@misc{Neitzke2022, type = {Master Thesis}, author = {Neitzke, Hannes}, title = {"Maskulin und Feminin schuf er sie" - Die Personennamen in der Hebr{\"a}ischen Bibel im Lichte der Geschlechterdifferenz unter besonderer Ber{\"u}cksichtigung der Frauennamen}, doi = {10.25972/OPUS-25197}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-251972}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2022}, abstract = {Diese Magisterarbeit untersucht die althebr{\"a}ischen biblischen und epigraphischen Personennamen unter dem Gesichtspunkt des Geschlechts. Nach einem Durchgang durch die Forschungsgeschichte zu Frauennamen werden verschiedene Definitionsm{\"o}glichkeiten f{\"u}r den Begriff „Frauenname" diskutiert. Die Spezifika von Frauennamen werden mithilfe der Datenbank ,Althebr{\"a}ische Personennamen' (DAHPN) ermittelt und gedeutet, abschließend wird auf die Geburt und Namengebung von T{\"o}chtern in der Hebr{\"a}ischen Bibel eingegangen.}, subject = {Bibel. Altes Testament}, language = {de} } @phdthesis{Braag2022, author = {Braag, Aaron}, title = {10 Jahres Ergebnisse nach muskelschonendem modifiziertem Watson Jones Zugang bei der Implantation von H{\"u}fttotalendoprothesen}, doi = {10.25972/OPUS-28141}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-281416}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2022}, abstract = {Bei der Implantation von H{\"u}fttotalendoprothesen (HTEP) finden seit etwa 15 Jahren minimalinvasive muskelschonende Zug{\"a}nge zunehmend Verwendung. Langfristige Daten der Zug{\"a}nge, insbesondere des minimalinvasiven anterolateralen Zuganges nach Watson-Jones (ALMI) sind in der Literatur bisher nur unzureichend vorhanden. Methodik: Ziel dieser Studie war es ein Kollektiv nach HTEP Implantation mit ALMI Zugang mit einem Kollektiv nach HTEP Implantation mit lateralem Zugang nach 10 Jahren hinsichtlich Gelenksfunktion, Muskelfunktion, Zufriedenheit und radiologischer Parameter zu vergleichen und etwaige Unterschiede in der Langzeitbilanz zu detektieren. Zwei Kollektive mit jeweils 29 operierten H{\"u}ftgelenken, Erstimplantation durch die gleichen Operateure in den Jahren 2005 bis 2008, wurden im Diakoniewerk M{\"u}nchen-Maxvorstadt nachuntersucht. Die daf{\"u}r herangezogenen Parameter waren Harris Hip Score, Forgotten Joint Score-12, klinische Pr{\"u}fung des Trendelenburg Zeichens, postoperative R{\"o}ntgenbildgebung, Auftreten von Komplikationen und Narbenl{\"a}nge. Ergebnisse \& Schlussfolgerungen: Die beiden Kollektive zeigten in den Parametern Harris Hip Score, Forgotten Joint Score und klinische Pr{\"u}fung des Trendelenburg Zeichens geringf{\"u}gige Unterschiede zugunsten des ALMI Kollektivs, die jedoch nicht signifikant waren. Beide Kollektive erreichten in den beschriebenen Scores sehr gute bis exzellente Ergebnisse nach 10 Jahren. Das geringere Auftreten eines auff{\"a}lligen Trendelenburg Zeichens im ALMI Kollektiv (13,8 vs. 6,9 \%) gibt Hinweise auf eine verbesserte Funktion der Glutealmuskulatur durch die intraoperative Muskelschonung. Die beiden Zug{\"a}nge zeigten in den radiologischen Parametern und der Komplikationsrate ebenb{\"u}rtige Ergebnisse. Vermehrte Fehlpositionierungen wurden im ALMI Kollektiv nicht beobachtet. Unsere Beobachtungen passen zu den wenigen vorhandenen in der Literatur beschriebenen Ergebnissen von minimalinvasiven muskelschonenden Zug{\"a}ngen in der Langzeitbilanz.}, subject = {Minimalinvasiv}, language = {de} } @article{MuetzelFarrellShoyamaetal.2022, author = {M{\"u}tzel, Carina and Farrell, Jeffrey M. and Shoyama, Kazutaka and W{\"u}rthner, Frank}, title = {12b,24b-Diborahexabenzo[a,c,fg,l,n,qr]pentacene: A Low-LUMO Boron-Doped Polycyclic Aromatic Hydrocarbon}, series = {Angewandte Chemie International Edition}, volume = {61}, journal = {Angewandte Chemie International Edition}, number = {8}, doi = {10.1002/anie.202115746}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-318808}, year = {2022}, abstract = {Herein we devise and execute a new synthesis of a pristine boron-doped nanographene. Our target boron-doped nanographene was designed based on DFT calculations to possess a low LUMO energy level and a narrow band gap derived from its precise geometry and B-doping arrangement. Our synthesis of this target, a doubly B-doped hexabenzopentacene (B\(_{2}\)-HBP), employs six net C-H borylations of an alkene, comprising consecutive hydroboration/electrophilic borylation/dehydrogenation and BBr\(_{3}\)/AlCl\(_{3}\)/2,6-dichloropyridine-mediated C-H borylation steps. As predicted by our calculations, B\(_{2}\)-HBP absorbs strongly in the visible region and emits in the NIR up to 1150 nm in o-dichlorobenzene solutions. Furthermore, B\(_{2}\)-HBP possesses a very low LUMO level, showing two reversible reductions at -1.00 V and -1.17 V vs. Fc\(^{+}\)/Fc. Our methodology is surprisingly selective despite its implementation of unfunctionalized precursors and offers a new approach to the synthesis of pristine B-doped polycyclic aromatic hydrocarbons.}, language = {en} } @article{PliegerWolf2022, author = {Plieger, Tanja and Wolf, Matthias}, title = {18S and ITS2 rDNA sequence-structure phylogeny of Prototheca (Chlorophyta, Trebouxiophyceae)}, series = {Biologia}, volume = {77}, journal = {Biologia}, number = {2}, issn = {1336-9563}, doi = {10.1007/s11756-021-00971-y}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-269897}, pages = {569-582}, year = {2022}, abstract = {Protothecosis is an infectious disease caused by organisms currently classified within the green algal genus Prototheca. The disease can manifest as cutaneous lesions, olecranon bursitis or disseminated or systemic infections in both immunocompetent and immunosuppressed patients. Concerning diagnostics, taxonomic validity is important. Prototheca, closely related to the Chlorella species complex, is known to be polyphyletic, branching with Auxenochlorella and Helicosporidium. The phylogeny of Prototheca was discussed and revisited several times in the last decade; new species have been described. Phylogenetic analyses were performed using ribosomal DNA (rDNA) and partial mitochondrial cytochrome b (cytb) sequence data. In this work we use Internal Transcribed Spacer 2 (ITS2) as well as 18S rDNA data. However, for the first time, we reconstruct phylogenetic relationships of Prototheca using primary sequence and RNA secondary structure information simultaneously, a concept shown to increase robustness and accuracy of phylogenetic tree estimation. Using encoded sequence-structure data, Neighbor-Joining, Maximum-Parsimony and Maximum-Likelihood methods yielded well-supported trees in agreement with other trees calculated on rDNA; but differ in several aspects from trees using cytb as a phylogenetic marker. ITS2 secondary structures of Prototheca sequences are in agreement with the well-known common core structure of eukaryotes but show unusual differences in their helix lengths. An elongation of the fourth helix of some species seems to have occurred independently in the course of evolution.}, language = {en} } @article{ThurnerAugustinBleyetal.2022, author = {Thurner, Annette and Augustin, Anne Marie and Bley, Thorsten Alexander and Kickuth, Ralph}, title = {2D-perfusion angiography for intra-procedural endovascular treatment response assessment in chronic mesenteric ischemia: a feasibility study}, series = {BMC Medical Imaging}, volume = {22}, journal = {BMC Medical Imaging}, doi = {10.1186/s12880-022-00820-7}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301131}, year = {2022}, abstract = {Background Endovascular revascularization has become the first-line treatment of chronic mesenteric ischemia (CMI). The qualitative visual analysis of digital subtraction angiography (DSA) is dependent on observer experience and prone to interpretation errors. We evaluate the feasibility of 2D-Perfusion Angiography (2D-PA) for objective, quantitative treatment response assessment in CMI. Methods 49 revascularizations in 39 patients with imaging based evidence of mesenteric vascular occlusive disease and clinical signs of CMI were included in this retrospective study. To assess perfusion changes by 2D-PA, DSA-series were post-processed using a dedicated, commercially available software. Regions of interest (ROI) were placed in the pre- and post-stenotic artery segment. In aorto-ostial disease, the inflow ROI was positioned at the mesenteric artery orifice. The ratios outflow to inflow ROI for peak density (PD), time to peak and area-under-the-curve (AUC) were computed and compared pre- and post-interventionally. We graded motion artifacts by means of a four-point scale. Feasibility of 2D-PA and changes of flow parameters were evaluated. Results Motion artifacts due to a mobile vessel location beneath the diaphragm or within the mesenteric root, branch vessel superimposition and inadequate contrast enhancement at the inflow ROI during manually conducted DSA-series via selective catheters owing to steep vessel angulation, necessitated exclusion of 26 measurements from quantitative flow evaluation. The feasibility rate was 47\%. In 23 technically feasible assessments, PD\(_{outflow}\)/PD\(_{inflow}\) increased by 65\% (p < 0.001) and AUC\(_{outflow}\)/AUC\(_{inflow}\) increased by 85\% (p < 0.001). The time to peak density values in the outflow ROI accelerated only minimally without reaching statistical significance. Age, BMI, target vessel (celiac trunk, SMA or IMA), stenosis location (ostial or truncal), calcification severity, plaque composition or the presence of a complex stenosis did not reach statistical significance in their distribution among the feasible and non-feasible group (p > 0.05). Conclusions Compared to other vascular territories and indications, the feasibility of 2D-PA in mesenteric revascularization for CMI was limited. Unfavorable anatomic conditions contributed to a high rate of inconclusive 2D-PA results.}, language = {en} } @article{GerhardHartmannGoergenBroeckelmannetal.2022, author = {Gerhard-Hartmann, Elena and Goergen, Helen and Br{\"o}ckelmann, Paul J. and Mottok, Anja and Steinm{\"u}ller, Tabea and Grund, Johanna and Zam{\`o}, Alberto and Ben-Neriah, Susana and Sasse, Stephanie and Borchmann, Sven and Fuchs, Michael and Borchmann, Peter and Reinke, Sarah and Engert, Andreas and Veldman, Johanna and Diepstra, Arjan and Klapper, Wolfram and Rosenwald, Andreas}, title = {9p24.1 alterations and programmed cell death 1 ligand 1 expression in early stage unfavourable classical Hodgkin lymphoma: an analysis from the German Hodgkin Study Group NIVAHL trial}, series = {British Journal of Haematology}, volume = {196}, journal = {British Journal of Haematology}, number = {1}, doi = {10.1111/bjh.17793}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-258358}, pages = {116-126}, year = {2022}, abstract = {High programmed cell death 1 ligand 1 (PD-L1) protein expression and copy number alterations (CNAs) of the corresponding genomic locus 9p24.1 in Hodgkin- and Reed-Sternberg cells (HRSC) have been shown to be associated with favourable response to anti-PD-1 checkpoint inhibition in relapsed/refractory (r/r) classical Hodgkin lymphoma (cHL). In the present study, we investigated baseline 9p24.1 status as well as PD-L1 and major histocompatibility complex (MHC) class I and II protein expression in 82 biopsies from patients with early stage unfavourable cHL treated with anti-PD-1-based first-line treatment in the German Hodgkin Study Group (GHSG) NIVAHL trial (ClinicalTrials.gov Identifier: NCT03004833). All evaluated specimens showed 9p24.1 CNA in HRSC to some extent, but with high intratumoral heterogeneity and an overall smaller range of alterations than reported in advanced-stage or r/r cHL. All but two cases (97\%) showed PD-L1 expression by the tumour cells in variable amounts. While MHC-I was rarely expressed in >50\% of HRSC, MHC-II expression in >50\% of HRSC was found more frequently. No obvious impact of 9p24.1 CNA or PD-L1 and MHC-I/II expression on early response to the highly effective anti-PD-1-based NIVAHL first-line treatment was observed. Further studies evaluating an expanded panel of potential biomarkers are needed to optimally stratify anti-PD-1 first-line cHL treatment.}, language = {en} } @phdthesis{Ferretti2022, author = {Ferretti, Pamela}, title = {\(Clostridioides\) \(difficile\) beyond the disease-centred perspective: Beneficial properties in healthy infants and over-diagnosis in diseased adults identified by species- and SNV-based metagenomic analysis}, doi = {10.25972/OPUS-25417}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-254170}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2022}, abstract = {Clostridioides difficile is a bacterial species well known for its ability to cause C. difficile infection (also known as CDI). The investigation of the role of this species in the human gut has been so far dominated by a disease-centred perspective, focused on studying C. difficile in relation to its associated disease. In this context, the first aim of this thesis was to combine publicly available metagenomic data to analyse the microbial composition of stool samples from patients diagnosed with CDI, with a particular focus on identifying a CDI-specific microbial signature. However, similarly to many other bacterial species inhabiting the human gut, C. difficile association with disease is not valid in absolute terms, as C. difficile can be found also among healthy subjects. Further aims of this thesis were to 1) identify potential C. difficile reservoirs by screening a wide range of habitats, hosts, body sites and age groups, and characterize the biotic context associated with C. difficile presence, and 2) investigate C. difficile within-species diversity and its toxigenic potential across different age groups. The first part of the thesis starts with the description of the concepts and definitions used to identify bacterial species and within-species diversity, and then proceeds to provide an overview of the bacterial species at the centre of my investigation, C. difficile. The first Chapter includes a detailed description of the discovery, biology and physiology of this clinically relevant species, followed by an overview of the diagnostic protocols used in the clinical setting to diagnose CDI. The second part of the thesis describes the methodology used to investigate the questions mentioned above, while the third part presents the results of such investigative effort. I first show that C. difficile could be found in only a fraction of the CDI samples and that simultaneous colonization of multiple enteropathogenic species able to cause CDI-like clinical manifestations is more common than previously thought, raising concerns about CDI overdiagnosis. I then show that the CDIassociated gut microbiome is characterized by a specific microbial signature, distinguishable from the community composition associated with non-CDI diarrhea. Beyond the nosocomial and CDI context, I show that while rarely found in adults, C. difficile is a common member of the infant gut microbiome, where its presence is associated with multiple indicators typical of a desirable healthy microbiome development. In addition, I describe C. difficile extensive carriage among asymptomatic subjects, of all age groups and a potentially novel clade of C. difficile identified exclusively among infants. Finally, I discuss the limitations, challenges and future perspectives of my investigation.}, language = {en} } @article{KieselBeyersKaliszetal.2022, author = {Kiesel, Matthias and Beyers, Inga and Kalisz, Adam and Joukhadar, Ralf and W{\"o}ckel, Achim and Herbert, Saskia-Laureen and Curtaz, Carolin and Wulff, Christine}, title = {A 3D printed model of the female pelvis for practical education of gynecological pelvic examination}, series = {3D Printing in Medicine}, volume = {8}, journal = {3D Printing in Medicine}, doi = {10.1186/s41205-022-00139-7}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-313347}, year = {2022}, abstract = {Background Pelvic palpation is a core component of every Gynecologic examination. It requires vigorous training, which is difficult due to its intimate nature, leading to a need of simulation. Up until now, there are mainly models available for mere palpation which do not offer adequate visualization of the concerning anatomical structures. In this study we present a 3D printed model of the female pelvis. It can improve both the practical teaching of gynecological pelvic examination for health care professionals and the spatial understanding of the relevant anatomy. Methods We developed a virtual, simplified model showing selected parts of the female pelvis. 3D printing was used to create a physical model. Results The life-size 3D printed model has the ability of being physically assembled step by step by its users. Consequently, it improves teaching especially when combining it with commercial phantoms, which are built solely for palpation training. This is achieved by correlating haptic and visual sensations with the resulting feedback received. Conclusion The presented 3D printed model of the female pelvis can be of aid for visualizing and teaching pelvic anatomy and examination to medical staff. 3D printing provides the possibility of creating, multiplying, adapting and sharing such data worldwide with little investment of resources. Thus, an important contribution to the international medical community can be made for training this challenging examination.}, language = {en} } @article{SchmidtAltDeoghareetal.2022, author = {Schmidt, Sven and Alt, Yvonne and Deoghare, Nikita and Kr{\"u}ger, Sarah and Kern, Anna and Rockel, Anna Frederike and Wagner, Nicole and Erg{\"u}n, S{\"u}leyman and W{\"o}rsd{\"o}rfer, Philipp}, title = {A blood vessel organoid model recapitulating aspects of vasculogenesis, angiogenesis and vessel wall maturation}, series = {Organoids}, volume = {1}, journal = {Organoids}, number = {1}, issn = {2674-1172}, doi = {10.3390/organoids1010005}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-284043}, pages = {41 -- 53}, year = {2022}, abstract = {Blood vessel organoids are an important in vitro model to understand the underlying mechanisms of human blood vessel development and for toxicity testing or high throughput drug screening. Here we present a novel, cost-effective, and easy to manufacture vascular organoid model. To engineer the organoids, a defined number of human induced pluripotent stem cells are seeded in non-adhesive agarose coated wells of a 96-well plate and directed towards a lateral plate mesoderm fate by activation of Wnt and BMP4 signaling. We observe the formation of a circular layer of angioblasts around days 5-6. Induced by VEGF application, CD31\(^+\) vascular endothelial cells appear within this vasculogenic zone at approximately day 7 of organoid culture. These cells arrange to form a primitive vascular plexus from which angiogenic sprouting is observed after 10 days of culture. The differentiation outcome is highly reproducible, and the size of organoids is scalable depending on the number of starting cells. We observe that the initial vascular ring forms at the interface between two cell populations. The inner cellular compartment can be distinguished from the outer by the expression of GATA6, a marker of lateral plate mesoderm. Finally, 14-days-old organoids were transplanted on the chorioallantois membrane of chicken embryos resulting in a functional connection of the human vascular network to the chicken circulation. Perfusion of the vessels leads to vessel wall maturation and remodeling as indicated by the formation of a continuous layer of smooth muscle actin expressing cells enwrapping the endothelium. In summary, our organoid model recapitulates human vasculogenesis, angiogenesis as well as vessel wall maturation and therefore represents an easy and cost-effective tool to study all steps of blood vessel development and maturation directly in the human setting without animal experimentation.}, language = {en} } @incollection{Kumar2022, author = {Kumar, Dinesh}, title = {A Brief Historical and Present Perspective of ELT in India}, series = {Studies in Modern English}, booktitle = {Studies in Modern English}, editor = {Lazebna, Nataliia and Kumar, Dinesh}, publisher = {W{\"u}rzburg University Press}, address = {W{\"u}rzburg}, doi = {10.25972/WUP-978-3-95826-199-0-11}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-296434}, publisher = {W{\"u}rzburg University Press}, pages = {11-17}, year = {2022}, abstract = {English language is being taught as a second foreign language in India. For most of the learners in India, English still a foreign language or target language. The study of this language is important to fulfill different kinds of academic and professional requirements. Still, there is a big gulf between demand and supply for which the failure of the system is largely responsible as its main emphasis on to adherence to the foreign curriculum. The government tries to impose this curriculum on English teachers, but, in fact, the curriculum is outdated.}, language = {en} } @article{LorenzMusacchioKunstmannetal.2022, author = {Lorenz, Delia and Musacchio, Thomas and Kunstmann, Erdmute and Grauer, Eva and Pluta, Natalie and Stock, Annika and Speer, Christian P. and Hebestreit, Helge}, title = {A case report of Sanfilippo syndrome - the long way to diagnosis}, series = {BMC Neurology}, volume = {22}, journal = {BMC Neurology}, number = {1}, doi = {10.1186/s12883-022-02611-7}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-300465}, year = {2022}, abstract = {Background Mucopolysaccharidosis type III (Sanfilippo syndrome) is a lysosomal storage disorder, caused by a deficiency in the heparan-N-sulfatase enzyme involved in the catabolism of the glycosaminoglycan heparan sulfate. It is characterized by early nonspecific neuropsychiatric symptoms, followed by progressive neurocognitive impairment in combination with only mild somatic features. In this patient group with a broad clinical spectrum a significant genotype-phenotype correlation with some mutations leading to a slower progressive, attenuated course has been demonstrated. Case presentation Our patient had complications in the neonatal period and was diagnosed with Mucopolysaccharidosis IIIa only at the age of 28 years. He was compound heterozygous for the variants p.R245H and p.S298P, the latter having been shown to lead to a significantly milder phenotype. Conclusions The diagnostic delay is even more prolonged in this patient population with comorbidities and a slowly progressive course of the disease.}, language = {en} } @incollection{Ali2022, author = {Ali, Zuraina}, title = {A Case Study of the Basic Learners' Struggles in Guessing from Context to Retain Words Learned}, series = {Studies in Modern English}, booktitle = {Studies in Modern English}, editor = {Lazebna, Nataliia and Kumar, Dinesh}, publisher = {W{\"u}rzburg University Press}, address = {W{\"u}rzburg}, doi = {10.25972/WUP-978-3-95826-199-0-117}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-296529}, publisher = {W{\"u}rzburg University Press}, pages = {117-124}, year = {2022}, abstract = {Guessing meaning from context is a challenging strategy for Second Language Learners (SLLs). In using the strategy, research found that poor students or low proficiency learners struggled in their attempts to use it. Mainly, it was reported that it was due to their vocabulary knowledge was limited. In another aspect, retaining vocabulary learnt is also important. Such is essential since learning vocabulary does not mean knowing the definition only. Yet, learners must also be able to use the vocabulary as they engage in language skills such as reading, writing, speaking and listening. The study aims at finding the hindrances faced among poor students' using contextual clues in retaining vocabulary. The study employed a case study to collect data from two basic students studying at a tertiary level. The study found that their hindrances in guessing meaning contexts were due to their being confused in guessing meaning when reading a sentence. Also, it was found that they were not able to find clues since they lacked vocabulary to guess correctly. The study implied that guessing meaning from context required sizeable vocabulary knowledge. Therefore, more training is necessary to assist basic learners in being successful in guessing from contexts.}, language = {en} } @article{WhiteSpringerWiseetal.2022, author = {White, P. Lewis and Springer, Jan and Wise, Matt P. and Einsele, Hermann and L{\"o}ffler, Claudia and Seif, Michelle and Prommersberger, Sabrina and Backx, Matthijs and L{\"o}ffler, J{\"u}rgen}, title = {A clinical case of COVID-19-associated pulmonary aspergillosis (CAPA), illustrating the challenges in diagnosis (despite overwhelming mycological evidence)}, series = {Journal of Fungi}, volume = {8}, journal = {Journal of Fungi}, number = {1}, issn = {2309-608X}, doi = {10.3390/jof8010081}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-302438}, year = {2022}, abstract = {The COVID-19 pandemic has resulted in large numbers of patients requiring critical care management. With the established association between severe respiratory virus infection and invasive pulmonary aspergillosis (7.6\% for COVID-19-associated pulmonary aspergillosis (CAPA)), the pandemic places a significant number of patients at potential risk from secondary invasive fungal disease. We described a case of CAPA with substantial supporting mycological evidence, highlighting the need to employ strategic diagnostic algorithms and weighted definitions to improve the accuracy in diagnosing CAPA.}, language = {en} } @article{UhlerHaaseHoffmannetal.2022, author = {Uhler, Johannes and Haase, Peter and Hoffmann, Lara and Hothorn, Torsten and Schmidl, J{\"u}rgen and Stoll, Stefan and Welti, Ellen A. R. and Buse, J{\"o}rn and M{\"u}ller, J{\"o}rg}, title = {A comparison of different Malaise trap types}, series = {Insect Conservation and Diversity}, volume = {15}, journal = {Insect Conservation and Diversity}, number = {6}, doi = {10.1111/icad.12604}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-293694}, pages = {666 -- 672}, year = {2022}, abstract = {Recent reports on insect decline have highlighted the need for long-term data on insect communities towards identifying their trends and drivers. With the launch of many new insect monitoring schemes to investigate insect communities over large spatial and temporal scales, Malaise traps have become one of the most important tools due to the broad spectrum of species collected and reduced capture bias through passive sampling of insects day and night. However, Malaise traps can vary in size, shape, and colour, and it is unknown how these differences affect biomass, species richness, and composition of trap catch, making it difficult to compare results between studies. We compared five Malaise trap types (three variations of the Townes and two variations of the Bartak Malaise trap) to determine their effects on biomass and species richness as identified by metabarcoding. Insect biomass varied by 20\%-55\%, not strictly following trap size but varying with trap type. Total species richness was 20\%-38\% higher in the three Townes trap models compared to the Bartak traps. Bartak traps captured lower richness of highly mobile taxa but increased richness of ground-dwelling taxa. The white roofed Townes trap captured a higher richness of pollinators. We find that biomass, total richness, and taxa group specific richness are all sensitive to Malaise trap type. Trap type should be carefully considered and aligned to match monitoring and research questions. Additionally, our estimates of trap type effects can be used to adjust results to facilitate comparisons across studies.}, language = {en} } @article{KarakStepanenkoAddicoatetal.2022, author = {Karak, Suvendu and Stepanenko, Vladimir and Addicoat, Matthew A. and Keßler, Philipp and Moser, Simon and Beuerle, Florian and W{\"u}rthner, Frank}, title = {A Covalent Organic Framework for Cooperative Water Oxidation}, series = {Journal of the American Chemical Society}, volume = {144}, journal = {Journal of the American Chemical Society}, number = {38}, issn = {0002-7863}, doi = {10.1021/jacs.2c07282}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-287591}, pages = {17661-17670}, year = {2022}, abstract = {The future of water-derived hydrogen as the "sustainable energy source" straightaway bets on the success of the sluggish oxygen-generating half-reaction. The endeavor to emulate the natural photosystem II for efficient water oxidation has been extended across the spectrum of organic and inorganic combinations. However, the achievement has so far been restricted to homogeneous catalysts rather than their pristine heterogeneous forms. The poor structural understanding and control over the mechanistic pathway often impede the overall development. Herein, we have synthesized a highly crystalline covalent organic framework (COF) for chemical and photochemical water oxidation. The interpenetrated structure assures the catalyst stability, as the catalyst's performance remains unaltered after several cycles. This COF exhibits the highest ever accomplished catalytic activity for such an organometallic crystalline solid-state material where the rate of oxygen evolution is as high as ∼26,000 μmol L\(^{-1}\) s\(^{-1}\) (second-order rate constant k ≈ 1650 μmol L s\(^{-1}\) g\(^{-2}\)). The catalyst also proves its exceptional activity (k ≈ 1600 μmol L s\(^{-1}\) g\(^{-2}\)) during light-driven water oxidation under very dilute conditions. The cooperative interaction between metal centers in the crystalline network offers 20-30-fold superior activity during chemical as well as photocatalytic water oxidation as compared to its amorphous polymeric counterpart.}, language = {en} } @article{WechAnkenbrandBleyetal.2022, author = {Wech, Tobias and Ankenbrand, Markus Johannes and Bley, Thorsten Alexander and Heidenreich, Julius Frederik}, title = {A data-driven semantic segmentation model for direct cardiac functional analysis based on undersampled radial MR cine series}, series = {Magnetic Resonance in Medicine}, volume = {87}, journal = {Magnetic Resonance in Medicine}, number = {2}, doi = {10.1002/mrm.29017}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-257616}, pages = {972-983}, year = {2022}, abstract = {Purpose Image acquisition and subsequent manual analysis of cardiac cine MRI is time-consuming. The purpose of this study was to train and evaluate a 3D artificial neural network for semantic segmentation of radially undersampled cardiac MRI to accelerate both scan time and postprocessing. Methods A database of Cartesian short-axis MR images of the heart (148,500 images, 484 examinations) was assembled from an openly accessible database and radial undersampling was simulated. A 3D U-Net architecture was pretrained for segmentation of undersampled spatiotemporal cine MRI. Transfer learning was then performed using samples from a second database, comprising 108 non-Cartesian radial cine series of the midventricular myocardium to optimize the performance for authentic data. The performance was evaluated for different levels of undersampling by the Dice similarity coefficient (DSC) with respect to reference labels, as well as by deriving ventricular volumes and myocardial masses. Results Without transfer learning, the pretrained model performed moderately on true radial data [maximum number of projections tested, P = 196; DSC = 0.87 (left ventricle), DSC = 0.76 (myocardium), and DSC =0.64 (right ventricle)]. After transfer learning with authentic data, the predictions achieved human level even for high undersampling rates (P = 33, DSC = 0.95, 0.87, and 0.93) without significant difference compared with segmentations derived from fully sampled data. Conclusion A 3D U-Net architecture can be used for semantic segmentation of radially undersampled cine acquisitions, achieving a performance comparable with human experts in fully sampled data. This approach can jointly accelerate time-consuming cine image acquisition and cumbersome manual image analysis.}, language = {en} } @article{SivarajanOberwinklerRolletal.2022, author = {Sivarajan, Rinu and Oberwinkler, Heike and Roll, Valeria and K{\"o}nig, Eva-Maria and Steinke, Maria and Bodem, Jochen}, title = {A defined anthocyanin mixture sourced from bilberry and black currant inhibits Measles virus and various herpesviruses}, series = {BMC Complementary Medicine and Therapies}, volume = {22}, journal = {BMC Complementary Medicine and Therapies}, doi = {10.1186/s12906-022-03661-7}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301423}, year = {2022}, abstract = {Background Anthocyanin-containing plant extracts and carotenoids, such as astaxanthin, have been well-known for their antiviral and anti-inflammatory activity, respectively. We hypothesised that a mixture of Ribes nigrum L. (Grossulariaceae) (common name black currant (BC)) and Vaccinium myrtillus L. (Ericaceae) (common name bilberry (BL)) extracts (BC/BL) with standardised anthocyanin content as well as single plant extracts interfered with the replication of Measles virus and Herpesviruses in vitro. Methods We treated cell cultures with BC/BL or defined single plant extracts, purified anthocyanins and astaxanthin in different concentrations and subsequently infected the cultures with the Measles virus (wild-type or vaccine strain Edmonston), Herpesvirus 1 or 8, or murine Cytomegalovirus. Then, we analysed the number of infected cells and viral infectivity and compared the data to non-treated controls. Results The BC/BL extract inhibited wild-type Measles virus replication, syncytia formation and cell-to-cell spread. This suppression was dependent on the wild-type virus-receptor-interaction since the Measles vaccine strain was unaffected by BC/BL treatment. Furthermore, the evidence was provided that the delphinidin-3-rutinoside chloride, a component of BC/BL, and purified astaxanthin, were effective anti-Measles virus compounds. Human Herpesvirus 1 and murine Cytomegalovirus replication was inhibited by BC/BL, single bilberry or black currant extracts, and the BC/BL component delphinidin-3-glucoside chloride. Additionally, we observed that BC/BL seemed to act synergistically with aciclovir. Moreover, BC/BL, the single bilberry and black currant extracts, and the BC/BL components delphinidin-3-glucoside chloride, cyanidin-3-glucoside, delphinidin-3-rutinoside chloride, and petunidin-3-galactoside inhibited human Herpesvirus 8 replication. Conclusions Our data indicate that Measles viruses and Herpesviruses are differentially susceptible to a specific BC/BL mixture, single plant extracts, purified anthocyanins and astaxanthin. These compounds might be used in the prevention of viral diseases and in addition to direct-acting antivirals, such as aciclovir.}, language = {en} } @article{WongPittig2022, author = {Wong, Alex H. K. and Pittig, Andre}, title = {A dimensional measure of safety behavior: A non-dichotomous assessment of costly avoidance in human fear conditioning}, series = {Psychological Research}, volume = {86}, journal = {Psychological Research}, number = {1}, issn = {1430-2772}, doi = {10.1007/s00426-021-01490-w}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-267688}, pages = {312-330}, year = {2022}, abstract = {Safety behavior prevents the occurrence of threat, thus it is typically considered adaptive. However, safety behavior in anxiety-related disorders is often costly, and persists even the situation does not entail realistic threat. Individuals can engage in safety behavior to varying extents, however, these behaviors are typically measured dichotomously (i.e., to execute or not). To better understand the nuances of safety behavior, this study developed a dimensional measure of safety behavior that had a negative linear relationship with the admission of an aversive outcome. In two experiments, a Reward group receiving fixed or individually calibrated incentives competing with safety behavior showed reduced safety behavior than a Control group receiving no incentives. This allowed extinction learning to a previously learnt warning signal in the Reward group (i.e., updating the belief that this stimulus no longer signals threat). Despite the Reward group exhibited extinction learning, both groups showed a similar increase in fear to the warning signal once safety behavior was no longer available. This null group difference was due to some participants in the Reward group not incentivized enough to disengage from safety behavior. Dimensional assessment revealed a dissociation between low fear but substantial safety behavior to a safety signal in the Control group. This suggests that low-cost safety behavior does not accurately reflect the fear-driven processes, but also other non-fear-driven processes, such as cost (i.e., engage in safety behavior merely because it bears little to no cost). Pinpointing both processes is important for furthering the understanding of safety behavior.}, language = {en} } @article{ThonfeldGessnerHolzwarthetal.2022, author = {Thonfeld, Frank and Gessner, Ursula and Holzwarth, Stefanie and Kriese, Jennifer and da Ponte, Emmanuel and Huth, Juliane and Kuenzer, Claudia}, title = {A first assessment of canopy cover loss in Germany's forests after the 2018-2020 drought years}, series = {Remote Sensing}, volume = {14}, journal = {Remote Sensing}, number = {3}, issn = {2072-4292}, doi = {10.3390/rs14030562}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-255306}, year = {2022}, abstract = {Central Europe was hit by several unusually strong periods of drought and heat between 2018 and 2020. These droughts affected forest ecosystems. Cascading effects with bark beetle infestations in spruce stands were fatal to vast forest areas in Germany. We present the first assessment of canopy cover loss in Germany for the period of January 2018-April 2021. Our approach makes use of dense Sentinel-2 and Landsat-8 time-series data. We computed the disturbance index (DI) from the tasseled cap components brightness, greenness, and wetness. Using quantiles, we generated monthly DI composites and calculated anomalies in a reference period (2017). From the resulting map, we calculated the canopy cover loss statistics for administrative entities. Our results show a canopy cover loss of 501,000 ha for Germany, with large regional differences. The losses were largest in central Germany and reached up to two-thirds of coniferous forest loss in some districts. Our map has high spatial (10 m) and temporal (monthly) resolution and can be updated at any time.}, language = {en} } @article{UereyenBachoferKuenzer2022, author = {Uereyen, Soner and Bachofer, Felix and Kuenzer, Claudia}, title = {A framework for multivariate analysis of land surface dynamics and driving variables — a case study for Indo-Gangetic river basins}, series = {Remote Sensing}, volume = {14}, journal = {Remote Sensing}, number = {1}, issn = {2072-4292}, doi = {10.3390/rs14010197}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-255295}, year = {2022}, abstract = {The analysis of the Earth system and interactions among its spheres is increasingly important to improve the understanding of global environmental change. In this regard, Earth observation (EO) is a valuable tool for monitoring of long term changes over the land surface and its features. Although investigations commonly study environmental change by means of a single EO-based land surface variable, a joint exploitation of multivariate land surface variables covering several spheres is still rarely performed. In this regard, we present a novel methodological framework for both, the automated processing of multisource time series to generate a unified multivariate feature space, as well as the application of statistical time series analysis techniques to quantify land surface change and driving variables. In particular, we unify multivariate time series over the last two decades including vegetation greenness, surface water area, snow cover area, and climatic, as well as hydrological variables. Furthermore, the statistical time series analyses include quantification of trends, changes in seasonality, and evaluation of drivers using the recently proposed causal discovery algorithm Peter and Clark Momentary Conditional Independence (PCMCI). We demonstrate the functionality of our methodological framework using Indo-Gangetic river basins in South Asia as a case study. The time series analyses reveal increasing trends in vegetation greenness being largely dependent on water availability, decreasing trends in snow cover area being mostly negatively coupled to temperature, and trends of surface water area to be spatially heterogeneous and linked to various driving variables. Overall, the obtained results highlight the value and suitability of this methodological framework with respect to global climate change research, enabling multivariate time series preparation, derivation of detailed information on significant trends and seasonality, as well as detection of causal links with minimal user intervention. This study is the first to use multivariate time series including several EO-based variables to analyze land surface dynamics over the last two decades using the causal discovery algorithm PCMCI.}, language = {en} }