsansatz und die Antizipation von Bilanzpolitik in den Pr{\"u}fungskosten sollte demnach vor Fehlerbekanntmachung zu einem Anstieg der Pr{\"u}fungskosten f{\"u}hren. Zus{\"a}tzlich ist nach offizieller Fehlerver{\"o}ffentlichung und somit durch eine objektiv beobachtbare Schw{\"a}che im Rechnungslegungssystem oder einem hohen Ausmaß an Bilanzpolitik ein Risikoaufschlag zu vermuten. Der letzte Abschnitt fasst die wichtigsten Aussagen der Dissertation zusammen und erl{\"a}utert die Zusammenh{\"a}nge der Ergebnisse.},
  subject      = {Rechnungslegung},
  language  = {en}
}
@phdthesis{Gehring2001,
  author    = {Gehring, Iris},
  title     = {Volcanostratigraphy using geophysical methods on La Fossa di Vulcano (S-Italy)},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-1181941},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2001},
  abstract  = {For many active volcanoes all over the world a civil protection program, normally combined with hazard maps, exists. Optimising of hazard maps and the associated hazard assessment implies a detailed knowledge of the volcanostratigraphy, because the deposits provoke information on the potential behaviour during a new activity cycle. Pyroclastic deposits, however, may vary widely in thickness and distribution over very short lateral distances. High resolution characterisation of single strata often cannot be archived, if solely sedimentological and geochemical methods are used. Gamma-ray measurements taken in the field combined with grain-size depended magnetic susceptibility measurements made in the laboratory are used in this work to optimise the resolution of volcanostratigraphic investigations. The island of Vulcano is part of the Aeolian Archipelago sited of the northern coast of Sicily. La Fossa cone is the active centre of Vulcano, where fumarolic and seismic activity can be observed. The cone was built up during the last 6,000 years, whereby the last eruption period is dated to historic times (1888-1890). For the tuff cone La Fossa the most likely volcanic hazards are the emplacement of pyroclastic deposits as well as gas hazards (especially SOx and CO2), due to this the detailed knowledge of the stratigraphy is mandatory. Most of the population resides in Vulcano Porto and the nearby sited peninsula of Vulcanello, which are highly endangered locations for a future eruption scenario. Measurements, made in standard outcrops, allow a characterisation of the successions Punte Nere, Tufi Varicolori, Palizzi, Commenda, and Cratere Attuale. A discrimination of all successions by solely one of the methods is rarely possible. In some cases, however, the combination of the methods leads to clear results. It can also be noticed that the exposition as well as the sedimentation type (wet-surge or dry-surge deposits) affect the measurements. In general it can be assumed that the higher the magma is evolved the higher the g -ray values and the lower the susceptibility values. Measurements from the Wingertsberg (Laacher See deposits, Eifel, W-Germany) show clearly that a higher degree of magma evolution correlates with lower susceptibility and higher gamma-ray values. Variations of the values can be observed not only by the change of the degree of magmatic evolution but also by the inhomogeneous deposition conditions. Particularly the gamma-ray measurements show lower values for the wet-surge deposits than for the dry-surge deposits, even though the erupted material has the same geochemical composition. This can be explained especially by reactions inside of the moist eruption cloud and short-time after deposition, when easily soluble elements like K, U, and Th can be leached by these aggressive fluids. Even extended exposition and high water content can provoke depletion of various elements within the complete or parts of the outcrop, too. If the deposits are affected by a fumarolic activity especially the susceptibility values show significant variations, whereas in general extreme low values are observed. Contamination of deposits also can occur, if they are overlain by weathered deposits of higher concentration of K, U, and Th. Weathering and mobilisation within the upper deposits can generate an element enrichment within the lower deposits. In general the element ratios of the barried underlying deposits are less affected than the exposed ones. After gauging the values of the well defined succession for standard outcrops undefined outcrops were measured. These outcrops are not clearly classified by sedimentological and geochemical methods, thus a correlation with the combined geophysical methods is useful. In general the combination of the methods allows a correlation, although in some cases more than one interpretation is possible. But in connection with time marker horizons as well as sedimentological features an interpretation is feasible. These situations show that a classification solely based on geophysical methods is possible for many cases but, if the volcanic system is more complex, a combination with sedimentological and geochemical methods may be needed. The investigations on Vulcano, documented in this work, recommend a re-interpretation of the dispersial of some successions of La Fossa cone, especially the presumption that Tufi Varicolori only exist inside of the Caldera of La Fossa. As a consequence the eruption and energy model especially for Tufi Varicolori have to be reviewed.},
  subject      = {Vulcano},
  language  = {en}
}
@phdthesis{Schneider2024,
  author    = {Schneider, Florian Alexander},
  title     = {Voice Assistants are Social Actors - An Empirical Analysis of Media Equation Effects in Human-Voice Assistant Interaction},
  doi       = {10.25972/OPUS-34670},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-346704},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {Ownership and usage of personal voice assistant devices like Amazon Echo or Google Home have increased drastically over the last decade since their market launch. This thesis builds upon existing computers are social actors (CASA) and media equation research that is concerned with humans displaying social reactions usually exclusive to human-human interaction when interacting with media and technological devices. CASA research has been conducted with a variety of technological devices such as desktop computers, smartphones, embodied virtual agents, and robots. However, despite their increasing popularity, little empirical work has been done to examine social reactions towards these personal stand-alone voice assistant devices, also referred to as smart speakers. Thus, this dissertation aims to adopt the CASA approach to empirically evaluate social responses to smart speakers. With this goal in mind, four laboratory experiments with a total of 407 participants have been conducted for this thesis. Results show that participants display a wide range of social reactions when interacting with voice assistants. This includes the utilization of politeness strategies such as the interviewer-bias, which led to participants giving better evaluations directly to a smart speaker device compared to a separate computer. Participants also displayed prosocial behavior toward a smart speaker after interdependence and thus a team affiliation had been induced. In a third study, participants applied gender stereotypes to a smart speaker not only in self-reports but also exhibited conformal behavior patterns based on the voice the device used. In a fourth and final study, participants followed the rule of reciprocity and provided help to a smart speaker device that helped them in a prior interaction. This effect was also moderated by subjects' personalities, indicating that individual differences are relevant for CASA research. Consequently, this thesis provides strong empirical support for a voice assistants are social actors paradigm. This doctoral dissertation demonstrates the power and utility of this research paradigm for media psychological research and shows how considering voice assistant devices as social actors lead to a more profound understanding of voice-based technology. The findings discussed in this thesis also have implications for these devices that need to be carefully considered both in future research as well as in practical design.},
  subject      = {Mensch-Maschine-Kommunikation},
  language  = {en}
}
@phdthesis{Mayer2006,
  author    = {Mayer, Katrin Doris},
  title     = {Visualization of type I immunity using bicistronic IFN-gamma reporter mice in vitro and in vivo},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-19415},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2006},
  abstract  = {Typ I Immunantworten, wie z.B. gegen Influenza Virus, Sendai Virus aber auch gegen intrazellul{\"a}re Erreger wie Toxoplasma gondii sind klassischerweise durch robuste IFN-\&\#947; Expression gekennzeichnet. Th1 und CD8+ Effektor T Zellen z{\"a}hlen zu den Hauptproduzenten von IFN-\&\#947;. Im Zusammenhang mit Autoimmunerkrankungen, Immunpathologie aber auch Impfstoffentwicklung, ist es {\"u}beraus wichtig die Regulierung von IFN-\&\#947; zu verstehen. In der vorliegenden Arbeit wurde die IFN-\&\#947; Expression von CD4+ und CD8+ T Zellen detailliert charakterisiert. Des Weiteren wurde die Rolle des IFN-\&\#947; Rezeptors f{\"u}r die IFN-\&\#947; Expression von T Zellen untersucht. Unter Zuhilfenahme von bicistronischen IFN-\&\#947;-eYFP Reporter M{\"a}usen, welche die direkte Identifizierung und Isolierung von vitalen IFN-\&\#947; exprimierenden Zellen erm{\"o}glichen, wurde die Expression von IFN-\&\#947; in vitro und in vivo, nach Infektion mit den bereits erw{\"a}hnten Erregern,visualisiert. Die Expression des IFN-\&\#947;-eYFP Reporters zeichnete sich, sowohl in vitro als auch in vivo nach Infektion, durch ein {\"a}ußerst heterogenes Fluoreszenzspektrum aus. Die Helligkeit der Reporter Fluoreszenz korrelierte positiv mit der Menge an IFN-\&\#947; Transkripten und mit der Menge des sekretierten IFN-\&\#947; Proteins nach Stimulierung. Die Helligkeit des Reporters reflektierte das Potenzial zur IFN-\&\#947; Produktion, die eigentliche Sekretion war jedoch weitgehend abh{\"a}ngig von zus{\"a}tzlicher Stimulierung durch Antigen. Des Weiteren korrelierte die Helligkeit des Reporters mit der zunehmenden Produktion von weiteren proinflammatorischen Zytokinen und Chemokinen. Hoch fluoreszente Zellen exprimierten zudem vermehrt Marker auf ihrer Oberflache, die auf akute Aktivierung hinweisen. Die am hellsten eYFP fluoreszierenden Zellen waren im Allgemeinen weiter ausdifferenziert und ihre Pr{\"a}senz war auf bestimmte Organe beschr{\"a}nkt. Die anatomische Begrenzung wurde durch den Erreger bestimmt. IFN-\&\#947; exprimierende Zellen wurden nach Infektion mit Sendai Virus oder Toxoplasma gondii in IFN-\&\#947; Rezeptor defizienten Reporter M{\"a}usen generiert. Die Frequenz und die Helligkeit der eYFP Reporter Expression waren jedoch ver{\"a}ndert. Experimente mit dualen Knochenmarks-Chim{\"a}ren M{\"a}usen, welche mit Wild-Typ und IFN-\&\#947; Rezeptor defizientem Knochenmark rekonstituiert wurden, ergaben eine T Zell-intrinsische Abh{\"a}ngigkeit von IFN-\&\#947; Rezeptor vermittelten Signalen f{\"u}r die Expression von IFN-\&\#947;. Die Helligkeit des Reporters dagegen wurde unabh{\"a}ngig von dem IFN-\&\#947; Rezeptor reguliert. Abschließend wurde ein Modell f{\"u}r die Expression von IFN-\&\#947; in CD4+ und CD8+ T Zellen entwickelt. Zusammenfassend f{\"u}hren diese Ergebnisse zu dem Schluss, dass die Expression von IFN-\&\#947; in CD4+ und CD8+ T Zellen und nach viraler oder parasit{\"a}rer Infektion unterschiedlich reguliert wird. Zus{\"a}tzlich wurde gezeigt, dass der IFN-\&\#947; Rezeptor an der \&\#65279;Modulation der IFN-\&\#947; Expression beteiligt ist.},
  subject      = {Interferon <gamma->},
  language  = {en}
}
@phdthesis{Gromova2007,
  author    = {Gromova, Kira V.},
  title     = {Visualization of the Smad direct signaling response to Bone Morphogenetic Protein 4 activation with FRET-based biosensors},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-25855},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2007},
  abstract  = {The Transforming Growth Factor (TGF) superfamily of cytokines and their serine/threonine kinase receptors play an important role in the regulation of cell division, differentiation, adhesion, migration, organization, and death. Smad proteins are the major intracellular signal transducers for the TGF receptor superfamily that mediate the signal from the membrane into the nucleus. Bone Morphogenetic Protein-4 (BMP-4) is a representative of the TGF superfamily, which regulates the formation of teeth, limbs and bone, and also plays a role in fracture repair. Binding of BMP-4 to its receptor stimulates phosphorylation of Smad1, which subsequently recruits Smad4. A hetero-oligomeric complex consisting of Smad1 and Smad4 then translocates into the nucleus and regulates transcription of target genes by interacting with transcription factors. Although the individual steps of the signaling cascade from the receptor to the nucleus have been identified, the exact kinetics and the rate limiting step(s) have remained elusive. Standard biochemical techniques are not suitable for resolving these issues, as they do not offer sufficiently high sensitivity and temporal resolution. In this study, advanced optical techniques were used for direct visualization of Smad signaling in live mammalian cells. Novel fluorescent biosensors were developed by fusing cyan and yellow fluorescent proteins to the signaling molecules Smad1 and Smad4. By measuring Fluorescence Resonance Energy Transfer (FRET) between the two fluorescent proteins, the kinetics of BMP/Smad signaling was unraveled. A rate-limiting delay of 2 - 5 minutes occurred between BMP receptor stimulation and Smad1 activation. A similar delay was observed in the complex formation between Smad1 and Smad4. Further experimentation indicated that the delay is dependent on the Mad homology 1 (MH1) domain of Smad1. These results give new insights into the dynamics of the BMP receptor - Smad1/4 signaling process and provide a new tool for studying Smads and for testing inhibitory drugs.},
  subject      = {FRET},
  language  = {en}
}
@phdthesis{Hertlein2014,
  author    = {Hertlein, Tobias},
  title     = {Visualization of Staphylococcus aureus infections and antibiotic therapy by bioluminescence and 19F magnetic resonance imaging with perfluorocarbon emulsions},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-105349},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {Staphylococcus aureus is a major threat to public health systems all over the globe. This second most cause of nosocomial infections is able to provoke a wide variety of different types of infection in humans and animals, ranging from superficial skin and skin structure infections to invasive disease like sepsis or pneumonia. But not enough, this pathogen is also notorious in acquiring and/or developing resistance to antimicrobial compounds, thus limiting available treatment options severely. Therefore, development of new compounds and strategies to fight S. aureus is of paramount importance. But since only 1 out of 5 compounds, which entered clinical trials, becomes a drug, the preclinical evaluation of promising compounds has to be reconsidered, too. The aim of this thesis was to address both sides of this problem: first, to improve preclinical testing by incorporating in vivo imaging technologies to the preclinical testing procedure in order to acquire additional and clearer data about efficacy of promising compounds and second, by evaluating lysostaphin, which is a promising, new option to fight S. aureus infections. The first aim of this thesis focused on the establishment of a dual modality in vivo imaging platform, consisting of Bioluminescence Imaging (BLI) and Magnetic Resonance Imaging (MRI), to offer detailed insights into the course and gravity of S. aureus infection in the murine thigh infection model. Since luciferase-expressing S. aureus strains were generated in former studies and enabled thus bioluminescence imaging of bacterial infection, this technology should be implemented into the compound evaluation platform in order to non-invasively track the bacterial burden over time. MRI, in contrast, was only rarely used in earlier studies to visualize and measure the course of infection or efficacy of anti-bacterial therapy. Thus, the first set of experiments was performed to identify benefits and drawbacks of visualizing S. aureus infections in the mouse model by different MR methods. Native, proton-based MR imaging showed in this regard increased T2 relaxation times in the infected thigh muscles, but it was not possible to define a clear border between infected and uninfected tissue. Iron oxide nanoparticles and perfluorocarbon emulsions, two MR contrast agents or tracer, in contrast, offered this distinction. Iron oxide particles were detected in this regard by their distortion of 1H signal in proton-based MRI, while perfluorocarbon emulsion was identified by 19F MRI. Mammals do not harbor sufficient intrinsic amounts of 19F to deliver specific signal and therefore, 19F MR imaging visualizes only the signal of administered perfluorocarbon emulsion. The in vivo accumulation of perfluorocarbon emulsion can be imaged by 19F MRI and overlayed on a simultaneously acquired 1H MR image, which shows the anatomical context in clear detail. Since this is advantageous compared to contrast agent based MR methods like iron oxide particle-based MRI, further experiments were performed with perfluorocarbon emulsions and 19F MRI. Experimental studies to elucidate the accumulation of perfluorocarbon emulsion at the site of infection showed robust 19F MR signals after administration between day 2 and at least day 8 p.i.. Perfluorocarbon emulsion accumulated in all investigated mice in the shape of a 'hollow sphere' at the rim of the abscess area and the signal remained stable as long as the infection prevailed. In order to identify the mechanism of accumulation, flow cytometry, cell sorting and histology studies were performed. Flow cytometry and cell sorting analysis of immune cells at the site of infection showed that neutrophils, monocytes, macrophages and dendritic cells carried contrast media at the site of infection with neutrophils accounting for the overwhelming portion of perfluorocarbon signal. In general, most of the signal was associated with immune cells, thus indicating specific immune cell dependent accumulation. Histology supported this observation since perfluorocarbon emulsion related fluorescence could only be visualized in close proximity to immune cell nuclei. After establishing and testing of 19F MRI with perfluorocarbon emulsions as infection imaging modality, the effects of antibiotic therapy upon MR signal was investigated in order to evaluate the capability of this modality for preclinical testing procedure. Thus, the efficacy of vancomycin and linezolid, two clinically highly relevant anti - S. aureus compounds, were tested in the murine thigh infection model. Both of them showed reduction of the colony forming units and bioluminescence signal, but also of perfluorocarbon emulsion accumulation strength and volume at the site of infection, which was visualized and quantified by 19F MRI. The efficacy pattern with linezolid being more efficient in clearing bacterial infection was shown similarly by all three methods. In consequence, 19F MRI with perfluorocarbon emulsion as MR tracer proved to be capable to visualize antibacterial therapy in preclinical testing models. The next step was consequently to evaluate a promising new compound against S. aureus infections. Thus, lysostaphin, an endo-peptidase that cleaves the cell wall of S. aureus, was tested in different concentrations alone or in combination with oxacillin for efficacy in murine thigh and catheter associated infection models. Lysostaphin only in the concentration of 5 mg/kg body weight or combined with oxacillin in the concentration of 2 mg/kg showed strong reduction of bacterial burden by colony forming unit determination and bioluminescence imaging in both models. The perfluorocarbon accumulation was investigated in the thigh infection model by 19F MRI and was strongly reduced in terms of volume and signal strength in both above-mentioned groups. In general, lysostaphin showed comparable or superior efficacy than vancomycin or oxacillin alone. Therefore, further development of lysostaphin for the treatment of S. aureus infections is recommended by these experiments. Overall, the antibiotic efficacy pattern of all applied antibiotic regimens was similar with all three applied methods, demonstrating the usefulness of MRI for antibiotic efficacy testing. Importantly, treatment with oxacillin either alone or in combination with lysostaphin resulted in stronger perfluorocarbon emulsion accumulation at the site of infection than expected compared to the results from bioluminescence imaging and colony forming unit determination. This might be an indication for immunomodulatory properties of oxacillin. Further murine infection experiments demonstrated in this context a differential release of cytokine and chemokines in the infected thigh muscle in dependence of the applied antibacterial therapy. Especially treatment with oxacillin, but to a less degree with minocycline or linezolid, too, exhibited high levels of various cytokines and chemokines, although they reduced the bacterial burden efficiently. In consequence, possible immunomodulatory effects of antibacterial compounds have to be taken into account for future applications of imaging platforms relying on the visualization of the immune response. However, this observation opens a new field for these imaging modalities since it might be extraordinary interesting to study the immunomodulatory effects of compounds or even bacterial factors in vivo. And finally, a two modality imaging platform which combines methods to visualize on the one hand the bacterial burden and on the other hand the immune response offers an innovative, new platform to study host-pathogen interaction in vivo in a non-invasive fashion. In summary, it could be shown that perfluorocarbon emulsions accumulate in immune cells at the site of infection in the murine S. aureus thigh infection model. The accumulation pattern shapes a 'hollow sphere' at the rim of the abscess area and its size and perfluorocarbon content is dependent on the severity of disease and/or efficacy of antibiotic therapy. Thus, 19F MRI with perfluorocarbon emulsions is a useful imaging modality to visualize sites and course of infection as well as to evaluate promising antibacterial drug candidates. Furthermore, since the accumulation of tracer depends on immune cells, it might be additionally interesting for studies regarding the immune response to infections, auto-immune diseases or cancer, but also to investigate the efficacy of immunomodulatory compounds and immunization.},
  subject      = {Staphylococcus aureus},
  language  = {en}
}
@phdthesis{Pfitzner2019,
  author    = {Pfitzner, Christian},
  title     = {Visual Human Body Weight Estimation with Focus on Clinical Applications},
  isbn      = {978-3-945459-27-0 (online)},
  doi       = {10.25972/OPUS-17484},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-174842},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2019},
  abstract  = {It is the aim of this thesis to present a visual body weight estimation, which is suitable for medical applications. A typical scenario where the estimation of the body weight is essential, is the emergency treatment of stroke patients: In case of an ischemic stroke, the patient has to receive a body weight adapted drug, to solve a blood clot in a vessel. The accuracy of the estimated weight influences the outcome of the therapy directly. However, the treatment has to start as early as possible after the arrival at a trauma room, to provide sufficient treatment. Weighing a patient takes time, and the patient has to be moved. Furthermore, patients are often not able to communicate a value for their body weight due to their stroke symptoms. Therefore, it is state of the art that physicians guess the body weight. A patient receiving a too low dose has an increased risk that the blood clot does not dissolve and brain tissue is permanently damaged. Today, about one-third gets an insufficient dosage. In contrast to that, an overdose can cause bleedings and further complications. Physicians are aware of this issue, but a reliable alternative is missing. The thesis presents state-of-the-art principles and devices for the measurement and estimation of body weight in the context of medical applications. While scales are common and available at a hospital, the process of weighing takes too long and can hardly be integrated into the process of stroke treatment. Sensor systems and algorithms are presented in the section for related work and provide an overview of different approaches. The here presented system -- called Libra3D -- consists of a computer installed in a real trauma room, as well as visual sensors integrated into the ceiling. For the estimation of the body weight, the patient is on a stretcher which is placed in the field of view of the sensors. The three sensors -- two RGB-D and a thermal camera -- are calibrated intrinsically and extrinsically. Also, algorithms for sensor fusion are presented to align the data from all sensors which is the base for a reliable segmentation of the patient. A combination of state-of-the-art image and point cloud algorithms is used to localize the patient on the stretcher. The challenges in the scenario with the patient on the bed is the dynamic environment, including other people or medical devices in the field of view. After the successful segmentation, a set of hand-crafted features is extracted from the patient's point cloud. These features rely on geometric and statistical values and provide a robust input to a subsequent machine learning approach. The final estimation is done with a previously trained artificial neural network. The experiment section offers different configurations of the previously extracted feature vector. Additionally, the here presented approach is compared to state-of-the-art methods; the patient's own assessment, the physician's guess, and an anthropometric estimation. Besides the patient's own estimation, Libra3D outperforms all state-of-the-art estimation methods: 95 percent of all patients are estimated with a relative error of less than 10 percent to ground truth body weight. It takes only a minimal amount of time for the measurement, and the approach can easily be integrated into the treatment of stroke patients, while physicians are not hindered. Furthermore, the section for experiments demonstrates two additional applications: The extracted features can also be used to estimate the body weight of people standing, or even walking in front of a 3D camera. Also, it is possible to determine or classify the BMI of a subject on a stretcher. A potential application for this approach is the reduction of the radiation dose of patients being exposed to X-rays during a CT examination. During the time of this thesis, several data sets were recorded. These data sets contain the ground truth body weight, as well as the data from the sensors. They are available for the collaboration in the field of body weight estimation for medical applications.},
  subject      = {Punktwolke},
  language  = {en}
}
@phdthesis{Sareen2011,
  author    = {Sareen, Preeti},
  title     = {Visual attention in Drosophila melanogaster},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-69616},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2011},
  abstract  = {There is such vast amount of visual information in our surroundings at any time that filtering out the important information for further processing is a basic requirement for any visual system. This is accomplished by deploying attention to focus on one source of sensory inputs to the exclusion of others (Luck and Mangun 2009). Attention has been studied extensively in humans and non human primates (NHPs). In Drosophila, visual attention was first demonstrated in 1980 (Wolf and Heisenberg 1980) but this field remained largely unexplored until recently. Lately, however, studies have emerged that hypothesize the role of attention in several behaviors but do not specify the characteristic properties of attention. So, the aim of this research was to characterize the phenomenon of visual attention in wild-type Drosophila, including both externally cued and covert attention using tethered flight at a torque meter. Development of systematic quantifiable behavioral tests was a key aspect for this which was not only important for analyzing the behavior of a population of wild-type flies but also for comparing the wild-type flies with mutant flies. The latter would help understand the molecular, genetic, and neuronal bases of attention. Since Drosophila provides handy genetic tools, a model of attention in Drosophila will serve to the greater questions about the neuronal circuitry and mechanisms involved which might be analogous to those in primates. Such a model might later be used in research involving disorders of attention. Attention can be guided to a certain location in the visual field by the use of external cues. Here, using visual cues the attention of the fly was directed to one or the other of the two visual half-fields. A simple yet robust paradigm was designed with which the results were easily quantifiable. This paradigm helped discover several interesting properties of the cued attention, the most substantial one being that this kind of external guidance of attention is restricted to the lower part of the fly's visual field. The guiding cue had an after-effect, i.e. it could occur at least up to 2 seconds before the test and still bias it. The cue could also be spatially separated from the test by at least 20° and yet attract the attention although the extent of the focus of attention (FoA) was smaller than one lower visual half-field. These observations excluded the possibility of any kind of interference between the test and the cue stimuli. Another interesting observation was the essentiality of continuous visibility of the test stimulus but not the cue for effective cuing. When the contrast of the visual scene was inverted, differences in response frequencies and cuing effects were observed. Syndirectional yaw torque responses became more frequent than the antidirectional responses and cuing was no longer effective in the lower visual field with inverted contrast. Interestingly, the test stimulus with simultaneous displacement of two stripes not only effectuated a phasic yaw torque response but also a landing response. A 50 landing response was produced in more than half of the cases whenever a yaw torque response was produced. Elucidation of the neuronal correlates of the cued attention was commenced. Pilot experiments with hydroxyurea (HU) treated flies showed that mushroom bodies were not required for the kind of guidance of attention tested in this study. Dopamine mutants were also tested for the guidance of attention in the lower visual field. Surprisingly, TH-Gal4/UAS-shits1 flies flew like wild-type flies and also showed normal optomotor response during the initial calibration phase of the experiment but did not show any phasic yaw torque or landing response at 18 °C, 25 °C or 30 °C. dumb2 flies that have almost no D1 dopamine receptor dDA1 expression in the mushroom bodies and the central complex (Kim et al. 2007) were also tested and like THGal4/ UAS-shits1 flies did not show any phasic yaw torque or landing response. Since the dopamine mutants did not show the basic yaw torque response for the test the role of dopamine in attention could not be deduced. A different paradigm would be needed to test these mutants. Not only can attention be guided through external cues, it can also be shifted endogenously (covert attention). Experiments with the windows having oscillating stripes nicely demonstrated the phenomenon of covert attention due to the production of a characteristic yaw torque pattern by the flies. However, the results were not easily quantifiable and reproducible thereby calling for a more systematic approach. Experiments with simultaneous opposing displacements of two stripes provide a promising avenue as the results from these experiments showed that the flies had a higher tendency to deliver one type of response than when the responses would be produced stochastically suggesting that attention increased this tendency. Further experiments and analysis of such experiments could shed more light on the mechanisms of covert attention in flies.},
  subject      = {Visuelle Aufmerksamkeit},
  language  = {en}
}
@phdthesis{Grossekathoefer2022,
  author    = {Großekath{\"o}fer, Jonas David},
  title     = {Virtually Valid? On the Importance of Ecological Validity and Virtual Reality for Social Attention Research},
  doi       = {10.25972/OPUS-26041},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-260417},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Gazes are of central relevance for people. They are crucial for navigating the world and communicating with others. Nevertheless, research in recent years shows that many findings from experimental research on gaze behavior cannot be transferred from the laboratory to everyday behavior. For example, the frequency with which conspecifics are looked at is considerably higher in experimental contexts than what can be observed in daily behavior. In short: findings from laboratories cannot be generalized into general statements. This thesis is dedicated to this matter. The dissertation describes and documents the current state of research on social attention through a literature review, including a meta-analysis on the /gaze cueing/ paradigm and an empirical study on the robustness of gaze following behavior. In addition, virtual reality was used in one of the first studies in this research field. Virtual reality has the potential to significantly improve the transferability of experimental laboratory studies to everyday behavior. This is because the technology enables a high degree of experimental control in naturalistic research designs. As such, it has the potential to transform empirical research in the same way that the introduction of computers to psychological research did some 50 years ago. The general literature review on social attention is extended to the classic /gaze cueing/ paradigm through a systematic review of publications and a meta-analytic evaluation (Study 1). The cumulative evidence supported the findings of primary studies: Covert spatial attention is directed by faces. However, the experimental factors included do not explain the surprisingly large variance in the published results. Thus, there seem to be further, not well-understood variables influencing these social processes. Moreover, classic /gaze cueing/ studies have limited ecological validity. This is discussed as a central reason for the lack of generalisability. Ecological validity describes the correspondence between experimental factors and realistic situations. A stimulus or an experimental design can have high and low ecological validity on different dimensions and have different influences on behavior. Empirical research on gaze following behavior showed that the /gaze cueing/ effect also occurs with contextually embedded stimuli (Study 2). The contextual integration of the directional cue contrasted classical /gaze cueing/ studies, which usually show heads in isolation. The research results can thus be transferred /within/ laboratory studies to higher ecologically valid research paradigms. However, research shows that the lack of ecological validity in experimental designs significantly limits the transferability of experimental findings to complex situations /outside/ the laboratory. This seems to be particularly the case when social interactions and norms are investigated. However, ecological validity is also often limited in these studies for other factors, such as contextual embedding /of participants/, free exploration behavior (and, thus, attentional control), or multimodality. In a first study, such high ecological validity was achieved for these factors with virtual reality, which could not be achieved in the laboratory so far (Study 3). Notably, the observed fixation patterns showed differences even under /most similar/ conditions in the laboratory and natural environments. Interestingly, these were similar to findings also derived from comparisons of eye movement in the laboratory and field investigations. These findings, which previously came from hardly comparable groups, were thus confirmed by the present Study 3 (which did not have this limitation). Overall, /virtual reality/ is a new technical approach to contemporary social attention research that pushes the boundaries of previous experimental research. The traditional trade-off between ecological validity and experimental control thus becomes obsolete, and laboratory studies can closely inherit an excellent approximation of reality. Finally, the present work describes and discusses the possibilities of this technology and its practical implementation. Within this context, the extent to which this development can still guarantee a constructive classification of different laboratory tests in the future is examined.},
  subject      = {Aufmerksamkeit},
  language  = {en}
}
@phdthesis{Pinzner2021,
  author    = {Pinzner, Florian},
  title     = {Vicinal and Double Chemoselective Biofunctionalization of Polyoxazolines},
  doi       = {10.25972/OPUS-22975},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-229758},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {In this work, a toolbox was provided to create three-component polymer conjugates with a defined architecture, designed to bear different biocomponents that can interact with larger biological systems in biomacromolecular recognition experiments. The target architecture is the attachment of two biomolecule 'arms' to the alpha telechelic end point of a polymer and fixating the conjugate to the gold surface of SAW and SPR sensor chips with the polymer's other omega chain end. This specific design of a conjugate will be implemented by using a strategy to yield novel double alpha as well as omega telechelic functionalized POx and the success of all cascade reaction steps leading to the final conjugation product will be proven through affinity measurements between covalently bound mannose and ConA. All reactions were performed on a low molecular model level first and then transferred to telechelic and also side chain functionalized polymer systems.},
  subject      = {Polyoxazoline},
  language  = {en}
}
@phdthesis{Huebner2010,
  author    = {H{\"u}bner, Dominique},
  title     = {Vibronic and electronic excitations of large organic molecules in gas and condensed phase},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-66043},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {In the frame of this thesis vibronic and electronic states of organic molecules have been examined. A central question is the interaction within and between the molecules in thin films and at metal-organic interfaces. The main experimental tools were high resolution electron energy loss spectroscopy (HREELS) and high resolution near edge X-ray absortion fine structure (NEXFAS). The electronic and vibronic structure of thin NTCDA films was examined with low energy electrons as probe, i.e. HREELS. The spectra of the electronic excited molecular orbitals of submonolayer NTCDA on a Ag(111) shows a partially filled orbital. The interaction between this orbital and the total symetric molecular vibrations leads to the typical Fano peak profiles which are seen in the vibrational spectra. The sub-monolayer superstructure can be driven to a phase transition into an disordered phase upon cooling, which is also seen in the electronic and vibronic excitation spectra. Multilayers show flat lying or upright standing molecules as a function of the preparation conditions. The upright standing molecules show an island growth mode, where the islands are well ordered and exhibit a structure in diffraction experiments which can be attributed to the molecular crystal structure. In order to examine the order in more detail various thin films were examined using SPALEED as function of film thickness and preparation parameters. In case of a low temperature substrate no long range order leading to a diffraction pattern was found. In contrast growth on room temperature substrates leads to island growth of films in a structure of the molecular crystal, where two preferred orientations of the islands relative to the substrate were found. In case of thick films the reference to the substrate gets lost and the molecular crystals grow with a defined crystal direction with respect to the surface but with an arbitrary azimuthal orientation leading to circles in the diffraction pattern. NTCDA monolayers on a Ag(111) surface using HREELS as a tool were examined. The electronic excitation spectra reveal a partially filled molecular orbital which is strongly shifted compared to the multilayer. The existence of this state is responsible for the activation of normally forbidden Ag modes in the vibrational spectra. Due to the electron phonon coupling these modes exhibit a Fano like peak shape. Cooling a monolayer leads to a phase transition with strong changes in the spectroscopic features both in electronic and vibronic excitations. In case of the molecule ANQ the intramolecular interaction was examined. In the oxygen NEXAFS spectra a vibronic fine structure is found, which leads to the conclusion that asymmetric potentials are involved. It is an interesting question if the fundamental vibration is has C-H or C=O character. In order to address this question spectra of condensed and gas phase ANQ were compared to an ANQ derivate (ANQ- Br\$_2\$Cl\$_2\$), with the conclusion that the coupling is most likely to a C=O mode. High resolution C1s spectra of hydrogenated and fully deuterated naphthalene both in gas and condensed phase have been presented. Depending on the final state orbital distinct differences have been found between gas and condensed phase. A energetic shift of resonances (Res. B, C, D) is interpreted as effect of \$\pi\$-\$\pi\$ interaction in the condensed phase. This is especially notable for resonance B which is undoubtly assigned to an excitation into a \$\pi^*\$ orbital. The results lead to an interpretation, that for organic molecular crystals more than pure van-derWaals interaction has to be taken into account. In summary it is found that the intramolecular interaction in NEXAFS spectra is preferentially coupled to one or a few vibronic progressions. Due to the delocalized electronic system maybe even states which are not spatially near the core excited atom can be involved. It could be shown that a condensation of the molecules in thin films leads to changes within the spectra. The influence the intermolecular interaction can be clearly seen in this finding, where additional hints are found that more than mere van-der-Waals binding has to be taken into account.},
  subject      = {Organisches Molek{\"u}l},
  language  = {en}
}
@phdthesis{Pavel2003,
  author    = {Pavel, Ioana-Emilia},
  title     = {Vibrational spectroscopy and density functional theory calculations, a powerful approach for the characterization of pharmaceuticals and new organometallic complexes},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-7186},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2003},
  abstract  = {In the current work, several well-known pharmaceuticals (1,4-dihydrazinophthalazine sulfate, caffeine, and papaverine hydrochloride) and new organometallic compounds (nickel(II) cupferronato complexes NiL2An, L = PhN2O2-, n = 1, A = o-phenanthroline (1), o,o'-bipyridine (2) and n = 2, A = H2O (3), o-NH2Py (4), o-C6H4(NH2)2 (5); silylene-bridged dinuclear iron complexes [Cp(OC)2Fe]2SiX2 (X = H (6), F (7), Cl (8), Br (9), I (10)); 3-silaoxetane 3,3-dimethyl-2,2,4,4-tetraphenyl-1-oxa-3-silacyclobutane (11) and 3-silathietane 3,3-dimethyl-2,2,4,4-tetraphenyl-1-sila-3-thiacyclobutane (12) compounds), which have successfully been characterized by using vibrational spectroscopy in conjunction with accurate density functional theory (DFT) calculations, are presented. The DFT computed molecular geometries of the species of interest reproduced the crystal structure data very well and in conjunction with IR and Raman measurements helped us to clarify the structures of the compounds, for which no experimental data were available; and this, especially for the new organometallic compounds, where the X-Ray analysis was limited by the non-availability of single crystals (3, 5, 10). Furthermore, a natural population analysis (NPA) and natural bond orbital (NBO) calculations together with a detailed analysis of the IR and Raman experimental as well as calculated spectra of the new organometallic compounds, allowed us to study some special bonding situations (1-12) or to monitor the structural changes observed with the change in temperature during the Raman experiments (11, 12). By combining these two methods (DFT and vibrational spectroscopy), the auspicious results obtained on the organometallic compounds 6-12 and overall in literature, made us confident of the power of theoretical calculations in aiding the interpretation of rich SERS spectra by solving some interesting issues. Consequently, the Raman and SERS spectra of well-known pharmaceuticals (1,4-dihydrazinophthalazine sulfate, caffeine, and papaverine hydrochloride) or new potentially biological active organometallic complexes (1-5), that were synthetized by our coworkers, were discussed with the assistance of the accurate results obtained from DFT calculations (structural parameters, harmonic vibrational wavenumbers, Raman scattering activities), and many previous incomplete assignments have been analyzed and improved. This allowed us to establish the vibrational behavior of these biological compounds near a biological artificial model at different pH values or concentrations (Ag substrate), taking into account that information about the species present under particular conditions could be of great importance for the interpretation of biochemical processes. The total electron density of molecules and the partial charges situated on selected atoms, which were determined theoretically by NPA, allowed us to establish the probability of different atoms acting as an adsorptive site for the metal surface. Moreover, a closer examination of the calculated orbitals of molecules brought further arguments on the presence or absence of the photoproducts at the Ag surface during the irradiation (1,4-dihydrazinophthalazine sulfate). Overall, the results provide a benchmark illustration of the virtues of DFT in aiding the interpretation of rich vibrational spectra attainable for larger polyatomic adsorbates by using SERS, as well as in furnishing detailed insight into the relation between the vibrational properties and the nature of the Ag substrate-adsorbate bonding. Therefore, we strongly believe that theoretical calculations will become a matter of rapidly growing scientific and practical interest in SERS.},
  subject      = {Arzneimittel},
  language  = {en}
}
@phdthesis{Peica2006,
  author    = {Peica, Niculina},
  title     = {Vibrational spectroscopy and density functional theory calculations on biological molecules},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-20913},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2006},
  abstract  = {Infrared (IR) and Raman spectroscopy are among the most widely used techniques in the physical and natural sciences today. Vibrational spectroscopy, including IR and Raman spectroscopy, has both a long and interesting history and an illustrious record of contributions to science. Spectroscopy in the pharmaceutical industry is dominated by techniques such as nuclear magnetic resonance (NMR) and mass spectrometry (MS) for the elucidation of chemical structures. Despite this, the versatility of infrared spectroscopy ensures it still remains a key technique in quality control laboratories, and in applications where solid form characterization or minimal sample preparation is a necessity. Raman spectroscopy has many uses in the pharmaceutical and chemical industry, but its strengths is in solid form analysis. It is regularly used to identify compounds, and results are used in the release of pharmaceutical and chemical products. This work consists of 8 chapters, which cover the vibrational spectroscopy beginning with the theory and instrumentation, continuing with the experimental setup and probes description, and completing with results and discussions of the experiments. The first chapter of this work introduces Raman spectroscopy as a dominant technique used in pharmaceutical and chemical industry. The theoretical background regarding vibrational spectroscopy (IR and Raman) is accounted for in the second chapter of this work, while the samples presentation, the experimental procedures, and the description of the apparatus together with the computational details are briefly specified in the third chapter. The fourth chapter investigates the concentration dependent wavenumber shifts and linewidth changes of tetrahydrofuran in a binary system. Many of the applications in food science rely heavily on Raman spectroscopy, often preceding the biomedical applications. The characterization and identification of food additives using Raman, surface-enhanced Raman spectroscopy, and theoretical calculations is in detail depicted in the fifth chapter, whereas in the sixth and seventh chapters the monitoring of several medicines and various lanthanide complexes with anticancer properties, respectively, employing IR and Raman techniques are treated. These last two chapters address applications of vibrational spectroscopy to pharmaceutical products, and include the use of vibrational spectroscopy in combinatorial chemistry and density functional theory, a modality increasingly used by the pharmaceutical industry for the discovery if new pharmacologically active substances.},
  subject      = {Schwingungsspektroskopie},
  language  = {en}
}
@phdthesis{Bolboaca2002,
  author    = {Bolboaca, Monica-Maria},
  title     = {Vibrational characterisation of coordination and biologically active compounds by means of IR absorption, Raman and surface-enhanced Raman spectroscopy in combination with theoretical simulations},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-4616},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2002},
  abstract  = {The thesis contains two major parts. The first part deals with structural investigations on different coordination compounds performed by using infrared absorption and FT-Raman spectroscopy in combination with density functional theory calculations. In the first section of this part the starting materials Ph2P-N(H)SiMe3 and Ph3P=NSiMe3 and their corresponding [(MeSi)2NZnPh2P-NSiMe3]2 and Li(o-C6H4PPh2NSiMe3)]2·Et2O complexes have been investigated in order to determine the influence of the metal coordination on the P-N bond length. In the next section the vibrational spectra of four hexacoordinated silicon(IV) and germanium(IV) complexes with three symmetrical bidentate oxalato(2-) ligands have been elucidated. Kinetic investigations of the hydrolysis of two of them, one with silicon and another one with germanium, have been carried out at room temperature and at different pH values and it was observed that the hydrolysis reaction occurs only for the silicon compound, the fastest reaction taking place at acidic pH. In the last section of this part, the geometric configurations of some hexacoordinated silicon(IV) complexes with three unsymmetrical bidentate hydroximato(2-) ligands have been determined. The second part of the thesis contains vibrational investigations of some biologically active molecules performed by means of Raman spectroscopy together with theoretical simulations. The SER spectra of these molecules at different pH values have also been analysed and the adsorption behaviour on the metal surface as well as the influence of the pH on the molecule-substrate interaction have been established.},
  subject      = {Komplexe},
  language  = {en}
}
@phdthesis{Schmitt2007,
  author    = {Schmitt, Susanne},
  title     = {Vertical microbial transmission in Caribbean bacteriosponges},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-23621},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2007},
  abstract  = {Bakterienhaltige Schw{\"a}mme sind durch große Mengen an morphologisch und phylogenetisch unterschiedlichen Mikroorganismen im Mesohyl gekennzeichnet. Diese mikrobiellen Konsortien sind permanent, stabil und hoch-spezifisch mit den Wirts-Schw{\"a}mmen assoziiert. {\"U}ber die Entstehung und die Aufrechterhaltung dieser Assoziation ist jedoch wenig bekannt. Es war das erste Ziel dieser Doktorarbeit, Co-Speziation zwischen mediterranen und karibischen Schw{\"a}mmen der Gattung Aplysina und assoziierten Cyanobakterien zu untersuchen. Die Wirtsphylogenie wurde sowohl mit 18S rDNA als auch mit ITS-2 Sequenzen erstellt. Das Alignment basierte auf der Sekund{\"a}rstruktur des jeweiligen molekularen Markers und jeder phylogenetische Stammbaum wurde mit 5 verschiedenen Algorithmen berechnet. Die Gattung Aplysina erschien monophyletisch. Die verschiedenen Arten konnten einer Karibik- und einer Mittelmeer-Gruppe zugeordnet werden und der Ursprung der Gattung Aplysina im Urmeer Tethys erscheint m{\"o}glich. Der Vergleich von Wirts- und Cyanobakterien-Phylogenie, welche auf 16S rDNA Sequenzen beruht, zeigte, dass die Topologie der Stammb{\"a}ume sich nicht spiegelbildlich gegen{\"u}bersteht. Es wird daher angenommen, dass keine Co-Speziation zwischen Aplysina Schw{\"a}mmen und Cyanobakterien und wahrscheinlich auch nicht mit anderen Schwamm-spezifischen Mikroorganismen vorliegt. Das zweite Ziel dieser Doktorarbeit war, die vertikale Weitergabe von Mikroorganismen {\"u}ber Reproduktionsstadien in Schw{\"a}mmen zu untersuchen. Eine umfangreiche elektronenmikroskopische Studie zeigte eine klare Korrelation, da bakterienhaltige Schw{\"a}mme immer auch unterschiedliche mikrobielle Morphotypen in den Reproduktionsstadien aufwiesen, wohingegen in den Reproduktionsstadien bakterienarmer Schw{\"a}mme keine Mikroorganismen gefunden wurden. Aus diesen Ergebnissen wird die Weitergabe des mikrobiellen Konsortiums {\"u}ber Reproduktionsstadien bakterienhaltiger Schw{\"a}mme geschlossen. Basierend auf den vorherigen Ergebnissen wurde Ircinia felix f{\"u}r eine detaillierte Dokumentation der vertikalen Weitergabe von Mikroorganismen ausgew{\"a}hlt. Elektronenmikroskopische Aufnahmen zeigten, dass die Larven von I. felix im zentralen Bereich große Mengen an extrazellul{\"a}ren Mikroorganismen enthielten w{\"a}hrend der {\"a}ußere Bereich nahezu frei von Mikroorganismen war. In I. felix Juvenilschw{\"a}mmen waren die Mikroorganismen zwischen eng gepackten Schwammzellen lokalisiert. Die mikrobiellen Profile von I. felix Adult, Larven und Juvenilen wurden mittels Denaturierender-Gradienten-Gel-Elektrophorese (DGGE) verglichen. {\"A}hnliche mikrobielle Diversit{\"a}tsmuster waren im Adultschwamm und den respektiven Larven vorhanden. Dies deutet darauf hin, dass ein großer Anteil des adulten mikrobiellen Konsortiums vertikal weitergegeben wird. Im Gegensatz dazu schienen die mikrobiellen Konsortien von Larven, die von unterschiedlichen Adultindividuen stammten, insgesamt variabler zu sein. Die Bandenmuster der Juvenilschw{\"a}mme waren eine Mischung aus Schwamm-spezifischen und Seewassermikroorganismen, was auf die Methodik der DNA-Extraktion zur{\"u}ckgef{\"u}hrt werden kann. Allerdings kann gesagt werden, dass mindestens die H{\"a}lfte des adulten mikrobiellen Konsortiums in der n{\"a}chsten Generation vorhanden war. Schließlich wurde eine umfangreiche phylogenetische Analyse mit Sequenzen aus Adultschw{\"a}mmen und Larven durchgef{\"u}hrt. Die Sequenzen wurden durch Sequenzierung von ausgeschnittenen DGGE-Banden der bakterienhaltigen Schw{\"a}mme Agelas wiedenmayeri, I. felix und Smenospongia aurea gewonnen. Zus{\"a}tzlich wurden bislang unver{\"o}ffentlichte Sequenzen aus den Schw{\"a}mmen Ectyoplasia ferox und Xestospongia muta verwendet, die im Labor erstellt worden waren. Die Identifizierung von 24 "vertical transmission clusters" in mindestens 8 verschiedenen, eubakteriellen Phyla zeigt, dass ein komplexes, aber einheitliches, mikrobielles Konsortium {\"u}ber die Reproduktionsstadien weitergegeben wird. Der Prozess der vertikalen Weitergabe ist spezifisch, da Mikroorganismen der bakterienhaltigen Schw{\"a}mme, nicht aber Seewasser-Mikroorganismen weitergegeben werden. Zugleich scheint der Prozess der vertikalen Weitergabe nicht selektiv zu sein, da keine Unterscheidung zwischen einzelnen, Schwamm-spezifischen Mikroorganismen erfolgt. Insgesamt deutet vertikale Weitergabe auf eine mutualistische und seit langem bestehende Assoziation zwischen bakterienhaltigen Schw{\"a}mmen und komplexen, mikrobiellen Konsortien hin.},
  language  = {en}
}
@phdthesis{Ramler2023,
  author    = {Ramler, Jacqueline},
  title     = {Versatile Use of Neutral and Cationic Diorgano Bismuth Compounds: Ligation of Transition Metals, Lewis Acidity, Low Valent Species and Catalysis},
  doi       = {10.25972/OPUS-24054},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-240547},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {In der vorliegenden Arbeit wurden Diorganobismut-Spezies hinsichtlich ihrer Eigenschaften als Liganden in {\"U}bergangsmetallkomplexen, ihrer Lewis-Azidit{\"a}t, ihrer Eignung als Katalysatoren und die Generierung niedervalenter Spezies untersucht.},
  subject      = {Bismut},
  language  = {en}
}
@phdthesis{Knauer2018,
  author    = {Knauer, Kim},
  title     = {Vegetation Dynamics in West Africa - Spatio-temporal Data Fusion for the Monitoring of Agricultural Expansion},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-164776},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2018},
  abstract  = {West Africa is one of the fastest growing regions in the world with annual population growth rates of more than three percent for several countries. Since the 1950s, West Africa experienced a fivefold increase of inhabitants, from 71 to 353 million people in 2015 and it is expected that the region's population will continue to grow to almost 800 million people by the year 2050. This strong trend has and will have serious consequences for food security since agricultural productivity is still on a comparatively low level in most countries of West Africa. In order to compensate for this low productivity, an expansion of agricultural areas is rapidly progressing. The mapping and monitoring of agricultural areas in West Africa is a difficult task even on the basis of remote sensing. The small scale extensive farming practices with a low level of agricultural inputs and mechanization make the delineation of cultivated land from other land cover and land use (LULC) types highly challenging. In addition, the frequent cloud coverage in the region considerably decreases the availability of earth observation datasets. For the accurate mapping of agricultural area in West Africa, high temporal as well as spatial resolution is necessary to delineate the small-sized fields and to obtain data from periods where different LULC types are distinguishable. However, such consistent time series are currently not available for West Africa. Thus, a spatio-temporal data fusion framework was developed in this thesis for the generation of high spatial and temporal resolution time series. Data fusion algorithms such as the Enhanced Spatial and Temporal Adaptive Reflectance Fusion Model (ESTARFM) enjoyed increasing popularity during recent years but they have hardly been used for the application on larger scales. In order to make it applicable for this purpose and to increase the input data availability, especially in cloud-prone areas such as West Africa, the ESTARFM framework was developed in this thesis introducing several enhancements. An automatic filling of cloud gaps was included in the framework in order to use even partly cloud-covered Landsat images for the fusion without producing gaps on the output images. In addition, the ESTARFM algorithm was improved to automatically account for regional differences in the heterogeneity of the study region. Further improvements comprise the automation of the time series generation as well as the significant acceleration of the processing speed through parallelization. The performance of the developed ESTARFM framework was tested by fusing an 8-day NDVI time series from Landsat and MODIS data for a focus area of 98,000 km² in the border region between Burkina Faso and Ghana. The results of this test show the capability of the ESTARFM framework to accurately produce high temporal resolution time series while maintaining the spatial detail, even in such a heterogeneous and cloud-prone region. The successfully tested framework was subsequently applied to generate consistent time series as the basis for the mapping of agricultural area in Burkina Faso for the years 2001, 2007, and 2014. In a first step, high temporal (8-day) and high spatial (30 m) resolution NDVI time series for the entire country and the three years were derived with the ESTARFM framework. More than 500 Landsat scenes and 3000 MODIS scenes were automatically processed for this purpose. From the fused ESTARFM NDVI time series, phenological metrics were extracted and together with the single time steps of NDVI served as input for the delineation of rainfed agricultural areas, irrigated agricultural areas and plantations. The classification was conducted with the random forest algorithm at a 30 m spatial resolution for entire Burkina Faso and the three years 2001, 2007, and 2014. For the training and validation of the classifier, a randomly sampled reference dataset was generated from Google Earth images based on expert knowledge of the region. The overall classification accuracies of 92\% (2001), 91\% (2007), and 91\% (2014) indicate the well-functioning of the developed methodology. The resulting maps show an expansion of agricultural area of 91\% from about 61,000 km² in 2001 to 116,900 km² in 2014. While rainfed agricultural areas account for the major part of this increase, irrigated areas and plantations also spread considerably. Especially the expansion of irrigation systems and plantation area can be explained by the promotion through various national and international development projects. The increase of agricultural areas goes in line with the rapid population growth in most of Burkina Faso's provinces which still had available land resources for an expansion of agricultural area. An analysis of the development of agricultural areas in the vicinity of protected areas highlighted the increased human pressure on these reserves. The protection of the remnant habitats for flora and fauna while at the same time improving food security for a rapidly growing population, are the major challenges for the region in the future. The developed ESTARFM framework showed great potential beyond its utilization for the mapping of agricultural area. Other large-scale research that requires a sufficiently high temporal and spatial resolution such as the monitoring of land degradation or the investigation of land surface phenology could greatly benefit from the application of this framework.},
  subject      = {Fernerkundung},
  language  = {en}
}
@phdthesis{Marquetand2007,
  author    = {Marquetand, Philipp},
  title     = {Vectorial properties and laser control of molecular dynamics},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-24697},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2007},
  abstract  = {In this work, the laser control of molecules was investigated theoretically. In doing so, emphasis was layed on entering vectorial properties and in particular the orientation in the laboratory frame. Therefore, the rotational degree of freedom had to be included in the quantum mechanical description. The coupled vibrational and rotational dynamics was examined, which is usually not done in coherent control theory. Local control theory was applied, where the field is determined from the dynamics of a system, which reacts with an instantaneous response to the perturbation and, in turn, determines the field again. Thus, the field is entangled with the quantum mechanical motion and the presented examples document, that this leads to an intuitive interpretation of the fields in terms of the underlying molecular dynamics. The limiting case of a classical treatment was shown to give similar results and hence, eases to understand the complicated structure of the control fields. In a different approach, the phase- and amplitude shaping of laser fields was systematically studied in the context of controlling population transfer in molecules.},
  subject      = {Laserchemie},
  language  = {en}
}
@phdthesis{Leikeim2022,
  author    = {Leikeim, Anna},
  title     = {Vascularization Strategies for Full-Thickness Skin Equivalents to Model Melanoma Progression},
  doi       = {10.25972/OPUS-27295},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-272956},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Malignant melanoma (MM) is the most dangerous type of skin cancer with rising incidences worldwide. Melanoma skin models can help to elucidate its causes and formation or to develop new treatment strategies. However, most of the current skin models lack a vasculature, limiting their functionality and applicability. MM relies on the vascular system for its own supply and for its dissemination to distant body sites via lymphatic and blood vessels. Thus, to accurately study MM progression, a functional vasculature is indispensable. To date, there are no vascularized skin models to study melanoma metastasis in vitro, which is why such studies still rely on animal experimentation. In the present thesis, two different approaches for the vascularization of skin models are employed with the aim to establish a vascularized 3D in vitro full-thickness skin equivalent (FTSE) that can serve as a test system for the investigation of the progression of MM. Initially, endothelial cells were incorporated in the dermal part of FTSEs. The optimal seeding density, a spheroid conformation of the cells and the cell culture medium were tested. A high cell density resulted in the formation of lumen-forming shapes distributed in the dermal part of the model. These capillary-like structures were proven to be of endothelial origin by staining for the endothelial cell marker CD31. The established vascularized FTSE (vFTSE) was characterized histologically after 4 weeks of culture, revealing an architecture similar to human skin in vivo with a stratified epidermis, separated from the dermal equivalent by a basement membrane indicated by collagen type IV. However, this random capillary-like network is not functional as it cannot be perfused. Therefore, the second vascularization approach focused on the generation of a perfusable tissue construct. A channel was molded within a collagen hydrogel and seeded with endothelial cells to mimic a central, perfusable vessel. The generation and the perfusion culture of the collagen hydrogel was enabled by the use of two custom-made, 3D printed bioreactors. Histological assessment of the hydrogels revealed the lining of the channel with a monolayer of endothelial cells, expressing the cell specific marker CD31. For the investigation of MM progression in vitro, a 3D melanoma skin equivalent was established. Melanoma cells were incorporated in the epidermal part of FTSEs, representing the native microenvironment of the tumor. Melanoma nests grew at the dermo-epidermal junction within the well stratified epidermis and were characterized by the expression of common melanoma markers. First experiments were conducted showing the feasibility of combining the melanoma model with the vFTSE, resulting in skin models with tumors at the dermo-epidermal junction and lumen-like structures in the dermis. Taken together, the models presented in this thesis provide further steps towards the establishment of a vascularized, perfusable melanoma model to study melanoma progression and metastasis.},
  subject      = {Tissue Engineering},
  language  = {en}
}
@phdthesis{Kleineisel2024,
  author    = {Kleineisel, Jonas},
  title     = {Variational networks in magnetic resonance imaging - Application to spiral cardiac MRI and investigations on image quality},
  doi       = {10.25972/OPUS-34737},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-347370},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {Acceleration is a central aim of clinical and technical research in magnetic resonance imaging (MRI) today, with the potential to increase robustness, accessibility and patient comfort, reduce cost, and enable entirely new kinds of examinations. A key component in this endeavor is image reconstruction, as most modern approaches build on advanced signal and image processing. Here, deep learning (DL)-based methods have recently shown considerable potential, with numerous publications demonstrating benefits for MRI reconstruction. However, these methods often come at the cost of an increased risk for subtle yet critical errors. Therefore, the aim of this thesis is to advance DL-based MRI reconstruction, while ensuring high quality and fidelity with measured data. A network architecture specifically suited for this purpose is the variational network (VN). To investigate the benefits these can bring to non-Cartesian cardiac imaging, the first part presents an application of VNs, which were specifically adapted to the reconstruction of accelerated spiral acquisitions. The proposed method is compared to a segmented exam, a U-Net and a compressed sensing (CS) model using qualitative and quantitative measures. While the U-Net performed poorly, the VN as well as the CS reconstruction showed good output quality. In functional cardiac imaging, the proposed real-time method with VN reconstruction substantially accelerates examinations over the gold-standard, from over 10 to just 1 minute. Clinical parameters agreed on average. Generally in MRI reconstruction, the assessment of image quality is complex, in particular for modern non-linear methods. Therefore, advanced techniques for precise evaluation of quality were subsequently demonstrated. With two distinct methods, resolution and amplification or suppression of noise are quantified locally in each pixel of a reconstruction. Using these, local maps of resolution and noise in parallel imaging (GRAPPA), CS, U-Net and VN reconstructions were determined for MR images of the brain. In the tested images, GRAPPA delivers uniform and ideal resolution, but amplifies noise noticeably. The other methods adapt their behavior to image structure, where different levels of local blurring were observed at edges compared to homogeneous areas, and noise was suppressed except at edges. Overall, VNs were found to combine a number of advantageous properties, including a good trade-off between resolution and noise, fast reconstruction times, and high overall image quality and fidelity of the produced output. Therefore, this network architecture seems highly promising for MRI reconstruction.},
  subject      = {Kernspintomografie},
  language  = {en}
}
@phdthesis{Forster2016,
  author    = {Forster, Johannes},
  title     = {Variational Approach to the Modeling and Analysis of Magnetoelastic Materials},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-147226},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2016},
  abstract  = {This doctoral thesis is concerned with the mathematical modeling of magnetoelastic materials and the analysis of PDE systems describing these materials and obtained from a variational approach. The purpose is to capture the behavior of elastic particles that are not only magnetic but exhibit a magnetic domain structure which is well described by the micromagnetic energy and the Landau-Lifshitz-Gilbert equation of the magnetization. The equation of motion for the material's velocity is derived in a continuum mechanical setting from an energy ansatz. In the modeling process, the focus is on the interplay between Lagrangian and Eulerian coordinate systems to combine elasticity and magnetism in one model without the assumption of small deformations. The resulting general PDE system is simplified using special assumptions. Existence of weak solutions is proved for two variants of the PDE system, one including gradient flow dynamics on the magnetization, and the other featuring the Landau-Lifshitz-Gilbert equation. The proof is based on a Galerkin method and a fixed point argument. The analysis of the PDE system with the Landau-Lifshitz-Gilbert equation uses a more involved approach to obtain weak solutions based on G. Carbou and P. Fabrie 2001.},
  subject      = {Magnetoelastizit{\"a}t},
  language  = {en}
}
@phdthesis{Christ2013,
  author    = {Christ, Thomas},
  title     = {Value-distribution of the Riemann zeta-function and related functions near the critical line},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-97763},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2013},
  abstract  = {The Riemann zeta-function forms a central object in multiplicative number theory; its value-distribution encodes deep arithmetic properties of the prime numbers. Here, a crucial role is assigned to the analytic behavior of the zeta-function on the so called critical line. In this thesis we study the value-distribution of the Riemann zeta-function near and on the critical line. Amongst others we focus on the following. PART I: A modified concept of universality, a-points near the critical line and a denseness conjecture attributed to Ramachandra. The critical line is a natural boundary of the Voronin-type universality property of the Riemann zeta-function. We modify Voronin's concept by adding a scaling factor to the vertical shifts that appear in Voronin's universality theorem and investigate whether this modified concept is appropriate to keep up a certain universality property of the Riemann zeta-function near and on the critical line. It turns out that it is mainly the functional equation of the Riemann zeta-function that restricts the set of functions which can be approximated by this modified concept around the critical line. Levinson showed that almost all a-points of the Riemann zeta-function lie in a certain funnel-shaped region around the critical line. We complement Levinson's result: Relying on arguments of the theory of normal families and the notion of filling discs, we detect a-points in this region which are very close to the critical line. According to a folklore conjecture (often attributed to Ramachandra) one expects that the values of the Riemann zeta-function on the critical line lie dense in the complex numbers. We show that there are certain curves which approach the critical line asymptotically and have the property that the values of the zeta-function on these curves are dense in the complex numbers. Many of our results in part I are independent of the Euler product representation of the Riemann zeta-function and apply for meromorphic functions that satisfy a Riemann-type functional equation in general. PART II: Discrete and continuous moments. The Lindel{\"o}f hypothesis deals with the growth behavior of the Riemann zeta-function on the critical line. Due to classical works by Hardy and Littlewood, the Lindel{\"o}f hypothesis can be reformulated in terms of power moments to the right of the critical line. Tanaka showed recently that the expected asymptotic formulas for these power moments are true in a certain measure-theoretical sense; roughly speaking he omits a set of Banach density zero from the path of integration of these moments. We provide a discrete and integrated version of Tanaka's result and extend it to a large class of Dirichlet series connected to the Riemann zeta-function.},
  subject      = {Riemannsche Zetafunktion},
  language  = {en}
}
@phdthesis{Koch2016,
  author    = {Koch, Julia Diana},
  title     = {Value Ranges for Schlicht Functions},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-144978},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2016},
  abstract  = {This thesis deals with value sets, i.e. the question of what the set of values that a set of functions can take in a prescribed point looks like. Interest in such problems has been around for a long time; a first answer was given by the Schwarz lemma in the 19th century, and soon various refinements were proven. Since the 1930s, a powerful method for solving such problems has been developed, namely Loewner theory. We make extensive use of this tool, as well as variation methods which go back to Schiffer to examine the following questions: We describe the set of values a schlicht normalised function on the unit disc with prescribed derivative at the origin can take by applying Pontryagin's maximum principle to the radial Loewner equation. We then determine the value ranges for the set of holomorphic, normalised, and bounded functions that have only real coefficients in their power series expansion around 0, and for the smaller set of functions which are additionally typically real. Furthermore, we describe the values a univalent self-mapping of the upper half-plane with hydrodynamical normalization which is symmetric with respect to the imaginary axis can take. Lastly, we give a necessary condition for a schlicht bounded function f on the unit disc to have extremal derivative in a point z where its value f(z) is fixed by using variation methods.},
  subject      = {Pontrjagin-Maximumprinzip},
  language  = {en}
}
@phdthesis{Hain2015,
  author    = {Hain, Johannes},
  title     = {Valuation Algorithms for Structural Models of Financial Networks},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-128108},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {The thesis focuses on the valuation of firms in a system context where cross-holdings of the firms in liabilities and equities are allowed and, therefore, systemic risk can be modeled on a structural level. A main property of such models is that for the determination of the firm values a pricing equilibrium has to be found. While there exists a small but growing amount of research on the existence and the uniqueness of such price equilibria, the literature is still somewhat inconsistent. An example for this fact is that different authors define the underlying financial system on differing ways. Moreover, only few articles pay intense attention on procedures to find the pricing equilibria. In the existing publications, the provided algorithms mainly reflect the individual authors' particular approach to the problem. Additionally, all existing methods do have the drawback of potentially infinite runtime. For these reasons, the objects of this thesis are as follows. First, a definition of a financial system is introduced in its most general form in Chapter 2. It is shown that under a fairly mild regularity condition the financial system has a unique existing payment equilibrium. In Chapter 3, some extensions and differing definitions of financial systems that exist in literature are presented and it is shown how these models can be embedded into the general model from the proceeding chapter. Second, an overview of existing valuation algorithms to find the equilibrium is given in Chapter 4, where the existing methods are generalized and their corresponding mathematical properties are highlighted. Third, a complete new class of valuation algorithms is developed in Chapter 4 that includes the additional information whether a firm is in default or solvent under a current payment vector. This results in procedures that are able find the solution of the system in a finite number of iteration steps. In Chapter 5, the developed concepts of Chapter 4 are applied to more general financial systems where more than one seniority level of debt is present. Chapter 6 develops optimal starting vectors for non-finite algorithms and Chapter 7 compares the existing and the new developed algorithms concerning their efficiency in an extensive simulation study covering a wide range of possible settings for financial systems.},
  subject      = {Risikomanagement},
  language  = {en}
}
@phdthesis{Lang2015,
  author    = {Lang, Melanie},
  title     = {Valence Shell Photoionization of Soot Precursors with Synchrotron Radiation},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-117038},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {A series of combustion relevant species like radicals, carbenes and polycyclic aromatic hydrocarbons were characterized in the gas phase by vacuum UV synchrotron radiation and their ionization energies (IE) and further spectroscopic details of the respective cations were retrieved from threshold photoelectron spectra. The reactive intermediates were generated by flash vacuum pyrolysis from stable precursor molecules. Furthermore three polycyclic aromatic hydrocarbons were investigated by threshold photoelectron spectroscopy, too. The experiment was performed at the VUV beamline of the Swiss Light Source in Villigen/Switzerland and the iPEPICO (imaging photoelectron photoion coincidence) setup was applied to correlate ions and electrons from the same ionization event. From the threshold photoelectron spectra and from quantum chemical computations the vibrational structure of the molecule cations and the geometry changes upon ionization were assigned. The ionization energies of the two C4H5 isomers 2-butyn-1-yl and 1-butyn-3-yl were assigned to 7.94±0.02 eV and 7.97±0.02 eV, respectively. The isomerization between the two isomers was computed to have a barrier of 2.20 eV, so a rearrangement between the two radicals cannot be excluded. From the threshold photoelectron spectra of the two constitutional C4H7 isomers 1-methylallyl and 2-methylallyl the ionization energies were assigned to 7.48±0.02 eV and to 7.59±0.02 eV for 1-E-methylallyl and 1-Z-methylallyl, as well as to 7.88±0.01 eV for 2-methylallyl. The two radicals 9-fluorenyl, C13H9, and benzhydryl, C13H11, were observed to ionize at 7.01±0.02 eV and 6.7 eV. The threshold photoelectron spectrum of benzhydryl also incorporated the signal of the diphenylmethyl carbene, C13H10, which has an IE at 6.8 eV. In addition, the head-to-head dimers of 9-fluorenyl and benzhydryl were observed as products in the pyrolysis. C26H18 has an IE at 7.69±0.04 eV and C26H22 has an IE at 8.13±0.04 eV. The three polycyclic aromatic hydrocarbon DHP (C14H16) 1-PEN (C18H22) and THCT (C22H16) were investigated in an effusive beam. The ionization energies were determined to IE(DHP)= 7.38±0.02 eV, IE(1-PEN)=7.58±0.05 eV and IE(THCT)=6.40±0.02 eV. Furthermore the thermal decomposition and the dissociative photoionization of diazomeldrum's acid was investigated. The pyrolysis products yielded beside several other products the two not yet (by photoelectron spectroscopy) characterized molecules E-formylketene, C3O2H2 and 2-diazoethenone, N2C2O. The dissociative photoionization showed the Wolff rearrangement to occur at higher internal energies.},
  subject      = {Ultraviolett-Photoelektronenspektroskopie},
  language  = {en}
}
@phdthesis{CamargoMolina2015,
  author    = {Camargo Molina, Jos{\´e} Eliel},
  title     = {Vacuum stability of models with many scalars},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112755},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {One of the most popular extensions of the SM is Supersymmetry (SUSY). It is a symmetry relating fermions and bosons and also the only feasible extension to the symmetries of spacetime. With SUSY it is then possible to explain some of the open questions left by the SM while at the same time opening the possibility of gauge unification at a high scale. SUSY theories require the addition of new particles, in particular an extra Higgs doublet and at least as many new scalars as fermions in the SM. Much in the same way that the Higgs boson breaks SU (2)L symmetry, these new scalars can break any symmetry for which they carry a charge through spontaneous symmetry breaking. Let us assume there is a local minimum of the potential that reproduces the correct phenomenol- ogy for a parameter point of a given model. By exploring whether there are other deeper minima with VEVs that break symmetries we want to conserve, like SU (3)C or U (1)EM , it is possible to exclude regions of parameter space where that happens. The local minimum with the correct phenomenology might still be metastable, so it is also necessary to calculate the probability of tunneling between minima. In this work we propose and apply a framework to constrain the parameter space of models with many scalars through the minimization of the one-loop eff e potential and the calculation of tunneling times at zero and non zero temperature.After a brief discussion about the shortcomings of the SM and an introduction of the basics of SUSY, we introduce the theory and numerical methods needed for a successful vacuum stability analysis. We then present Vevacious, a public code where we have implemented our proposed framework. Afterwards we go on to analyze three interesting examples. For the constrained MSSM (CMSSM) we explore the existence of charge- and color- breaking (CCB) minima and see how it constraints the phenomenological relevant region of its parameter space at T = 0. We show that the regions reproducing the correct Higgs mass and the correct relic density for dark matter all overlap with regions suffering from deeper CCB minima. Inspired by the results for the CMSSM, we then consider the natural MSSM and check the region of parameter space consistent with the correct Higgs mass against CCB minima at T /= 0. We find that regions of parameter space with CCB minima overlap significantly with that reproducing the correct Higgs mass. When thermal eff are considered the majority of such points are then found to have a desired symmetry breaking minimum with very low survival probability. In both these studies we find that analytical conditions presented in the literature fail in dis- criminating regions of parameter space with CCB minima. We also present a way of adapting our framework so that it runs quickly enough for use with parameter fit studies. Lastly we show a different example of using vacuum stability in a phenomenological study. For the BLSSM we investigate the violation of R-parity through sneutrino VEVs and where in parameter space does this happen. We find that previous analyses in literature fail to identify regions with R-parity conservation by comparing their results to our full numerical analysis.},
  subject      = {Supersymmetry},
  language  = {en}
}
@phdthesis{Huang2013,
  author    = {Huang, Ting},
  title     = {Vaccinia Virus-mediated Therapy of Solid Tumor Xenografts: Intra-tumoral Delivery of Therapeutic Antibodies},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-91327},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2013},
  abstract  = {Over the past 30 years, much effort and financial support have been invested in the fight against cancer, yet cancer still represents the leading cause of death in the world. Conventional therapies for treatment of cancer are predominantly directed against tumor cells. Recently however, new treatments options have paid more attention to exploiting the advantage of targeting the tumor stroma instead. Vaccinia virus (VACV) has played an important role in human medicine since the 18th century as a vaccination against smallpox. In our laboratory, the recombinant, replication-competent vaccinia virus, GLV-1h68, was shown to enter, colonize and destroy cancer cells both in cell culture, and in vivo, in xenograft models (Zhang, Yu et al. 2007). In addition, combined therapy of GLV-1h68 and anti-VEGF immunotherapy significantly enhanced antitumor therapy in vivo (Frentzen, Yu et al. 2009). In this study, we constructed several new recombinant VACVs carrying genes encoding different antibodies against fibroblast activation protein (FAP) in stroma (GLV-1h282), nanobody against the extracellular domain of epidermal growth factor receptor (EGFR, GLV-1h442) or antibodies targeting both vascular endothelial growth factor (VEGF) and EGFR (GLV-1h444) or targeting both VEGF and FAP (GLV-1h446). The expression of the recombinant proteins was first verified using protein analytical methods, SDS-gel electrophoresis, Western blot analysis, immunoprecipitation (IP) assays and ELISA assays. The proteins were detected after infection of the cells with the different VACVs and the recombinant proteins purified by affinity adsorption. The purified antibodies were shown to specifically bind to their respective antigens. Secondly, the infection and replication capability of all the virus strains was analyzed in cell culture using several human tumor cell lines (A549, FaDu or DU145), revealing that all the new recombinant VACVs were able to infect cancer cells with comparable efficiency to the parental viruses from which they were derived. Thirdly, the antitumor efficacy of the new recombinant VACVs was evaluated in vivo using several human cancer xenograft models in mice. In A549 and DU145 xenografts, the new recombinant VACVs exhibited an enhanced therapeutic efficacy compared to GLV-1h68 with no change in toxicity in mice. In the FaDu xenograft, treatment with GLV-1h282 (anti-FAP) significantly slowed down the speed of tumor growth compared to GLV-1h68. Additionally, treatment with the recombinant VACVs expressed the various antibodies achieved comparable or superior therapeutic effects compared to treatment with a combination of GLV-1h68 and the commercial therapeutic antibodies, Avastin, Erbitux or both. Next, the virus distribution in tumors and organs of treated mice was evaluated. For most of the viruses, the virus titer in tumors was not signficantly diffferent than GLV-1h68. However, for animals treated with GLV-1h282, the virus titer in tumors was significantly higher than with GLV-1h68. This may be the reason for enhanced antitumor efficacy of GLV-1h282 in vivo. Lastly, the underlying mechanisms of therapeutic antibody-enhanced antitumor effects were investigated by immunohistochemistry. Blood vessels density and cell proliferation in tumors were suppressed after treatment with the antibody-encoded VACVs. The results indicated that the suppression of angiogenesis or cell proliferation in tumors may cause the observed therapeutic effect. In conclusion, the results of the studies presented here support the hypothesis that the treatment of solid tumors with a combination of oncolytic virotherapy and immunotherapy has an additive effect over each treatment alone. Moreover, expression of the immunotherapeutic antibody by the oncolytic VACV locally in the tumor enhances the antitumor effect over systemic treatment with the same antibody. Combined, these results indicate that therapy with oncolytic VACVs expressing-therapeutic antibodies may be a promising approach for the treatment of cancer.},
  subject      = {Vaccinia-Virus},
  language  = {en}
}
@phdthesis{Geissinger2010,
  author    = {Geissinger, Ulrike},
  title     = {Vaccinia Virus-mediated MR Imaging of Tumors in Mice: Overexpression of Iron-binding Proteins in Colonized Xenografts},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-48099},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Vaccinia virus plays an important role in human medicine and molecular biology ever since the 18th century after E. Jenner discovered its value as a vaccination virus against smallpox. After the successful eradication of smallpox, vaccinia virus, apart from its use as a vaccine carrier, is today mainly used as a viral vector in molecular biology and increasingly in cancer therapy. The capability to specifically target and destroy cancer cells makes it a perfect agent for oncolytic virotherapy. Furthermore, the virus can easily be modified by inserting genes encoding therapeutic or diagnostic proteins to be expressed within the tumor. The emphasis in this study was the diagnosis of tumors using different vaccinia virus strains. Viruses with metal-accumulating capabilities for tumor detection via MRI technology were generated and tested for their usefulness in cell culture and in vivo. The virus strains GLV-1h131, GLV-1h132, and GLV-1h133 carry the gene encoding the two subunits of the iron storage protein ferritin under the control of three different promoters. GLV-1h110, GLV-1h111, and GLV-1h112 encode the bacterial iron storage protein bacterioferritin, whereas GLV-1h113 encodes the codon-optimized version of bacterioferritin for more efficient expression in human cells. GLV-1h22 contains the transferrin receptor gene, which plays an important role in iron uptake, and GLV-1h114 and GLV-1h115 contain the murine transferrin receptor gene. For possibly better iron uptake the virus strains GLV-1h154, GLV-1h155, GLV-1h156, and GLV-1h157 were generated, each with a version of a ferritin gene and a transferrin receptor gene. GLV-1h154 carries the genes that encode bacterioferritin and human transferrin receptor, GLV-1h155 the human ferritin H-chain gene and the human transferrin receptor gene. GLV-1h156 and GLV-1h157 infected cells both express the mouse transferrin receptor and bacterioferritin or human ferritin H-chain, respectively. The virus strains GLV-1h186 and GLV-1h187 were generated to contain a mutated form of the ferritin light chain, which was shown to result in iron overload and the wildtype light chain gene, respectively. The gene encoding the Divalent Metal Transporter 1, which is a major protein in the uptake of iron, was inserted in the virus strain GLV-1h102. The virus strain GLV-1h184 contains the magA gene of the magnetotactic bacterium Magnetospirillum magnetotacticum, which produces magnetic nanoparticles for orientation in the earth's magnetic field. Initially the infection and replication capability of all the virus strains were analyzed and compared to that of the parental virus strain GLV-1h68, revealing that all the viruses were able to infect cells of the human cancer cell lines A549 and GI-101A. All constructs exhibited a course of infection comparable to that of GLV-1h68. Next, to investigate the expression of the foreign proteins in GI-101A and A549 cells with protein analytical methods, SDS-gelelectrophoresis, Western blots and ELISAs were performed. The proteins, which were expressed under the control of the strong promoters, could be detected using these methods. To be able to successfully detect the protein expression of MagA and DMT1, which were expressed under the control of the weak promoter, the more sensitive method RT-PCR was used to at least confirm the transcription of the inserted genes. The determination of the iron content in infected GI-101A and A549 cells showed that infection with all used virus strains led to iron accumulation in comparison to uninfected cells, even infection with the parental virus strain GLV-1h68. The synthetic phytochelatin EC20 was also shown to enhance the accumulation of different heavy metals in bacterial cultures. In vivo experiments with A549 tumor-bearing athymic nude mice revealed that 24 days post infection virus particles were found mainly in the tumor. The virus-mediated expression of recombinant proteins in the tumors was detected successfully by Western blot. Iron accumulation in tumor lysates was investigated by using the ferrozine assay and led to the result that GLV-1h68-infected tumors had the highest iron content. Histological stainings confirmed the finding that iron accumulation was not a direct result of the insertion of genes encoding iron-accumulating proteins in the virus genome. Furthermore virus-injected tumorous mice were analyzed using MRI technology. Two different measurements were performed, the first scan being done with a seven Tesla small animal scanner seven days post infection whereas the second scan was performed using a three Tesla human scanner 21 days after virus injection. Tumors of mice injected with the virus strains GLV-1h113 and GLV-1h184 were shown to exhibit shortened T2 and T2* relaxation times, which indicates enhanced iron accumulation. In conclusion, the experiments in this study suggest that the bacterioferritin-encoding virus strain GLV-1h113 and the magA-encoding virus strain GLV-1h184 are promising candidates to be used for cancer imaging after further analyzation and optimization.},
  subject      = {Vaccinia-Virus},
  language  = {en}
}
@phdthesis{Hess2013,
  author    = {Heß, Michael},
  title     = {Vaccinia virus-encoded bacterial beta-glucuronidase as a diagnostic biomarker for oncolytic virotherapy},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-86789},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2013},
  abstract  = {Oncolytic virotherapy represents a promising approach to revolutionize cancer therapy. Several preclinical and clinical trials display the safety of oncolytic viruses as wells as their efficiency against solid tumors. The development of complementary diagnosis and monitoring concepts as well as the optimization of anti-tumor activity are key points of current virotherapy research. Within the framework of this thesis, the diagnostic and therapeutic prospects of beta-glucuronidase expressed by the oncolytic vaccinia virus strain GLV-1h68 were evaluated. In this regard, a beta-glucuronidase-based, therapy-accompanying biomarker test was established which is currently under clinical validation. By using fluorescent substrates, the activity of virally expressed beta-glucuronidase could be detected and quantified. Thereby conclusions about the replication kinetics of oncolytic viruses in animal models and virus-induced cancer cell lysis could be drawn. These findings finally led to the elaboration and establishment of a versatile biomarker assay which allows statements regarding the replication of oncolytic viruses in mice based on serum samples. Besides the analysis of retrospective conditions, this test is able to serve as therapy-accompanying monitoring tool for virotherapy approaches with beta-glucuronidase-expressing viruses. The newly developed assay also served as complement to routinely used plaque assays as well as reference for virally expressed anti-angiogenic antibodies in additional preclinical studies. Further validation of this biomarker test is currently taking place in the context of clinical trials with GL-ONC1 (clinical grade GLV-1h68) and has already shown promising preliminary results. It was furthermore demonstrated that fluorogenic substrates in combination with beta-glucuronidase expressed by oncolytic viruses facilitated the optical detection of solid tumors in preclinical models. In addition to diagnostic purposes, virus-encoded enzymes could also be combined with prodrugs resulting in an improved therapeutic outcome of oncolytic virotherapy. In further studies, the visualization of virus-induced immune reactions as well as the establishment of innovative concepts to improve the therapeutic outcome of oncolytic virotherapy could be accomplished. In conclusion, the results of this thesis provide crucial findings about the influence of virally expressed beta-glucuronidase on various diagnostic concepts in the context of oncolytic virotherapy. In addition, innovative monitoring and therapeutic strategies could be established. Our preclinical findings have important clinical influence, particularly by the development of a therapy-associated biomarker assay which is currently used in different clinical trials.},
  subject      = {Vaccinia-Virus},
  language  = {en}
}
@phdthesis{Nguyen2012,
  author    = {Nguyen, Hoang Duong},
  title     = {Vaccinia virus mediated expression of human erythropoietin in colonized human tumor xenografts results in faster tumor regression and increased red blood cell biogenesis in mice},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-85383},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {Cancer-related anemia is prevalent in cancer patients. Anemia negatively affects normal mental and physical function capacity with common symptoms s like fatigue, headache, or depression. Human erythropoietin (hEPO), a glycoprotein hormone regulating red blood cell formation, is approved for the treatment of cancer-related anemia. It has shown benefits in correcting anemia, and subsequently improving health-related quality of life and/or enhancing radio-, and chemotherapy. Several recent clinical trials have suggested that recombinant hEPO (rhEPO) may promote tumor growth that raises the questions concerning the safety of using rhEPO for cancer treatment. However in others, such effects were not indicated. As of today, the direct functional effect of rhEPO in tumor models remains controversial and needs to be further analyzed. Based on the GLV-1h68 backbone, the hEPO-expressing recombinant VACV strains (EPO-VACVs) GLV-1h210, GLV-1h211, GLV-1h212 and GLV-1h213 were generated by replacing the lacZ expression cassette at the J2R locus with hEPO under the control of different vaccinia promoters p7.5, pSE, pSEL, pSL, respectively. Also, GLV-1h209 was generated, which is similar to GLV-1h210 but expresses a mutated non-functinal EPO (R103A). The EPO-VACV strains were characterized for their oncolytic efficacy in lung (A549) cancer cells in culture and tumor xenografts. Concomitantly, the effects of locally expressed hEPO in tumors on virus replication, host immune infiltration, tumor vascularization and tumor growth were also evaluated. As expected, EPO-VACVs enhanced red blood cell (RBC) formation in xenograft model. The number of RBCs and hemoglobin (Hb) levels were significantly increased in EPO-VACVs-treated mice compared to GLV-1h68-treated or untreated control mice. However, the mean size of RBC or Hb content per RBC remained normal. Furthermore, over-expression of hEPO did not significantly affect numbers of lymphocytes, monocytes, leucocytes or platelets in the peripheral blood stream. The expression of hEPO in colonized tumors of mice treated with EPO-VACVs was demonstrated by immunohistological staining. Interestingly, there were 9 - 10 hEPO isoforms detected either in tumors, cells, or supernatant, while 3-4 basic isoforms were missing in blood serum, where only six hEPO isoforms were found. Tumor-bearing mice after treatment with EPO-VACVs showed enhanced tumor regression compared to GLV-1h68. The virus titers in tumors in EPO-VACVs-treated mice were 3-4 fold higher compared to GLV-1h68-treated mice. Nevertheless, no significant difference in virus titers among EPO-VACVs was found. The blood vessels in tumors were significantly enlarged while the blood vessel density remained unchanged compared to the GLV-1h68 treated mice, indicating that hEPO did not affect endothelial cell proliferation in this model. Meanwhile, rhEPO (Epoetin alfa) alone or in combination with GLV-1h68 did not show any signs of enhanced tumor growth when compared to untreated controls and GLV-1h68 groups, while doses used were clinical relevant (500 U/kg). These findings suggested that hEPO did not promote angiogenesis or tumor growth in the A549 tumor xenograft model. Human EPO has been reported to function as an immune modulator. In this study, however, we did not find any involvement of hEPO in immune cytokine and chemokine expression or innate immune cell infiltration (leucocytes, B cells, macrophages and dendritic cells) into infected tumors. The degree of immune infiltration and cytokine expression was directly correlated to the number of virus particles. Increased virus replication, led to more recruited immune cells and secreted cytokines/chemokines. It was proposed that tumor regression was at least partially mediated through activation of innate immune mechanisms. In conclusion, the novel EPO-VACVs were shown to significantly increase the number of RBCs, Hb levels, and virus replication in tumors as well as to enhance tumor regression in the A549 tumor xenograft model. Moreover, locally expressed hEPO did not promote tumor angiogenesis, tumor growth, and immune infiltration but was shown to causing enlarged tumoral microvessels which facilitated virus spreading. It is conceivable that in a possible clinical application, anemic cancer patients could benefit from the EPO-VACVs, where they could serve as "wellness pills" to decrease anemic symptoms, while simultaneously destroying tumors.},
  subject      = {Erythropoietin},
  language  = {en}
}
@phdthesis{PrietoGarcia2022,
  author    = {Prieto Garc{\´i}a, Cristian},
  title     = {USP28 regulates Squamous cell oncogenesis and DNA repair via ΔNp63 deubiquitination},
  doi       = {10.25972/OPUS-27033},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-270332},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {∆Np63 is a master regulator of squamous cell identity and regulates several signaling pathways that crucially contribute to the development of squamous cell carcinoma (SCC) tumors. Its contribution to coordinating the expression of genes involved in oncogenesis, epithelial identity, DNA repair, and genome stability has been extensively studied and characterized. For SCC, the expression of ∆Np63 is an essential requirement to maintain the malignant phenotype. Additionally, ∆Np63 functionally contributes to the development of cancer resistance toward therapies inducing DNA damage. SCC patients are currently treated with the same conventional Cisplatin therapy as they would have been treated 30 years ago. In contrast to patients with other tumor entities, the survival of SCC patients is limited, and the efficacy of the current therapies is rather low. Considering the rising incidences of these tumor entities, the development of novel SCC therapies is urgently required. Targeting ∆Np63, the transcription factor, is a potential alternative to improve the therapeutic response and clinical outcomes of SCC patients. However, ∆Np63 is considered "undruggable." As is commonly observed in transcription factors, ∆Np63 does not provide any suitable domains for the binding of small molecule inhibitors. ∆Np63 regulates a plethora of different pathways and cellular processes, making it difficult to counteract its function by targeting downstream effectors. As ∆Np63 is strongly regulated by the ubiquitin-proteasome system (UPS), the development of deubiquitinating enzyme inhibitors has emerged as a promising therapeutic strategy to target ∆Np63 in SCC treatment. This work involved identifying the first deubiquitinating enzyme that regulates ∆Np63 protein stability. Stateof-the-art SCC models were used to prove that USP28 deubiquitinates ∆Np63, regulates its protein stability, and affects squamous transcriptional profiles in vivo and ex vivo. Accordingly, SCC depends on USP28 to maintain essential levels of ∆Np63 protein abundance in tumor formation and maintenance. For the first time, ∆Np63, the transcription factor, was targeted in vivo using a small molecule inhibitor targeting the activity of USP28. The pharmacological inhibition of USP28 was sufficient to hinder the growth of SCC tumors in preclinical mouse models. Finally, this work demonstrated that the combination of Cisplatin with USP28 inhibitors as a novel therapeutic alternative could expand the limited available portfolio of SCC therapeutics. Collectively, the data presented within this dissertation demonstrates that the inhibition of USP28 in SCC decreases ∆Np63 protein abundance, thus downregulating the Fanconi anemia (FA) pathway and recombinational DNA repair. Accordingly, USP28 inhibition reduces the DNA damage response, thereby sensitizing SCC tumors to DNA damage therapies, such as Cisplatin.},
  language  = {en}
}
@phdthesis{Schleier2021,
  author    = {Schleier, Domenik},
  title     = {Using Photoionization to Investigate Reactive Boron Species and the Kinetics of Hydrocarbon Radicals},
  doi       = {10.25972/OPUS-24213},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-242137},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {This thesis highlights the importance of isomer-selective approaches for the complete analysis of chemical processes. The method of choice is photoelectron/photoion coincidence spectroscopy, which allows simultaneous detection of electrons and ions coming from a single ionization event. Ionization techniques are sensitive and can record multiple species simultaneously, rendering them ideal tools to probe molecular transformations. Coupling these setups to synchrotron radiation allows one to analyze complex mixtures with isomer selectivity, based on ionization energies and vibrational structure in the cation, without any prior separation steps. Only few setups exist that can be used to gather these data, although their impact and applicability is growing steadily in various fields. For closed-shell species an easier and more widely used method is gas-chromatography, but most open shell species would not survive the separation process. Due to the reactivity of radicals they have to be created by selectively converting stable precursor molecules. Depending on the radical generation method different properties can be investigated ranging from thermodynamic data, over concentrations in high temperature environments, to chemical kinetics. The first part of this thesis deals with the determination of bimolecular rate constants. Isomeric hydrocarbon radicals were generated by a high intense UV light pulses and their kinetics with oxygen was measured. The pressure dependence of different isomers in the falloff region was compared to theoretical models, and their reactivity could be explained. The second part deals with boron containing compounds in various electronic situations. The corresponding precursors were successfully synthesized or could be bought. They were subjected to fluorine atoms in chemical reactors or destroyed pyrolytically at high temperatures. Most investigated species exhibited vibronic effects that could be elucidated using high level computations.},
  subject      = {Biradikal},
  language  = {en}
}
@phdthesis{Beck2019,
  author    = {Beck, Sebastian},
  title     = {Using optogenetics to influence the circadian clock of \(Drosophila\) \(melanogaster\)},
  doi       = {10.25972/OPUS-18495},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-184952},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2019},
  abstract  = {Almost all life forms on earth have adapted to the most impactful and most predictable recurring change in environmental condition, the cycle of day and night, caused by the axial rotation of the planet. As a result many animals have evolved intricate endogenous clocks, which adapt and synchronize the organisms' physiology, metabolism and behaviour to the daily change in environmental conditions. The scientific field researching these endogenous clocks is called chronobiology and has steadily grown in size, scope and relevance since the works of the earliest pioneers in the 1960s. The number one model organism for the research of circadian clocks is the fruit fly, Drosophila melanogaster, whose clock serves as the entry point to understanding the basic inner workings of such an intricately constructed endogenous timekeeping system. In this thesis it was attempted to combine the research on the circadian clock with the techniques of optogenetics, a fairly new scientific field, launched by the discovery of Channelrhodopsin 2 just over 15 years ago. Channelrhodopsin 2 is a light-gated ion channel found in the green alga Chlamydomonas reinhardtii. In optogenetics, researches use these light-gated ion channels like Channelrhodopsin 2 by heterologously expressing them in cells and tissues of other organisms, which can then be stimulated by the application of light. This is most useful when studying neurons, as these channels provide an almost non-invasive tool to depolarize the neuronal plasma membranes at will. The goal of this thesis was to develop an optogenetic tool, which would be able to influence and phase shift the circadian clock of Drosophila melanogaster upon illumination. A phase shift is the adaptive response of the circadian clock to an outside stimulus that signals a change in the environmental light cycle. An optogenetic tool, able to influence and phase shift the circadian clock predictably and reliably, would open up many new ways and methods of researching the neuronal network of the clock and which neurons communicate to what extent, ultimately synchronizing the network. The first optogenetic tool to be tested in the circadian clock of Drosophila melanogaster was ChR2-XXL, a channelrhodopsin variant with dramatically increased expression levels and photocurrents combined with a prolonged open state. The specific expression of ChR2-XXL and of later constructs was facilitated by deploying the three different clock-specific GAL4-driver lines, clk856-gal4, pdf-gal4 and mai179-gal4. Although ChR2-XXL was shown to be highly effective at depolarizing neurons, these stimulations proved to be unable to significantly phase shift the circadian clock of Drosophila. The second series of experiments was conducted with the conceptually novel optogenetic tools Olf-bPAC and SthK-bPAC, which respectively combine a cyclic nucleotide-gated ion channel (Olf and SthK) with the light-activated adenylyl-cyclase bPAC. These tools proved to be quite useful when expressed in the motor neurons of instar-3 larvae of Drosophila, paralyzing the larvae upon illumination, as well as affecting body length. This way, these new tools could be precisely characterized, spawning a successfully published research paper, centered around their electrophysiological characterization and their applicability in model organisms like Drosophila. In the circadian clock however, these tools caused substantial damage, producing severe arrhythmicity and anomalies in neuronal development. Using a temperature-sensitive GAL80-line to delay the expression until after the flies had eclosed, yielded no positive results either. The last series of experiments saw the use of another new series of optogenetic tools, modelled after the Olf-bPAC, with bPAC swapped out for CyclOp, a membrane-bound guanylyl-cyclase, coupled with less potent versions of the Olf. This final attempt however also ended up being unsuccessful. While these tools could efficiently depolarize neuronal membranes upon illumination, they were ultimately unable to stimulate the circadian clock in way that would cause it to phase shift. Taken together, these mostly negative results indicate that an optogenetic manipulation of the circadian clock of Drosophila melanogaster is an extremely challenging subject. As light already constitutes the most impactful environmental factor on the circadian clock, the combination of chronobiology with optogenetics demands the parameters of the conducted experiments to be tuned with an extremely high degree of precision, if one hopes to receive positive results from these types of experiments at all.},
  subject      = {Chronobiologie},
  language  = {en}
}
@phdthesis{Gnamlin2015,
  author    = {Gnamlin, Prisca},
  title     = {Use of Tumor Vasculature for Successful Treatment of Carcinomas by Oncolytic Vaccinia Virus},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-119019},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {Tumor-induced angiogenesis is of major interest for oncology research. Vascular endothelial growth factor (VEGF) is the most potent angiogenic factor characterized so far. VEGF blockade was shown to be sufficient for angiogenesis inhibition and subsequent tumor regression in several preclinical tumor models. Bevacizumab was the first treatment targeting specifically tumor-induced angiogenesis through VEGF blockade to be approved by the Food and Drugs Administration (FDA) for cancer treatment. However, after very promising results in preclinical evaluations, VEGF blockade did not show the expected success in patients. Some tumors became resistant to VEGF blockade. Several factors have been accounted responsible, the over-expression of other angiogenic factors, the noxious influence of VEFG blockade on normal tissues, the selection of hypoxia resistant neoplastic cells, the recruitment of hematopoietic progenitor cells and finally the transient nature of angiogenesis inhibition by VEGF blockade. The development of blocking agents against other angiogenic factors like placental growth factor (PlGF) and Angiopoietin-2 (Ang-2) allows the development of an anti-angiogenesis strategy adapted to the profile of the tumor. Oncolytic virotherapy uses the natural propensity of viruses to colonize tumors to treat cancer. The recombinant vaccinia virus GLV-1h68 was shown to infect, colonize and lyse several tumor types. Its descendant GLV-1h108, expressing an anti-VEGF antibody, was proved in previous studies to inhibit efficiently tumor induced angiogenesis. Additional VACVs expressing single chain antibodies (scAb) antibodies against PlGF and Ang-2 alone or in combination with anti VEGF scAb were designed. In this study, VACV-mediated anti-angiogenesis treatments have been evaluated in several preclinical tumor models. The efficiency of PlGF blockade, alone or in combination with VEGF, mediated by VACV has been established and confirmed. PlGF inhibition alone or with VEGF reduced tumor burden 5- and 2-folds more efficiently than the control virus, respectively. Ang-2 blockade efficiency for cancer treatment gave controversial results when tested in different laboratories. Here we demonstrated that unlike VEGF, the success of Ang-2 blockade is not only correlated to the strength of the blockade. A particular balance between Ang-2, VEGF and Ang-1 needs to be induced by the treatment to see a regression of the tumor and an improved survival. We saw that Ang-2 inhibition delayed tumor growth up to 3-folds compared to the control virus. These same viruses induced statistically significant tumor growth delays. This study unveiled the need to establish an angiogenic profile of the tumor to be treated as well as the necessity to better understand the synergic effects of VEGF and Ang-2. In addition angiogenesis inhibition by VACV-mediated PlGF and Ang-2 blockade was able to reduce the number of metastases and migrating tumor cells (even more efficiently than VEGF blockade). VACV colonization of tumor cells, in vitro, was limited by VEGF, when the use of the anti-VEGF VACV GLV-1h108 drastically improved the colonization efficiency up to 2-fold, 72 hours post-infection. These in vitro data were confirmed by in vivo analysis of tumors. Fourteen days post-treatment, the anti-VEGF virus GLV-1h108 was colonizing 78.8\% of the tumors when GLV-1h68 colonization rate was 49.6\%. These data confirmed the synergistic effect of VEGF blockade and VACV replication for tumor regression. Three of the tumor cell lines used to assess VACV-mediated angiogenesis inhibition were found, in certain conditions, to mimic either endothelial cell or pericyte functions, and participate directly to the vascular structure. The expression by these tumor cells of e-selectin, p-selectin, ICAM-1 and VCAM-1, normally expressed on activated endothelial cells, corroborates our findings. These proteins play an important role in immune cell recruitment, and there amount vary in presence of VEGF, PlGF and Ang-2, confirming the involvement of angiogenic factors in the immuno-modulatory abilities of tumors. In this study VACV-mediated angiogenesis blockade proved its potential as a therapeutic agent able to treat different tumor types and prevent resistance observed during bevacizumab treatment by acting on different factors. First, the expression of several antibodies by VACV would prevent another angiogenic factor to take over VEGF and stimulate angiogenesis. Then, the ability of VACV to infect tumor cells would prevent them to form blood vessel-like structures to sustain tumor growth, and the localized delivery of the antibody would decrease the risk of adverse effects. Next, the blockade of angiogenic factors would improve VACV replication and decrease the immune-modulatory effect of tumors. Finally the fact that angiogenesis blockade lasts until total regression of the tumor would prevent the recovery of the tumor-associated vasculature and the relapse of patients.},
  subject      = {Vaccinia-Virus},
  language  = {en}
}
@phdthesis{FirdessaFite2015,
  author    = {Firdessa Fite, Rebuma},
  title     = {Use of polyhexanide and nanomedicine approach for effective treatments of cutaneous leishmaniasis},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-115072},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {Despite huge suffering caused by cutaneous leishmaniasis (CL), there is no effective and affordable treatment strategy against CL and no licensed vaccines. The current treatments show limited efficacy and high toxicity. Improved therapies through discovery of novel drugs and/or an alternative treatment approaches are/is urgently needed. We aimed at identifying a novel antileishmanial agent and developing an innovative nanoparticle (NP) based platform for safe and effective treatments against CL. We discovered that polyhexanide (PHMB), a widely used antimicrobial polymer and wound antisepsis, shows an inherent antileishmanial activity at submicromolar concentrations. PHMB appears to kill L. major parasites via a dual mechanism involving disruption of membrane integrity and selective chromosome condensation. However, host chromosomes binding appear to be limited by exclusion from mammalian cell nuclei. Moreover, we attempted to establish effective drug delivery systems that overcome the various shortcomings in the present treatment of CL. In this scenario, we initially studied the cellular interactions of NPs and their uptake mechanisms into mammalian cells before applying them in drug delivery system. We obtained clear evidence for the involvement of multiple endocytic routes to internalize NPs. Physicochemical properties of NPs, cell type, temperature and pathogenesis of the target diseases were shown to be determinant factors. Thereafter, a mechanism based host- and pathogen-directed combination therapy comprising PHMB and CpG ODN immunomodulator was established for overall synergistic effect against CL. It simultaneously targets the pathogen and the host immunity with effective delivery system. The results show that PHMB binds to CpG ODN and form stable nanopolyplexes for efficient cell entry and therapy. The nanopolyplexes displayed enhanced cellular uptake and antileishmanial potency while drastically reducing the toxicity against mammalian cells. In conclusion, our findings clearly indicate that PHMB can be used as effective candidate drug against CL and as non-viral delivery of immunomodulatorynucleic acids. Moreover, our proof-of concept study showed nanomedicine approaches are effective strategy to challenge CL and other human diseases.},
  subject      = {Leishmaniose},
  language  = {en}
}
@phdthesis{Heldens2010,
  author    = {Heldens, Wieke},
  title     = {Use of airborne hyperspectral data and height information to support urban micro climate characterisation},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-48935},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {The urban micro climate has been increasingly recognised as an important aspect for urban planning. Therefore, urban planners need reliable information on the micro climatic characteristics of the urban environment. A suitable spatial scale and large spatial coverage are important requirements for such information. This thesis presents a conceptual framework for the use of airborne hyperspectral data to support urban micro climate characterisation, taking into account the information needs of urban planning. The potential of hyperspectral remote sensing in characterising the micro climate is demonstrated and evaluated by applying HyMap airborne hyperspectral and height data to a case study of the German city of Munich. The developed conceptual framework consists of three parts. The first is concerned with the capabilities of airborne hyperspectral remote sensing to map physical urban characteristics. The high spatial resolution of the sensor allows to separate the relatively small urban objects. The high spectral resolution enables the identification of the large range of surface materials that are used in an urban area at up to sub-pixel level. The surface materials are representative for the urban objects of which the urban landscape is composed. These spatial urban characteristics strongly influence the urban micro climate. The second part of the conceptual framework provides an approach to use the hyperspectral surface information for the characterisation of the urban micro climate. This can be achieved by integrating the remote sensing material map into a micro climate model. Also spatial indicators were found to provide useful information on the micro climate for urban planners. They are commonly used in urban planning to describe building blocks and are related to several micro climatic parameters such as temperature and humidity. The third part of the conceptual framework addresses the combination and presentation of the derived indicators and simulation results under consideration of the planning requirements. Building blocks and urban structural types were found to be an adequate means to group and present the derived information for micro climate related questions to urban planners. The conceptual framework was successfully applied to a case study in Munich. Airborne hyperspectral HyMap data has been used to derive a material map at sub-pixel level by multiple endmember linear spectral unmixing. This technique was developed by the German Research Centre for Geosciences (GFZ) for applications in Dresden and Potsdam. A priori information on building locations was used to support the separation between spectrally similar materials used both on building roofs and non-built surfaces. In addition, surface albedo and leaf area index are derived from the HyMap data. The sub-pixel material map supported by object height data is then used to derive spatial indicators, such as imperviousness or building density. To provide a more detailed micro climate characterisation at building block level, the surface materials, albedo, leaf area index (LAI) and object height are used as input for simulations with the micro climate model ENVI-met. Concluding, this thesis demonstrated the potential of hyperspectral remote sensing to support urban micro climate characterisation. A detailed mapping of surface materials at sub-pixel level could be performed. This provides valuable, detailed information on a large range of spatial characteristics relevant to the assessment of the urban micro climate. The developed conceptual framework has been proven to be applicable to the case study, providing a means to characterise the urban micro climate. The remote sensing products and subsequent micro climatic information are presented at a suitable spatial scale and in understandable maps and graphics. The use of well-known spatial indicators and the framework of urban structural types can simplify the communication with urban planners on the findings on the micro climate. Further research is needed primarily on the sensitivity of the micro climate model towards the remote sensing based input parameters and on the general relation between climate parameters and spatial indicators by comparison with other cities.},
  subject      = {Mikroklima},
  language  = {en}
}
@phdthesis{Ibrahim2024,
  author    = {Ibrahim, Eslam Samir Ragab},
  title     = {Unraveling the function of the old yellow enzyme OfrA in \(Staphylococcus\) \(aureus\) stress response},
  doi       = {10.25972/OPUS-28960},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-289600},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {Biological systems are in dynamic interaction. Many responses reside in the core concepts of biological systems interplay (competition and cooperation). In infection situation, the competition between a bacterial system and a host is shaped by many stressors at spatial and temporal determinants. Reactive chemical species are universal stressors against all biological systems since they potentially damage the basic requirements of these systems (nucleic acids, proteins, carbohydrates, and lipids). Either produced endogenously or exogenously, reactive chemical species affect the survival of pathogens including the gram-positive Staphylococcus aureus (S. aureus). Therefore, bacteria developed strategies to overcome the toxicity of reactive species. S. aureus is a widely found opportunistic pathogen. In its niche, S. aureus is in permanent contact with surrounding microbes and host factors. Deciphering the deterministic factors in these interactions could facilitate pinpointing novel bacterial targets. Identifying the aforementioned targets is crucial to develop new strategies not only to kill the pathogenic organisms but also to enhance the normal flora to minimize the pathogenicity and virulence of potential pathogens. Moreover, targeting S. aureus stress response can be used to overcome bacterial resistance against host-derived factors. In this study, I identify a novel S. aureus stress response factor against reactive electrophilic, oxygen, and hypochlorite species to better understand its resilience as a pathogen. Although bacterial stress response is an active research field, gene function is a current bottleneck in characterizing the understudied bacterial strategies to mediate stress conditions. I aimed at understanding the function of a novel protein family integrated in many defense systems of several biological systems. In bacteria, fungi, and plants, old yellow enzymes (OYEs) are widely found. Since the first isolation of the yellow flavoprotein, OYEs are used as biocatalysts for decades to reduce activated C=C bonds in α,β-unsaturated carbonyl compounds. The promiscuity of the enzymatic catalysis is advantageous for industrial applications. However, the physiological function of OYEs, especially in bacteria, is still puzzling. Moreover, the relevance of the OYEs in infection conditions remained enigmatic.   Here, I show that there are two groups of OYEs (OYE flavin oxidoreductase, OfrA and OfrB) that are encoded in staphylococci and some firmicutes. OfrA (SAUSA300_0859) is more conserved than OfrB (SAUSA300_0322) in staphylococci and is a part of the staphylococcal core genome. A reporter system was established to report for ofrA in S. aureus background. The results showed that ofrA is induced under electrophilic, oxidative, and hypochlorite stress. OfrA protects S. aureus against quinone, methylglyoxal, hydrogen peroxide, and hypochlorite stress. Additionally, the results provide evidence that OfrA supports thiol-dependent redox homeostasis. At the host-pathogen interface, OfrA promotes S. aureus fitness in murine macrophage cell line. In whole human blood, OfrA is involved in S. aureus survival indicating a potential clinical relevance to bacteraemia. In addition, ofrA mutation affects the production of the virulence factor staphyloxanthin via the upper mevalonate pathway. In summary, decoding OfrA function and its proposed mechanism of action in S. aureus shed the light on a conserved stress response within multiple organisms.},
  subject      = {Staphylococcus aureus},
  language  = {en}
}
@phdthesis{Kass2019,
  author    = {Kaß, Christina},
  title     = {Unnecessary Alarms in Driving: The Impact of Discrepancies between Human and Machine Situation Awareness on Drivers' Perception and Behaviour},
  doi       = {10.25972/OPUS-19252},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-192520},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2019},
  abstract  = {Forward Collision Alarms (FCA) intend to signal hazardous traffic situations and the need for an immediate corrective driver response. However, data of naturalistic driving studies revealed that approximately the half of all alarms activated by conventional FCA systems represented unnecessary alarms. In these situations, the alarm activation was correct according to the implemented algorithm, whereas the alarms led to no or only minimal driver responses. Psychological research can make an important contribution to understand drivers' needs when interacting with driver assistance systems. The overarching objective of this thesis was to gain a systematic understanding of psychological factors and processes that influence drivers' perceived need for assistance in potential collision situations. To elucidate under which conditions drivers perceive alarms as unnecessary, a theoretical framework of drivers' subjective alarm evaluation was developed. A further goal was to investigate the impact of unnecessary alarms on drivers' responses and acceptance. Four driving simulator studies were carried out to examine the outlined research questions. In line with the hypotheses derived from the theoretical framework, the results suggest that drivers' perceived need for assistance is determined by their retrospective subjective hazard perception. While predictions of conventional FCA systems are exclusively based on physical measurements resulting in a time to collision, human drivers additionally consider their own manoeuvre intentions and those attributed to other road users to anticipate the further course of a potentially critical situation. When drivers anticipate a dissolving outcome of a potential conflict, they perceive the situation as less hazardous than the system. Based on this discrepancy, the system would activate an alarm, while drivers' perceived need for assistance is low. To sum up, the described factors and processes cause drivers to perceive certain alarms as unnecessary. Although drivers accept unnecessary alarms less than useful alarms, unnecessary alarms do not reduce their overall system acceptance. While unnecessary alarms cause moderate driver responses in the short term, the intensity of responses decrease with multiple exposures to unnecessary alarms. However, overall, effects of unnecessary alarms on drivers' alarm responses and acceptance seem to be rather uncritical. This thesis provides insights into human factors that explain when FCAs are perceived as unnecessary. These factors might contribute to design FCA systems tailored to drivers' needs.},
  subject      = {Fahrerassistenzsystem},
  language  = {en}
}
@phdthesis{Sourmelidis2020,
  author    = {Sourmelidis, Athanasios},
  title     = {Universality and Hypertranscendence of Zeta-Functions},
  doi       = {10.25972/OPUS-19369},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-193699},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2020},
  abstract  = {The starting point of the thesis is the {\it universality} property of the Riemann Zeta-function \$\zeta(s)\$ which was proved by Voronin in 1975: {\it Given a positive number \$\varepsilon>0\$ and an analytic non-vanishing function \$f\$ defined on a compact subset \$\mathcal{K}\$ of the strip \$\left\{s\in\mathbb{C}:1/2 < \Re s< 1\right\}\$ with connected complement, there exists a real number \$\tau\$ such that \begin{align}\label{continuous} \max\limits_{s\in \mathcal{K}}|\zeta(s+i\tau)-f(s)|<\varepsilon. \end{align} } In 1980, Reich proved a discrete analogue of Voronin's theorem, also known as {\it discrete universality theorem} for \$\zeta(s)\$: {\it If \$\mathcal{K}\$, \$f\$ and \$\varepsilon\$ are as before, then \begin{align}\label{discretee} \liminf\limits_{N\to\infty}\dfrac{1}{N}\sharp\left\{1\leq n\leq N:\max\limits_{s\in \mathcal{K}}|\zeta(s+i\Delta n)-f(s)|<\varepsilon\right\}>0, \end{align} where \$\Delta\$ is an arbitrary but fixed positive number. } We aim at developing a theory which can be applied to prove the majority of all so far existing discrete universality theorems in the case of Dirichlet \$L\$-functions \$L(s,\chi)\$ and Hurwitz zeta-functions \$\zeta(s;\alpha)\$, where \$\chi\$ is a Dirichlet character and \$\alpha\in(0,1]\$, respectively. Both of the aforementioned classes of functions are generalizations of \$\zeta(s)\$, since \$\zeta(s)=L(s,\chi_0)=\zeta(s;1)\$, where \$\chi_0\$ is the principal Dirichlet character mod 1. Amongst others, we prove statement (2) where instead of \$\zeta(s)\$ we have \$L(s,\chi)\$ for some Dirichlet character \$\chi\$ or \$\zeta(s;\alpha)\$ for some transcendental or rational number \$\alpha\in(0,1]\$, and instead of \$(\Delta n)_{n\in\mathbb{N}}\$ we can have: \begin{enumerate} \item \textit{Beatty sequences,} \item \textit{sequences of ordinates of \$c\$-points of zeta-functions from the Selberg class,} \item \textit{sequences which are generated by polynomials.} \end{enumerate} In all the preceding cases, the notion of {\it uniformly distributed sequences} plays an important role and we draw attention to it wherever we can. Moreover, for the case of polynomials, we employ more advanced techniques from Analytic Number Theory such as bounds of exponential sums and zero-density estimates for Dirichlet \$L\$-functions. This will allow us to prove the existence of discrete second moments of \$L(s,\chi)\$ and \$\zeta(s;\alpha)\$ on the left of the vertical line \$1+i\mathbb{R}\$, with respect to polynomials. In the case of the Hurwitz Zeta-function \$\zeta(s;\alpha)\$, where \$\alpha\$ is transcendental or rational but not equal to \$1/2\$ or 1, the target function \$f\$ in (1) or (2), where \$\zeta(\cdot)\$ is replaced by \$\zeta(\cdot;\alpha)\$, is also allowed to have zeros. Until recently there was no result regarding the universality of \$\zeta(s;\alpha)\$ in the literature whenever \$\alpha\$ is an algebraic irrational. In the second half of the thesis, we prove that a weak version of statement \eqref{continuous} for \$\zeta(s;\alpha)\$ holds for all but finitely many algebraic irrational \$\alpha\$ in \$[A,1]\$, where \$A\in(0,1]\$ is an arbitrary but fixed real number. Lastly, we prove that the ordinary Dirichlet series \$\zeta(s;f)=\sum_{n\geq1}f(n)n^{-s}\$ and \$\zeta_\alpha(s)=\sum_{n\geq1}\lfloor P(\alpha n+\beta)\rfloor^{-s}\$ are hypertranscendental, where \$f:\mathbb{N}\to\mathbb{C}\$ is a {\it Besicovitch almost periodic arithmetical function}, \$\alpha,\beta>0\$ are such that \$\lfloor\alpha+\beta\rfloor>1\$ and \$P\in\mathbb{Z}[X]\$ is such that \$P(\mathbb{N})\subseteq\mathbb{N}\$.},
  subject      = {Analytische Zahlentheorie},
  language  = {en}
}
@phdthesis{vonSchoenfeld2022,
  author    = {von Sch{\"o}nfeld, Cornelia},
  title     = {Universal prevention of nonsuicidal self-injury for children and adolescents - A systematic review -},
  doi       = {10.25972/OPUS-28702},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-287020},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {In a synopsis of the current state of research regarding NSSI, there are two key findings of this thesis: Firstly, there is a severe scarcity of studies and currently no evidence base for effective universal prevention of NSSI in youth. Secondly, not only the number but also quality of those few studies found was considered too low to draw wide-ranging conclusions and no meta-analysis could be conducted. This conclusion based - among other factors listed in chapter six - on the application of the EPHPP quality assessment tool (Evans, Lasen et al. 2015), which revealed distinct deficiencies and a weak overall study quality for all seven studies. Even if the high prevalence of NSSI among adolescents and the importance of this field of research is increasingly emphasized in contemporary literature (Muehlenkamp, Walsh et al. 2010, Wasserman, Carli et al. 2010, Brunner, Kaess et al. 2014, Plener, Schumacher et al. 2015), the shortage of concrete programs addressing the issue is manifest. The potential to tackle NSSI via prevention is underlined in view of the fact that many recent studies prove the high potential of primary prevention regarding NSSI incidences (Evans, Hawton et al. 2005, Fortune, Sinclair et al. 2008). From the studies included for this review, it can be concluded that most interventions show positive effects in raising awareness, knowledge, understanding of risk factors and help-seeking attitudes among school staff or students, particularly when starting with low knowledge at baseline (Robinson, Gook et al. 2008). Yet, most studies focus on training of gatekeepers and only two programmes address students directly and primarily measure actual NSSI behaviour. This finding highlights the importance of more investigation into concrete NSSI measurement targeting mainly the group of youth. There is a severe lack of literature on primary prevention with suitable contexts and target groups, while reviews on secondary targeted prevention deliver much more potential in the quantity of research (Kothgassner, Robinson et al. 2020, Kothgassner, Goreis et al. 2021). Until that changes, secondary prevention approaches of NSSI should be relied upon first. Looking into the future, several considerations may help advance universal approaches to NSSI. Regarding study planning, it is crucial for future research to pursue a thorough background research, examine the feasibility of interventions, and evaluate the appropriateness of study samples chosen. Moreover, research groups are expected to ensure a close observation of participants in cases of adverse events, in order to offer support, but also detect potential deficiencies in the study organisation. Additionally - in accordance with other research in this field (Plener, Brunner et al. 2010) - findings of this review highlight the necessity to expand fundamental research on functions of NSSI and its (neurobiological) mechanism of formation in order to enhance the knowledge of correlations and improve effective preventive approaches. As psychoeducational methods have shown risks of iatrogenic effects (e.g. in patients with eating disorders) (Stice, 2007 \#10063), it might be worthwhile to focus on improving emotion regulation in order to strengthen protective factors and improve adolescents' management of their everyday lives rather than on merely mitigating possible risk factors. Regarding intervention costs, it appears indispensable to include more cost calculations in the study planning of future research. In contrast to therapeutic interventions of NSSI, which are usually conducted in an in-patient setting and entail high measurable expenses as compared to preventive interventions, preventive approaches may in case of success result in a reduction of clinical presentation (O'Connell, Boat et al. 2009). A promising outlook is entailed by study protocol presenting a skills-based universal prevention program of NSSI "DUDE", a cluster randomized controlled trial scheduled for 16 German schools with a total of 3.200 adolescents (Buerger, Emser et al. 2022). The program is tailored to decrease the incidence of NSSI and avert potential and associated long-term consequences like suicidality among adolescents. It is aimed to provide easy access for adolescents due to its implementation during lesson time at school and is declared cost-effective. Furthermore, DUDE is a promising approach to effective NSSI prevention, as it is intended to improve mental health through the pathway of emotion regulation. It remains to await the implementation of the protocol, which is currently delayed due to the SARS-CoV-19 pandemic. In sum, initial research is promising and suggests that the approach to tackle NSSI via prevention is meaningful. Yet, high-quality studies on the development and evaluation of universal NSSI prevention in adolescents are urgently needed.},
  language  = {en}
}
@phdthesis{Pohl2019,
  author    = {Pohl, Daniel},
  title     = {Universal Locally Univalent Functions and Universal Conformal Metrics},
  doi       = {10.25972/OPUS-17717},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-177174},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2019},
  abstract  = {The work at hand discusses various universality results for locally univalent and conformal metrics. In Chapter 2 several interesting approximation results are discussed. Runge-type Theorems for holomorphic and meromorphic locally univalent functions are shown. A well-known local approximation theorem for harmonic functions due to Keldysh is generalized to solutions of the curvature equation. In Chapter 3 and 4 these approximation theorems are used to establish universality results for locally univalent functions and conformal metrics. In particular locally univalent analogues for well-known universality results due Birkhoff, Seidel \& Walsh and Heins are shown.},
  subject      = {Schlichte Funktion},
  language  = {en}
}
@phdthesis{Schmeller2022,
  author    = {Schmeller, Christof},
  title     = {Uniform distribution of zero ordinates of Epstein zeta-functions},
  doi       = {10.25972/OPUS-25199},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-251999},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {The dissertation investigates the wide class of Epstein zeta-functions in terms of uniform distribution modulo one of the ordinates of their nontrivial zeros. Main results are a proof of a Landau type theorem for all Epstein zeta-functions as well as uniform distribution modulo one for the zero ordinates of all Epstein zeta-functions asscoiated with binary quadratic forms.},
  subject      = {Zetafunktion},
  language  = {en}
}
@phdthesis{Dannemann2015,
  author    = {Dannemann, Frank},
  title     = {Unified Monitoring of Spacecrafts},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-115934},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {Within this thesis a new philosophy in monitoring spacecrafts is presented: the unification of the various kinds of monitoring techniques used during the different lifecylce phases of a spacecraft. The challenging requirements being set for this monitoring framework are: - "separation of concerns" as a design principle (dividing the steps of logging from registered sources, sending to connected sinks and displaying of information), - usage during all mission phases, - usage by all actors (EGSE engineers, groundstation operators, etc.), - configurable at runtime, especially regarding the level of detail of logging information, and - very low resource consumption. First a prototype of the monitoring framework was developed as a support library for the real-time operating system RODOS. This prototype was tested on dedicated hardware platforms relevant for space, and also on a satellite demonstrator used for educational purposes. As a second step, the results and lessons learned from the development and usage of this prototype were transfered to a real space mission: the first satellite of the DLR compact satellite series - a space based platform for DLR's own research activities. Within this project, the software of the avionic subsystem was supplemented by a powerful logging component, which enhances the traditional housekeeping capabilities and offers extensive filtering and debugging techniques for monitoring and FDIR needs. This logging component is the major part of the flight version of the monitoring framework. It is completed by counterparts running on the development computers and as well as the EGSE hardware in the integration room, making it most valuable already in the earliest stages of traditional spacecraft development. Future plans in terms of adding support from the groundstation as well will lead to a seamless integration of the monitoring framework not only into to the spacecraft itself, but into the whole space system.},
  subject      = {Raumfahrzeug},
  language  = {en}
}
@phdthesis{Seifert2022,
  author    = {Seifert, Annika Kristina},
  title     = {Unidirectional freezing of soft and hard matter for biomedical applications},
  doi       = {10.25972/OPUS-27728},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-277281},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {A multitude of human tissues, such as bones, tendons, or muscles, are characterized by a hierarchical and highly ordered structure. In many cases, the loss of these tissues requires reconstruction using biocompatible replacement materials. In the field of bone replacement, the pore structure of the material has a crucial influence. Anisotropic porosity would have the advantage of facilitating the ingrowth of cells and newly formed blood vessels as well as the transport of nutrients. In this thesis, scaffolds with a highly ordered and anisotropic pore structure were fabricated using unidirectional freezing. Systematic investigations were carried out on biopolymer solutions (alginate and chitosan) to gain a deeper understanding of the freeze-structuring process. The knowledge gained was then applied to the development of anisotropically structured bone substitute materials. Here, the previously existing material platform for anisotropically structured calcium phosphates was extended to low-temperature phases such as calcium deficient hydroxyapatite (CDHA) or the secondary phosphates monetite and brushite. After the implantation of a biomaterial, the inevitably triggered initial immune response plays a key role in the success of a graft, with immune cells such as neutrophils or macrophages being of particular importance. In this thesis, the influence of anisotropically structured alpha-TCP and CDHA scaffolds as well as their unstructured references on human monocytes/macrophages was investigated. Macrophages produced extracellular traps (ETs) due to mineral nanoparticles formed by the binding of phosphate and calcium ions to human platelet lysate. In particular, incubation of alpha-TCP samples in lysate containing cell culture medium resulted in pronounced particle formation and enhanced release of ETs.},
  subject      = {Freezing},
  language  = {en}
}
@phdthesis{Bleier2023,
  author    = {Bleier, Michael},
  title     = {Underwater Laser Scanning - Refractive Calibration, Self-calibration and Mapping for 3D Reconstruction},
  isbn      = {978-3-945459-45-4},
  doi       = {10.25972/OPUS-32269},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-322693},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {There is great interest in affordable, precise and reliable metrology underwater: Archaeologists want to document artifacts in situ with high detail. In marine research, biologists require the tools to monitor coral growth and geologists need recordings to model sediment transport. Furthermore, for offshore construction projects, maintenance and inspection millimeter-accurate measurements of defects and offshore structures are essential. While the process of digitizing individual objects and complete sites on land is well understood and standard methods, such as Structure from Motion or terrestrial laser scanning, are regularly applied, precise underwater surveying with high resolution is still a complex and difficult task. Applying optical scanning techniques in water is challenging due to reduced visibility caused by turbidity and light absorption. However, optical underwater scanners provide significant advantages in terms of achievable resolution and accuracy compared to acoustic systems. This thesis proposes an underwater laser scanning system and the algorithms for creating dense and accurate 3D scans in water. It is based on laser triangulation and the main optical components are an underwater camera and a cross-line laser projector. The prototype is configured with a motorized yaw axis for capturing scans from a tripod. Alternatively, it is mounted to a moving platform for mobile mapping. The main focus lies on the refractive calibration of the underwater camera and laser projector, the image processing and 3D reconstruction. For highest accuracy, the refraction at the individual media interfaces must be taken into account. This is addressed by an optimization-based calibration framework using a physical-geometric camera model derived from an analytical formulation of a ray-tracing projection model. In addition to scanning underwater structures, this work presents the 3D acquisition of semi-submerged structures and the correction of refraction effects. As in-situ calibration in water is complex and time-consuming, the challenge of transferring an in-air scanner calibration to water without re-calibration is investigated, as well as self-calibration techniques for structured light. The system was successfully deployed in various configurations for both static scanning and mobile mapping. An evaluation of the calibration and 3D reconstruction using reference objects and a comparison of free-form surfaces in clear water demonstrate the high accuracy potential in the range of one millimeter to less than one centimeter, depending on the measurement distance. Mobile underwater mapping and motion compensation based on visual-inertial odometry is demonstrated using a new optical underwater scanner based on fringe projection. Continuous registration of individual scans allows the acquisition of 3D models from an underwater vehicle. RGB images captured in parallel are used to create 3D point clouds of underwater scenes in full color. 3D maps are useful to the operator during the remote control of underwater vehicles and provide the building blocks to enable offshore inspection and surveying tasks. The advancing automation of the measurement technology will allow non-experts to use it, significantly reduce acquisition time and increase accuracy, making underwater metrology more cost-effective.},
  subject      = {Selbstkalibrierung},
  language  = {en}
}
@phdthesis{LiessneeEller2021,
  author    = {Liess [n{\´e}e Eller], Anna Katharina Luise},
  title     = {Understanding the regulation of the ubiquitin-conjugating enzyme UBE2S},
  doi       = {10.25972/OPUS-20419},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-204190},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {The ubiquitination of proteins serves as molecular signal to control an enormous number of physiological processes and its dysregulation is connected to human diseases like cancer. The versatility of this signal stems from the diverse ways by which ubiquitin can be attached to its targets. Thus, specificity and tight regulation of the ubiquitination are pivotal requirements of ubiquitin signaling. Ubiquitin-conjugating enzymes (E2s) act at the heart of the ubiquitination cascade, transferring ubiquitin from a ubiquitin-activating enzyme (E1) to a ubiquitin ligase (E3) or substrate. When cooperating with a RING-type E3, ubiquitin-conjugating enzymes can determine linkage specificity in ubiquitin chain formation. Our understanding of the regulation of E2 activities is still limited at a structural level. The work described here identifies two regulation mechanisms in UBE2S, a cognate E2 of the human RING-type E3 anaphase-promoting complex/cyclosome (APC/C). UBE2S elongates ubiquitin chains on APC/C substrates in a Lys11 linkage-specific manner, thereby targeting these substrates for degradation and driving mitotic progression. In addition, UBE2S was found to have a role in DNA repair by enhancing non-homologous end-joining (NHEJ) and causing transcriptional arrest at DNA damage sites in homologous recombination (HR). Furthermore, UBE2S overexpression is a characteristic feature of many cancer types and is connected to poor prognosis and diminished response to therapy. The first regulatory mechanism uncovered in this thesis involves the intramolecular auto-ubiquitination of a particular lysine residue (Lys+5) close to the active site cysteine, presumably through conformational flexibility of the active site region. The Lys+5-linked ubiquitin molecule adopts a donor-like, 'closed' orientation towards UBE2S, thereby conferring auto-inhibition. Notably, Lys+5 is a major physiological ubiquitination site in ~25\% of the human E2 enzymes, thus providing regulatory opportunities beyond UBE2S. Besides the active, monomeric state and the auto-inhibited state caused by auto-ubiquitination, I discovered that UBE2S can adopt a dimeric state. The latter also provides an auto-inhibited state, in which ubiquitin transfer is blocked via the obstruction of donor binding. UBE2S dimerization is promoted by its unique C-terminal extension, suppresses auto-ubiquitination and thereby the proteasomal degradation of UBE2S. Taken together, the data provided in this thesis illustrate the intricate ways by which UBE2S activity is fine-tuned and the notion that structurally diverse mechanisms have evolved to restrict the first step in the catalytic cycle of E2 enzymes.},
  subject      = {E2},
  language  = {en}
}
@phdthesis{Murali2023,
  author    = {Murali, Supriya},
  title     = {Understanding the function of spontaneous blinks by investigating internally and externally directed processes},
  doi       = {10.25972/OPUS-28747},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-287473},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {Humans spontaneously blink several times a minute. These blinks are strongly modulated during various cognitive task. However, the precise function of blinking and the reason for their modulation has not been fully understood. In the present work, I investigated the function of spontaneous blinks through various perceptual and cognitive tasks. Previous research has revealed that blinks rates decrease during some tasks but increase during others. When trying to understand these seemingly contradictory results, I observed that blink reduction occurs when one engages with an external input. For instance, a decrease has been observed due to the onset of a stimulus, sensory input processing and attention towards sensory input. However, for activities that do not involve such an engagement, e.g. imagination, daydreaming or creativity, the blink rate has been shown to increase. To follow up on the proposed hypothesis, I distinguished tasks that involve the processing of an external stimulus and tasks that involve disengagement. In the first part of the project, I explored blinking during stimulus engagement. If the probability of blinking is low when engaging with the stimulus, then one should find a reduction in blinks specifically during the time period of processing but not during sensory input per se. To this end, in study 1, I tested the influence of task-relevant information duration on blink timing and additionally manipulated the overall sensory input using a visual and an auditory temporal simultaneity judgement task. The results showed that blinks were suppressed longer for longer periods of relevant information or in other words, blinks occurred at the end of relevant information processing for both the visual and the auditory modality. Since relevance is mediated through top-down processes, I argue that the reduction in blinks is a top-down driven suppression. In studies 2 and 3, I again investigated stimulus processing, but in this case, processing was triggered internally and not based on specific changes in the external input. To this end, I used bistable stimuli, in which the actual physical stimulus remains constant but their perception switches between different interpretations. Studies on the involvement of attention in such bistable perceptual changes indicate that the sensory input is reprocessed before the perceptual switch. The results revealed a reduction in eye blink rates before the report of perceptual switches. Importantly, I was able to decipher that the decrease was not caused by the perceptual switch or the behavioral response but likely started before the internal switch. Additionally, periods between a blink and a switch were longer than interblink intervals, indicating that blinks were followed by a period of stable percept. To conclude, the first part of the project revealed that there is a top-down driven blink suppression during the processing of an external stimulus. In the second part of the project, I extended the idea of blinks marking the disengagement from external processing and tested if blinking is associated with better performance during internally directed processes. Specifically, I investigated divergent thinking, an aspect of creativity, and the link between performance and blink rates as well as the effect of motor restriction. While I could show that motor restriction was the main factor influencing divergent thinking, the relationship between eye blink rates and creative output also depended on restriction. Results showed that higher blink rates were associated with better performance during free movement, but only between subjects. In other words, subjects who had overall higher blink rates scored better in the task, but when they were allowed to sit or walk freely. Within a single subject, trial with higher blink rates were not associated with better performance. Therefore, possibly, people who are able to disengage easily, as indicated by an overall high blink rate, perform better in divergent thinking tasks. However, the link between blink rate and internal tasks is not clear at this point. Indeed, a more complex measurement of blink behavior might be necessary to understand the relationship. In the final part of the project, I aimed to further understand the function of blinks through their neural correlates. I extracted the blink-related neural activity in the primary visual cortex (V1) of existing recordings of three rhesus monkeys during different sensory processing states. I analyzed spike related multi-unit responses, frequency dependent power changes, local field potentials and laminar distribution of activity while the animal watched a movie compared to when it was shown a blank screen. The results showed a difference in blink-related neural activity dependent on the processing state. This difference suggests a state dependent function of blinks. Taken altogether, the work presented in this thesis suggests that eye blinks have an important function during cognitive and perceptual processes. Blinks seem to facilitate a disengagement from the external world and are therefore suppressed during intended processing of external stimuli.},
  subject      = {Lidschlag},
  language  = {en}
}
@phdthesis{Truongvan2023,
  author    = {Truongvan, Ngoc},
  title     = {Understanding the dual specificity of UBA6},
  doi       = {10.25972/OPUS-24457},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-244579},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {Ubiquitylation is a protein post translational modification, in which ubiquitin is covalently attached to target protein substrates resulting in diverse cellular outcomes. Besides ubiquitin, various ubiquitin-like proteins including FAT10 exist, which are also conjugated to target proteins. The underlying modification mechanisms are conserved. In the initial step, ubiquitin or a ubiquitin-like protein is thioester-linked to a catalytic cysteine in the E1activating enzyme in an ATP-dependent manner. The respective protein modifier is then transferred to an E2 conjugating enzyme in a transthioesterification reaction. Finally, an E3 ubiquitin ligase E3 catalyzes the covalent attachment of the protein modifier to a substrate. In the case of ubiquitin, multiple ubiquitin molecules can be attached to a substrate in the form of either linear or branched polyubiquitin chains but also as single ubiquitin modifications. Depending on the nature of the ubiquitin chain, the substrates are destined to various cellular processes such as their targeted destruction by the proteasome but also non-degradative outcomes may occur. As stated above FAT10 is a ubiquitin-like protein modifier which typically targets proteins for proteasomal degradation. It consists of two ubiquitin-like domains and is mainly expressed in cells of the human immune system. The reported involvement of FAT10 modifications in cancers and other diseases has caught the attention of the scientific community as an inhibition of the FAT10ylation process may provide avenues for novel therapeutic approaches. UBA6 is the E1 activating enzyme that resides at the apex of the FAT10 proteasomal degradation pathway. UBA6 not only recognizes FAT10 but can also activate ubiquitin as efficiently as the ubiquitin specific E1 UBA1. The dual specificity of UBA6 may complicate the inhibition FAT10ylation since targeting the active site of UBA6 will also inhibit the UBA6-catalyzed ubiquitin activation. Therefore, it is important to understand the underlying principles for the dual specificity of UBA6 prior to the development of compounds interfering with FAT10ylation. In this thesis important novel insights into the structure and function of UBA6 were derived by X-ray crystallography and biochemical methods. The first crystal structure of UBA6 reveals the multidomain architecture of this enzyme in atomic detail. The enzyme is composed of a rigid core including its active and inactive adenylation domains as well as a 4 helix bundle. Overall, the molecule adopts a "Y" shape architecture with the core at the base and the first and second catalytic half domains forming one arm of the "Y" and the ubiquitin fold domain constituting the other arm. While UBA6 shares the same domain architecture as UBA1, substantial differences were revealed by the crystal structure. In particular, the first catalytic half domain undergoes a significant shift to a position more distal from the core. This rigid body movement is assumed to generate room to accommodate the second ubiquitin-like domain of FAT10. Differences are also observed in a hydrophobic platform between the core and the first catalytic half domain and the adenylation active site in the core, which together from the binding sites for ubiquitin and FAT10. Site directed mutagenesis of key residues in these areas altered the UBA6-catalyzed activation of ubiquitin and FAT10. UBA6 variants were generated with the goal of trying to block the activation of FAT10 while still maintaining that of ubiquitin activation, in order to fully explain the dual specificity of UBA6. However, none of these mutations could block the activation of FAT10, while some of these UBA6 variants blocked ubiquitin activation. Preliminary inhibition assays with a group of E1 inhibitors belonging to the adenosyl sulfamate family demonstrated potent inhibition of FAT10ylation for two compounds. The dual specificity of UBA6 hence needs to be further examined by biochemical and structural methods. In particular, the structure of a complex between UBA6 and ubiquitin or FAT10 would provide key insights for further biochemical studies, ultimately allowing the targeted inhibition of the FAT10ylation machinery.},
  language  = {en}
}
@phdthesis{Nguyen2012,
  author    = {Nguyen, Danh Nam},
  title     = {Understanding the development of the proving process within a dynamic geometry environment},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-71754},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {Argumentation and proof have played a fundamental role in mathematics education in recent years. The author of this dissertation would like to investigate the development of the proving process within a dynamic geometry system in order to support tertiary students understanding the proving process. The strengths of this dynamic system stimulate students to formulate conjectures and produce arguments during the proving process. Through empirical research, we classified different levels of proving and proposed a methodological model for proving. This methodological model makes a contribution to improve students' levels of proving and develop their dynamic visual thinking. We used Toulmin model of argumentation as a theoretical model to analyze the relationship between argumentation and proof. This research also offers some possible explanation so as to why students have cognitive difficulties in constructing proofs and provides mathematics educators with a deeper understanding on the proving process within a dynamic geometry system.},
  subject      = {Argumentation},
  language  = {en}
}
@phdthesis{Lama2016,
  author    = {Lama, Anu Kumari},
  title     = {Understanding Institutional Adaptation to Climate Change: Social Resilience and Adaptive Governance Capacities of the Nature Based Tourism Institutions in the Annapurna Conservation Area, Nepal},
  publisher = {W{\"u}rzburg University Press},
  address   = {W{\"u}rzburg},
  isbn      = {978-3-95826-034-4 (print)},
  issn      = {0510-9833 (print)},
  doi       = {10.25972/WUP-978-3-95826-035-1},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-131351},
  school      = {W{\"u}rzburg University Press},
  pages     = {208},
  year      = {2016},
  abstract  = {The global-local sustainable development and climate change adaptation policy, and the emerging political discourse on the value of local Adaptation, have positioned the local institutions and their governance space within the strategic enclaves of multilevel governance system. Such shifts have transformed the context for sustainable Nature Based Tourism (NBT) development and adaptation in Nepal in general, and its protected areas, in particular. The emerging institutional adaptation discourse suggests on the need to link tourism development, adaptation and governance within the sustainability concept, and also to recognize the justice and inclusive dimensions of local adaptation. However, sociological investigation of institutional adaptation, particularly at the interface between sustainability, justice and inclusive local adaptation is an undertheorized research topic. This exploratory study examined the sociological process of the institutional adaptation, especially the social resilience and adaptive governance capacities of the NBT institutions, in 7 Village Development Committees of the Mustang district, a popular destination in the Annapurna Conservation Area, Nepal. Using the sphere (a dynamic social space concept) and quality of governance as the analytical framework, the integrative adaptation as the methodological approach and the case study action research method, the study investigated and generated a holistic picture on the state of the social resilience and adaptive governance capacities of the NBT institutions. The findings show institutional social resilience capacities to be contingent on socio-political construction of adaptation knowledge and power. Factors influencing such constructions among NBT institutions include: the site and institutions specific political, economic and environmental dispositions; the associated socio-political processes of knowledge constructions and volition action; and the social relationships and interaction, operating within the spheres and at multiple governance levels. The adaptive governance capacities hinge on the institutional arrangements, the procedural aspects of adaptation governance and the governmentality. These are reflective of the diverse legal frameworks, the interiority perspective of the decision making and governance practices of the NBT institutions. In conclusion, it is argued that effective local adaptation in the Mustang district is contingent on the adaptation and institutional dynamics of the NBT institutions, consisting of the cognitive, subjective, process and procedural aspects of the adaptation knowledge production and its use.},
  subject      = {Annapurna Conservation Area},
  language  = {en}
}
@phdthesis{Becker2018,
  author    = {Becker, Martin},
  title     = {Understanding Human Navigation using Bayesian Hypothesis Comparison},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-163522},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2018},
  abstract  = {Understanding human navigation behavior has implications for a wide range of application scenarios. For example, insights into geo-spatial navigation in urban areas can impact city planning or public transport. Similarly, knowledge about navigation on the web can help to improve web site structures or service experience. In this work, we focus on a hypothesis-driven approach to address the task of understanding human navigation: We aim to formulate and compare ideas — for example stemming from existing theory, literature, intuition, or previous experiments — based on a given set of navigational observations. For example, we may compare whether tourists exploring a city walk "short distances" before taking their next photo vs. they tend to "travel long distances between points of interest", or whether users browsing Wikipedia "navigate semantically" vs. "click randomly". For this, the Bayesian method HypTrails has recently been proposed. However, while HypTrails is a straightforward and flexible approach, several major challenges remain: i) HypTrails does not account for heterogeneity (e.g., incorporating differently behaving user groups such as tourists and locals is not possible), ii) HypTrails does not support the user in conceiving novel hypotheses when confronted with a large set of possibly relevant background information or influence factors, e.g., points of interest, popularity of locations, time of the day, or user properties, and finally iii) formulating hypotheses can be technically challenging depending on the application scenario (e.g., due to continuous observations or temporal constraints). In this thesis, we address these limitations by introducing various novel methods and tools and explore a wide range of case studies. In particular, our main contributions are the methods MixedTrails and SubTrails which specifically address the first two limitations: MixedTrails is an approach for hypothesis comparison that extends the previously proposed HypTrails method to allow formulating and comparing heterogeneous hypotheses (e.g., incorporating differently behaving user groups). SubTrails is a method that supports hypothesis conception by automatically discovering interpretable subgroups with exceptional navigation behavior. In addition, our methodological contributions also include several tools consisting of a distributed implementation of HypTrails, a web application for visualizing geo-spatial human navigation in the context of background information, as well as a system for collecting, analyzing, and visualizing mobile participatory sensing data. Furthermore, we conduct case studies in many application domains, which encompass — among others — geo-spatial navigation based on photos from the photo-sharing platform Flickr, browsing behavior on the social tagging system BibSonomy, and task choosing behavior on a commercial crowdsourcing platform. In the process, we develop approaches to cope with application specific subtleties (like continuous observations and temporal constraints). The corresponding studies illustrate the variety of domains and facets in which navigation behavior can be studied and, thus, showcase the expressiveness, applicability, and flexibility of our methods. Using these methods, we present new aspects of navigational phenomena which ultimately help to better understand the multi-faceted characteristics of human navigation behavior.},
  subject      = {Bayes-Verfahren},
  language  = {en}
}
@phdthesis{Rudolf2014,
  author    = {Rudolf, Philipp Benjamin},
  title     = {Uncovering photoinduced chemical reaction pathways in the liquid phase with ultrafast vibrational spectroscopy},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-96200},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {The experimental technique predominantly employed within the scope of this Thesis constitutes one subarea of femtochemistry: the time-resolved spectroscopy of photoin- duced chemical reactions in the liquid phase by means of molecular signatures in the mid-infrared (MIR) spectral range. Probing transient vibrational states, i.e., dynamic changes in the vibrational motion of speci� c molecular subunits or functional Groups allows for a distinct separation and assignment of measured signals to emerging molecular species. For this purpose, one key building block is indispensable, which most of the investigations carried out within the � eld of femtochemistry have in common: a coherent light source delivering ultrashort laser pulses with a temporal duration that matches the femtosecond time scale on which molecular motions typically occur. This instrumentation enables the observation of photoinduced chemical reactions from the starting point|the excitation event to the appearance of intermediates to the nal formation of stable photoproducts after several pico- or nanoseconds. This work comprises the acquisition and presentation of time-resolved spectroscopic data related to promising molecular systems upon photoexcitation as well as the im- plementation and testing of experimental optical techniques both for the presented experiments but as well for experiments conceivable in the future. In addition, linear spectroscopy measurements and quantum-chemical simulations on the emerging chemical species have been carried out. In so doing, the primary processes and subse- quently emerging reaction products of two compounds on a timescale of several nanoseconds after photoexcitation have been elucidated in great detail. Both compounds, the [Mn(CO)3(tpm)]+ (tpm = tris(2-pyrazolyl)methane) CO-releasing molecule (CORM) and the 5-diazo Meldrum's acid (DMA), are of academic interest but in addition belong to molecular classes that might be utilized in the near future as dark-stable prodrugs under physiological conditions or that are already utilized in industrial chemistry procedures, respectively. The � ndings of both studies gave rise to implement and examine two techniques for prospective transient absorption experiments, namely the shaping and characterization of ultraviolet (UV) laser pulses and the recording of two-photon excitation spectra. Beyond that, since each of the depicted experiments is based on the detection of weak transient absorption signals in the MIR spectral region, two dif- ferent detection schemes, via chirped-pulse upconversion (CPU) on the one hand and via direct multichannel MCT detection on the other hand, have been juxtaposed at the conclusion of this work. Since both techniques are suitable in femtosecond pump-probe measurements but thereby exhibit individual strengths and weaknesses, a comparative study provides clari� cation of the respective pros and cons. The � first study introduced within this work investigates the complex photochemistry of DMA, a photoactive compound used in lithography and industrial chemistry. By femtosecond MIR transient absorption spectroscopy covering several nanoseconds, the light-induced dynamics and ultrafast formation of several photoproducts from the manifold of reaction pathways have been disclosed to form a coherent picture of the overall reaction scheme. After UV excitation of DMA dissolved in methanol to the second excited state S2, 70\% of excited molecules relax back to the S0 ground state. In compet- ing processes, they can either undergo an intramolecular Wolff rearrangement to form ketene, which reacts with a solvent molecule to an enol intermediate and further to carboxylate ester, or they � rst relax to the DMA S1 state, from where they can isomerize to a diazirine. The third competing reaction channel, having the lowest quantum efficiency with respect to the � rst two channels, is the formation of a singlet carbene out of the S1 state. From there an ylide can arise or, via an intersystem crossing, the triplet form of the carbene follows. Whereas the primary reaction steps occur on a picosecond timescale, the subsequently arising intermediates and stable photoproducts are formed within a few hundreds to thousands of picoseconds. For a reliable identi� cation of the involved compounds, density functional theory calculations on the normal modes and Fourier-transform infrared spectroscopy of the reactant and the photoproducts in the chemical equilibrium accompany the analysis of the transient spectra. Additional experiments in ethanol and isopropanol led to slight spectral shifts as well as elongated time constants due to steric hindrance in transient spectra connected with the ester Formation channel, further substantiating the assignment of the occurring reaction pathways and photoproducts. The study demonstrated that the combination of linear and time-resolved spectroscopic measurements in conjunction with quantum-chemical calculations constitutes a powerful tool to unravel even highly complex photoreactions exhibiting multiple consecutive intermediate states within parallel reaction pathways. Although some of the individual reaction steps, for example the ketene formation via Wolff rearrangement, have been observed on ultrashort time scales before, this work encompassed the Observation of the whole set of appearing photoproducts of DMA in different alcohol solutions within several nanoseconds. In this sense, the ultrafast photochemistry of DMA represents a prototype example for a multisequential reaction scheme, elucidated by the capabilities of femtosecond MIR spectroscopy. With a modi� fied instrumentation concerning amongst others the system delivering the fundamental laser pulses or the generation of the UV pump pulses, the next ob- jective within this work was to elucidate the primary processes upon UV Irradiation of a manganese tricarbonyl CORM in aqueous environment. The time-resolved experiment was performed with two different pump wavelengths and furthermore supported by linear spectroscopy methods and time-dependent density functional theory (TDDFT) calculations on the excited states as well as DFT calculations on the ground states. The measurements revealed that irradiating the compound with UV excitation pulses primarily leads to ultrafast photolysis of one CO ligand. Geminate recombination may occur within one picosecond but it remains a minor process as the photolyzed CO group is liberated and the unoccupied coordination site is predominantly fi� lled by an incoming solvent molecule. There was no evidence for hot CO bands, i.e., the remaining CO ligands|in the dicarbonyl photoproduct as well as in the intact CORM are not vibrationally excited through the UV excitation of the CORM. According to this, the excess energy merges into low-frequency vibrational modes associated with the molecule as a whole. Since studies on a macroscopic scale at irradiation times of several minutes prove that UV irradiation eventually leads to the release of two or even all three CO ligands, further loss of CO most likely necessitates manganese oxidation or another interaction with light. To clarify the latter, a consecutive UV pulse was employed in order to excite the photoproducts subsequent to the initial pump interaction. However, the data obtained was not instructive enough to de� nitely exclude the manganese oxidation being responsible for the loss of further CO groups. Besides the exchange of a CO Group by a solvent molecule or the geminate recombination, the employment of two different excitation wavelengths in combination with � ndings derived from the TDDFT calculations suggested another reaction process, namely the possibility that the excitation does not lead to any bond cleavage at all. As the CORM under investigation is tissue-selective and cytotoxic against cancer cells, knowledge of these � rst photoinduced reaction steps is essential for a full understanding of its biological activity. Inspired by these two studies, experimental techniques for prospective transient absorption measurements have been implemented and tested within preparative measure- ments. First, in the course of a UV-pump-MIR-probe experiment with speci� cally tailored excitation pulses, one could pursue the aim of coherently controlling the outcome of a photoreaction in the liquid phase. Out of the rich photochemistry of DMA the vibrational signature of a particular molecular species might thereby serve as a feedback signal, which is a central part of a learning loop that adaptively determines the pulse shape that steers the quantum mechanical system upon photoexcitation into a desired direction. This motivated the installation and testing of devices by means of which the shaping and characterization of ultrashort laser pulses in the UV could be performed. Second, motivated by the biological applications of CORMs, one can imagine a scenario where a certain amount of CORMs is deposited inside cancerous tissue. Since the activation of CO loss by means of UV pulses is not possible due to the absorption characteristics of biological tissue, the simultaneous excitation via two photons from the visible spectral regime seems appealing. However, success or failure of such an application depends on whether the deposited compound efficiently absorbs two photons simultaneously, i.e., whether the two-photon absorption cross section is large enough. Therefore, a setup to record two-photon excitation spectra under full consideration of the crucial laser pulse parameters like the pulse duration, energy and central wavelength was arranged and tested. The � rst results were obtained with a commercially available reference system (Mn2CO10) but the setup as well as the described measurement and data analysis procedure can easily be applied to record the two-photon absorption cross section of more promising molecular systems. Third, as the detection of probe pulses in the MIR spectral region is part of each time-resolved measurement throughout this thesis, a comparison between the newly established technique of CPU and direct multi- channel MCT detection is presented by means of pump{probe experiments on Mn2CO10 and Co4CO12 with a 1 kHz shot-to-shot data acquisition. It was shown that the CPU detection technique scores with its high spectral resolution and coverage of the easy-to-handle and more cost-effective CCD detectors. On the other hand, in the course of the additional nonlinear upconversion process intensity fluctuations of the chirped fundamental pulses are transferred to the probe spectrum in the visible regime. This entails a lower signal-to-noise ratio than the direct MCT detection, which can be compensated by an additional normalization procedure applied to the CPU probe pulses. As a consequence, the CPU detection scheme offers more flexibility for future investigations employing MIR probe pulses. This is of great importance for many applications within the presented � eld of femtochemistry as a huge variety of time-resolved investigations on a multitude of systems in the liquid phase is based on the detection of weak transient absorption signals in the MIR spectral region.},
  subject      = {Ultrakurzzeitspektroskopie},
  language  = {en}
}
@phdthesis{Kiesel2012,
  author    = {Kiesel, Maximilian Ludwig},
  title     = {Unconventional Superconductivity in Cuprates, Cobaltates and Graphene: What is Universal and what is Material-Dependent in strongly versus weakly Correlated Materials?},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-76421},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {Eine allgemeing{\"u}ltige Theorie f{\"u}r alle unterschiedlichen Arten von unkonventionellen Supraleitern ist immer noch eine der ungel{\"o}sten Kernfragen der Festk{\"o}rperphysik. Momentan ist es nicht einmal bewiesen, dass es {\"u}berhaupt einen gemeinsamen grundlegenden Mechanismus gibt, sondern es m{\"u}ssen vielleicht mehrere verschiedene Ursachen f{\"u}r unkonventionelle Supraleitung ber{\"u}cksichtigt werden. Der Einfluss der Elektron-Phonon-Wechselwirkung ist dabei noch nicht abschließend gekl{\"a}rt. In dieser Dissertation wird ein rein elektronischer Paarungsmechanismus untersucht, in welchem die Paarung durch Spin-Fluktuationen vermittelt wird, was nach dem aktuellen Stand der Forschung auf dem Gebiet der unkonventionellen Supraleiter am wahrscheinlichsten ist. Der Schwerpunkt liegt dabei auf der Bestimmung von Material-unabh{\"a}ngigen Eigenschaften der supraleitenden Phase. Diese k{\"o}nnen durch eine Auswahl sehr unterschiedlicher Systeme herausgearbeitet werden. Eine Untersuchung der Phasendiagramme gibt außerdem Auskunft dar{\"u}ber, welche konkurrierenden Quantenfluktuationen den supraleitenden Zustand abschw{\"a}chen oder verst{\"a}rken. F{\"u}r diese Analyse von sehr unterschiedlichen supraleitenden Materialien ist der Einsatz einer einzelnen numerischen L{\"o}sungsmethode unzureichend. F{\"u}r diese Dissertation ist dies aber kein Nachteil, sondern vielmehr ein großer Vorteil, da der Einsatz verschiedener Techniken die Abh{\"a}ngigkeit der Ergebnisse von der verwendeten Numerik reduziert und dadurch der grundlegende Mechanismus besser untersucht werden kann. Im speziellen werden in dieser Dissertation die Kuprate mit der Variationellen Clustern{\"a}herung ausgewertet, weil die Elektronen hier eine starke Wechselwirkung untereinander besitzen. Besonders die Frage eines m{\"o}glichen Klebstoffs f{\"u}r die Cooper-Paare wird ausf{\"u}hrlich diskutiert, auch mit einer Unterscheidung in retardierte und nicht-retardierte Betr{\"a}ge. Den Kupraten werden das Kobaltat NaCoO sowie Graphen gegen{\"u}bergestellt. Diese Materialien sind jedoch schwach korrelierte Systeme, so dass hier die Funkionelle Renormierungsgruppe als numerisches Grundger{\"u}st dient. Die Ergebnisse sind reichhaltige Phasendiagramme mit vielen verschiedenen langreichweitigen Ordnungen, wie zum Beispiel d+id-wellenartige Supraleitung. Diese bricht die Zeitumkehr-Symmetrie und besitzt eine vollst{\"a}ndige Bandl{\"u}cke, welche im Falle von NaCoO jedoch eine stark Dotierungs-abh{\"a}ngige Anisotropie aufweist. Als letztes wird das Kagome-Gitter allgemein diskutiert, ohne ein konkretes Material zu beschreiben. Hier hat eine destruktive Interferenz zwischen den Elektronen auf verschiedenen Untergittern drastische Auswirkungen auf die Instabilit{\"a}ten der Fermi-Fl{\"a}che, so dass die {\"u}bliche Spin-Dichte-Welle und die damit verbundene d+id-wellenartige Supraleitung unterdr{\"u}ckt werden. Dadurch treten ungew{\"o}hnliche Spin- und Ladungsdichte-Ordnungen sowie eine nematische Pomeranchuck Instabilit{\"a}t hervor. Zusammengefasst bietet diese Dissertation einen Einblick in unterschiedliche Materialklassen von unkonventionellen Supraleitern. Dadurch wird es m{\"o}glich, die Material-spezifischen Eigenschaften von den universellen zu trennen.},
  subject      = {Supraleitung},
  language  = {en}
}
@phdthesis{Fink2019,
  author    = {Fink, Mario},
  title     = {Unconventional and topological superconductivity in correlated non-centrosymmetric systems with spin-orbit coupling},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-175034},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2019},
  abstract  = {Despite its history of more than one hundred years, the phenomenon of superconductivity has not lost any of its allure. During that time the concept and perception of the superconducting state - both from an experimental and theoretical point of view - has evolved in way that has triggered increasing interest. What was initially believed to simply be the disappearance of electrical resistivity, turned out to be a universal and inevitable result of quantum statistics, characterized by many more aspects apart from its zero resistivity. The insights of BCS-theory eventually helped to uncover its deep connection to particle physics and consequently led to the formulation of the Anderson-Higgs-mechanism. The very core of this theory is the concept of gauge symmetry (breaking). Within the framework of condensed-matter theory, gauge invariance is only one of several symmetry groups which are crucial for the description and classification of superconducting states. \\ In this thesis, we employ time-reversal, inversion, point group and spin symmetries to investigate and derive possible Hamiltonians featuring spin-orbit interaction in two and three spatial dimensions. In particular, this thesis aims at a generalization of existing numerical concepts to open up the path to spin-orbit coupled (non)centrosymmetric superconductors in multi-orbital models. This is done in a two-fold way: On the one hand, we formulate - based on the Kohn-Luttinger effect - the perturbative renormalization group in the weak-coupling limit. On the other hand, we define the spinful flow equations of the effective action in the framework of functional renormalization, which is valid for finite interaction strength as well. Both perturbative and functional renormalization groups produce a low-energy effective (spinful) theory that eventually gives rise to a particular superconducting state, which is investigated on the level of the irreducible two-particle vertex. The symbiotic relationship between both perturbative and functional renormalization can be traced back to the fact that, while the perturbative renormalization at infinitesimal coupling is only capable of dealing with the Cooper instability, the functional renormalization can investigate a plethora of instabilities both in the particle-particle and particle-hole channels. \\ Time-reversal and inversion are the two key symmetries, which are being used to discriminate between two scenarios. If both time-reversal and inversion symmetry are present, the Fermi surface will be two-fold degenerate and characterized by a pseudospin degree of freedom. In contrast, if inversion symmetry is broken, the Fermi surface will be spin-split and labeled by helicity. In both cases, we construct the symmetry allowed states in the particle-particle as well as the particle-hole channel. The methods presented are formally unified and implemented in a modern object-oriented reusable and extendable C++ code. This methodological implementation is employed to one member of both families of pseudospin and helicity characterized systems. For the pseudospin case, we choose the intriguing matter of strontium ruthenate, which has been heavily investigated for already twenty-four years, but still keeps puzzling researchers. Finally, as the helicity based application, we consider the oxide heterostructure LaAlO\$_{3}\$/SrTiO\$_{3}\$, which became famous for its highly mobile two- dimensional electron gas and is suspected to host topological superconductivity.},
  subject      = {Quanten-Vielteilchensysteme},
  language  = {en}
}
@phdthesis{Elsner2022,
  author    = {Elsner, Clara Dorothea},
  title     = {Ultrastructural analysis of biogenesis and release of endothelial extracellular vesicles},
  doi       = {10.25972/OPUS-28852},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-288526},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Extracellular vesicle (EV)-mediated intercellular communication through exosomes, microvesicles (MVs) and apoptotic bodies has been shown to be implicated in various physiological as well as pathological processes such as the development and progression of atherosclerosis. While the cellular machinery controlling EV formation and composition has been studied extensively, little is known about the underlying morphological processes. This study focuses on a detailed ultrastructural analysis of the different steps of EV formation and release in Myocardial Endothelial (MyEnd) and Aortic Endothelial (AoEnd) cells cultured under serum starvation and inflammatory stimulation with TNF-α. Detailed morphological analyses were conducted applying and comparing different high- resolution light and electron microscopic methods. In this study, we could depict all steps of MV biogenesis named in literature. However, during the study of exosome biogenesis, we discovered a yet undescribed process: Instead of a direct fusion with the plasma membrane, multivesicular bodies were incorporated into a new distinct cellular compartment bound by fenestrated endothelium first. This may present a novel step in exosome biogenesis and warrants further study. Regarding the conditions of cell cultivation, we observed that the commonly used serum starvation causes MyEnd cells, but not AoEnd cells, to enter apoptosis after 48 hours. When preparing functional EV studies, we therefore recommend assessing the morphological condition of the serum-starved cells at different cultivation points first. When evaluating MV production, a statistical analysis showed that the more time AoEnd cells spent in cultivation under serum starvation, the higher the percentage of MV producing cells. However, additional TNF-α stimulation induced a significantly higher MV production than serum starvation alone. Lastly, our results show that TNF-α stimulation of AoEnd cells in vitro leads to the upregulation of CD44, an adhesion molecule critical in the early stages of atherosclerosis. CD44 was then depicted on the surface of generated MVs and exosomes. We conclude that under inflammatory conditions, EVs can mediate the transfer of CD44 from endothelial cells to target cells. This could be a novel mechanism by which MVs contribute to the development and progression of atherosclerotic disease and should be clarified by further studies.},
  subject      = {Vesikel},
  language  = {en}
}
@phdthesis{Dietzek2005,
  author    = {Dietzek, Benjamin},
  title     = {Ultrafast linear and non-linear spectroscopy : from biological light-receptors to artificial light-harvesting systems},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-15684},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2005},
  abstract  = {In the experiments presented in this work, linear and non-linear femtosecond time-resolved spectrsocopy were applied to investigate the structure-function and functiondynamics relationship in biological and artificially designed systems. The experiments presented in this work utilize femtosecond time-resolved transient absorption and transient grating as well as picosecond time-resolved fluorescence spectroscopy to investigate the photophysics and photochemistry of biological photoreceptors and address the light-induced excited-state processes in a particular molecular device that serves as a - structurally - very simple light-harvesting antenna and potentially as a catalysis-switch for the production of hydrogen in solution. The combination of white-light probe transient absorption and coherent transient grating spectroscopies yields spectral information about the excited state absorption in concert with high quality, high signal-to-noise kinetic transients, which allow for precise fitting and therefore very accurate time-constants to be extracted from the data. The use of femtosecond time-resolved transient grating spectroscopy is relatively uncommon in addressing questions concerning the excited-state reaction pathways of complex (biological) systems, and therefore the experiments presented in this work constitute according to the literature the first studies applying this technique to a a metalloporphyrin and an artificial light-harvesting antenna.},
  subject      = {Femtosekundenspektroskopie},
  language  = {en}
}
@phdthesis{Drobczyk2024,
  author    = {Drobczyk, Martin},
  title     = {Ultra-Wideband Wireless Network for Enhanced Intra-Spacecraft Communication},
  doi       = {10.25972/OPUS-35956},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-359564},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {Wireless communication networks already comprise an integral part of both the private and industrial sectors and are successfully replacing existing wired networks. They enable the development of novel applications and offer greater flexibility and efficiency. Although some efforts are already underway in the aerospace sector to deploy wireless communication networks on board spacecraft, none of these projects have yet succeeded in replacing the hard-wired state-of-the-art architecture for intra-spacecraft communication. The advantages are evident as the reduction of the wiring harness saves time, mass, and costs, and makes the whole integration process more flexible. It also allows for easier scaling when interconnecting different systems. This dissertation deals with the design and implementation of a wireless network architecture to enhance intra-spacecraft communications by breaking with the state-of-the-art standards that have existed in the space industry for decades. The potential and benefits of this novel wireless network architecture are evaluated, an innovative design using ultra-wideband technology is presented. It is combined with a Medium Access Control (MAC) layer tailored for low-latency and deterministic networks supporting even mission-critical applications. As demonstrated by the Wireless Compose experiment on the International Space Station (ISS), this technology is not limited to communications but also enables novel positioning applications. To adress the technological challenges, extensive studies have been carried out on electromagnetic compatibility, space radiation, and data robustness. The architecture was evaluated from various perspectives and successfully demonstrated in space. Overall, this research highlights how a wireless network can improve and potentially replace existing state-of-the-art communication systems on board spacecraft in future missions. And it will help to adapt and ultimately accelerate the implementation of wireless networks in space systems.},
  subject      = {Raumfahrttechnik},
  language  = {en}
}
@phdthesis{Bustamante2014,
  author    = {Bustamante, Mauricio},
  title     = {Ultra-high-energy neutrinos and cosmic rays from gamma-ray bursts: exploring and updating the connection},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-112480},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {It is natural to consider the possibility that the most energetic particles detected (> 10^18 eV), ultra-high-energy cosmic rays (UHECRs), are originated at the most luminous transient events observed (> 10^52 erg s^-1), gamma-ray bursts (GRBs). As a result of the interaction of highly-accelerated, magnetically-confined protons and ions with the photon field inside the burst, both neutrons and UHE neutrinos are expected to be created: the former escape the source and beta-decay into protons which propagate to Earth, where they are detected as UHECRs, while the latter, if detected, would constitute the smoking gun of hadronic acceleration in the sources. Recently, km-scale neutrino telescopes such as IceCube have finally reached the sensitivities required to probe the neutrino predictions of some of the existing GRB models. On that account, we present here a revised, self-consistent model of joint UHE proton and neutrino production at GRBs that includes a state-of-the-art, improved numerical calculation of the neutrino flux (NeuCosmA); that uses a generalised UHECR emission model where some of the protons in the sources are able to "leak out" of their magnetic confinement before having interacted; and that takes into account the energy losses of the protons during their propagation to Earth. We use our predictions to take a close look at the cosmic ray-neutrino connection and find that the current UHECR observations by giant air shower detectors, together with the upper bounds on the flux of neutrinos from GRBs, are already sufficient to put tension on several possibilities of particle emission and propagation, and to point us towards some requirements that should be fulfilled by GRBs if they are to be the sources of the UHECRs. We further refine our analysis by studying a dynamical burst model, where we find that the different particle species originate at distinct stages of the expanding GRB, each under particular conditions. Finally, we consider a possibility of new physics: the effect of neutrino decay in the flux of UHE neutrinos from GRBs. On the whole, our results demonstrate that self-consistent models of particle production are now integral to the advancement of the field, given that the full picture of the UHE Universe will only emerge as a result of looking at the multi-messenger sky, i.e., at gamma-rays, cosmic rays, and neutrinos simultaneously.},
  subject      = {Gamma-Burst},
  language  = {en}
}
@phdthesis{Freiberg2015,
  author    = {Freiberg, Martina},
  title     = {UI-, User-, \& Usability-Oriented Engineering of Participative Knowledge-Based Systems},
  publisher = {W{\"u}rzburg University Press},
  isbn      = {978-3-95826-012-2 (print)},
  doi       = {10.25972/WUP-978-3-95826-013-9},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-106072},
  school      = {W{\"u}rzburg University Press},
  pages     = {232},
  year      = {2015},
  abstract  = {Knowledge-based systems (KBS) face an ever-increasing interest in various disciplines and contexts. Yet, the former aim to construct the 'perfect intelligent software' continuously shifts to user-centered, participative solutions. Such systems enable users to contribute their personal knowledge to the problem solving process for increased efficiency and an ameliorated user experience. More precisely, we define non-functional key requirements of participative KBS as: Transparency (encompassing KBS status mediation), configurability (user adaptability, degree of user control/exploration), quality of the KB and UI, and evolvability (enabling the KBS to grow mature with their users). Many of those requirements depend on the respective target users, thus calling for a more user-centered development. Often, also highly expertise domains are targeted — inducing highly complex KBs — which requires a more careful and considerate UI/interaction design. Still, current KBS engineering (KBSE) approaches mostly focus on knowledge acquisition (KA) This often leads to non-optimal, little reusable, and non/little evaluated KBS front-end solutions. In this thesis we propose a more encompassing KBSE approach. Due to the strong mutual influences between KB and UI, we suggest a novel form of intertwined UI and KB development. We base the approach on three core components for encompassing KBSE: (1) Extensible prototyping, a tailored form of evolutionary prototyping; this builds on mature UI prototypes and offers two extension steps for the anytime creation of core KBS prototypes (KB + core UI) and fully productive KBS (core KBS prototype + common framing functionality). (2) KBS UI patterns, that define reusable solutions for the core KBS UI/interaction; we provide a basic collection of such patterns in this work. (3) Suitable usability instruments for the assessment of the KBS artifacts. Therewith, we do not strive for 'yet another' self-contained KBS engineering methodology. Rather, we motivate to extend existing approaches by the proposed key components. We demonstrate this based on an agile KBSE model. For practical support, we introduce the tailored KBSE tool ProKEt. ProKEt offers a basic selection of KBS core UI patterns and corresponding configuration options out of the box; their further adaption/extension is possible on various levels of expertise. For practical usability support, ProKEt offers facilities for quantitative and qualitative data collection. ProKEt explicitly fosters the suggested, intertwined development of UI and KB. For seamlessly integrating KA activities, it provides extension points for two selected external KA tools: For KnowOF, a standard office based KA environment. And for KnowWE, a semantic wiki for collaborative KA. Therewith, ProKEt offers powerful support for encompassing, user-centered KBSE. Finally, based on the approach and the tool, we also developed a novel KBS type: Clarification KBS as a mashup of consultation and justification KBS modules. Those denote a specifically suitable realization for participative KBS in highly expertise contexts and consequently require a specific design. In this thesis, apart from more common UI solutions, we particularly also introduce KBS UI patterns especially tailored towards Clarification KBS.},
  subject      = {Wissensbasiertes System},
  language  = {en}
}
@phdthesis{Gerend2012,
  author    = {Gerend, Jennifer},
  title     = {U.S. and German Approaches to Regulating Retail Development: Urban Planning Tools and Local Policies},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-70257},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {This dissertation examines retail development regulation in the U.S. and in Germany, comparing the various urban planning tools and policies in use by municipal governments. These similarities and differences are explored through research into three case study cities in each country, with special attention paid to how these governments regulate large-scale or "big box" retail.},
  subject      = {Einzelhandel},
  language  = {en}
}
@phdthesis{Swiderek2005,
  author    = {Swiderek, Halina},
  title     = {Typing and genome comparison of Neisseria meningitidis by DNA-microarrays},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-13374},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2005},
  abstract  = {In the present thesis, two projects on the use of microarray technology for molecular epidemiology of Neisseria meningitidis have been followed. The first one evaluated microarrays based on polymorphism-directed oligonucleotide design for typing of N. meningitidis adopting the multilocus sequence typing (MLST) concept. The number of oligonucleotides needed to cover all known polymorphisms was much lower compared to the number needed if a tiling strategy would have been chosen. Initial experiments using oligonucleotides 28-32 nucleotides in length, revealed that the applied hybridisation protocols were highly specific. However, despite of several optimisation steps, the rate of misidentification of oligonucleotides remained >1.8\% in consecutive validation experiments using arrays representing the genetic diversity at three MLST loci. This finding led to the assumption that the high density of polymorphic sites and extensive GC-content variations at N. meningitidis MLST loci hindered the successful implementation of MLST microarrays based on polymorphism-directed oligonucleotide design. In the 1980s, the ET-15 clone emerged within the ST-11 complex of N. meningitidis. This new clone was associated with severe meningococcal disease and outbreaks world-wide. Therefore, the goal of the second project was to identify genetic differences between ET-15 strains and other ST-11 strains using whole genome microarray technology. Three genes encoding hypothetical proteins were identified to be present in all ET-15 strains but absent in other ST-11 strains. This finding together with unpublished observation from our group suggested that several genome alterations occurred before the clonal expansion of the ET-15 clone started. The role that these three genes play in the pathogenicity of the ET-15 clone is unclear. The genome comparisons revealed furthermore that studies of the ET-15 clone displayed approximately two-fold less gene content variation than ST-11 strains not belonging to the ET-15 clone. This finding is in accordance with the recent emergence and clonal expansion of the ET-15 variant.},
  subject      = {Neisseria meningitis},
  language  = {en}
}
@phdthesis{Brehm2009,
  author    = {Brehm, Sascha},
  title     = {Two-Particle Excitations in the Hubbard Model for High-Temperature Superconductors: A Quantum Cluster Study},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-38719},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2009},
  abstract  = {Two-particle excitations, such as spin and charge excitations, play a key role in high-Tc cuprate superconductors (HTSC). Due to the antiferromagnetism of the parent compound the magnetic excitations are supposed to be directly related to the mechanism of superconductivity. In particular, the so-called resonance mode is a promising candidate for the pairing glue, a bosonic excitation mediating the electronic pairing. In addition, its interactions with itinerant electrons may be responsible for some of the observed properties of HTSC. Hence, getting to the bottom of the resonance mode is crucial for a deeper understanding of the cuprate materials . To analyze the corresponding two-particle correlation functions we develop in the present thesis a new, non-perturbative and parameter-free technique for T=0 which is based on the Variational Cluster Approach (VCA, an embedded cluster method for one-particle Green's functions). Guided by the spirit of the VCA we extract an effective electron-hole vertex from an isolated cluster and use a fully renormalized bubble susceptibility chi0 including the VCA one-particle propagators.Within our new approach, the magnetic excitations of HTSC are shown to be reproduced for the Hubbard model within the relevant strong-coupling regime. Exceptionally, the famous resonance mode occurring in the underdoped regime within the superconductivity-induced gap of spin-flip electron-hole excitations is obtained. Its intensity and hourglass dispersion are in good overall agreement with experiments. Furthermore, characteristic features such as the position in energy of the resonance mode and the difference of the imaginary part of the susceptibility in the superconducting and the normal states are in accord with Inelastic Neutron Scattering (INS) experiments. For the first time, a strongly-correlated parameter-free calculation revealed these salient magnetic properties supporting the S=1 magnetic exciton scenario for the resonance mode. Besides the INS data on magnetic properties further important new insights were gained recently via ARPES (Angle-Resolved Photoemission-Spectroscopy) and Raman experiments which disclosed a quite different doping dependence of the antinodal compared to the near-nodal gap. This thesis provides an approach to the Raman response similar to the magnetic case for inspecting this gap dichotomy. In agreement with experiments and one-particle data obtained in the VCA, we recover the antinodal gap decreasing and the near-nodal gap increasing as a function of doping. Hence, our results prove the Hubbard model to account for these salient gap features. In summary, we develop a two-particle cluster approach which is appropriate for the strongly-correlated regime and contains no free parameter. Our results obtained with this new approach combined with the phase diagram and the one-particle excitations obtained in the VCA strongly constitute a Hubbard model description of HTSC cuprate materials.},
  subject      = {Hochtemperatursupraleiter},
  language  = {en}
}
@phdthesis{Hoepfner2012,
  author    = {H{\"o}pfner, Philipp Alexander},
  title     = {Two-Dimensional Electron Systems at Surfaces — Spin-Orbit Interaction and Electronic Correlations},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-78876},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {This thesis addresses three different realizations of a truly two-dimensional electron system (2DES), established at the surface of elemental semiconductors, i.e., Pt/Si(111), Au/Ge(111), and Sn/Si(111). Characteristic features of atomic structures at surfaces have been studied using scanning tunneling microscopy and low energy electron diffraction with special emphasis on Pt deposition onto Si(111). Topographic inspection reveals that Pt atoms agglomerate as trimers, which represent the structural building block of phase-slip domains. Surprisingly, each trimer is rotated by 30° with respect to the substrate, which results in an unexpected symmetry breaking. In turn, this represents a unique example of a chiral structure at a semiconductor surface, and marks Pt/Si(111) as a promising candidate for catalytic processes at the atomic scale. Spin-orbit interactions (SOIs) play a significant role at surfaces involving heavy adatoms. As a result, a lift of the spin degeneracy in the electronic states, termed as Rashba effect, may be observed. A candidate system to exhibit such physics is Au/Ge(111). Its large hexagonal Fermi sheet is suggested to be spin-split by calculations within the density functional theory. Experimental clarification is obtained by exploiting the unique capabilities of three-dimensional spin detection in spin- and angle-resolved photoelectron spectroscopy. Besides verification of the spin splitting, the in-plane components of the spin are shown to possess helical character, while also a prominent rotation out of this plane is observed along straight sections of the Fermi surface. Surprisingly and for the first time in a 2DES, additional in-plane rotations of the spin are revealed close to high symmetry directions. This complex spin pattern must originate from crystalline anisotropies, and it is best described by augmenting the original Rashba model with higher order Dresselhaus-like SOI terms. The alternative use of group-IV adatoms at a significantly reduced coverage drastically changes the basic properties of a 2DES. Electron localization is strongly enhanced, and the ground state characteristics will be dominated by correlation effects then. Sn/Si(111) is scrutinized with this regard. It serves as an ideal realization of a triangular lattice, that inherently suffers from spin frustration. Consequently, long-range magnetic order is prohibited, and the ground state is assumed to be either a spiral antiferromagnetic (AFM) insulator or a spin liquid. Here, the single-particle spectral function is utilized as a fundamental quantity to address the complex interplay of geometric frustration and electronic correlations. In particular, this is achieved by combining the complementary strengths of ab initio local density approximation (LDA) calculations, state-of-the-art angle-resolved photoelectron spectroscopy, and the sophisticated many-body LDA+DCA. In this way, the evolution of a shadow band and a band backfolding incompatible with a spiral AFM order are unveiled. Moreover, beyond nearest-neighbor hopping processes are crucial here, and the spectral features must be attributed to a collinear AFM ground state, contrary to common expectation for a frustrated spin lattice.},
  subject      = {Halbleiteroberfl{\"a}che},
  language  = {en}
}
@phdthesis{Banik2023,
  author    = {Banik, Amitayus},
  title     = {Two Approaches to the Baryon Asymmetry of the Universe},
  doi       = {10.25972/OPUS-32046},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-320468},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {Explaining the baryon asymmetry of the Universe has been a long-standing problem of particle physics, with the consensus being that new physics is required as the Standard Model (SM) cannot resolve this issue. Beyond the Standard Model (BSM) scenarios would need to incorporate new sources of \(CP\) violation and either introduce new departures from thermal equilibrium or modify the existing electroweak phase transition. In this thesis, we explore two approaches to baryogenesis, i.e. the generation of this asymmetry. In the first approach, we study the two-particle irreducible (2PI) formalism as a means to investigate non-equilibrium phenomena. After arriving at the renormalised equations of motions (EOMs) to describe the dynamics of a phase transition, we discuss the techniques required to obtain the various counterterms in an on-shell scheme. To this end, we consider three truncations up to two-loop order of the 2PI effective action: the Hartree approximation, the scalar sunset approximation and the fermionic sunset approximation. We then reconsider the renormalisation procedure in an \(\overline{\text{MS}}\) scheme to evaluate the 2PI effective potential for the aforementioned truncations. In the Hartree and the scalar sunset approximations, we obtain analytic expressions for the various counterterms and subsequently calculate the effective potential by piecing together the finite contributions. For the fermionic sunset approximation, we obtain similar equations for the counterterms in terms of divergent parts of loop integrals. However, these integrals cannot be expressed in an analytic form, making it impossible to evaluate the 2PI effective potential with the fermionic contribution. Our main results are thus related to the renormalisation programme in the 2PI formalism: \( (i) \)the procedure to obtain the renormalised EOMs, now including fermions, which serve as the starting point for the transport equations for electroweak baryogenesis and \( (ii) \) the method to obtain the 2PI effective potential in a transparent manner. In the second approach, we study baryogenesis via leptogenesis. Here, an asymmetry in the lepton sector is generated, which is then converted into the baryon asymmetry via the sphaleron process in the SM. We proceed to consider an extension of the SM along the lines of a scotogenic framework. The newly introduced particles are charged odd under a \(\mathbb{Z}_2\) symmetry, and masses for the SM neutrinos are generated radiatively. The \(\mathbb{Z}_2\) symmetry results in the lightest BSM particle being stable, allowing for a suitable dark matter (DM) candidate. Furthermore, the newly introduced heavy Majorana fermionic singlets provide the necessary sources of \(CP\) violation through their Yukawa interactions and their out-of-equilibrium decays produce a lepton asymmetry. This model is constrained from a wide range of observables, such as consistency with neutrino oscillation data, limits on branching ratios of charged lepton flavour violating decays, electroweak observables and obtaining the observed DM relic density. We study leptogenesis in this model in light of the results of a Markov chain Monte Carlo scan, implemented in consideration of the aforementioned constraints. Successful leptogenesis in this model, to account for the baryon asymmetry, then severely constrains the available parameter space.},
  subject      = {Baryonenasymmetrie},
  language  = {en}
}
@phdthesis{Mahlmeister2023,
  author    = {Mahlmeister, Bernhard},
  title     = {Twisted Rylene Bisimides for Organic Solar Cells and Strong Chiroptical Response in the Near Infrared},
  doi       = {10.25972/OPUS-34610},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-346106},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2023},
  abstract  = {The chirality of the interlocked bay-arylated perylene motif is investigated upon its material prospect and the enhancement of its chiroptical response to the NIR spectral region. A considerable molecular library of inherently chiral perylene bisimides (PBIs) was utilized as acceptors in organic solar cells to provide decent device performances and insights into the structure-property relationship of PBI materials within a polymer blend. For the first time in the family of core-twisted PBIs, the effects of enantiopurity on the device performance was thoroughly investigated. The extraordinary structural sensitivity of CD spectroscopy served as crucial analytical tool to bridge the highly challenging gap between molecular properties and device analytics by proving the excitonic chirality of a helical PBI dimer. The chirality of this perylene motif could be further enhanced on a molecular level by both the expansion and the enhanced twisting of the π-scaffold to achieve a desirable strong chiroptical NIR response introducing a new family of twisted QBI-based nanoribbons. These achievements could be substantially further developed by expanding this molecular concept to a supramolecular level. The geometrically demanding supramolecular arrangement necessary for the efficient excitonic coupling was carefully encoded into the molecular design. Accordingly, the QBIs could form the first J-type aggregate constituting a fourfold-stranded superhelix of a rylene bisimide with strong excitonic chirality. Therefore, this thesis has highlighted the mutual corroboration of experimental and theoretical data from the molecular to the supramolecular level. It has demonstrated that for rylene bisimide dyes, the excitonic contribution to the overall chiroptical response can be designed and rationalized. This can help to pave the way for new organic functional materials to be used for chiral sensing or chiral organic light-emitting devices.},
  subject      = {Molek{\"u}l},
  language  = {en}
}
@phdthesis{Luetkenhaus2010,
  author    = {L{\"u}tkenhaus, Katharina},
  title     = {Tumour development in Raf-driven cancer mouse models},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-48332},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Metastasis is the cause of death in 90\% of cancer-related deaths in men. Melanoma and Non-Small-Cell Lung Cancer (NSCLC) are both tumour types with poor prognosis, lacking appropriate therapeutic possibilities, not least because of their high rate of metastasis. Thus understanding the process of metastasis might unravel therapeutic targets for developing further therapeutic strategies. The generation of a transgenic mouse model expressing B-RafV600E in melanocytes, a mutation that is found in about 60\% of all melanoma, would result in an ideal tool to study melanoma progression and metastasis. In this work, a doxycycline-inducible system was constructed for expression of B-RafV600E and transgenic animals were generated, but the expression system has to be improved, since this strategy didn't give rise to any viable, transgene carrying mice. Furthermore, since it was shown in the work of others that the metastatic behavior of tumour cell lines could be reversed by an embryonic microenvironment and the influence of a tumourigenic microenvironment on melanocytes lead to the acquisition of tumour cell-like characteristics, the question arose, whether B-Raf is as important in melanocyte development as it is in melanoma progression. In this work, the embryonal melanocyte development in B-Raf-deficient and wildtype mouse embryos was examined and there were no differences observed in the localization and number of neural crest stem cells as well as in the localization of the dopachrome-tautomerase positive melanoblasts in the embryos and in cultured neural tube explants. The expression of oncogenic C-Raf in lung epithelial cells has yielded a model for NSCLC giving rise to adenomas lacking spontaneous progression or metastasis. The co-expression of c-Myc in the same cells accelerates the tumour development and gives rise to liver and lymphnode metastases. The expression of c-Myc alone in lung epithelial cells leads to late tumour development with incomplete penetrance. A mutation screen in this work resulted in the observation that a secondary mutation in KRas or LKB1 is necessary for tumour formation in the c-Myc single transgenic animals and suggested metastasis as an early event, since the corresponding metastases of the mutation-prone primary lung tumours were negative for the observed mutations. Furthermore, in this work it was shown that the expression of chicken c-Myc in a non-metastatic NSCLC cell line leads to metastatic clones, showing that c-Myc is sufficient to induce metastasis. Additionally a panel of metastasis markers was identified, that might serve as diagnostic markers in the future.},
  subject      = {Raf <Biochemie>},
  language  = {en}
}
@phdthesis{Cronje2024,
  author    = {Cronj{\´e}, Johrine},
  title     = {Trust towards Virtual Humans in Immersive Virtual Reality and Influencing Factors},
  doi       = {10.25972/OPUS-34814},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-348143},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {Virtual humans (VHs) hold immense potential for collaboration in social virtual reality (VR). As VR technology advances, it's vital to assess the psychological effects on VH trust and user privacy to build meaningful social interactions in VR. In social VR, users must be able to trust the VHs they interact with as they navigate through socio-cultural activities. The evaluation of trustworthiness in VHs profoundly impacts interaction quality and user willingness to engage. Conversely, untrustworthy VHs can harm user experiences, privacy, and VR engagement. To address this, we conducted immersive VR studies, exploring how psychological factors influence user's VH trust evaluation under various psychological conditions. This research is pivotal for developing strategies to enhance user privacy, establish secure VR environments, and create a foundation of trust that supports immersive socio-cultural experiences in VR. To date, there are no established interpersonal trust measurement tools specifically for VHs in VR. In study 1 (the familiarity study) of the current thesis the VR-adjusted version of the social conditioned place preference paradigm (SCPP) by Kiser et al., (2022) was identified as a potential trust measurement tool. We tested whether the familiarity of a VH influenced trust as measured with the SCPP paradigm and other self-defined outcome measures, in a Computer Augmented Virtual Environment (CAVE). The CAVE is a VR system that combines immersive VR with real-world elements. It consists of a room-sized space where the walls are used as projection screens to display virtual scenes and objects. In this within - subject design (n = 20), half of the participants were familiarized with one VH and tasked to explore and interact in a realistic looking virtual art museum environment. The participant's evaluation of the VH's trustworthiness was measured as well as their subsequent trust behaviours. Results revealed no significant differences in the evaluation of the VH's trustworthiness nor any behavioural differences between conditions. The findings of the impact of a VH's familiarity on trust is inconclusive due to the major limitations of the paradigm. We concluded that the SCPP paradigm needs further validation and the proposed proxies of trust need to be re-evaluated. The findings were considered in the following study. The virtual maze paradigm design of Hale, (2018) was identified as a potential trust measurement tool, however several limitations are associated with its use to measure trust in VR. In study 2 (a validation study), improvements were made to the virtual maze paradigm of Hale, (2018) and a variant of this paradigm was implemented. We conducted a validation study with 70 participants in a between-subject design with VH trustworthiness as the between-subject factor. Participants wore a head-mounted display (HMD), to deliver an immersive VR experience. In our version of the virtual maze, it was the task of the users (the trustors) to navigate through a maze in VR, where they could interact with a VH (the trustee). They could choose to ask for advice and follow the advice from the VH if they wanted to. The number of times participants asked and followed advice and the time it took to respond to the given advice served as behavioural proxies/measures of trust. The two conditions (trustworthy vs. untrustworthy) did not differ in the content of the advice but in the appearance, tone of voice and engagement of the trustees (allegedly an avatar controlled by other participants). Results indicated that the experimental manipulation was successful, as participants rated the VH as more trustworthy in the trustworthy condition compared with the VH in the untrustworthy condition. Importantly, this manipulation affected the trust behaviour of participants, who, in the trustworthy condition, asked for advice and followed advice more often, indicating that the paradigm is sensitive to differences in VH's trustworthiness. Thus, our paradigm can be used to measure differences in interpersonal trust towards VHs and may serve as a valuable research tool for researchers who study trust in VR. Therefore, study 2 fills the gap in the literature, for an interpersonal trust measurement tool specifically for VHs in VR. Two experimental studies, with a sample size of 50 participants each, utilized the virtual maze paradigm where participants entered 12 rooms under different conditions. We examined the influence of cognitive load (CL) on trust towards VH in VR in study 3 (Cognitive load study), and the influence of emotional affect (Emotional affect study) on trust towards VH in VR in study 4 (EA study). In both studies, we assessed participant's evaluation of a VH's trustworthiness, along with three behavioural indicators of trust in the maze task: 1) frequency of advice asked, 2) frequency of advice followed, and 3) the time taken by participants to execute the received advice. In study 3, the CL was manipulated with the auditory 1-back task in the high cognitive load condition (HCL). In study 4, the Autobiographical Emotional Memory Task (AEMT) was used to manipulate the EA of participants in the negative emotional affect (NEA) condition. As an additional manipulation, while participants were immersed in VR, they were exposed to 12 negative pictures and sounds that was presented simultaneously to strengthen the initial manipulation. The manipulation of the within-subject factors (CL and EA) was successful in both studies, as significant differences between conditions were observed in both studies (higher CL in the HCL condition and a more negative EA in the NEA condition). However, only CL influenced participant's evaluation of the VH's trustworthiness. The VH were evaluated as significantly more trustworthy after the HCL condition. Despite the difference in trust evaluation, there was no difference in advice asking or following. Participants in study 4 asked and followed advice due to their trust in the VH and asked and followed advice equally often in both conditions. Importantly, significant differences were observed in the participants response times in both studies. In study 3 during the HCL condition participants followed advice quicker. The order in which the conditions were presented influenced the experience of CL. Participants experienced higher levels of CL and responded to advice significantly faster when low cognitive load (LCL) was presented as the first condition compared with LCL as the second condition. In study 4 participants in the NEA condition followed advice slower similar to the findings of study 3. The order in which the conditions were presented had a significant effect on the EA. Participants asked and followed advice less when the NEA condition was presented first compared with when it is presented second. Possible explanations for the findings are discussed in the thesis. Overall, this thesis offers a novel tool for trust measurement (the virtual maze paradigm) and contributes to understanding the role of psychological factors in trust towards virtual humans in virtual reality.},
  subject      = {Virtuelle Realit{\"a}t},
  language  = {en}
}
@phdthesis{HuttererneeHerzog2024,
  author    = {Hutterer, n{\´e}e Herzog, Katharina},
  title     = {Treatment-like use of discrimination training to reduce generalization of conditioned fear},
  doi       = {10.25972/OPUS-31728},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-317286},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {Anxiety patients overgeneralize fear, also because of an inability to perceptually discriminate threat and safety signals. Therefore, some studies have developed discrimination training that successfully reduced the occurrence of fear generalization. The present work is the first to take a treatment-like approach by using discrimination training after generalization has occurred. Therefore, two studies were conducted with healthy participants using the same fear conditioning and generalization paradigm, with two faces as conditioned stimuli (CSs), and four facial morphs between CSs as generalization stimuli (GSs). Only one face (CS+) was followed by a loud scream (unconditioned stimulus, US). In Study 1, participants underwent either fear-relevant (discriminating faces) or fear-irrelevant discrimination training (discriminating width of lines) or a non-discriminative control training between the two generalization tests, each with or without feedback (n = 20 each). Generalization of US expectancy was reduced more effectively by fear-relevant compared to fear-irrelevant discrimination training. However, neither discrimination training was more effective than non-discriminative control training. Moreover, feedback reduced generalization of US expectancy only in discrimination training. Study 2 was designed to replicate the effects of the discrimination-training conditions in a large sample (N = 244) and examine their benefits in individuals at risk for anxiety disorders. Again, feedback reduced fear generalization particularly well for US expectancy. Fear relevance was not confirmed to be particularly fear-reducing in healthy participants, but may enhance training effects in individuals at risk of anxiety disorder. In summary, this work provides evidence that existing fear generalization can be reduced by discrimination training, likely involving several (higher-level) processes besides perceptual discrimination (e.g., motivational mechanisms in feedback conditions). Its use may be promising as part of individualized therapy for patients with difficulty discriminating similar stimuli.},
  subject      = {Furcht},
  language  = {en}
}
@phdthesis{Wu2007,
  author    = {Wu, Rongxue},
  title     = {Treatment with integrin alpha v inhibitor abolishes compensatory cardiac hypertrophy due to altered signal transduction and ECM gene expression},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-21339},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2007},
  abstract  = {Integrine sind Transmembranrezeptoren, welche mechanische Signale von der extrazellul{\"a}ren Matrix (ECM) zum Zytoskelett {\"u}bermitteln ("outside-in-signaling"). Viele molekulare Defekte in der Verbindung zwischen Zytoskelett und ECM erzeugen bekanntermaßen Kardiomyopathien. alpha v Integrin scheint eine Hauptrolle in verschiedenen Prozessen der kardialen Reorganisation zu spielen, wie z.B. Regulation der Zellproliferation, -migration und -differenzierung. Unsere Hypothese war, dass alpha v -Integrin-vermittelte Signale notwendig f{\"u}r die kompensatorische Hypertrophie nach Aortenkonstriktion sind und assoziiert mit der Modulation der Expression von ECM-Proteinen. Dazu wurden M{\"a}use mit einem spezifischen alpha v Integrin-Inhibitor behandelt und einer Aortenkonstriktion (AB) unterzogen. Nach zwei Tagen und nach sieben Tagen wurden die M{\"a}use echokardiographisch untersucht und eingehende h{\"a}modynamische Untersuchungen wurden durchgef{\"u}hrt. Die Behandlung mit dem alpha v -Integrin-Inhibitor f{\"u}hrte zu einer dilatativen Kardiomyopathie und Herzinsuffizienz in den AB-M{\"a}usen, gekennzeichnet durch einen dilatierten linken Ventrikel, schlechte linksventrikul{\"a}re Funktion und einer Lungenstauung, wohingegen die scheinbehandelten Tiere eine kompensatorische Hypertrophie des linken Ventrikels zeigten. Untersuchungen der beteiligten Signalwege zeigten eine Aktivierung des p38 MAP-Kinase-Signalwegs, von ERK 1 und -2, der Focal Adhesion Kinase FAK und Tyrosin-Phosphorylierung von c-Src in den Kontrollherzen, was in den Inhibitor-behandelten Herzen fehlte. mRNA-Expressionsanalysen f{\"u}r 96 Gene mittels "Micro-Arrays" ermittelten verschiedene genomische Ziele des alpha v -Integrin-aktivierten Signalwegs. 18 f{\"u}r ECM-Proteine codierende Gene wurden mehr als 2-fach hochreguliert, z.B. Kollagen (8,11-fach ± 2,2), Fibronectin (2,32 ± 094), SPARC (3,78 ± 0,12), ADAMTS-1 (3,51 ± 0,81) und TIMP2 (2,23 ± 0,98), wohingegen die Aktivierung dieser Gene in Inhibitor-behandelten Tieren aufgehoben war. Wir folgern daraus, dass Signalwege unterhalb von alpha v -Integrin, mediiert durch MAP-Kinasen, FAK und c-Src, zu einer verst{\"a}rkten Expression von ECM-Komponenten f{\"u}hrt, welche f{\"u}r die kompensatorische Antwort auf Druckbelastung n{\"o}tig sind.},
  subject      = {Antigen},
  language  = {en}
}
@phdthesis{Mueller2022,
  author    = {M{\"u}ller, Valentin Leander},
  title     = {Transport signatures of topological and trivial states in the three-dimensional topological insulator HgTe},
  doi       = {10.25972/OPUS-25952},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-259521},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {The thesis at hand is concerned with improving our understanding of and our control over transport properties of the three-dimensional topological insulator HgTe. Topological insulators are characterized by an insulating bulk and symmetry-protected metallic surface states. These topological surface states hold great promise for research and technology; at the same time, many properties of experimentally accessible topological insulator materials still need to be explored thoroughly. The overall aim of this thesis was to experimentally investigate micrometer-sized HgTe transport devices to observe the ballistic transport regime as well as intercarrier scattering and possibly identify special properties of the topological surface states. Part I of the thesis presents lithographic developments concerned with etching small HgTe devices. The aim was to replace existing processes which relied on dry etching with high-energy \(\text{Ar}^+\) ions and an organic etch mask. This etching method is known to degrade the HgTe crystal quality. In addition, the etch mask turned out to be not durable for long etching processes and difficult to remove completely after etching. First, \(\text{BaF}_2\) was introduced as a new etch mask for dry etching to replace the organic etch mask. With common surface characterization techniques like SEM and XPS it was shown that \(\text{BaF}_2\) etch masks are easy to deposit, highly durable in common dry etching processes for \(\text{Hg}_{1-x}\text{Cd}_x\text{Te}\), and easy to remove in deionized water. Transport results of HgTe devices fabricated with the new etch mask are comparable to results obtained with the old process. At the same time, the new etch mask can withstand longer etching times and does not cause problems due to incomplete removal. Second, a new inductively coupled plasma dry etching process based on \(\text{CH}_4\) and Ar was introduced. This etching process is compatible with \(\text{BaF}_2\) etch masks and yields highly reproducible results. Transport results indicate that the new etching process does not degrade the crystal quality and is suitable to produce high-quality transport devices even in the micrometer range. A comparison with wet-etched samples shows that inductively coupled plasma etching introduces a pronounced edge roughness. This - usually undesirable - property is actually beneficial for some of the experiments in this study and mostly irrelevant for others. Therefore, most samples appearing in this thesis were fabricated with the new process. Part II of the thesis details the advancements made in identifying topological and trivial states which contribute to transport in HgTe three-dimensional topological insulators. To this end, macroscopic Hall bar samples were fabricated from high-quality tensilely strained HgTe layers by means of the improved lithographic processes. All samples were equipped with a top gate electrode, and some also with a modulation doping layer or a back gate electrode to modify the carrier density of the surface states on both sides of the HgTe layer. Due to the high sample quality, Landau levels could be well-resolved in standard transport measurements down to magnetic fields of less than 0.5T. High-resolution measurements of the Landau level dispersion with gate voltage and magnetic field allowed disentangling different transport channels. The main result here is that the upper (electron) branches of the two topological surface states contribute to transport in all experimentally relevant density regimes, while the hole branch is not accessible. Far in n-regime bulk conduction band states give a minor contribution to transport. More importantly, trivial bulk valence band holes come into play close to the charge neutrality point. Further in p-regime, the strong applied gate voltage leads to the formation of two-dimensional, massive hole states at the HgTe surface. The interplay of different states gives rise to rich physics: Top gate-back gate maps revealed that an anticrossing of Landau levels from the two topological surface states occurs at equal filling. A possible explanation for this effect is a weak hybridization of the surface states; however, future studies need to further clarify this point. Furthermore, the superposition of n-type topological and p-type trivial surface states leads to an intriguing Landau level dispersion. The good quantization of the Hall conductance in this situation indicates that the counterpropagating edge states interact with each other. The nature of this interaction will be the topic of further research. Part III of the thesis is focused on HgTe microstructures. These "channel samples" have a typical width of 0.5 to 4µm and a typical length of 5 to 80µm. The quality of these devices benefits particularly from the improved lithographic processes. As a result, the impurity mean free path of the topological surface state electrons is on the order of the device width and transport becomes semiballistic. This was verified by measuring the channel resistance in small magnetic fields in n-regime. The deflection of carriers towards the dissipative channel walls results in a pronounced peak in the magnetoresistance, which scales in a predictable manner with the channel width. To investigate transport effects due to mutual scattering of charge carriers, the differential resistance of channel samples was measured as a function of carrier temperature. Selective heating of the charge carriers - but not the lattice - was achieved by passing a heating current through the channel. Increasing the carrier temperature has two pronounced effects when the Fermi level is situated in proximity to the bulk valence band maximum where the density of states is large. First, when both topological surface state electrons and bulk holes are present, electron-hole scattering leads to a pronounced increase in resistance with increasing carrier temperature. Second, a thermally induced increase of the electron and hole carrier densities reduces the resistance again at higher temperatures. A model considering these two effects was developed, which can well reproduce the experimental results. Current heating experiments in zero-gap HgTe quantum wells and compressively strained HgTe layers are consistent with this model. These observations raise the question as to how electron-hole scattering may affect other transport properties of HgTe-based three-dimensional topological insulators, which is briefly discussed in the outlook.},
  subject      = {Topologischer Isolator},
  language  = {en}
}
@phdthesis{Schmitt2022,
  author    = {Schmitt, Fabian Bernhard},
  title     = {Transport properties of the three-dimensional topological insulator mercury telluride},
  doi       = {10.25972/OPUS-29173},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-291731},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {The subject of this thesis is the investigation of the transport properties of topological and massive surface states in the three-dimensional topological insulator Hg(Mn)Te. These surface states give rise to a variety of extraordinary transport phenomena, making this material system of great interest for research and technological applications. In this connection, many physical properties of the topological insulator Hg(Mn)Te still require in-depth exploration. The overall aim of this thesis is to analyze the quantum transport of HgTe-based devices ranging from hundreds of micrometers (macroscopic) down to a few micrometers in size (microscopic) in order to extend the overall understanding of surface states and the possibilities of their manipulation. In order to exploit the full potential of our high-quality heterostructures, it was necessary to revise and improve the existing lithographic fabrication process of macroscopic three-dimensional Hg(Mn)Te samples. A novel lithographic standard recipe for the fabrication of the HgTe-based macrostructures was developed. This recipe includes the use of an optimized Hall bar design and wet etching instead of etching with high-energy \(\mathrm{{Ar^{+}}}\)-ions, which can damage the samples. Further, a hafnium oxide insulator is applied replacing the SiO\(_{2}\)/Si\(_{3}\)N\(_{4}\) dielectric in order to reduce thermal load. Moreover, the devices are metallized under an alternating angle to avoid discontinuities of the metal layers over the mesa edges. It was revealed that the application of gate-dielectric and top-gate metals results in n-type doping of the devices. This phenomenon could be attributed to quasi-free electrons tunneling from the trap states, which form at the interface cap layer/insulator, through the cap into the active layer. This finding led to the development of a new procedure to characterize wafer materials. It was found that the optimized lithographic processing steps do not unintentionally react chemically with our heterostructures, thus avoiding a degradation of the quality of the Hg(Mn)Te layer. The implementation of new contact structures Ti/Au, In/Ti/Au, and Al/Ti/Au did not result in any improvement compared to the standard structure AuGe/Au. However, a novel sample recipe could be developed, resulting in an intermixing of the contact metals (AuGe and Au) and fingering of metal into the mesa. The extent of the quality of the ohmic contacts obtained through this process has yet to be fully established. This thesis further deals with the lithographic realization of three-dimensional HgTe-based microstructures measuring only a few micrometer in size. Thus, these structures are in the order of the mean free path and the spin relaxation length of topological surface state electrons. A lithographic process was developed enabling the fabrication of nearly any desired microscopic device structure. In this context, two techniques suitable for etching microscopic samples were realized, namely wet etching and the newly established inductively coupled plasma etching. While wet etching was found to preserve the crystal quality of the active layer best, inductively coupled plasma etching is characterized by high reproducibility and excellent structural fidelity. Hence, the etching technique employed depends on the envisaged type of experiment. Magneto-transport measurements were carried out on the macroscopic HgTe-based devices fabricated by means of improved lithographic processing with respect to the transport properties of topological and massive surface states. It was revealed that due to the low charge carrier density present in the leads to the ohmic contacts, these regions can exhibit an insulating behavior at high magnetic fields and extremely low temperatures. As soon as the filling factor of the lowest Landau levels dropped below a critical value (\(\nu_{\mathrm{{c}}}\approx0.8\)), the conductance of the leads decreased significantly. It was demonstrated that the carrier density in the leads can be increased by the growth of modulation doping layers, a back-gate-electrode, light-emitting diode illumination, and by the application of an overlapping top-gate layout. This overlapping top-gate and a back-gate made it possible to manipulate the carrier density of the surface states on both sides of the Hg(Mn)Te layer independently. With this setup, it was identified that topological and massive surface states contribute to transport simultaneously in 3D Hg(Mn)Te. A model could be developed allowing the charge carrier systems populated in the sample to be determined unambiguously. Based on this model, the process of the re-entrant quantum Hall effect observed for the first time in three-dimensional topological insulators could be explained by an interplay of n-type topological and p-type massive surface states. A well-pronounced \(\nu=-1\rightarrow\nu=-2\rightarrow\nu=-1\) sequence of quantum Hall plateaus was found in manganese-doped HgTe-based samples. It is postulated that this is the condensed-matter realization of the parity anomaly in three-dimensional topological insulators. The actual nature of this phenomenon can be the subject of further research. In addition, the measurements have shown that inter-scattering occurs between counter-propagating quantum Hall edge states. The good quantization of the Hall conductance despite this inter-scattering indicates that only the unpaired edge states determine the transport properties of the system as a whole. The underlying inter-scattering mechanism is the topic of a publication in preparation. Furthermore, three-dimensional HgTe-based microstructures shaped like the capital letter "H" were investigated regarding spin transport phenomena. The non-local voltage signals occurring in the measurements could be attributed to a current-induced spin polarization of the topological surface states due to electrons obeying spin-momentum locking. It was shown that the strength of this non-local signal is directly connected to the magnitude of the spin polarization and can be manipulated by the applied top-gate voltage. It was found that in these microstructures, the massive surface and bulk states, unlike the topological surface states, cannot contribute to this spin-associated phenomenon. On the contrary, it was demonstrated that the population of massive states results in a reduction of the spin polarization, either due to the possible inter-scattering of massive and topological surface states or due to the addition of an unpolarized electron background. The evidence of spin transport controllable by a top-gate-electrode makes the three-dimensional material system mercury telluride a promising candidate for further research in the field of spintronics.},
  subject      = {Topologischer Isolator},
  language  = {en}
}
@phdthesis{Geissler2017,
  author    = {Geißler, Florian},
  title     = {Transport properties of helical Luttinger liquids},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-153450},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {The prediction and the experimental discovery of topological insulators has set the stage for a novel type of electronic devices. In contrast to conventional metals or semiconductors, this new class of materials exhibits peculiar transport properties at the sample surface, as conduction channels emerge at the topological boundaries of the system. In specific materials with strong spin-orbit coupling, a particular form of a two-dimensional topological insulator, the quantum spin Hall state, can be observed. Here, the respective one-dimensional edge channels are helical in nature, meaning that there is a locking of the spin orientation of an electron and its direction of motion. Due to the symmetry of time-reversal, elastic backscattering off interspersed impurities is suppressed in such a helical system, and transport is approximately ballistic. This allows in principle for the realization of novel energy-efficient devices, ``spintronic`` applications, or the formation of exotic bound states with non-Abelian statistics, which could be used for quantum computing. The present work is concerned with the general transport properties of one-dimensional helical states. Beyond the topological protection mentioned above, inelastic backscattering can arise from various microscopic sources, of which the most prominent ones will be discussed in this Thesis. As it is characteristic for one-dimensional systems, the role of electron-electron interactions can be of major importance in this context. First, we review well-established techniques of many-body physics in one dimension such as perturbative renormalization group analysis, (Abelian) bosonization, and Luttinger liquid theory. The latter allow us to treat electron interactions in an exact way. Those methods then are employed to derive the corrections to the conductance in a helical transport channel, that arise from various types of perturbations. Particularly, we focus on the interplay of Rashba spin-orbit coupling and electron interactions as a source of inelastic single-particle and two-particle backscattering. It is demonstrated, that microscopic details of the system, such as the existence of a momentum cutoff, that restricts the energy spectrum, or the presence of non-interacting leads attached to the system, can fundamentally alter the transport signature. By comparison of the predicted corrections to the conductance to a transport experiment, one can gain insight about the microscopic processes and the structure of a quantum spin Hall sample. Another important mechanism we analyze is backscattering induced by magnetic moments. Those findings provide an alternative interpretation of recent transport measurements in InAs/GaSb quantum wells.},
  subject      = {Topologischer Isolator},
  language  = {en}
}
@phdthesis{Breunig2021,
  author    = {Breunig, Daniel Manfred},
  title     = {Transport properties and proximity effect of topological hybrid structures},
  doi       = {10.25972/OPUS-25054},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-250546},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {Over the last two decades, accompanied by their prediction and ensuing realization, topological non-trivial materials like topological insulators, Dirac semimetals, and Weyl semimetals have been in the focus of mesoscopic condensed matter research. While hosting a plethora of intriguing physical phenomena all on their own, even more fascinating features emerge when superconducting order is included. Their intrinsically pronounced spin-orbit coupling leads to peculiar, time-reversal symmetry protected surface states, unconventional superconductivity, and even to the emergence of exotic bound states in appropriate setups. This Thesis explores various junctions built from - or incorporating - topological materials in contact with superconducting order, placing particular emphasis on the transport properties and the proximity effect. We begin with the analysis of Josephson junctions where planar samples of mercury telluride are sandwiched between conventional superconducting contacts. The surprising observation of pronounced excess currents in experiments, which can be well described by the Blonder-Tinkham-Klapwijk theory, has long been an ambiguous issue in this field, since the necessary presumptions are seemingly not met. We propose a resolution to this predicament by demonstrating that the interface properties in hybrid nanostructures of distinctly different materials yet corroborate these assumptions and explain the outcome. An experimental realization is feasible by gating the contacts. We then proceed with NSN junctions based on time-reversal symmetry broken Weyl semimetals and including superconducting order. Due to the anisotropy of the electron band structure, both the transport properties as well as the proximity effect depend substantially on the orientation of the interfaces between the materials. Moreover, an imbalance can be induced in the electron population between Weyl nodes of opposite chirality, resulting in a non-vanishing spin polarization of the Cooper pairs leaking into the normal contacts. We show that such a system features a tunable dipole character with possible applications in spintronics. Finally, we consider partially superconducting surface states of three-dimensional topological insulators. Tuning such a system into the so-called bipolar setup, this results in the formation of equal-spin Cooper pairs inside the superconductor, while simultaneously acting as a filter for non-local singlet pairing. The creation and manipulation of these spin-polarized Cooper pairs can be achieved by mere electronic switching processes and in the absence of any magnetic order, rendering such a nanostructure an interesting system for superconducting spintronics. The inherent spin-orbit coupling of the surface state is crucial for this observation, as is the bipolar setup which strongly promotes non-local Andreev processes.},
  subject      = {Supraleitung},
  language  = {en}
}
@phdthesis{Grauer2018,
  author    = {Grauer, Stefan},
  title     = {Transport Phenomena in Bi\(_2\)Se\(_3\) and Related Compounds},
  publisher = {Verlag Dr. Hut GmbH},
  isbn      = {978-3-8439-3481-7},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-157666},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2018},
  abstract  = {One of the most significant technological advances in history was driven by the utilization of a new material class: semiconductors. Its most important application being the transistor, which is indispensable in our everyday life. The technological advance in the semiconductor industry, however, is about to slow down. Making transistors ever smaller to increase the performance and trying to reduce and deal with the dissipative heat will soon reach the limits dictated by quantum mechanics with Moore himself, predicting the death of his famous law in the next decade. A possible successor for semiconductor transistors is the recently discovered material class of topological insulators. A material which in its bulk is insulating but has topological protected metallic surface states or edge states at its boundary. Their electrical transport characteristics include forbidden backscattering and spin-momentum-locking with the spin of the electron being perpendicular to its momentum. Topological insulators therefore offer an opportunity for high performance devices with low dissipation, and applications in spintronic where data is stored and processed at the same point. The topological insulator Bi\(_2\)Se\(_3\) and related compounds offer relatively high energy band gaps and a rather simple band structure with a single dirac cone at the gamma point of the Brillouin zone. These characteritics make them ideal candidates to study the topological surface state in electrical transport experiments and explore its physics.},
  subject      = {Topologischer Isolator},
  language  = {en}
}
@phdthesis{Kibe2024,
  author    = {Kibe, Anuja},
  title     = {Translational landscape and regulation of recoding in virus-infected cells},
  doi       = {10.25972/OPUS-31099},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-310993},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2024},
  abstract  = {RNA viruses rely entirely on the host machinery for their protein synthesis and harbor non-canonical translation mechanisms, such as alternative initiation and programmed -1 ribosomal frameshifting (-1PRF), to suit their specific needs. On the other hand, host cells have developed a variety of defensive strategies to safeguard their translational apparatus and at times transiently shut down global translation. An infection can lead to substantial translational remodeling in cells and translational control is critical during antiviral response. Due to their sheer diversity, this control is likely unique to each RNA virus and the intricacies of post-transcriptional regulation are unclear in certain viral species. Here, we explored different aspects of translational regulation in virus-infected cells in detail. Using ribosome profiling, we extensively characterized the translational landscape in HIV-1 infected T cells, uncovering novel features of gene regulation in both host and virus. Additionally, we show that substantial pausing occurs prior to the frameshift site indicating complex regulatory mechanisms involving upstream viral RNA elements that can act as cis- regulators of frameshifting. We also characterized the mechanistic details of trans- modulation of frameshifting by host- and virus-encoded proteins. Host antiviral protein ZAP-S binds to the SARS-CoV-2 frameshift site and destabilizes the stimulatory structure, leading to frameshift inhibition. On the other hand, EMCV 2A protein stabilizes the viral frameshift site, thereby, activating EMCV frameshifting. While both proteins were shown to be antagonistic in their mechanism, they interact with the host translational machinery. Furthermore, we showed that frameshifting can be regulated not just by proteins, but also by small molecules. High-throughput screening of natural and synthetic compounds identified two potent frameshift inhibitors that also impeded viral replication, namely trichangion and compound 25. Together, this work largely enhances our understanding of gene regulation mechanisms in virus-infected cells and further validates the druggability of viral -1 PRF site.},
  subject      = {Zelle},
  language  = {en}
}