@book{Halder2022,
  author    = {Halder, Partho},
  title     = {Identification and characterization of synaptic proteins of Drosophila melanogaster using monoclonal antibodies of the Wuerzburg Hybridoma Library},
  doi       = {10.25972/OPUS-27020},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-270205},
  publisher      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {For a large fraction of the proteins expressed in the human brain only the primary structure is known from the genome project. Proteins conserved in evolution can be studied in genetic models such as Drosophila. In this doctoral thesis monoclonal antibodies (mAbs) from the Wuerzburg Hybridoma library are produced and characterized with the aim to identify the target antigen. The mAb ab52 was found to be an IgM which recognized a cytosolic protein of Mr ~110 kDa on Western blots. The antigen was resolved by two-dimensional gel electrophoresis (2DE) as a single distinct spot. Mass spectrometric analysis of this spot revealed EPS-15 (epidermal growth factor receptor pathway substrate clone 15) to be a strong candidate. Another mAb from the library, aa2, was already found to recognize EPS-15, and comparison of the signal of both mAbs on Western blots of 1D and 2D electrophoretic separations revealed similar patterns, hence indicating that both antigens could represent the same protein. Finally absence of the wild-type signal in homozygous Eps15 mutants in a Western blot with ab52 confirmed the ab52 antigen to be EPS-15. Thus both the mAbs aa2 and ab52 recognize the Drosophila homologue of EPS-15. The mAb aa2, being an IgG, is more suitable for applications like immunoprecipitation (IP). It has already been submitted to the Developmental Studies Hybridoma Bank (DSHB) to be easily available for the entire research community. The mAb na21 was also found to be an IgM. It recognizes a membrane associated antigen of Mr ~10 kDa on Western blots. Due to the membrane associated nature of the protein, it was not possible to resolve it by 2DE and due to the IgM nature of the mAb it was not possible to enrich the antigen by IP. Preliminary attempts to biochemically purify the endogenously expressed protein from the tissue, gave 99 promising results but could not be completed due to lack of time. Thus biochemical purification of the protein seems possible in order to facilitate its identification by mass spectrometry. Several other mAbs were studied for their staining pattern on cryosections and whole mounts of Drosophila brains. However, many of these mAbs stained very few structures in the brain, which indicated that only a very limited amount of protein would be available as starting material. Because these antibodies did not produce signals on Western blots, which made it impossible to enrich the antigens by electrophoretic methods, we did not attempt their purification. However, the specific localization of these proteins makes them highly interesting and calls for their further characterization, as they may play a highly specialized role in the development and/or function of the neural circuits they are present in. The purification and identification of such low expression proteins would need novel methods of enrichment of the stained structures.},
  subject      = {Taufliege},
  language  = {en}
}
@phdthesis{Mrestani2022,
  author    = {Mrestani, Achmed},
  title     = {Strukturelle Differenzierung und Plastizit{\"a}t pr{\"a}synaptischer Aktiver Zonen},
  doi       = {10.25972/OPUS-23578},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-235787},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Ziel der vorliegenden Arbeit war die nanoskopische Analyse struktureller Differenzierung und Plastizit{\"a}t pr{\"a}synaptischer aktiver Zonen (AZs) an der NMJ von Drosophila melanogaster mittels hochaufl{\"o}sender, lichtmikroskopischer Bildgebung von Bruchpilot (Brp). In erster Linie wurde das lokalisationsmikroskopische Verfahren dSTORM angewendet. Es wurden neue Analyse-Algorithmen auf der Basis von HDBSCAN entwickelt, um eine objektive, in weiten Teilen automatisierte Quantifizierung bis auf Ebene der Substruktur der AZ zu erm{\"o}glichen. Die Differenzierung wurde am Beispiel phasischer und tonischer Synapsen, die an dieser NMJ durch Is- und Ib-Neurone gebildet werden, untersucht. Phasische Is-Synapsen mit hoher Freisetzungswahrscheinlichkeit zeigten kleinere, kompaktere AZs mit weniger Molek{\"u}len und h{\"o}herer molekularer Dichte mit ebenfalls kleineren, kompakteren Brp-Subclustern. Akute strukturelle Plastizit{\"a}t wurde am Beispiel pr{\"a}synaptischer Hom{\"o}ostase, bei der es zu einer kompensatorisch erh{\"o}hten Neurotransmitterfreisetzung kommt, analysiert. Interessanterweise zeigte sich hier ebenfalls eine kompaktere Konfiguration der AZ, die sich auch auf Ebene der Subcluster widerspiegelte, ohne Rekrutierung von Molek{\"u}len. Es konnte demonstriert werden, dass sich eine h{\"o}here Molek{\"u}ldichte in der Lokalisationsmikroskopie in eine h{\"o}here Intensit{\"a}t und gr{\"o}ßere Fl{\"a}che in der konfokalen Mikroskopie {\"u}bersetzt, und damit der Zusammenhang zu scheinbar gegens{\"a}tzlichen Vorbefunden hergestellt werden. Die Verdichtung bzw. Kompaktierung erscheint im Zusammenhang mit der Kopplungsdistanz zwischen VGCCs und pr{\"a}synaptischen Vesikeln als plausibles Muster der effizienten Anordnung molekularer Komponenten der AZ. Die hier eingef{\"u}hrten Analysewerkzeuge und molekularbiologischen Strategien, basierend auf dem CRISPR/Cas9-System, zur Markierung von AZ-Komponenten k{\"o}nnen zuk{\"u}nftig zur weiteren Kl{\"a}rung der Bedeutung der molekularen Verdichtung als allgemeines Konzept der AZ-Differenzierung beitragen.},
  subject      = {Synapse},
  language  = {de}
}
@phdthesis{Markert2021,
  author    = {Markert, Sebastian Matthias},
  title     = {Enriching the understanding of synaptic architecture from single synapses to networks with advanced imaging techniques},
  doi       = {10.25972/OPUS-18993},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-189935},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2021},
  abstract  = {Because of its complexity and intricacy, studying the nervous system is often challenging. Fortunately, the small nematode roundworm Caenorhabditis elegans is well established as a model system for basic neurobiological research. The C. elegans model is also the only organism with a supposedly complete connectome, an organism-wide map of synaptic connectivity resolved by electron microscopy, which provides some understanding of how the nervous system works as a whole. However, the number of available data-sets is small and the connectome contains errors and gaps. One example of this concerns electrical synapses. Electrical synapses are formed by gap junctions and difficult to map due to their often ambiguous morphology in electron micrographs, leading to misclassification or omission. On the other hand, chemical synapses are more easily mapped, but many aspects of their mode of operation remain elusive and their role in the C. elegans connectome is oversimplified. A comprehensive understanding of signal transduction of neurons between each other and other cells will be indispensable for a comprehensive understanding of the nervous system. In this thesis, I approach these challenges with a combination of advanced light and electron microscopy techniques. First, this thesis describes a strategy to increase synaptic specificity in connectomics. Specifically, I classify gap junctions with a high degree of confidence. To achieve this, I utilized array tomography (AT). In this thesis, AT is adapted for high-pressure freezing to optimize for structure preservation and for super-resolution light microscopy; in this manner, I aim to bridge the gap between light and electron microscopy resolutions. I call this adaptation super-resolution array tomography (srAT). The srAT approach made it possible to clearly identify and map gap junctions with high precision and accuracy. The results from this study showcased the feasibility of incorporating electrical synapses into connectomes in a systematic manner, and subsequent studies have used srAT for other models and questions. As mentioned above, the C. elegans connectomic model suffers from a shortage of datasets. For most larval stages, including the special dauer larval stage, connectome data is completely missing up to now. To obtain the first partial connectome data-set of the C. elegans dauer larva, we used focused ion-beam scanning electron microscopy (FIB-SEM). This technique offers an excellent axial resolution and is useful for acquiring large volumes for connectomics. Together with our collaborators, I acquired several data-sets which enable the analysis of dauer stage-specific "re-wiring" of the nervous system and thus offer valuable insights into connectome plasticity/variability. While chemical synapses are easy to map relative to electrical synapses, signal transduction via chemical transmitters requires a large number of different proteins and molecular processes acting in conjunction in a highly constricted space. Because of the small spatial scale of the synapse, investigating protein function requires very high resolution, which electron tomography provides. I analyzed electron tomograms of a worm-line with a mutant synaptic protein, the serine/threonine kinase SAD-1, and found remarkable alterations in several architectural features. My results confirm and re-contextualize previous findings and provide new insight into the functions of this protein at the chemical synapse. Finally, I investigated the effectiveness of our methods on "malfunctioning," synapses, using an amyotrophic lateral sclerosis (ALS) model. In the putative synaptopathy ALS, the mechanisms of motor neuron death are mostly unknown. However, mutations in the gene FUS (Fused in Sarcoma) are one known cause of the disease. The expression of the mutated human FUS in C. elegans was recently shown to produce an ALS-like phenotype in the worms, rendering C. elegans an attractive disease model for ALS. Together with our collaboration partners, I applied both srAT and electron tomography methods to "ALS worms" and found effects on vesicle docking. These findings help to explain electrophysiological recordings that revealed a decrease in frequency of mini excitatory synaptic currents, but not amplitudes, in ALS worms compared to controls. In addition, synaptic endosomes appeared larger and contained electron-dense filaments in our tomograms. These results substantiate the idea that mutated FUS impairs vesicle docking and also offer new insights into further molecular mechanisms of disease development in FUS-dependent ALS. Furthermore, we demonstrated the broader applicability of our methods by successfully using them on cultured mouse motor neurons. Overall, using the C. elegans model and a combination of light and electron microscopy methods, this thesis helps to elucidate the structure and function of neuronal synapses, towards the aim of obtaining a comprehensive model of the nervous system.},
  subject      = {Caenorhabditis elegans},
  language  = {en}
}
@phdthesis{Weis2018,
  author    = {Weis, Jessica},
  title     = {Innervation von Schweißdr{\"u}sen bei Patienten mit Morbus Parkinson},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-161505},
  school      = {Universit{\"a}t W{\"u}rzburg},
  pages     = {97},
  year      = {2018},
  abstract  = {Die Forschung auf dem Gebiet der Parkinson-Erkrankung erlebt einen großen Wandel. Eindeutig ist mittlerweile, dass es zu kurz gefasst w{\"a}re diese Erkrankung auf die motorischen Symptome zu beschr{\"a}nken. In den letzten Jahren wurde durch intensive Forschung bewiesen, dass der idiopathische M. Parkinson eine multisystemische Erkrankung ist, welche verschiedene Teile des Nervensystems betreffen kann. Um die zugrundeliegende Pathophysiologie und die Beteiligung des autonomen Nervensystems bei M. Parkinson n{\"a}her zu untersuchen, wurden f{\"u}r diese Studie 30 Patienten mit idiopathischem M. Parkinson, 19 Patienten mit atypischem Parkinsonsyndrom und 30 gesunde Probanden am Universit{\"a}tsklinikum W{\"u}rzburg und an der Paracelsus-Elena-Klinik Kassel rekrutiert. Um Beeintr{\"a}chtigungen von groß-und kleinkalibrigen Nervenfasern einsch{\"a}tzen zu k{\"o}nnen, wurden eine Neurografie des N. suralis sowie eine quantitativ sensorische Testung durchgef{\"u}hrt. Zur Bewertung einer m{\"o}glichen toxischen Komponente von Levodopa gegen{\"u}ber einer direkten Sch{\"a}digung peripherer Nerven durch p-α-Synuclein wurden am Vitamin B12 Stoffwechsel beteiligte Proteine im Blut bestimmt. Alle Patienten und Probanden erhielten Hautbiopsien an Unterschenkel, Oberschenkel, R{\"u}cken und Finger, um anschließend eine immunhistochemische Aufarbeitung der Pr{\"a}parate durchf{\"u}hren zu k{\"o}nnen. Einerseits wurde die Beteiligung somatosensibler Nervenfasern mithilfe der Ausz{\"a}hlung intraepidermaler Nervenfasern (PGP 9.5) bewertet. Andererseits wurden die Schweißdr{\"u}sen auf Pathologien der sympathischen Nervenfasern (VIP, TH, SP, CGRP) und der sudomotorischen Synapsen (SNCA, Synaptophysin, SNAP 25) untersucht. Weiterhin wurde versucht p-α-Synuclein, als Biomarker der Parkinson-Erkrankung, in der Haut nachzuweisen. Positive Ergebnisse konnten hinsichtlich pathologischer Prozesse an den Synapsen erzielt werden. Es zeigte sich sowohl eine Reduktion von nativem α-Synuclein (Unterschenkel, p=0,009 und R{\"u}cken, p=0,013), Synaptophysin (Unterschenkel, p=0,007) als auch SNAP 25 (Unterschenkel, p=0,023) an den untersuchten Schweißdr{\"u}sen der Patientengruppe. Bei der Untersuchung von SNAP 25 zeigte sich des Weiteren eine negative Korrelation zwischen der SNAP 25 Dichte im Unterschenkel und p-α-Synuclein (p=0,007). Bei der Suche nach p-α-Synuclein wurden beinahe 72\% der Parkinson-Patienten positiv getestet, wohingegen keiner der gesunden Probanden p-α-Synuclein in der Haut zeigte. Weiterhin konnte bei 75\% der positiv getesteten Patienten mit Multisystematrophie p-α-Synuclein an somatosensiblen Nervenfasern des subepidermalen Plexus nachgewiesen werden, wohingegen es bei den M. Parkinson Patienten nur 13\% waren. Die Ergebnisse der zugrundeliegenden Arbeit zeigen, dass die Hautbiopsie als fr{\"u}hdiagnostisches Mittel und in der Differentialdiagnose ein hohes Potenzial hat. Die Erforschung von Pathologien an Synapsen wird in der Zukunft an großer Bedeutung gewinnen und scheint ein wichtiger Ansatz, um die Pathophysiologie des M. Parkinson genauer zu verstehen. Die Hautbiopsie k{\"o}nnte dabei von Vorteil sein, da sich Pathologien in vivo untersuchen lassen und man nicht auf Ergebnisse von Autopsien angewiesen ist.},
  subject      = {Parkinson-Krankheit},
  language  = {de}
}
@phdthesis{Scholz2017,
  author    = {Scholz, Nicole},
  title     = {Genetic analyses of sensory and motoneuron physiology in Drosophila melanogaster},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-123249},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {During my PhD I studied two principal biological aspects employing Drosophila melanogaster. Therefore, this study is divided into Part I and II. Part I: Bruchpilot and Complexin interact to regulate synaptic vesicle tethering to the active zone cytomatrix At the presynaptic active zone (AZ) synaptic vesicles (SVs) are often physically linked to an electron-dense cytomatrix - a process referred to as "SV tethering". This process serves to concentrate SVs in close proximity to their release sites before contacting the SNARE complex for subsequent fusion (Hallermann and Silver, 2013). In Drosophila, the AZ protein Bruchpilot (BRP) is part of the proteinous cytomatrix at which SVs accumulate (Kittel et al., 2006b; Wagh et al., 2006; Fouquet et al., 2009). Intriguingly, truncation of only 1\% of the C-terminal region of BRP results in a severe defect in SV tethering to this AZ scaffold (hence named brpnude; Hallermann et al., 2010b). Consistent with these findings, cell-specific overexpression of a C-terminal BRP fragment, named mBRPC-tip (corresponds to 1\% absent in brpnude; m = mobile) phenocopied the brpnude mutant in behavioral and functional experiments. These data indicate that mBRPC-tip suffices to saturate putative SV binding sites, which induced a functional tethering deficit at motoneuronal AZs. However, the molecular identity of the BRP complement to tether SVs to the presynaptic AZ scaffold remains unknown. Moreover, within larval motoneurons membrane-attached C-terminal portions of BRP were sufficient to tether SVs to sites outside of the AZ. Based on this finding a genetic screen was designed to identify BRP interactors in vivo. This screen identified Complexin (CPX), which is known to inhibit spontaneous SV fusion and to enhance stimulus evoked SV release (Huntwork and Littleton, 2007; Cho et al., 2010; Martin et al., 2011). However, so far CPX has not been associated with a function upstream of priming/docking and release of SVs. This work provides morphological and functional evidence, which suggests that CPX promotes recruitment of SVs to the AZ and thereby curtails synaptic short-term depression. Together, the presented findings indicate a functional interaction between BRP and CPX at Drosophila AZs. Part II: The Adhesion-GPCR Latrophilin/CIRL shapes mechanosensation The calcium independent receptor of α-latrotoxin (CIRL), also named Latrophilin, represents a prototypic Adhesion class G-protein coupled-receptor (aGPCR). Initially, Latrophilin was identified based on its capacity to bind the α-component of latrotoxin (α-LTX; Davletov et al., 1996; Krasnoperov et al., 1996), which triggers massive exocytotic activity from neurons of the peripheral nervous system (Scheer et al., 1984; Umbach et al., 1998; Orlova et al., 2000). As a result Latrophilin is considered to play a role in synaptic transmission. Later on, Latrophilins have been associated with other biological processes including tissue polarity (Langenhan et al., 2009), fertility (Pr{\"o}mel et al., 2012) and synaptogenesis (Silva et al., 2011). However, thus far its subcellular localization and the identity of endogenous ligands, two aspects crucial for the comprehension of Latrophilin's in vivo function, remain enigmatic. Drosophila contains only one latrophilin homolog, named dCirl, whose function has not been investigated thus far. This study demonstrates abundant dCirl expression throughout the nervous system of Drosophila larvae. dCirlKO animals are viable and display no defects in development and neuronal differentiation. However, dCirl appears to influence the dimension of the postsynaptic sub-synaptic reticulum (SSR), which was accompanied by an increase in the postsynaptic Discs-large abundance (DLG). In contrast, morphological and functional properties of presynaptic motoneurons were not compromised by the removal of dCirl. Instead, dCirl is required for the perception of mechanical challenges (acoustic-, tactile- and proprioceptive stimuli) through specialized mechanosensory devices, chordotonal organs (Eberl, 1999). The data indicate that dCirl modulates the sensitivity of chordotonal neurons towards mechanical stimulation and thereby adjusts their input-output relation. Genetic interaction analyses suggest that adaption of the molecular mechanotransduction machinery by dCirl may underlie this process. Together, these results uncover an unexpected function of Latrophilin/dCIRL in mechanosensation and imply general modulatory roles of aGPCR in mechanoception.},
  subject      = {Drosophila},
  language  = {en}
}
@phdthesis{Langlhofer2016,
  author    = {Langlhofer, Georg},
  title     = {{\"U}ber die Bedeutung intrazellul{\"a}rer Subdom{\"a}nen des Glycinrezeptors f{\"u}r die Kanalfunktion},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-140249},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2016},
  abstract  = {Der zur Familie der pentameren ligandengesteuerten Ionenkan{\"a}le zugeh{\"o}rige Glycinrezeptor (GlyR) ist ein wichtiger Vermittler synaptischer Inhibition im Zentralnervensystem von S{\"a}ugetieren. GlyR-Mutationen f{\"u}hren zur neurologischen Bewegungsst{\"o}rung Hyperekplexie. Aufgrund fehlender struktureller Daten ist die intrazellul{\"a}re Loop-Struktur zwischen den Transmembransegmenten 3 und 4 (TM3-4 Loop) eine weitgehend unerforschte Dom{\"a}ne des GlyR. Innerhalb dieser Dom{\"a}ne wurden Rezeptortrunkierungen sowie Punktmutationen identifiziert. Rezeptortrunkierung geht mit Funktionslosigkeit einher, welche jedoch durch Koexpression des fehlenden Sequenzabschnitts zum Teil wiederhergestellt werden kann. Innerhalb dieser Arbeit wurde die Interaktion zwischen trunkierten, funktionslosen GlyR und sukzessiv verk{\"u}rzten Komplementationskonstrukten untersucht. Dabei wurden als Minimaldom{\"a}nen f{\"u}r die Interaktion das C-terminalen basische Motive des TM3-4 Loops, die TM4 sowie der extrazellul{\"a}re C-Terminus identifiziert. Die R{\"u}ckkreuzung transgener M{\"a}use, die das Komplementationskonstrukt iD-TM4 unter Kontrolle des GlyR-Promotors exprimierten, mit der oscillator-Maus spdot, die einen trunkierten GlyR exprimiert und 3 Wochen nach der Geburt verstirbt, hatte aufgrund fehlender Proteinexpression keinen Effekt auf die Letalit{\"a}t der Mutation. Des Weiteren wurde die Bedeutsamkeit der Integrit{\"a}t beider basischer Motive 316RFRRKRR322 und 385KKIDKISR392 im TM3-4 Loop in Kombination mit der Loop-L{\"a}nge f{\"u}r die Funktionalit{\"a}t und das Desensitisierungsverhalten des humanen GlyRα1 anhand von chim{\"a}ren Rezeptoren identifiziert. Eine bisher unbekannte Patientenmutation P366L innerhalb des TM3-4 Loops wurde mit molekularbiologischen, biochemischen und elektrophysiologischen Methoden charakterisiert. Es wurde gezeigt, dass die mutierten Rezeptorkomplexe in vitro deutlich reduzierte Glycin-induzierte Maximalstr{\"o}me sowie eine beschleunigte Schließkinetik aufweisen. P366L hat im Gegensatz zu bereits charakterisierten Hyperekplexiemutationen innerhalb des TM3-4 Loops keinen Einfluss auf die Biogenese des Rezeptors. P366 ist Teil einer m{\"o}glichen Poly-Prolin-Helix, die eine Erkennungssequenz f{\"u}r SH3-Dom{\"a}nen darstellt. Ein potenzieller Interaktionspartner des TM3-4 Loops des GlyRα1 ist Collybistin, welches eine wichtige Rolle bei der synaptischen Rezeptorintegration spielt und die Verbindung zum Zytoskelett vermittelt. An der inhibitorischen Synapse verursacht P366L durch die Reduzierung postsynaptischer Chloridstr{\"o}me, das beschleunigte Desensitisierungsverhalten des GlyRα1 sowie ein ver{\"a}ndertes Interaktionsmotiv St{\"o}rungen der glycinergen Transmission, die zur Auspr{\"a}gung ph{\"a}notypischer Symptome der Hyperekplexie f{\"u}hren.},
  subject      = {Glycinrezeptor},
  language  = {de}
}
@phdthesis{Schmitt2017,
  author    = {Schmitt, Dominique},
  title     = {Initial characterization of mouse Syap1 in the nervous system: Search for interaction partners, effects of gene knockdown and knockout, and tissue distribution with focus on the adult brain},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-147319},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {The synapse-associated protein of 47 kDa (Sap47) in Drosophila melanogaster is the founding member of a phylogenetically conserved protein family of hitherto unknown molecular function. Sap47 is localized throughout the entire neuropil of adult and larval brains and closely associated with glutamatergic presynaptic vesicles of larval motoneurons. Flies lacking the protein are viable and fertile and do not exhibit gross structural or marked behavioral deficiencies indicating that Sap47 is dispensable for basic synaptic function, or that its function is compensated by other related proteins. Syap1 - the mammalian homologue of Sap47 - was reported to play an essential role in Akt1 phosphorylation in various non-neuronal cells by promoting the association of mTORC2 with Akt1 which is critical for the downstream signaling cascade for adipogenesis. The function of Syap1 in the vertebrate nervous system, however, is unknown so far. The present study provides a first description of the subcellular localization of mouse Syap1 in cultured motoneurons as well as in selected structures of the adult mouse nervous system and reports initial functional experiments. Preceding all descriptive experiments, commercially available Syap1 antibodies were tested for their specificity and suitability for this study. One antibody raised against the human protein was found to recognize specifically both the human and murine Syap1 protein, providing an indispensable tool for biochemical, immunocytochemical and immunohistochemical studies. In the course of this work, a Syap1 knockout mouse was established and investigated. These mice are viable and fertile and do not show obvious changes in morphology or phenotype. As observed for Sap47 in flies, Syap1 is widely distributed in the synaptic neuropil, particularly in regions rich in glutamatergic synapses but it was also detected at perinuclear Golgi-associated sites in certain groups of neuronal somata. In motoneurons the protein is especially observed in similar perinuclear structures, partially overlapping with Golgi markers and in axons, dendrites and axonal growth cones. Biochemical and immunohistochemical analyses showed widespread Syap1 expression in the central nervous system with regionally distinct distribution patterns in cerebellum, hippocampus or olfactory bulb. Besides its expression in neurons, Syap1 is also detected in non-neuronal tissue e.g. liver, kidney and muscle tissue. In contrast, non-neuronal cells in the brain lack the typical perinuclear accumulation. First functional studies with cultured primary motoneurons on developmental, structural and functional aspects reveal no influence of Syap1 depletion on survival and morphological features such as axon length or dendritic length. Contrary to expectations, in neuronal tissues or cultured motoneurons a reduction of Akt phosphorylation at Ser473 or Thr308 was not detected after Syap1 knockdown or knockout.},
  subject      = {Synapse},
  language  = {en}
}
@phdthesis{Paul2014,
  author    = {Paul, Mila Marie},
  title     = {Vesikelverkehr in Aktiven Zonen},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-110791},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {Aktive Zonen (AZs) sind hoch spezialisierte, subzellul{\"a}re Kompartimente von Neuronen, die der synaptischen {\"U}bertragung dienen. Sie enthalten Ger{\"u}stproteine wie RIM (Rab3 interacting molecule) sowie elektronendichte Projektionen bestehend aus Bruchpilot bei Drosophila melanogaster oder Bassoon im S{\"a}uger, welche Schl{\"u}sselkomponenten des Vesikelverkehrs darstellen. Bei der Fliege sind Anzahl und Verteilung von Bruchpilot-Molek{\"u}len in AZs relevant f{\"u}r die funktionelle Differenzierung. Ihre Anordnung wird im Abstand von weniger als einem Mikrometer innerhalb einer pr{\"a}synaptischen Endigung reguliert. Im Rahmen der vorliegenden Arbeit wurden elektrophysiologische Ableitungen und konfokale sowie h{\"o}chstaufl{\"o}sende, immunhistochemische Bildgebung mit dem dSTORM (direct Stochastic Optical Reconstruction Microscopy) Verfahren an larvalen, neuromuskul{\"a}ren Synapsen von Drosophila durchgef{\"u}hrt. Dabei wurde das genetische Potenzial des Modellorganismus genutzt, um relevante Proteinfunktionen und -interaktionen zu analysieren. RIM als zentrale Komponente Aktiver Zonen ist relevant f{\"u}r synaptische Plastizit{\"a}t. Eine als CORD7 (cone-rod dystrophy type 7) bezeichnete Punktmutation (Arginin zu Histidin) innerhalb der 310 Helix der C2A-Dom{\"a}ne von RIM wurde mit erh{\"o}hten kognitiven F{\"a}higkeiten einer Patientengruppe in Verbindung gebracht. Weil die Drosophila C2A-Dom{\"a}ne eine hohe Homologie zur S{\"a}ugerdom{\"a}ne aufweist, konnte der Einfluss dieser Mutation auf Struktur und Funktion von Synapsen untersucht werden. Es zeigte sich, dass der Aminos{\"a}ureaustausch der CORD7-Position und des benachbarten Arginin-Restes die synaptische Organisation und Transmission beeinflussen. In einer Reihe weiterer Experimente wurde das Zusammenspiel von Bruchpilot und Synaptotagmin, dem Calciumsensor der evozierten Transmitterfreisetzung, analysiert. W{\"a}hrend AZs ohne Bruchpilot auch ohne Synaptotagmin funktionieren, f{\"u}hrt dessen Reduktion zu einer Umverteilung von Bruchpilot-Molek{\"u}len innerhalb von AZs und zu dramatischen {\"A}nderungen in ihrer Anzahl. Abschließend wurde so ein Beitrag zum Verst{\"a}ndnis der molekularen Organisation synaptischer Informationsverarbeitung und Plastizit{\"a}t geleistet, wobei zu kl{\"a}ren bleibt, wie die zuverl{\"a}ssige Speicherung von Informationen an AZs erreicht werden kann.},
  subject      = {Aktive Zonen},
  language  = {de}
}
@phdthesis{Ehmann2015,
  author    = {Ehmann, Nadine},
  title     = {Linking the active zone ultrastructure to function in Drosophila},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-118186},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2015},
  abstract  = {Accurate information transfer between neurons governs proper brain function. At chemical synapses, communication is mediated via neurotransmitter release from specialized presynaptic intercellular contact sites, so called active zones. Their molecular composition constitutes a precisely arranged framework that sets the stage for synaptic communication. Active zones contain a variety of proteins that deliver the speed, accuracy and plasticity inherent to neurotransmission. Though, how the molecular arrangement of these proteins influences active zone output is still ambiguous. Elucidating the nanoscopic organization of AZs has been hindered by the diffraction-limited resolution of conventional light microscopy, which is insufficient to resolve the active zone architecture on the nanometer scale. Recently, super-resolution techniques entered the field of neuroscience, which yield the capacity to bridge the gap in resolution between light and electron microscopy without losing molecular specificity. Here, localization microscopy methods are of special interest, as they can potentially deliver quantitative information about molecular distributions, even giving absolute numbers of proteins present within cellular nanodomains. This thesis puts forward an approach based on conventional immunohistochemistry to quantify endogenous protein organizations in situ by employing direct stochastic optical reconstruction microscopy (dSTORM). Focussing on Bruchpilot (Brp) as a major component of Drosophila active zones, the results show that the cytomatrix at the active zone is composed of units, which comprise on average ~137 Brp molecules, most of which are arranged in approximately 15 heptameric clusters. To test for a quantitative relationship between active zone ultrastructure and synaptic output, Drosophila mutants and electrophysiology were employed. The findings indicate that the precise spatial arrangement of Brp reflects properties of short-term plasticity and distinguishes distinct mechanistic causes of synaptic depression. Moreover, functional diversification could be connected to a heretofore unrecognized ultrastructural gradient along a Drosophila motor neuron.},
  subject      = {Taufliege},
  language  = {en}
}
@phdthesis{Werner2014,
  author    = {Werner, Christian},
  title     = {Effect of autoantibodies targeting amphiphysin or glutamate decarboxylase 65 on synaptic transmission of GABAergic neurons},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-105648},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2014},
  abstract  = {The number of newly detected autoantibodies (AB) targeting synaptic proteins in neurological disorders of the central nervous system (CNS) is steadily increasing. Direct interactions of AB with their target antigens have been shown in first studies but the exact pathomecha-nisms for most of the already discovered AB are still unclear. The present study investigates pathophysiological mechanisms of AB-fractions that are associated with the enigmatic CNS disease Stiff person syndrome (SPS) and target the synaptically located proteins amphiphysin or glutamate decarboxylase 65 (GAD65). In the first part of the project, effects of AB to the presynaptic endocytic protein amphiphysin were investigated. Ultrastructural investigations of spinal cord presynaptic boutons in an es-tablished in-vivo passive-transfer model after intrathecal application of human anti-amphiphysin AB showed a defect of endocytosis. This defect was apparent at high synaptic activity and was characterized by reduction of the synaptic vesicle pool, clathrin coated vesi-cles (CCVs), and endosome like structures (ELS) in comparison to controls. Molecular inves-tigation of presynaptic boutons in cultured murine hippocampal neurons with dSTORM microscopy after pretreatment with AB to amphiphysin revealed that marker proteins involved in vesicle exocytosis (synaptobrevin 2 and synaptobrevin 7) had an altered expression in GA-BAergic presynapses. Endophilin, a direct binding partner of amphiphysin also displayed a disturbed expression pattern. Together, these results point towards an anti-amphiphysin AB-induced defective organization in GABAergic synapses and a presumably compensatory rearrangement of proteins responsible for CME. In the second part, functional consequences of SPS patient derived IgG fractions containing AB to GAD65, the rate limiting enzyme for GABA synthesis, were investigated by patch clamp electrophysiology and immunohistology. GABAergic neurotransmission at low and high activity as well as short term plasticity appeared normal but miniature synaptic potentials showed an enhanced frequency with constant amplitudes. SPS patient IgG after preabsorption of GAD65-AB using recombinant GAD65 still showed specific synaptic binding to neu-rons and brain slices supporting the hypothesis that additional, not yet characterized AB are present in patient IgG responsible for the exclusive effect on frequency of miniature potentials. In conclusion, the present thesis uncovered basal pathophysiological mechanisms underlying paraneoplastic SPS induced by AB to amphiphysin leading to disturbed presynaptic architec-ture. In idiopathic SPS, the hypothesis of a direct pathophysiological role of AB to GAD65 was not supported and additional IgG AB are suspected to induce distinct synaptic malfunction.},
  subject      = {Autoaggressionskrankheit},
  language  = {en}
}
@phdthesis{Ljaschenko2013,
  author    = {Ljaschenko, Dmitrij},
  title     = {Hebbian plasticity at neuromuscular synapses of Drosophila},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-90465},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2013},
  abstract  = {Synaptic plasticity determines the development of functional neural circuits. It is widely accepted as the mechanism behind learning and memory. Among different forms of synaptic plasticity, Hebbian plasticity describes an activity-induced change in synaptic strength, caused by correlated pre- and postsynaptic activity. Additionally, Hebbian plasticity is characterised by input specificity, which means it takes place only at synapses, which participate in activity. Because of its correlative nature, Hebbian plasticity suggests itself as a mechanism behind associative learning. Although it is commonly assumed that synaptic plasticity is closely linked to synaptic activity during development, the mechanistic understanding of this coupling is far from complete. In the present study channelrhodopsin-2 was used to evoke activity in vivo, at the glutamatergic Drosophila neuromuscular junction. Remarkably, correlated pre- and postsynaptic stimulation led to increased incorporation of GluR-IIA-type glutamate receptors into postsynaptic receptor fields, thus boosting postsynaptic sensitivity. This phenomenon is input-specific. Conversely, GluR-IIA was rapidly removed from synapses at which neurotransmitter release failed to evoke substantial postsynaptic depolarisation. This mechanism might be responsible to tame uncontrolled receptor field growth. Combining these results with developmental GluR-IIA dynamics leads to a comprehensive physiological concept, where Hebbian plasticity guides growth of postsynaptic receptor fields and sparse transmitter release stabilises receptor fields by preventing overgrowth. Additionally, a novel mechanism of retrograde signaling was discovered, where direct postsynaptic channelrhodopsin-2 based stimulation, without involvement of presynaptic neurotransmitter release, leads to presynaptic depression. This phenomenon is reminiscent of a known retrograde homeostatic mechanism, of inverted polarity, where neurotransmitter release is upregulated, upon reduction of postsynaptic sensitivity.},
  subject      = {Synapse},
  language  = {en}
}
@phdthesis{Andlauer2013,
  author    = {Andlauer, Till Felix Malte},
  title     = {Structural and Functional Diversity of Synapses in the Drosophila CNS},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-85018},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2013},
  abstract  = {Large-scale anatomical and functional analyses of the connectivity in both invertebrate and mammalian brains have gained intense attention in recent years. At the same time, the understanding of synapses on a molecular level still lacks behind. We have only begun to unravel the basic mechanisms of how the most important synaptic proteins regulate release and reception of neurotransmitter molecules, as well as changes of synaptic strength. Furthermore, little is known regarding the stoichiometry of presynaptic proteins at different synapses within an organism. An assessment of these characteristics would certainly promote our comprehension of the properties of different synapse types. Presynaptic proteins directly influence, for example, the probability of neurotransmitter release as well as mechanisms for short-term plasticity. We have examined the strength of expression of several presynaptic proteins at different synapse types in the central nervous system of Drosophila melanogaster using immunohistochemistry. Clear differences in the relative abundances of the proteins were obvious on different levels: variations in staining intensities appeared from the neuropil to the synaptic level. In order to quantify these differences, we have developed a ratiometric analysis of antibody stainings. By application of this ratiometric method, we could assign average ratios of presynaptic proteins to different synapse populations in two central relays of the olfactory pathway. In this manner, synapse types could be characterized by distinct fingerprints of presynaptic protein ratios. Subsequently, we used the method for the analysis of aberrant situations: we reduced levels of Bruchpilot, a major presynaptic protein, and ablated different synapse or cell types. Evoked changes of ratio fingerprints were proportional to the modifications we had induced in the system. Thus, such ratio signatures are well suited for the characterization of synapses. In order to contribute to our understanding of both the molecular composition and the function of synapses, we also characterized a novel synaptic protein. This protein, Drep-2, is a member of the Dff family of regulators of apoptosis. We generated drep-2 mutants, which did not show an obvious misregulation of apoptosis. By contrast, Drep-2 was found to be a neuronal protein, highly enriched for example at postsynaptic receptor fields of the input synapses of the major learning centre of insects, the mushroom bodies. Flies mutant for drep-2 were viable but lived shorter than wildtypes. Basic synaptic transmission at both peripheral and central synapses was in normal ranges. However, drep-2 mutants showed a number of deficiencies in adaptive behaviours: adult flies were locomotor hyperactive and hypersensitive towards ethanol-induced sedation. Moreover, the mutant animals were heavily impaired in associative learning. In aversive olfactory conditioning, drep-2 mutants formed neither short-term nor anaesthesia-sensitive memories. We could demonstrate that Drep-2 is required in mushroom body intrinsic neurons for normal olfactory learning. Furthermore, odour-evoked calcium transients in these neurons, a prerequisite for learning, were reduced in drep-2 mutants. The impairment of the mutants in olfactory learning could be fully rescued by pharmacological application of an agonist to metabotropic glutamate receptors (mGluRs). Quantitative mass spectrometry of Drep-2 complexes revealed that the protein is associated with a large number of translational repressors, among them the fragile X mental retardation protein FMRP. FMRP inhibits mGluR-mediated protein synthesis. Lack of this protein causes the fragile X syndrome, which constitutes the most frequent monogenic cause of autism. Examination of the performance of drep-2 mutants in courtship conditioning showed that the animals were deficient in both short- and long-term memory. Drep-2 mutants share these phenotypes with fmrp and mGluR mutants. Interestingly, drep-2; fmrp double mutants exhibited normal memory. Thus, we propose a model in which Drep-2 antagonizes FMRP in the regulation of mGluR-dependent protein synthesis. Our hypothesis is supported by the observation that impairments in synaptic plasticity can arise if mGluR signalling is imbalanced in either direction. We suggest that Drep-2 helps in establishing this balance.},
  subject      = {Taufliege},
  language  = {en}
}
@phdthesis{Schleyer2012,
  author    = {Schleyer, Michael},
  title     = {Integrating past, present and future: mechanisms of a simple decision in larval Drosophila},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-78923},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {Is behaviour response or action? In this Thesis I study this question regarding a rather simple organism, the larva of the fruit fly Drosophila melanogaster. Despite its numerically simple brain and limited behavioural repertoire, it is nevertheless capable to accomplish surprisingly complex tasks. After association of an odour and a rewarding or punishing reinforcement signal, the learnt odour is able to retrieve the formed memory trace. However, the activated memory trace is not automatically turned into learned behaviour: Appetitive memory traces are behaviourally expressed only in absence of the rewarding tastant whereas aversive memory traces are behaviourally expressed in the presence of the punishing tastant. The 'decision' whether to behaviourally express a memory trace or not relies on a quantitive comparison between memory trace and current situation: only if the memory trace (after odour-sugar training) predicts a stronger sugar reward than currently present, animals show appetitive conditioned behaviour. Learned appetitive behaviour is best seen as active search for food - being pointless in the presence of (enough) food. Learned aversive behaviour, in turn, can be seen as escape from a punishment - being pointless in absence of punishment. Importantly, appetitive and aversive memory traces can be formed and retrieved independent from each other but also can, under appriate circumstances, summate to jointly organise conditioned behaviour. In contrast to learned behaviour, innate olfactory behaviour is not influenced by gustatory processing and vice versa. Thus, innate olfactory and gustatory behaviour is rather rigid and reflexive in nature, being executed almost regardless of other environmental cues. I suggest a behavioural circuit-model of chemosensory behaviour and the 'decision' process whether to behaviourally express a memory trace or not. This model reflects known components of the larval chemobehavioural circuit and provides clear hypotheses about the kinds of architecture to look for in the currently unknown parts of this circuit. The second chapter deals with gustatory perception and processing (especially of bitter substances). Quinine, the bitter tastant in tonic water and bitter lemon, is aversive for larvae, suppresses feeding behaviour and can act as aversive reinforcer in learning experiments. However, all three examined behaviours differ in their dose-effect dynamics, suggesting different molecular and cellular processing streams at some level. Innate choice behaviour, thought to be relatively reflexive and hard-wired, nevertheless can be influenced by the gustatory context. That is, attraction toward sweet tastants is decreased in presence of bitter tastants. The extent of this inhibitory effect depends on the concentration of both sweet and bitter tastant. Importantly, sweet tastants differ in their sensitivity to bitter interference, indicating a stimulus-specific mechanism. The molecular and cellular processes underlying the inhibitory effect of bitter tastants are unknown, but the behavioural results presented here provide a framework to further investigate interactions of gustatory processing streams.},
  subject      = {Lernen},
  language  = {en}
}
@phdthesis{Gruenewald2012,
  author    = {Gr{\"u}newald, Benedikt},
  title     = {Autoantik{\"o}rper-vermittelte St{\"o}rungen der synaptischen {\"U}bertragung im ZNS},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-73283},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2012},
  abstract  = {Die Anzahl neurologischer Erkrankungen bei denen Autoantik{\"o}rper gegen zentralnerv{\"o}se An-tigene bekannt sind, hat in den letzten Jahren deutlich zugenommen. Allerdings gibt es nur f{\"u}r wenige dieser Erkrankungen hinreichende experimentelle Belege f{\"u}r eine pathogene Wir-kung der Autoantik{\"o}rper. Zwei dieser Erkrankungen wurden im Rahmen dieser Arbeit n{\"a}her untersucht: die Juvenile Neuronale Zeroid-Lipofuszinose (JNCL) mit Autoantik{\"o}rpern gegen die 65 kD Isoform der Glutamatdecarboxylase und das Stiff Person Syndrom (SPS) mit Auto-antik{\"o}rpern gegen Amphiphysin. Die ph{\"a}notypische Charakterisierung der cln3 knockout-Maus, einem Mausmodell f{\"u}r die JNCL, zeigte eine progressive Verschlechterung der motorischen und koordinativen F{\"a}-higkeiten, eingeschr{\"a}nktes reizbedingtes Lernen und gesteigertes angst{\"a}hnliches Verhalten. Diese Symptome {\"a}hneln denen der humanen Erkrankung. Elektrophysiologisch konnte eine Antik{\"o}rper-induzierte zerebell{\"a}re Dysfunktion identifiziert werden, die einer verminderten lokalen GABAergen Hemmung zugeordnet wird. Eine Reduktion der Antik{\"o}perproduktion im Tiermodell durch eine Depletion der Plasmazellen durch den Proteseinhibitor Bortezomib hatte einen positiven Effekt auf die Krankheitsentwicklung. Im zweiten experimentellen Teil der Arbeit wurde der Einfluss von Autoantik{\"o}rpern gegen Amphiphysin von Patienten mit SPS auf die synaptische Transmission untersucht. Es zeigte sich hierbei in Patch-Clamp Experimenten eine St{\"o}rung der GABAergen {\"U}bertragung v.a. bei hochfrequenter Stimulation, was im Einklang mit dem vermuteten Antik{\"o}rper-induzierten Endozytosedefekt steht. Passiver Transfer von humanen Autoantik{\"o}rpern gegen Amphiphysin induzierte angst-{\"a}hnliches Verhalten in Ratten, einem weiteren Kernsymptom des SPS. Aktive Immunisierung gegen Amphiphysin und anschließende {\"O}ffnung der Blut-Hirn-Schranke in M{\"a}usen f{\"u}hrte zu einer subklinischen Ver{\"a}nderung der Reflexverarbeitung von Ia Afferenzen auf Motoneurone im R{\"u}ckenmark der M{\"a}use. Insgesamt konnten in zwei Erkrankungen des ZNS autoimmune Mechanismen identifi-ziert werden, die zu einer Antik{\"o}rper-induzierten Fehlregulation der zentralen synaptischen Transmission f{\"u}hren. Diese Ergebnisse k{\"o}nnen wegweisend sein auch f{\"u}r die Erforschung der Pathophysiologie anderer Antik{\"o}rper-assoziierte Erkrankungen des ZNS.},
  subject      = {Glutamat-Decarboxylase},
  language  = {de}
}
@phdthesis{Halder2011,
  author    = {Halder, Partho},
  title     = {Identification and characterization of synaptic proteins of Drosophila melanogaster using monoclonal antibodies of the Wuerzburg Hybridoma Library},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-67325},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2011},
  abstract  = {For a large fraction of the proteins expressed in the human brain only the primary structure is known from the genome project. Proteins conserved in evolution can be studied in genetic models such as Drosophila. In this doctoral thesis monoclonal antibodies (mAbs) from the Wuerzburg Hybridoma library are produced and characterized with the aim to identify the target antigen. The mAb ab52 was found to be an IgM which recognized a cytosolic protein of Mr ~110 kDa on Western blots. The antigen was resolved by two-dimensional gel electrophoresis (2DE) as a single distinct spot. Mass spectrometric analysis of this spot revealed EPS-15 (epidermal growth factor receptor pathway substrate clone 15) to be a strong candidate. Another mAb from the library, aa2, was already found to recognize EPS-15, and comparison of the signal of both mAbs on Western blots of 1D and 2D electrophoretic separations revealed similar patterns, hence indicating that both antigens could represent the same protein. Finally absence of the wild-type signal in homozygous Eps15 mutants in a Western blot with ab52 confirmed the ab52 antigen to be EPS-15. Thus both the mAbs aa2 and ab52 recognize the Drosophila homologue of EPS-15. The mAb aa2, being an IgG, is more suitable for applications like immunoprecipitation (IP). It has already been submitted to the Developmental Studies Hybridoma Bank (DSHB) to be easily available for the entire research community. The mAb na21 was also found to be an IgM. It recognizes a membrane associated antigen of Mr ~10 kDa on Western blots. Due to the membrane associated nature of the protein, it was not possible to resolve it by 2DE and due to the IgM nature of the mAb it was not possible to enrich the antigen by IP. Preliminary attempts to biochemically purify the endogenously expressed protein from the tissue, gave promising results but could not be completed due to lack of time. Thus biochemical purification of the protein seems possible in order to facilitate its identification by mass spectrometry. Several other mAbs were studied for their staining pattern on cryosections and whole mounts of Drosophila brains. However, many of these mAbs stained very few structures in the brain, which indicated that only a very limited amount of protein would be available as starting material. Because these antibodies did not produce signals on Western blots, which made it impossible to enrich the antigens by electrophoretic methods, we did not attempt their purification. However, the specific localization of these proteins makes them highly interesting and calls for their further characterization, as they may play a highly specialized role in the development and/or function of the neural circuits they are present in. The purification and identification of such low expression proteins would need novel methods of enrichment of the stained structures.},
  subject      = {Taufliege},
  language  = {en}
}
@phdthesis{Jauch2010,
  author    = {Jauch, Mandy},
  title     = {Die Serin/Arginin Proteinkinase 79D (SRPK79D) von Drosophila melanogaster und ihre Rolle bei der Bildung Aktiver Zonen von Synapsen},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-53974},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Synapsen als Stellen der Kommunikation zwischen Neuronen besitzen spezialisierte Bereiche - Aktive Zonen (AZs) genannt -, die aus einem hoch komplexen Netzwerk von Proteinen aufgebaut sind und die Maschinerie f{\"u}r den Prozess der Neurotransmitter-Aussch{\"u}ttung und das Vesikel-Recycling beinhalten. In Drosophila ist das Protein Bruchpilot (BRP) ein wichtiger Baustein f{\"u}r die T-f{\"o}rmigen B{\"a}nder („T-Bars") der pr{\"a}synaptischen Aktiven Zonen. BRP ist notwendig f{\"u}r eine intakte Struktur der Aktiven Zone und eine normale Exocytose von Neurotransmitter-Vesikeln. Auf der Suche nach Mutationen, welche die Verteilung von Bruchpilot im Gewebe beeintr{\"a}chtigen, wurde eine P-Element-Insertion im Gen CG11489 an der Position 79D identifiziert, welches eine Kinase kodiert, die einen hohen Grad an Homologie zur Familie der SR Proteinkinasen (SRPKs) von S{\"a}ugern aufweist. Die Mitglieder dieser Familie zeichnen sich durch eine evolution{\"a}r hoch konservierte zweigeteilte Kinasedom{\"a}ne aus, die durch eine nicht konservierte Spacer-Sequenz unterbrochen ist. SRPKs phosphorylieren SR-Proteine, die zu einer evolution{\"a}r hoch konservierten Familie Serin/Arginin-reicher Spleißfaktoren geh{\"o}ren und konstitutive sowie alternative Spleißprozesse steuern und damit auf post-transkriptioneller Ebene die Genexpression regulieren. Mutation des Srpk79D-Gens durch die P-Element-Insertion (Srpk79DP1) oder eine Deletion im Gen (Srpk79DVN Nullmutante) f{\"u}hrt zu auff{\"a}lligen BRP-Akkumulationen in larvalen und adulten Nerven. In der vorliegenden Arbeit wird gezeigt, dass diese BRP-Akkumulationen auf Ultrastruktur-Ebene ausgedehnten axonalen Agglomeraten elektronendichter B{\"a}nder entsprechen und von klaren Vesikeln umgeben sind. Charakterisierung durch Immuno-Elektronenmikroskopie ergab, dass diese Strukturen BRP-immunoreaktiv sind. Um die Bildung BRP-enthaltender Agglomerate in Axonen zu verhindern und damit eine intakte Gehirnfunktion zu gew{\"a}hrleisten, scheint die SRPK79D nur auf niedrigem Niveau exprimiert zu werden, da die endogene Kinase mit verschiedenen Antik{\"o}rpern nicht nachweisbar war. Wie in anderen Arbeiten gezeigt werden konnte, ist die Expression der PB-, PC- oder PF-Isoform der vier m{\"o}glichen SRPK79D-Varianten, die durch alternativen Transkriptionsstart in Exon eins beziehungsweise drei und alternatives Spleißen von Exon sieben zustande kommen, zur Rettung des Ph{\"a}notyps der BRP-Akkumulation im Srpk79DVN Nullmutanten-Hintergrund ausreichend. Zur Charakterisierung der Rescue-Eigenschaften der SRPK79D-PE-Isoform wurde mit der Klonierung der cDNA in einen UAS-Vektor begonnen. Offenbar beruht die Bildung der axonalen BRP-Agglomerate nicht auf einer {\"U}berexpression von BRP in den betroffenen Neuronen, denn auch bei reduzierter Expression des BRP-Proteins im Srpk79DVN Nullmutanten-Hintergrund entstehen die BRP-Agglomerate. In K{\"o}pfen der Srpk79DVN Nullmutante ist die Gesamtmenge an Bruchpilot-Protein im Vergleich zum Wildtyp nicht deutlich ver{\"a}ndert. Auch die auf Protein-Ebene untersuchte Expression der verschiedenen Isoformen der pr{\"a}synaptischen Proteine Synapsin, Sap47 und CSP weicht in der Srpk79DVN Nullmutante nicht wesentlich von der Wildtyp-Situation ab, sodass sich keine Hinweise auf ver{\"a}ndertes Spleißen der entsprechenden pr{\"a}-mRNAs ergeben. Jedes der sieben bekannten SR-Proteine von Drosophila ist ein potentielles Zielprotein der SRPK79D. Knock-down-Experimente f{\"u}r die drei hier untersuchten SR-Proteine SC35, X16/9G8 und B52/SRp55 im gesamten Nervensystem durch RNA-Interferenz zeigten allerdings keinen Effekt auf die Verteilung von BRP im Gewebe. Hinsichtlich der Flugf{\"a}higkeit der Tiere hat die Srpk79DVN Nullmutation keinen additiven Effekt zum Knock-down des BRP-Proteins, denn die Doppelmutanten zeigten bei der Bestimmung des Anteils an flugunf{\"a}higen Tieren vergleichbare Werte wie die Einzelmutanten, die entweder die Nullmutation im Srpk79D-Gen trugen, oder BRP reduziert exprimierten. Vermutlich sind Bruchpilot und die SR Proteinkinase 79D somit Teil desselben Signalwegs. Durch Doppelf{\"a}rbungen mit Antik{\"o}rpern gegen BRP und CAPA-Peptide wurde abschließend entdeckt, dass Bruchpilot auch im Median- und Transvers-Nervensystem (MeN/TVN) von Drosophila zu finden ist, welche die Neuroh{\"a}mal-Organe beherbergen. Aufgabe dieser Organe ist die Speicherung und Aussch{\"u}ttung von Neuropeptid-Hormonen. Daher ist zu vermuten, dass das BRP-Protein neben Funktionen bei der Neurotransmitter-Exocytose m{\"o}glicherweise eine Rolle bei der Aussch{\"u}ttung von Neuropeptiden spielt. Anders als in den Axonen der larvalen Segmental- und Intersegmentalnerven der Srpk79DVN Nullmutante, die charakteristische BRP-Agglomerate aufweisen, hat die Mutation des Srpk79D-Gens in den Axonen der Va-Neurone, die das MeN/TVN-System bilden, keinen sichtbaren Effekt auf die Verteilung von Brp, denn das Muster bei F{\"a}rbung gegen BRP weist keine deutlichen Ver{\"a}nderungen zum Wildtyp auf.},
  subject      = {Taufliege},
  language  = {de}
}
@phdthesis{Fouquet2008,
  author    = {Fouquet, Wernher},
  title     = {Analysis of synapse assembly in Drosophila melanogaster},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-38173},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2008},
  abstract  = {The majority of rapid cell-to-cell communication mechanisms and information processing within the nervous system makes use of chemical synapses. Fast neurotransmission on these sites not only requires very close apposition of pre- and postsynaptic partners, but also depends on an effective structural arrangement of cellular components on both sides of the synaptic cleft. Synaptic vesicles fuse at active zones (AZs), characterized by an electron-dense protein mesh of insufficiently characterized composition and function. EM analysis of synapses identified electron dense structures thought (but not proven) to play an important role for vesicle release efficacy. The molecular organization of presynaptic AZs during Ca2+ influx-triggered neurotransmitter release is currently a focus of intense investigation. Due to its appearance in electron micrographs, dense bodies at Drosophila synapses were named T-bars. Together with the lab of Erich Buchner, we recently showed that Bruchpilot (BRP) of the Drosophila melanogaster, homologous to the mammalian CAST/ERC family in its N-terminal half, is essential for the T-bar assembly at AZs and efficient neurotransmitter release respectively. The question, in which way BRP contributes to functional and structural organization of the AZ, was a major focus of this thesis. First, stimulated emission depletion microscopy (STED), featuring significantly increased optical resolution, was used to achieve first insights into 'cytoarchitecture' of the AZ compartment. In addition, in vivo live imaging experiments following identified populations of synapses over extended periods were preformed to address the trafficking of protein at forming synapses and thereby providing a temporal sequence for the AZ assembly process. Apart from BRP, two additional AZ proteins, DLiprin-\&\#945; and DSyd-1, were included into the analysis, which were both shown to contribute to efficient AZ assembly. Drosophila Syd-1 (DSyd-1) and Drosophila Liprin-\&\#945; (DLiprin-\&\#945;) clusters initiated AZ assembly, finally forming discrete 'quanta' at the AZ edge. ELKS-related Bruchpilot, in contrast, accumulated late from diffuse pools in the AZ center, where it contributed to the electron dense specialization by adopting an extended conformation vertical to the AZ membrane. We show that DSyd-1 and DLiprin-\&\#945; are important for efficient AZ formation. The results of this thesis describe AZ assembly as a sequential protracted process, with matured AZs characterized by sub-compartments and likely quantal building blocks. This step-wise, in parts reversible path leading to mature AZ structure and function offers new control possibilities in the development and plasticity of synaptic circuits.},
  subject      = {Synapse},
  language  = {en}
}
@phdthesis{Wagh2005,
  author    = {Wagh, Dhananjay Anil},
  title     = {"Bruchpilot" -molecular and functional characterization of a novel active zone protein at the Drosophila synapse},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-14989},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2005},
  abstract  = {Chemical neurotransmission is a complex process of central importance for nervous system function. It is thought to be mediated by the orchestration of hundreds of proteins for its successful execution. Several synaptic proteins have been shown to be relevant for neurotransmission and many of them are highly conserved during evolution- suggesting a universal mechanism for neurotransmission. This process has checkpoints at various places like, neurotransmitter uptake into the vesicles, relocation of the vesicles to the vicinity of calcium channels in order to facilitate Ca2+ induced release thereby modulating the fusion probability, formation of a fusion pore to release the neurotransmitter and finally reuptake of the vesicles by endocytosis. Each of these checkpoints has now become a special area of study and maintains its own importance for the understanding of the overall process. Ca2+ induced release occurs at specialized membrane structures at the synapse known as the active zones. These are highly ordered electron dense grids and are composed of several proteins which assist the synaptic vesicles in relocating in the vicinity of Ca2+ channels thereby increasing their fusion probability and then bringing about the vesicular fusion itself. All the protein modules needed for these processes are thought to be held in tight arrays at the active zones, and the functions of a few have been characterized so far at the vertebrate active zones. Our group is primarily interested in characterizing the molecular architecture of the Drosophila synapse. Due to its powerful genetics and well-established behavioural assays Drosophila is an excellent system to investigate neuronal functioning. Monoclonal antibodies (MABs) from a hybridoma library against Drosophila brain are routinely used to detect novel proteins in the brain in a reverse genetic approach. Upon identification of the protein its encoding genetic locus is characterized and a detailed investigation of its function is initiated. This approach has been particularly useful to detect synaptic proteins, which may go undetected in a forward genetic approach due to lack of an observable phenotype. Proteins like CSP, Synapsin and Sap47 have been identified and characterized using this approach so far. MAB nc82 has been one of the shortlisted antibodies from the same library and is widely used as a general neuropil marker due to the relative transparency of immunohistochemical whole mount staining obtained with this antibody. A careful observation of double stainings at the larval neuromuscular junctions with MAB nc82 and other pre and post-synaptic markers strongly suggested an active zone localization of the nc82 antigen. Synaptic architecture is well characterized in Drosophila at the ultrastructural level. However, molecular details for many synaptic components and especially for the active zone are almost entirely unknown. A possible localization at the active zone for the nc82 antigen served as the motivation to initiate its biochemical characterization and the identification of the encoding gene. In the present thesis it is shown by 2-D gel analysis and mass spectrometry that the nc82 antigen is a novel active zone protein encoded by a complex genetic locus on chromosome 2R. By RT-PCR exons from three open reading frames previously annotated as separate genes are demonstrated to give rise to a transcript of at least 5.5 kb. Northern blots produce a prominent signal of 11 kb and a weak signal of 2 kb. The protein encoded by the 5.5 kb transcript is highly conserved amongst insects and has at its N-terminus significant homology to the previously described vertebrate active zone protein ELKS/ERC/CAST. Bioinformatic analysis predicts coiled-coil domains spread all over the sequence and strongly suggest a function involved in organizing or maintaining the structure of the active zone. The large C-terminal region is highly conserved amongst the insects but has no clear homologues in veretebrates. For a functional analysis of this protein transgenic flies expressing RNAi constructs under the control of the Gal4 regulated enhancer UAS were kindly provided by the collaborating group of S.Sigrist (G\&\#1616;ttingen). A strong pan-neuronal knockdown of the nc82 antigen by transgenic RNAi expression leads to embryonic lethality. A relatively weaker RNAi expression results in behavioural deficits in adult flies including unstable flight and impaired walking behavior. Due to this peculiar phenotype as observed in the first knockdown studies the gene was named "bruchpilot" (brp) encoding the protein "Bruchpilot (BRP)" (German for crash pilot). A pan-neuronal as well as retina specific downregulation of this protein results in loss of ON and OFF transients in ERG recordings indicating dysfunctional synapses. Retina specific downregulation also shows severely impaired optomotor behaviour. Finally, at an ultrastructural level BRP downregulation seems to impair the formation of the characteristic T-shaped synaptic ribbons at the active zones without significantly altering the overall synaptic architecture (in collaboration with E.Asan). Vertebrate active zone protein Bassoon is known to be involved in attaching the synaptic ribbons to the active zones as an adapter between active zone proteins RIBEYE and ERC/CAST. A mutation in Bassoon results in a floating synaptic ribbon phenotype. No protein homologous to Bassoon has been observed in Drosophila. BRP downregulation also results in absence of attached synaptic ribbons at the active zones. This invites the speculation of an adapter like function for BRP in Drosophila. However, while Bassoon mutant mice are viable, BRP deficit in addition to the structural phenotype also results in severe behavioural and physiological anomalies and even stronger downregulation causes embryonic lethality. This therefore suggests an additional and even more important role for BRP in development and normal functioning of synapses in Drosophila and also in other insects. However, how BRP regulates synaptic transmission and which other proteins are involved in this BRP dependant pathway remains to be investigated. Such studies certainly will attract prominent attention in the future.},
  subject      = {Taufliege},
  language  = {en}
}
@phdthesis{Huber2003,
  author    = {Huber, Saskia},
  title     = {Charakterisierung von SAP47 in Drosophila melanogaster und der dazugeh{\"o}rigen Proteinfamilie},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-7777},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2003},
  abstract  = {In der Arbeit wird ein synapsenassoziiertes Protein, das SAP47 und seine zugeh{\"o}rige Proteinfamilie charakterisiert.},
  subject      = {Taufliege},
  language  = {de}
}
@phdthesis{Funk2003,
  author    = {Funk, Natalja},
  title     = {Das Sap47-Gen aus Drosophila melanogaster : Gezielte Mutagenisierung und Suche nach Interaktionspartnern},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-7667},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2003},
  abstract  = {SAP47 ist ein Synapsenassoziiertes Protein von 47 kDa aus Drosophila melanogaster, das zu einer neuen Proteinfamilie geh{\"o}rt. Um eine Sap47 Mutante zu erzeugen wurden drei Methoden eingesetzt: Gezielte Mutagenese durch homologe Rekombination, RNA interference (RNAi) und Transposon Remobilisierung. Um einen Interaktionspartner f{\"u}r das SAP47 Protein zu identifizieren wurden ein Yeast-Two-Hybrid System und das "CytoTrap" Verfahren eingesetzt.},
  subject      = {Taufliege},
  language  = {de}
}