@article{HopfmannAlbertSchneideretal.2013, author = {Hopfmann, C. and Albert, F. and Schneider, C. and H{\"o}fling, S. and Kamp, M. and Forchel, A. and Kanter, I. and Reizenstein, S.}, title = {Nonlinear emission characteristics of quantum dot-micropillar lasers in the presence of polarized optical feedback}, series = {New Journal of Physics}, volume = {15}, journal = {New Journal of Physics}, number = {025030}, issn = {1367-2630}, doi = {10.1088/1367-2630/15/2/025030}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-123127}, year = {2013}, abstract = {We report on electrically pumped quantum dot-microlasers in the presence of polarized self-feedback. The high-\(\beta\) microlasers show two orthogonal, linearly polarized emission modes which are coupled via the common gain medium. This coupling is explained in terms of gain competition between the two lasing modes and leads to distinct differences in their input-output characteristics. By applying polarized self-feedback via an external mirror, we are able to control the laser characteristics of the emission modes in terms of the output power, the coherence time and the photon statistics. We find that linearly polarized self-feedback stabilizes the lasing of a given mode, while cross-polarized feedback between the two modes reduces strongly the intensity of the other emission mode showing particular high-intensity fluctuations and even super-thermal values of the photon autocorrelation function \(g^{(2)} (\tau)\) at zero delay. Measurements of \(g^{(2)} (\tau)\) under external feedback also allow us to detect revival peaks associated with the round trip time of the external cavity. Analyzing the damping and shape of the \(g^{(2)} (\tau)\) revival peaks by a phenomenological model provides us insight into the underlying physics such as the effective exciton lifetime and gain characteristics of the quantum dots in the active region of these microlasers.}, language = {en} } @article{ZhaoZhangBhuripanyoetal.2013, author = {Zhao, Bo and Zhang, Keya and Bhuripanyo, Karan and Choi, Chan Hee J. and Villhauer, Eric B. and Li, Heng and Zheng, Ning and Kiyokawa, Hiroaki and Schindelin, Hermann and Yin, Jun}, title = {Profiling the Cross Reactivity of Ubiquitin with the Nedd8 Activating Enzyme by Phage Display}, series = {PLoS ONE}, volume = {8}, journal = {PLoS ONE}, number = {e70312}, issn = {1932-6203}, doi = {10.1371/journal.pone.0070312}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-128479}, year = {2013}, abstract = {The C-terminal peptides of ubiquitin (UB) and UB-like proteins (UBLs) play a key role in their recognition by the specific activating enzymes (E1s) to launch their transfer through the respective enzymatic cascades thus modifying cellular proteins. UB and Nedd8, a UBL regulating the activity of cullin-RING UB ligases, only differ by one residue at their C-termini; yet each has its specific E1 for the activation reaction. It has been reported recently that UAE can cross react with Nedd8 to enable its passage through the UB transfer cascade for protein neddylation. To elucidate differences in UB recognition by UAE and NAE, we carried out phage selection of a UB library with randomized C-terminal sequences based on the catalytic formation of UB similar to NAE thioester conjugates. Our results confirmed the previous finding that residue 72 of UB plays a "gate-keeping" role in E1 selectivity. We also found that diverse sequences flanking residue 72 at the UB C-terminus can be accommodated by NAE for activation. Furthermore heptameric peptides derived from the C-terminal sequences of UB variants selected for NAE activation can function as mimics of Nedd8 to form thioester conjugates with NAE and the downstream E2 enzyme Ubc12 in the Nedd8 transfer cascade. Once the peptides are charged onto the cascade enzymes, the full-length Nedd8 protein is effectively blocked from passing through the cascade for the critical modification of cullin. We have thus identified a new class of inhibitors of protein neddylation based on the profiles of the UB C-terminal sequences recognized by NAE.}, language = {en} } @article{KochCappelNockeretal.2013, author = {Koch, Oliver and Cappel, Daniel and Nocker, Monika and J{\"a}ger, Timo and Floh{\´e}, Leopold and Sotriffer, Christoph A. and Selzer, Paul M.}, title = {Molecular Dynamics Reveal Binding Mode of Glutathionylspermidine by Trypanothione Synthetase}, series = {PLoS ONE}, volume = {8}, journal = {PLoS ONE}, number = {2}, doi = {10.1371/journal.pone.0056788}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-131070}, pages = {e56788}, year = {2013}, abstract = {The trypanothione synthetase (TryS) catalyses the two-step biosynthesis of trypanothione from spermidine and glutathione and is an attractive new drug target for the development of trypanocidal and antileishmanial drugs, especially since the structural information of TryS from Leishmania major has become available. Unfortunately, the TryS structure was solved without any of the substrates and lacks loop regions that are mechanistically important. This contribution describes docking and molecular dynamics simulations that led to further insights into trypanothione biosynthesis and, in particular, explains the binding modes of substrates for the second catalytic step. The structural model essentially confirm previously proposed binding sites for glutathione, ATP and two \(Mg^{2+}\) ions, which appear identical for both catalytic steps. The analysis of an unsolved loop region near the proposed spermidine binding site revealed a new pocket that was demonstrated to bind glutathionylspermidine in an inverted orientation. For the second step of trypanothione synthesis glutathionylspermidine is bound in a way that preferentially allows \(N^1\)-glutathionylation of \(N^8\)-glutathionylspermidine, classifying \(N^8\)-glutathionylspermidine as the favoured substrate. By inhibitor docking, the binding site for \(N^8\)-glutathionylspermidine was characterised as druggable.}, language = {en} } @article{LiYanThomaleetal.2015, author = {Li, Gang and Yan, Binghai and Thomale, Ronny and Hanke, Werner}, title = {Topological nature and the multiple Dirac cones hidden in Bismuth high-Tc superconductors}, series = {Scientific Reports}, volume = {5}, journal = {Scientific Reports}, number = {10435}, doi = {10.1038/srep10435}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-148569}, year = {2015}, abstract = {Recent theoretical studies employing density-functional theory have predicted BaBiO\(_{3}\) (when doped with electrons) and YBiO\(_{3}\) to become a topological insulator (TI) with a large topological gap (~0.7 eV). This, together with the natural stability against surface oxidation, makes the Bismuth-Oxide family of special interest for possible applications in quantum information and spintronics. The central question, we study here, is whether the hole-doped Bismuth Oxides, i.e. Ba\(_{1-X}\)K\(_{X}\)BiO\(_{3}\) and BaPb\(_{1-X}\)Bi\(_{X}\)O\(_{3}\), which are "high-Tc" bulk superconducting near 30 K, additionally display in the further vicinity of their Fermi energy E\(_{F}\) a topological gap with a Dirac-type of topological surface state. Our electronic structure calculations predict the K-doped family to emerge as a TI, with a topological gap above E\(_{F}\). Thus, these compounds can become superconductors with hole-doping and potential TIs with additional electron doping. Furthermore, we predict the Bismuth-Oxide family to contain an additional Dirac cone below E\(_{F}\) for further hole doping, which manifests these systems to be candidates for both electron-and hole-doped topological insulators.}, language = {en} } @article{SchreweLillLiuetal.2015, author = {Schrewe, L. and Lill, C. M. and Liu, T. and Salmen, A. and Gerdes, L. A. and Guillot-Noel, L. and Akkad, D. A. and Blaschke, P. and Graetz, C. and Hoffjan, S. and Kroner, A. and Demir, S. and B{\"o}hme, A. and Rieckmann, P. and El Ali, A. and Hagemann, N. and Hermann, D. M. and Cournu-Rebeix, I. and Zipp, F. and K{\"u}mpfel, T. and Buttmann, M. and Zettl, U. K. and Fontaine, B. and Bertram, L. and Gold, R. and Chan, A.}, title = {Investigation of sex-specific effects of apolipoprotein E on severity of EAE and MS}, series = {Journal of Neuroinflammation}, volume = {12}, journal = {Journal of Neuroinflammation}, number = {234}, doi = {10.1186/s12974-015-0429-y}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-136252}, year = {2015}, abstract = {Background: Despite pleiotropic immunomodulatory effects of apolipoprotein E (apoE) in vitro, its effects on the clinical course of experimental autoimmune encephalomyelitis (EAE) and multiple sclerosis (MS) are still controversial. As sex hormones modify immunomodulatory apoE functions, they may explain contentious findings. This study aimed to investigate sex-specific effects of apoE on disease course of EAE and MS. Methods: MOG\(_{35-55}\) induced EAE in female and male apoE-deficient mice was assessed clinically and histopathologically. apoE expression was investigated by qPCR. The association of the MS severity score (MSSS) and APOE rs429358 and rs7412 was assessed across 3237 MS patients using linear regression analyses. Results: EAE disease course was slightly attenuated in male apoE-deficient (apoE\(^{-/-}\)) mice compared to wildtype mice (cumulative median score: apoE\(^{-/-}\) = 2 [IQR 0.0-4.5]; wildtype = 4 [IQR 1.0-5.0]; n = 10 each group, p = 0.0002). In contrast, EAE was more severe in female apoE\(^{-/-}\) mice compared to wildtype mice (cumulative median score: apoE\(^{-/-}\) = 3 [IQR 2.0-4.5]; wildtype = 3 [IQR 0.0-4.0]; n = 10, p = 0.003). In wildtype animals, apoE expression during the chronic EAE phase was increased in both females and males (in comparison to naive animals; p < 0.001). However, in MS, we did not observe a significant association between MSSS and rs429358 or rs7412, neither in the overall analyses nor upon stratification for sex. Conclusions: apoE exerts moderate sex-specific effects on EAE severity. However, the results in the apoE knock-out model are not comparable to effects of polymorphic variants in the human APOE gene, thus pinpointing the challenge of translating findings from the EAE model to the human disease.}, language = {en} } @phdthesis{Wojtkowiak2018, author = {Wojtkowiak, Harald}, title = {Planungssystem zur Steigerung der Autonomie von Kleinstsatelliten}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-163569}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2018}, abstract = {Der Betrieb von Satelliten wird sich in Zukunft gravierend {\"a}ndern. Die bisher ausge{\"u}bte konventionelle Vorgehensweise, bei der die Planung der vom Satelliten auszuf{\"u}hrenden Aktivit{\"a}ten sowie die Kontrolle hier{\"u}ber ausschließlich vom Boden aus erfolgen, st{\"o}ßt bei heutigen Anwendungen an ihre Grenzen. Im schlimmsten Fall verhindert dieser Umstand sogar die Erschließung bisher ungenutzter M{\"o}glichkeiten. Der Gewinn eines Satelliten, sei es in Form wissenschaftlicher Daten oder der Vermarktung satellitengest{\"u}tzter Dienste, wird daher nicht optimal ausgesch{\"o}pft. Die Ursache f{\"u}r dieses Problem l{\"a}sst sich im Grunde auf eine ausschlaggebende Tatsache zur{\"u}ckf{\"u}hren: Konventionelle Satelliten k{\"o}nnen ihr Verhalten, d.h. die Folge ihrer T{\"a}tigkeiten, nicht eigenst{\"a}ndig anpassen. Stattdessen erstellt das Bedienpersonal am Boden - vor allem die Operatoren - mit Hilfe von Planungssoftware feste Ablaufpl{\"a}ne, die dann in Form von Kommandosequenzen von den Bodenstationen aus an die jeweiligen Satelliten hochgeladen werden. Dort werden die Befehle lediglich {\"u}berpr{\"u}ft, interpretiert und strikt ausgef{\"u}hrt. Die Abarbeitung erfolgt linear. Situationsbedingte {\"A}nderungen, wie sie vergleichsweise bei der Codeausf{\"u}hrung von Softwareprogrammen durch Kontrollkonstrukte, zum Beispiel Schleifen und Verzweigungen, {\"u}blich sind, sind typischerweise nicht vorgesehen. Der Operator ist daher die einzige Instanz, die das Verhalten des Satelliten mittels Kommandierung, per Upload, beeinflussen kann, und auch nur dann, wenn ein direkter Funkkontakt zwischen Satellit und Bodenstation besteht. Die dadurch m{\"o}glichen Reaktionszeiten des Satelliten liegen bestenfalls bei einigen Sekunden, falls er sich im Wirkungsbereich der Bodenstation befindet. Außerhalb des Kontaktfensters kann sich die Zeitschranke, gegeben durch den Orbit und die aktuelle Position des Satelliten, von einigen Minuten bis hin zu einigen Stunden erstrecken. Die Signallaufzeiten der Funk{\"u}bertragung verl{\"a}ngern die Reaktionszeiten um weitere Sekunden im erdnahen Bereich. Im interplanetaren Raum erstrecken sich die Zeitspannen aufgrund der immensen Entfernungen sogar auf mehrere Minuten. Dadurch bedingt liegt die derzeit technologisch m{\"o}gliche, bodengest{\"u}tzte, Reaktionszeit von Satelliten bestenfalls im Bereich von einigen Sekunden. Diese Einschr{\"a}nkung stellt ein schweres Hindernis f{\"u}r neuartige Satellitenmissionen, bei denen insbesondere nichtdeterministische und kurzzeitige Ph{\"a}nomene (z.B. Blitze und Meteoreintritte in die Erdatmosph{\"a}re) Gegenstand der Beobachtungen sind, dar. Die langen Reaktionszeiten des konventionellen Satellitenbetriebs verhindern die Realisierung solcher Missionen, da die verz{\"o}gerte Reaktion erst erfolgt, nachdem das zu beobachtende Ereignis bereits abgeschlossen ist. Die vorliegende Dissertation zeigt eine M{\"o}glichkeit, das durch die langen Reaktionszeiten entstandene Problem zu l{\"o}sen, auf. Im Zentrum des L{\"o}sungsansatzes steht dabei die Autonomie. Im Wesentlichen geht es dabei darum, den Satelliten mit der F{\"a}higkeit auszustatten, sein Verhalten, d.h. die Folge seiner T{\"a}tigkeiten, eigenst{\"a}ndig zu bestimmen bzw. zu {\"a}ndern. Dadurch wird die direkte Abh{\"a}ngigkeit des Satelliten vom Operator bei Reaktionen aufgehoben. Im Grunde wird der Satellit in die Lage versetzt, sich selbst zu kommandieren. Die Idee der Autonomie wurde im Rahmen der zugrunde liegenden Forschungsarbeiten umgesetzt. Das Ergebnis ist ein autonomes Planungssystem. Dabei handelt es sich um ein Softwaresystem, mit dem sich autonomes Verhalten im Satelliten realisieren l{\"a}sst. Es kann an unterschiedliche Satellitenmissionen angepasst werden. Ferner deckt es verschiedene Aspekte des autonomen Satellitenbetriebs, angefangen bei der generellen Entscheidungsfindung der T{\"a}tigkeiten, {\"u}ber die zeitliche Ablaufplanung unter Einbeziehung von Randbedingungen (z.B. Ressourcen) bis hin zur eigentlichen Ausf{\"u}hrung, d.h. Kommandierung, ab. Das Planungssystem kommt als Anwendung in ASAP, einer autonomen Sensorplattform, zum Einsatz. Es ist ein optisches System und dient der Detektion von kurzzeitigen Ph{\"a}nomenen und Ereignissen in der Erdatmosph{\"a}re. Die Forschungsarbeiten an dem autonomen Planungssystem, an ASAP sowie an anderen zu diesen in Bezug stehenden Systemen wurden an der Professur f{\"u}r Raumfahrttechnik des Lehrstuhls Informatik VIII der Julius-Maximilians-Universit{\"a}t W{\"u}rzburg durchgef{\"u}hrt.}, subject = {Planungssystem}, language = {de} }