@article{WeberOsbornFrankeetal.1977, author = {Weber, Klaus and Osborn, Mary and Franke, Werner W. and Seib, Erinita and Scheer, Ulrich and Herth, Werner}, title = {Identification of microtubular structures in diverse plant and animal cells by immunological cross-reaction revealed in immunofluorescence microscopy using antibodies against tubulin from porcine brain}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-41383}, year = {1977}, abstract = {Antibody against tubulin from porcine brain was used to evaluate the immunological cross reactivity of tubulin from a variety of animal and plant cells. Indirect immunofluorescence microscopy revealed microtubule-containing structures including cytoplasmic microtubules, spindle microtubules, cilia and fIagella. Thus tubulin from diverse species of both mammals and plants show immunological cross-reactivity with tubulin from porcine brain. Results obtained by immunofluorescence microscopy are whenever possible compared with previously known ultrastructural results obtained by electron microscopy.}, subject = {Cytologie}, language = {en} } @phdthesis{Sandblad2007, author = {Sandblad, Linda}, title = {Seam Binding, a Novel Mechanism for Microtubule Stabilization}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-24714}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2007}, abstract = {Microtubules are a fascinating component of the cellular scaffold protein network, the cytoskeleton. These hollow tubular structures are assembled of laterally associated proto-filaments containing ab-tubulin heterodimers in a head to tail arrangement. Accordingly microtubules have a defined polarity, which sets the base for the polarity of the cell. The microtubule lattice can be arranged in two conformations: In the more abundant B-lattice conformation, where the protofilaments interact laterally through a- to a- and b- to b-tubulin contacts and in the less stable A-lattice conformation, where a-tubulin interacts laterally with b-tubulin. In cells the microtubules generally contain 13 protofilaments of which usually one pair interacts in the A-lattice conformation, forming the so-called lattice seam. Microtubule dynamics and interactions are strongly regulated by micro-tubule associate proteins (MAPs). Structural investigations on MAPs and microtubule associated motor proteins in complex with microtubules have become possible in combination with modern electron microscopy (EM) and image processing. We have used biochemistry and different advanced EM techniques to study the interaction between microtubules and the MAP Mal3p in vitro. Mal3p is the sole member of the end-binding protein 1 (EB1) protein family in the fission yeast Schizosaccharomyces pombe. Previous in vivo studies have shown that Mal3p promotes microtubule growth. Our studies with high-resolution unidirectional shadowing EM revealed that Mal3p interacts with the microtubule lattice in a novel way, using binding sites on the microtubule that are different from those reported for other MAPs or motor proteins. Full-length Mal3p preferentially binds between two protofilaments on the microtubule lattice, leaving the rest of the lattice free. A case where Mal3p was found in two adjacent protofilament, revealed an A-lattice conformation on the microtubules, surprisingly indicating specific binding of Mal3p to the microtubule seam. With a lattice enhancer, in form of a b-tubulin binding kinesin motor domain, it was demonstrated that Mal3p stabilizes the seam which is thought to be the weakest part of a microtubule. Further, the presence of Mal3p during microtubule polymerization enhances the closure of protofilament sheets into a tubular organization. Cryo-EM and 3-D helical reconstruction on a monomeric microtubule binding domain of Mal3p, confirm the localization in between the protofilament and result in an accurate localization on the microtubule lattice. The results also indicate Mal3p's capacity to influence the microtubule lattice conformation. Together, studies approached in vitro demonstrate that an EB1-family homolog not only interacts with the microtubule plus end, but also with the microtubule lattice. The structure of Mal3p interacting with microtubules reveals a new mechanism for microtubule stabilization and further insight on how plus end binding proteins are able promote microtubule growth. These findings further suggest that microtubules exhibit two distinct reaction platforms on their surface that can independently interact with selected MAPs or motors.}, subject = {Mikrotubulus}, language = {en} } @phdthesis{Wawrowsky2007, author = {Wawrowsky, Kolja Alexander}, title = {Analysis and Visualization in Multidimensional Microscopy}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-23867}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2007}, abstract = {The live sciences currently undergo a paradigm shift to computer aided discoveries. Discoveries in the live sciences were historically made by either direct observation or as a result of chemical assays. Today we see a growing shift toward computer aided analysis and visualization. This gradual process happens in microscopy. Multidimensional laser scanning microscopy can acquire very complex multichannel data from fixed or live specimen. New probes such as visible fluorescent proteins let us observe the expression of genes and track protein localization. Ion sensitive dyes change intensity with the concentration of ions in the cell. The laser scanning confocal allows us to record these processes in three dimensions over time. This work demonstrates the application of software analysis to multidimensional microscopy data. We introduce methods for volume investigation, ion flux analysis and molecular modeling. The visualization methods are based on a multidimensional data model to accommodate complex datasets. The software uses vector processing and multiple processors to accelerate volume rendering and achieve interactive rendering. The algorithms are based on human visual perception and allow the observer a wide range of mixed render modes. The software was used to reconstruct the pituitary development in zebrafish and observe the degeneration of neurons after injury in a mouse model. Calicum indicator dyes have long been used to study calcium fluxes. We optimized the imaging method to minimize impact on the cell. Live cells were imaged continuously for 45 minutes and subjected to increasing does of a drug. We correlated the amplitude of calcium oscillations to increasing doses of a drug and obtain single cell dose response curves. Because this method is very sensitive and measures single cell responses it has potential in drug discovery and characterization. Microtubules form a dynamic cytoskeleton, which is responsible for cell shape, intracellular transport and has an integral role in mitosis. A hallmark of microtubule organization is lateral interactions. Microtubules are bundles by proteins into dense structures. To estimate the contribution of this bundling process, we created a fractal model of microtubule organization. This model demonstrates that morphology of complex microtubule arrays can be explained by bundling alone. In summary we showed that advances in software for visualization, data analysis and modeling lead to new discoveries.}, subject = {Konfokale Mikroskopie}, language = {en} } @phdthesis{ThangarajSelvaraj2013, author = {Thangaraj Selvaraj, Bhuvaneish}, title = {Role of CNTF-STAT3 signaling for microtubule dynamics inaxon growth and maintenance: Implications in motoneuron diseases}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-76889}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2013}, abstract = {Neurotrophic factor signaling modulates differentiation, axon growth and maintenance, synaptic plasticity and regeneration of neurons after injury. Ciliary neurotrophic factor (CNTF), a Schwann cell derived neurotrophic factor, has an exclusive role in axon maintenance, sprouting and synaptic preservation. CNTF, but not GDNF, has been shown to alleviate motoneuron degeneration in pmn mutant mice carrying a missense mutation in Tbce gene, a model for Amyotrophic Lateral Sclerosis (ALS). This current study elucidates the distinct signaling mechanism by which CNTF rescues the axonal degeneration in pmn mutant mice. ...}, subject = {Ciliary neurotrophic factor}, language = {en} } @article{YadavSelvarajBenderetal.2016, author = {Yadav, Preeti and Selvaraj, Bhuvaneish T. and Bender, Florian L. P. and Behringer, Marcus and Moradi, Mehri and Sivadasan, Rajeeve and Dombert, Benjamin and Blum, Robert and Asan, Esther and Sauer, Markus and Julien, Jean-Pierre and Sendtner, Michael}, title = {Neurofilament depletion improves microtubule dynamics via modulation of Stat3/stathmin signaling}, series = {Acta Neuropathologica}, volume = {132}, journal = {Acta Neuropathologica}, number = {1}, doi = {10.1007/s00401-016-1564-y}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-188234}, pages = {93-110}, year = {2016}, abstract = {In neurons, microtubules form a dense array within axons, and the stability and function of this microtubule network is modulated by neurofilaments. Accumulation of neurofilaments has been observed in several forms of neurodegenerative diseases, but the mechanisms how elevated neurofilament levels destabilize axons are unknown so far. Here, we show that increased neurofilament expression in motor nerves of pmn mutant mice, a model of motoneuron disease, causes disturbed microtubule dynamics. The disease is caused by a point mutation in the tubulin-specific chaperone E (Tbce) gene, leading to an exchange of the most C-terminal amino acid tryptophan to glycine. As a consequence, the TBCE protein becomes instable which then results in destabilization of axonal microtubules and defects in axonal transport, in particular in motoneurons. Depletion of neurofilament increases the number and regrowth of microtubules in pmn mutant motoneurons and restores axon elongation. This effect is mediated by interaction of neurofilament with the stathmin complex. Accumulating neurofilaments associate with stathmin in axons of pmn mutant motoneurons. Depletion of neurofilament by Nefl knockout increases Stat3-stathmin interaction and stabilizes the microtubules in pmn mutant motoneurons. Consequently, counteracting enhanced neurofilament expression improves axonal maintenance and prolongs survival of pmn mutant mice. We propose that this mechanism could also be relevant for other neurodegenerative diseases in which neurofilament accumulation and loss of microtubules are prominent features.}, language = {en} }