@article{DietzHasseFerrarisetal.2013,
  author    = {Dietz, Mariana S. and Hasse, Daniel and Ferraris, Davide M. and G{\"o}hler, Antonia and Niemann, Hartmut H. and Heilemann, Mike},
  title     = {Single-molecule photobleaching reveals increased MET receptor dimerization upon ligand binding in intact cells},
  series = {BMC Biophysics},
  volume    = {6},
  journal   = {BMC Biophysics},
  number    = {6},
  issn      = {2046-1682},
  doi       = {10.1186/2046-1682-6-6},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-121835},
  year      = {2013},
  abstract  = {Background: The human receptor tyrosine kinase MET and its ligand hepatocyte growth factor/scatter factor are essential during embryonic development and play an important role during cancer metastasis and tissue regeneration. In addition, it was found that MET is also relevant for infectious diseases and is the target of different bacteria, amongst them Listeria monocytogenes that induces bacterial uptake through the surface protein internalin B. Binding of ligand to the MET receptor is proposed to lead to receptor dimerization. However, it is also discussed whether preformed MET dimers exist on the cell membrane. Results: To address these issues we used single-molecule fluorescence microscopy techniques. Our photobleaching experiments show that MET exists in dimers on the membrane of cells in the absence of ligand and that the proportion of MET dimers increases significantly upon ligand binding. Conclusions: Our results indicate that partially preformed MET dimers may play a role in ligand binding or MET signaling. The addition of the bacterial ligand internalin B leads to an increase of MET dimers which is in agreement with the model of ligand-induced dimerization of receptor tyrosine kinases.},
  language  = {en}
}
@article{GershbergFennelRehmetal.2016,
  author    = {Gershberg, Jana and Fennel, Franziska and Rehm, Thomas H. and Lochbrunner, Stefan and W{\"u}rthner, Frank},
  title     = {Anti-cooperative supramolecular polymerization: a new K\(_2\)-K model applied to the self-assembly of perylene bisimide dye proceeding via well-defined hydrogen-bonded dimers},
  series = {Chemical Science},
  volume    = {7},
  journal   = {Chemical Science},
  number    = {3},
  doi       = {10.1039/c5sc03759j},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-191428},
  pages     = {1729-1737},
  year      = {2016},
  abstract  = {A perylene bisimide dye bearing amide functionalities at the imide positions derived from amino acid L-alanine and a dialkoxy-substituted benzyl amine self-assembles into tightly bound dimers by π-π-stacking and hydrogen bonding in chloroform. In less polar or unpolar solvents like toluene and methylcyclohexane, and in their mixtures, these dimers further self-assemble into extended oligomeric aggregates in an anti-cooperative process in which even numbered aggregates are highly favoured. The stepwise transition from dimers into oligomers can not be properly described by conventional K\(_2\)-K model, and thus a new K\(_2\)-K aggregation model has been developed, which interpretes the present anti-cooperative supramolecular polymerization more appropriately. The newly developed K\(_2\)-K model will be useful to describe self-assembly processes of a plethora of other π-conjugated molecules that are characterized by a favored dimer species.},
  language  = {en}
}
@article{RiesLiessFeileretal.2020,
  author    = {Ries, Lena K. and Liess, Anna K. L. and Feiler, Christian G. and Spratt, Donald E. and Lowe, Edward D. and Lorenz, Sonja},
  title     = {Crystal structure of the catalytic C-lobe of the HECT-type ubiquitin ligase E6AP},
  series = {Protein Science},
  volume    = {29},
  journal   = {Protein Science},
  number    = {6},
  doi       = {10.1002/pro.3832},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-214812},
  pages     = {1550 -- 1554},
  year      = {2020},
  abstract  = {The HECT-type ubiquitin ligase E6AP (UBE3A) is critically involved in several neurodevelopmental disorders and human papilloma virus-induced cervical tumorigenesis; the structural mechanisms underlying the activity of this crucial ligase, however, are incompletely understood. Here, we report a crystal structure of the C-terminal lobe ("C-lobe") of the catalytic domain of E6AP that reveals two molecules in a domain-swapped, dimeric arrangement. Interestingly, the molecular hinge that enables this structural reorganization with respect to the monomeric fold coincides with the active-site region. While such dimerization is unlikely to occur in the context of full-length E6AP, we noticed a similar domain swap in a crystal structure of the isolated C-lobe of another HECT-type ubiquitin ligase, HERC6. This may point to conformational strain in the active-site region of HECT-type ligases with possible implications for catalysis. Significance Statement The HECT-type ubiquitin ligase E6AP has key roles in human papilloma virus-induced cervical tumorigenesis and certain neurodevelopmental disorders. Here, we present a crystal structure of the C-terminal, catalytic lobe of E6AP, providing basic insight into the conformational properties of this functionally critical region of HECT-type ligases.},
  language  = {en}
}