@phdthesis{Fazeli2010,
  author    = {Fazeli, Gholamreza},
  title     = {Signaling in the induction of genomic damage by endogenous compounds},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-55634},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Reactive oxygen species (ROS) are continuously generated in cells and are involved in physiological processes including signal transduction but also their damaging effects on biological molecules have been well described. A number of reports in the literature implicate excessive oxidative stress and/or inadequate antioxidant defense in the pathogenesis of cancer, atherosclerosis, chronic and age related disorders. Several studies have indicated that activation of the renin-angiotensin-aldosterone-system can lead to the formation of ROS. Epidemiological studies have revealed higher renal cell cancer incidences and also higher cancer mortalities in hypertensive individuals. Recently, our group has shown that perfusion of the isolated mouse kidney with Ang II or treatment of several cell lines with Ang II leads to formation of DNA damage and oxidative base modifications. Here, we tried to scrutinize the pathway involved in genotoxicity of Ang II. We confirmed the genotoxicity of Ang II in two kidney cell lines of human origin. Ang II treatment led to the production of superoxide anions which we could hinder when we used the membrane permeable superoxide dismutase (SOD) mimetic TEMPOL. One of the enzymes which is activated in the cells after Ang II treatment and is able to produce ROS is NADPH oxidase. We demonstrated the activation of NADPH oxidase in response to Ang II by upregulation of its p47 subunit using RT-PCR. Also, pPhosphorylation of p47 subunit of NADPH oxidase after Ang II treatment was enhanced. Using two inhibitors we showed that NADPH oxidase inhibition completely prevents DNA damage by Ang II treatment. To differentiate between Nox2 and Nox4 isoforms of NADPH oxidase subunits in the genotoxicity of Ang II, we performed siRNA inhibition and found a role only for Nox4, while Nox2 was not involved. Next, we investigated PKC as a potential activator of NADPH oxidase. We showed that PKC becomes phosphorylated after Ang II treatment and also that inhibition of PKC hinders Ang II from damaging the cells. Our results from using several inhibitors of different parts of the pathway revealed that PKC activation in this pathway is dependent on the action of PLC on membrane phospholipids and production of IP3. IP3 binds to its receptor at endoplasmic reticulum (ER), opening a channel which allows calcium efflux into the cytoplasm. In this manner, both ER calcium stores and extracellular calcium cooperate so that Ang II can exert its genotoxic effect. PLC is activated by AT1R stimulation. We could also show that the genotoxicity of Ang II is mediated via AT1R signaling using the AT1R antagonist candesartan. In conclusion, here we have shown that Ang II is able to damage genomic damage in cell lines of kidney origin. The observed damage is associated with production of ROS. A decrease in Ang II-induced DNA damage was observed after inhibition of G-proteins, PLC, PKC and NADPH oxidase and interfering with intra- as well as extracellular calcium signaling. This leads to the following preliminary model of signaling in Ang II-induced DNA damage: binding of Ang II to the AT1 receptor activates PLC via stimulation of G-proteins, resulting in the activation of PKC in a calcium dependent manner which in turn, activates NADPH oxidase. NADPH oxidase with involvement of its Nox4 subunit then produces reactive oxygen species which cause DNA damage. Dopamine content and metabolism in the peripheral lymphocytes of PD patients are influenced by L-Dopa administration. The PD patients receiving a high dose of L-Dopa show a significantly higher content of dopamine in their lymphocytes compared to PD patients who received a low dose of L-Dopa or the healthy control. Central to many of the processes involved in oxidative stress and oxidative damage in PD are the actions of monoamine oxidase (MAO), the enzyme which is responsible for the enzymatic oxidation of dopamine which leadsing to production of H2O2 as a by-product. We investigated whether dopamine oxidation can cause genotoxicity in lymphocytes of PD patents who were under high dose L-Dopa therapy and afterward questioned the occurrence of DNA damage after dopamine treatment in vitro and tried to reveal the mechanism by which dopamine exerts its genotoxic effect. The frequency of micronuclei in peripheral blood lymphocytes of the PD patients was not elevated compared to healthy age-matched individuals, although the formation of micronuclei revealed a positive correlation with the daily dose of L-Dopa administration in patients who received L-Dopa therapy together with dopamine receptor agonists. In vitro, we describe an induction of genomic damage detected as micronucleus formation by low micromolar concentrations in cell lines with of different tissue origins. The genotoxic effect of dopamine was reduced by addition of the antioxidants TEMPOL and dimethylthiourea which proved the involvement of ROS production in dopamine-induced DNA damage. To determine whether oxidation of dopamine by MAO is relevant in its genotoxicity, we inhibited MAO with two inhibitors, trans-2-phenylcyclopropylamine hydrochloride (PCPA) and Ro 16-6491 which both reduced the formation of micronuclei in PC-12 cells. We also studied the role of the dopamine transporter (DAT) and dopamine type 2 receptor (D2R) signaling in the genotoxicity of dopamine. Inhibitors of the DAT, GBR-12909 and nomifensine, hindered dopamine-induced genotoxicity. These results were confirmed by treatment of MDCK and MDCK-DAT cells, the latter containing the human DAT gene, with dopamine. Only MDCK-DAT cells showed elevated chromosomal damage and dopamine uptake. Although stimulation of D2R with quinpirole in the absence of dopamine did not induce genotoxicity in PC-12 cells, interference with D2R signaling using D2R antagonist and inhibition of G-proteins, phosphoinositide 3 kinase and extracellular signal-regulated kinases reduced dopamine-induced genotoxicity and affected the ability of DAT to take up dopamine. Furthermore, the D2R antagonist sulpiride inhibited the dopamine-induced migration of DAT from cytosol to cell membrane. Overall, the neurotransmitter dopamine causes DNA damage and oxidative stress in vitro. There are also indications that high dose L-Dopa therapy might lead to oxidative stress. Dopamine exerts its genotoxicity in vitro upon transport into the cells and oxidization oxidation by MAO. Transport of dopamine by DAT has the central role in this process. D2R signaling is involved in the genotoxicity of dopamine by affecting activation and cell surface expression of DAT and hence modulating dopamine uptake. We provided evidences for receptor-mediated genotoxicity of two compounds with different mechanism of actions. The involvement of these receptors in many human complications urges more investigations to reveal whether abnormalities in the endogenous compounds-mediated signaling can play a role in the initiation of new conditions like carcinogenesis.},
  subject      = {Angiotensin II},
  language  = {en}
}
@phdthesis{Ruchty2010,
  author    = {Ruchty, Markus},
  title     = {Sensory basis of thermal orientation in leaf-cutting ants},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-48906},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Leaf-cutting ants have a highly developed thermal sense which the insects use to regulate the own body temperature and also to optimize brood and fungus development. Apart from the already described temperature guided behaviors inside the nest it is unknown to what extent the ants may use their thermal sense outside the nest. As part of the present thesis, the question was addressed whether leaf-cutting ants (Atta vollenweideri) are able to learn the position of a warm object as landmark for orientation during foraging. Using absolute conditioning, it was shown that ten training trials are sufficient to elicit the association be-tween food reward and the temperature stimulus. In the test situation (without reward) a significantly higher amount of ants preferred the heated site compared to the unheated con-trol. Importantly, thermal radiation alone was sufficient to establish the learned association and served as orientation cue during the test situation (chapter IV). Based on the experi-mental design used in the previous chapter, the localization of thermosensitive neurons, which detect the underlying thermal stimuli, is restricted to the head or the antennae of the ants. The antennal sensillum coeloconicum is a potential candidate to detect the thermal stimuli during the orientation behavior. In chapter V the sensillum coeloconicum of Atta vollenweideri was investigated concerning its gross morphology, fine-structure and the phy-siology of the associated thermosensitive neuron. The sensillum is predominantly located on the apical antennal segment (antennal tip) where around 12 sensilla are clustered, and it has a peg-in-pit morphology with a double walled, multiporous peg. The sensory peg is deeply embedded in a cuticular pit, connected to the environment only by a tiny aperture. The sen-sillum houses three receptor neurons of which one is thermosensitive whereas the sensory modality of the other two neurons remains to be shown. Upon stimulation with a drop in temperature, the thermosensitve neuron responds with a phasic-tonic increase in neuronal activity (cold-sensitive neuron) and shows rapid adaptation to prolonged stimulation. In ad-dition, it is shown that thermal radiation is an effective stimulus for the thermosensitive neuron. This is the first evidence that sensilla coeloconica play an important role during the thermal orientation behavior described in chapter IV. During the test situation of the classic-al conditioning paradigm, the ants showed rapid antennal movements, indicating that they scan their environment in order to detect the heated object. Rapid antennal movements will result in rapid discontinuities of thermal radiation that re-quire thermosensitive neurons with outstanding sensitivity and high temporal resolution. In Chapter VI the question was addressed whether the thermosensitive neuron of the sensilla coeloconica fulfils these preconditions. Extracellular recordings revealed that the neuron is extremely sensitive to temperature transients and that, due to the response dynamics, an estimated stimulus frequency of up to 5 Hz can be resolved by the neuron. Already a tem-perature increase of only 0.005 °C leads to a pronounced response of the thermosensitive neuron. Through sensory adaptation, the sensitivity to temperature transients is maintained over a wide range of ambient temperatures. The discovered extreme sensitivity, the high temporal resolution and the pronounced adaptation abilities are further evidence support-ing the idea that sensilla coeloconica receive information of the thermal environment, which the ants may use for orientation. In order to understand how the ants use their thermal environment for orientation, it is ne-cessary to know where and how thermal information is processed in their central nervous system. In Chapter VII the question is addressed where in the brain the thermal information, specifically received by the thermosensitive neuron of sensilla coeloconica, is represented. By selectively staining single sensilla coeloconica, the axons of the receptor neurons could be tracked into the antennal lobe of Atta vollenweideri workers. Each of the three axons termi-nated in a single functional unit (glomerulus) of the antennal lobe. Two of the innervated glomeruli were adjacent to each other and are located lateral, while the third one was clear-ly separate and located medial in the antennal lobe. Using two-photon Ca2+ imaging of an-tennal lobe projection neurons, the general representation of thermal information in the antennal lobe was studied. In 11 investigated antennal lobes up to six different glomeruli responded to temperature stimulation in a single specimen. Both, warm- and cold-sensitive glomeruli could be identified. All thermosensitive glomeruli were located in the medial half of the antennal lobe. Based on the correlative evidence of the general representation of thermal information and the results from the single sensilla stainings, it is assumed that thermal information received by sensilla coeloconica is processed in the medial of the three target glomeruli. This part of the thesis shows the important role of the antennal lobe in temperature processing and links one specific thermosensitive neuron to its target region (a single glomerulus). In chapter V it was shown that the sensilla coeloconica are clustered at the antennal tip and have an extraordinary peg-in-pit morphology. In the last chapter of this thesis (Chapter VIII) the question is addressed whether the morphology of the sensilla coeloconica predicts the receptive field of the thermosensitive neuron during the detection of thermal radiation. The sensory pegs of all sensilla coeloconica in the apical cluster have a similar orientation, which was not constraint by the shape of the antennal tip where the cluster is located. This finding indicates that the sensilla coeloconica function as a single unit. Finally the hypothesis was tested whether a single sensillum could be direction sensitive to thermal radiation based on its eye-catching morphology. By stimulating the thermosensitive neuron from various angles around the sensillum this indeed could be shown. This is the last and most significant evi-dence that the sensilla coeloconica may be adapted to detect spatially distributed heated objects in the environment during the thermal landmark orientation of ants.},
  subject      = {Neurobiologie},
  language  = {en}
}
@phdthesis{TranVan2010,
  author    = {Tran-Van, Hieu},
  title     = {Semaphorin receptors in the immunological synapse: regulation and measles virus-driven modulation},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-53926},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {J{\"a}hrlich gehen ca. 164000 Todesf{\"a}lle (WHO, 2008) auf eine Infektion mit Masernviren (MV) zur{\"u}ck. Die Hauptursache f{\"u}r den t{\"o}dlichen Verlauf der Krankheit ist die MV-induzierte Immunsuppression, deren zugrunde liegende Mechanismen noch nicht v{\"o}llig aufgekl{\"a}rt sind. Es gibt Hinweise darauf, dass MV einerseits die Funktionalit{\"a}t von T-Zellen beeintr{\"a}chtigt, indem es die Aktindynamik behindert, und andererseits dendritische Zellen (DC) infiziert, was dazu f{\"u}hrt, dass sie T-Zellen nicht mehr vollst{\"a}ndig aktivieren k{\"o}nnen. W{\"a}hrend der Entwicklung bzw. des Wachstums von Neuronen kommt es zum Kollaps wachsender Dendriten, wenn Semaphorine (insbesondere SEMA3A) an den Rezeptor Plexin-A1 (plexA1) und seinem Korezeptor Neuropilin-1 (NP-1) binden. Dieser Kollaps wird durch interferenz mit der Aktindynamik verursacht. In dieser Studie wurde die Funktion dieser drei Molek{\"u}le in Immunzellen bzw. ihre Rolle in der MV-induzierten Immunsuppression untersucht. Es konnte gezeigt werden, dass plexA1 eine wichtige Komponente der humanen immunologischen Synapse (IS) ist. Nach CD3/CD28-Ligation kommt es zur transienten Translokation zur T-Zelloberfl{\"a}che und zur Akkumulation an der Kontaktfl{\"a}che zwischen T-Zelle und DC bzw. α-CD3/CD28 beschichteten Mikropartikeln. Wird die plexA1-Expression inhibiert (RNAi) oder die plexA1-Funktion gest{\"o}rt (exogenes Blockieren oder Expression einer dominant negativen Mutante), ist die T-Zellexpansion reduziert. Nach MV-Exposition ist die Translokation von plexA1 und NP-1, ebenfalls einem wichtigen Bestandteil der immunologischen Synapse, zur Kontaktfl{\"a}che auf T-Zellseite gest{\"o}rt. Des Weiteren behindert eine MV-Infektion den plexA1/NP-1-Metabolismus in reifenden DC und f{\"u}hrt zus{\"a}tzlich zu einer fr{\"u}hen und starken Aussch{\"u}ttung von SEMA3A durch DC, insbesondere in Gegenwart allogener T-Zellen. Durch rasterelektronenmikroskopische Aufnahmen wurde gezeigt, dass SEMA3A einen transienten Verlust aktinbasierter Zellforts{\"a}tze bei T-Zellen zur Folge hat. Zus{\"a}tzlich reduziert SEMA3A das chemotaktische Migrationsverhalten von DC und T Zell und die Frequenz ihrer Konjugat-Bildung. Zusammenfassend stellt sich die Situation so dar, dass MV die Semaphorinrezeptorfunktion zum einen dadurch beeintr{\"a}chtigt, dass es die Rekrutierung der Rezeptoren zur IS verhindert und zum anderen zur verfr{\"u}hten Aussch{\"u}ttung des kollapsinduzierenden Liganden SEMA3A f{\"u}hrt. Beide Ph{\"a}nomene k{\"o}nnten einen wichtigen Beitrag zur MV-induzierten Immunsuppression leisten.},
  subject      = {Masernvirus},
  language  = {en}
}
@phdthesis{Leonhardt2010,
  author    = {Leonhardt, Sara Diana},
  title     = {Resin collection and use in stingless bees},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-51588},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Harz ist ein klebriges Pflanzenprodukt mit einem oft intensiven aromatischen Geruch. Es wird von B{\"a}umen produziert, um Wunden zu verschließen und sch{\"a}dliche Besucher abzuwehren. Einige Insektenarten haben jedoch die erstaunliche F{\"a}higkeit entwickelt, mit der klebrigen Substanz umzugehen und sie sich gar zu Nutzen zu machen. So verwenden Bienen Harz beispielsweise zum Nestbau und zur Verteidigung ihrer Kolonien. W{\"a}hrend allgemein bekannt ist, dass Bienen Pollen und Nektar sammeln, wird der Tatsache, dass sie auch Harz sammlen, allerdings sehr viel weniger Beachtung geschenkt. Ziel meiner Dissertation war es daher, herauszufinden, warum, wie und wo stachellose Bienen in Borneo (sieben untersuchte Bienenarten), Australien (acht Arten) und Costa Rica (27 Arten) Pflanzenharze sammeln und verwerten. Diese Arbeit behandelt somit die enge Beziehung zwischen einer eusozialen Insektengattung und einem chemisch und physiologisch hoch komplexen Pflanzenprodukt, das Bienen nicht nur als Nestmaterial und zur Verteidigung dient, sondern auch eine wesentliche Bedeutung f{\"u}r deren chemische Diversit{\"a}t hat. Stachellose Bienen verhalten sich hochgradig opportunistisch, wenn sie Harz sammeln, d.h. verschiedene Bienenarten sammeln Harz von denselben Baumarten, wobei sie nahezu jede verf{\"u}gbare Harzquelle nutzen. Dabei finden und erkennen sie Harzquellen anhand einiger charakteristischer Mono- und Sesquiterpene, nutzen jedoch nicht das gesamte Harz-Bouquet. Die Menge an eingetragenem Harz unterscheidet sich zwischen verschiedenen Bienenarten und kolonien und varriert mit verschiedenen Umweltbedingungen. Insbesondere eine Bedrohung durch Fressfeinde (z. B. Ameisen) f{\"u}hrt zu einer massiven Steigerung des Harzeintrages; eine manuelle Zerst{\"o}rung des Nesteinganges hat dagegen relativ wenig Einfluss. Das eingetragene Harz wird zum Nestbau und zur Verteidigung gegen Fressfeinde und Mikroben genutzt. Dar{\"u}ber hinaus dient es als Quelle f{\"u}r Terpene, die von den Bienen in ihre chemischen Oberfl{\"a}chenprofile eingebaut werden (kutikul{\"a}re Terpene). Dabei {\"u}bertragen sie nur einen Bruchteil (8 \%) der gewaltigen Menge (>> 1000) an Terpenen, die man im Harz von B{\"a}umen findet, auf ihre Oberfl{\"a}che. Die {\"u}bertragenen Terpene bleiben in ihrer Struktur unver{\"a}ndert, allerdings unterscheiden sich die Bienenarten in der Zusammensetzung der Terpenprofile auf ihrer Oberfl{\"a}che, obwohl alle untersuchten Arten Harz von denselben B{\"a}umen sammeln. Die unterschiedlichen Terpenprofile sowie die Tatsache, dass nur wenige Terpene aus dem Harz aufgenommen werden, deuten auf einen artspezifischen und bisher unbekannten Filterungsmechanismus bei stachellosen Bienen hin. Auch {\"u}bersteigt durch die Aufnahme von Terpenen die chemische Diversit{\"a}t der Oberfl{\"a}chenprofile von stachellosen Bienen die zahlreicher anderer Hymenopteren. Da Bienen die Terpene aus dem Harz nur „filtern", sie dabei aber nicht ver{\"a}ndern, sind s{\"a}mtliche Bienenarten aus Borneo, Australien und Costa den charakteristischen Harzprofilen von B{\"a}umen aus ihren Ursprungsgebieten chemisch sehr {\"a}hnlich. Da in jeder tropischen Region andere Baumarten vorkommen, varriert die chemische Zusammensetzung der vorkommenden Harze und damit der kutikul{\"a}ren Terpene von dort vorkommenden Bienen. Die meisten Bienenarten mit kutikul{\"a}ren Terpenen findet man in Borneo, wo nahezu 100 \% der untersuchten Arten aus Baumharzen gewonnene Terpene in ihre chemischen Profilen einbauen. Im Gegensatz dazu sind es in Costa Rica nur 40 \% der untersuchten Arten. Auch sammeln in Borneo gelegentlich 9 von 10 Arbeiterinnen einer Tetragonilla collina Kolonie Harz, wohingegen in Australien maximal 10 \% und in Costa Rica maximal 40 \% der Arbeiterinnen einer Kolonie Harz sammeln. Das Vorherrschen von Harz und aus Harz gewonnenen Terpenen in der chemischen {\"O}kologie von Bienen auf Borneo spiegelt das Vorherrschen einer bestimmten s{\"u}dostasiatischen Baumfamilie wieder: der Dipterocarpaceen, deren Holz ungew{\"o}hnlich harzig ist. Ein solch enger Zusammenhang zwischen der Chemie von Bienen und der von Baumharzen verdeutlicht die enge Beziehung zwischen stachellosen Bienen und den B{\"a}umen in ihrem Habitat. Die kutikul{\"a}ren Terpene sch{\"u}tzen ihre Tr{\"a}ger vor Angreifern (z.B. Ameisen) und Mikrobenbefall. Dabei variiert eine bestimmte Gruppe - Sesquiterpene - am meisten zwischen den Arten. Diese Terpengruppe manipuliert die nat{\"u}rlichweise auftretende zwischen-artliche Aggression, indem sie letztere bei jenen Arten verringert, die selbst keine Sesquiterpene in ihrem Profil haben. Aggressionsminderung durch chemische Komponenten, welche aus der Umwelt aufgenommen werden, stellt somit einen bisher unbekannten Mechanismus dar, um Toleranz zwischen sonst aggressiven Arten zu erreichen. Eine derarte Herabsetzung von aggressiven Verhalten bei stachellosen Bienen kann dar{\"u}ber hinaus ein entscheidender Faktor f{\"u}r das Entstehen sogenannter Nestaggregationen sein. Dabei nisten Kolonien von Bienenarten mit und Bienenarten ohne Sesquiterpene in ihrem chemischen Profil in unmittelbarer Nachbarschaft, ohne gegeneinander aggressiv zu sein. Im Hinblick auf die zahlreichen Funktionen, die Harze und/oder aus dem Harz gewonnene Substanzen f{\"u}r stachellose Bienen haben, stellt Harz zweifelsohne eine bedeutende Ressource in der Welt der Bienen dar - eine Ressource, die einen direkten Einfluss auf deren chemische {\"O}kologie, Verteidigungsmechanismen und zwischen-artliche Kommunikation aus{\"u}bt. Wie genau die Bienen ihre artspezifischen Terpenprofile erzeugen, insbesondere, wie es ihnen gelingt, dabei ganze Terpengruppen auszuschließen, muss in zuk{\"u}nftigen Studien genauer untersucht werden. Auch stellt sich die Frage, wie wichtig eine hohe Diversit{\"a}t an Harzquellen und damit Baumarten f{\"u}r die Bienen ist! Es ist durchaus m{\"o}glich, dass neben einer Vielfalt an Bl{\"u}tenpflanzenarten auch der „Harzreichtum" f{\"u}r das Wohlergehen der Bienen eine entscheidende Rolle spielt.},
  subject      = {stachellose Biene},
  language  = {en}
}
@phdthesis{MonzonCasanova2010,
  author    = {Monz{\´o}n Casanova, Elisa},
  title     = {Rat iNKT Cells: Phenotype and Function},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-56526},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {iNKT cells are a population of T cells with unique characteristics. In contrast to most αβ T cells which recognize peptides presented by highly polymorphic MHC molecules, iNKT cells are reactive to glycolipids presented by CD1d, a non-polymorphic MHC-I like molecule. Moreover, whereas MHC-restricted αβ T cells bear highly variable receptors (TCRs) formed after somatic recombination of the V(D)J gene segments, the TCR of iNKT cells is formed by an invariant α chain, which always contains the same gene segments: AV14 and AJ18; and a β chain of limited BV gene usage: BV8S2, BV7 or BV2, in the mouse. This invariant α chain is the reason for which these cells are named "i" and the NK part of their name refers to the expression of receptors typical of natural killer (NK) cells. iNKT cells recognize glycolipids of endogenous and microbial origin. After activation they secrete large amounts of very different cytokines such as IFN-γ and IL-4 and thus influence immune responses and pathological conditions. One of the most potent iNKT cell agonists, recognized by the semi-invariant TCR, is the synthetic glycolipid α-Galactosylceramide (α-Gal). iNKT cells can be visualized using CD1d-multimeric complexes loaded with α-Gal and flow cytometry, since this reagent has enough avidity to stain these cells. Interestingly, mouse iNKT cells can be stained with human α-Gal-loaded CD1d oligomers and human iNKT cells can also be visualized with mouse α-Gal-loaded CD1d oligomers, indicating a high degree of conservation of the recognition of α-Gal presented by CD1d through evolution. Previous studies showed that rats have the genes necessary to build semi-invariant TCRs: They have a CD1d homologue; one or two BV8S2 homologues and interestingly, up to ten AV14 gene segments, which are highly conserved when compared to the mouse genes. Importantly, it has been shown at least for two of these AV14 gene segments that they can produce invariant TCRα chains which, when coexpressed with BV8-containing β chains, react to α-Gal presented by rat CD1d. Furthermore, ex vivo stimulation of primary splenocytes with α-Gal results in the secretion of IL-4 and IFN-γ. Surprisingly, rat semi-invariant TCRs do not recognize α-Gal presented by mouse CD1d and accordingly, mouse α-Gal-loaded CD1d tetramers failed to stain a discrete population of rat iNKT cells. Taking all together, despite that strong evidence suggested that iNKT cells are present in the rat, the direct identification of such population and the analysis of CD1d-restricted immune responses were still pending for this species. Hence the work presented in this doctoral thesis was aimed to identify iNKT cells, to analyze their phenotype and also to study the distribution and function of CD1d in the rat. For these purposes, we produced essential reagents which were still lacking such as rat specific anti-CD1d monoclonal antibodies and rat CD1d oligomers. Importantly, two of three anti-rat CD1d monoclonal antibodies (all of them generated in our laboratory before this thesis was initiated) also recognized mouse CD1d and therefore allowed a direct comparison of CD1d expression between rat and mouse. Whereas CD1d distribution in the hematopoietic system was found to be extremely similar between these two species; in non-lymphatic tissues important differences were observed. Interestingly, CD1d protein was detected at not yet described sites such as the rat exocrine pancreas and rat and mouse Paneth cells. These monoclonal antibodies did not only allowed the analysis of CD1d expression, but also the first demonstration of the function of rat CD1d as an antigen presenting molecule, since cytokine release in response to α-Gal was blocked when they were added to ex vivo cultures of rat primary cells. Staining of primary rat iNKT cells (possible now with the newly generated rat CD1d oligomers) revealed interesting similarities with human iNKT cells. First, we observed that rat iNKT cells are only a minority among all NKR-P1A/B positive T cells. Human iNKT cells constitute also a very small proportion of NKR-P1A (CD161) expressing T cells, whereas in mice inbred strains which express NKR-P1C (NK1.1), most of NKRP1C expressing T cells are iNKT cells. Second, the majority of rat iNKT cells are either CD4 or DN and only a small proportion expresses CD8β. These findings are similar to humans and different to mice which lack CD8+ iNKT cells. Third, analysis of various inbred rat strains demonstrated different iNKT cell frequencies which correlated with cytokine secretion after α-Gal stimulation of primary cells. In comparison to mice, iNKT cell numbers are markedly reduced in rats. In F344 rats, inbred rat strain which released the highest cytokine amounts after α-Gal stimulation, approximately 0.25\% and 0.1\% of total liver and spleen lymphocytes, respectively, are iNKT cells. In contrast, in LEW rats iNKT cells were practically absent and neither IL-4 nor IFN-γ were detected after stimulation of primary cells with α-Gal. Once more, these frequencies are very close to those observed in humans. Last, as reported for human peripheral blood cells, rat iNKT cells could be easily expanded in vitro by adding α-Gal to cultures of intrahepatic lymphocytes, whereas the expansion of mouse iNKT cells was not possible using the same protocol. The presence of a multimember AV14 gene segment family in the rat is an intriguing characteristic. These AV14 gene segments are extremely homologous except in the CDR2α region. Based on the amino acid sequence of this region they have been divided into two different types: Type I and II. A specific tissue distribution of the different types was proposed in the first study where the presence of several AV14 gene segments was described. We also analyzed the AV14 gene segment usage in F344 and LEW inbred rat strains. In F344 rats we found no preferential usage of either AV14 gene segment type in the spleen and the liver but type II AV14 gene segments appeared more frequently in the thymus. In contrast, LEW rats show a preferential usage of type I AV14 gene segments in all three compartments analyzed: Thymus, spleen and liver. Taken all together, the usage of newly generated reagents allowed to gain novel insights into CD1d expression in the rat and in the mouse and to directly identify rat iNKT cells for the first time. The phenotypic and functional analysis of rat iNKT cells revealed numerous similarities with human iNKT cells. These are of special interest, since rats serve to investigate several pathological conditions including models for autoimmune diseases. The possibility now to analyze iNKT cells and CD1d-restricted T cell responses in the rat might help to understand the pathogenesis of such diseases. In addition, the uncomplicated in vitro expansion and culture of rat iNKT cells should facilitate the analysis of the immunomoldulatory capacities of these cells.},
  subject      = {Ratte},
  language  = {en}
}
@phdthesis{BarcenaUribarri2010,
  author    = {Barcena Uribarri, Ivan},
  title     = {Porins in the genus Borrelia : Characterization of P66 and P13},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-55339},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Die Gattung Borrelia geh{\"o}rt zur Familie der Spirochaetes, welche sich den Gram-negativen Bakterien zuordnen lassen. F{\"u}r diese Familie charakteristisch ist eine l{\"a}ngliche, helikale Form, die L{\"a}ngen von 5 - 250 µm erreichen kann. Den Spirochaeten geh{\"o}ren diverse Pathogene an wie Treponema und Leptospira, die Erreger der Syphillis und der Leptospirose. Borrelien verursachen beim Menschen zwei schwere Krankheiten: Die Lyme-Borreliose (LB) und das R{\"u}ckfallfieber (RF). Als Pathogen besitzen Borrelien einen Lebenszyclus, in dem sie zwischen Gliederf{\"u}ßern als Vektoren und S{\"a}ugetieren (oft kleinen Nagetieren) als Wirt wechseln. Um das {\"U}berleben in derart unterschiedlichen Organismen zu sichern und die Immunantwort des Wirtes zu unterdr{\"u}cken, ben{\"o}tigt ein Organismus mit einem solch komplexen Lebenszyklus eine außergew{\"o}hnliche Regulierung der Proteinexpression. Die Lyme-Borelliose stellt eine multisystemische Krankheit dar, die verschiedene Organe, wie Haut, Gelenke und das Nervensystem betreffen kann. H{\"a}ufig kommt es zu einer sich kreisf{\"o}rmig ausbreitenden R{\"o}tung, die erythema migrans genannt wird, die zur klinischen Diagnose genutzt wird. Sie erscheint nach einem Zeckenbiss und kann einen Durchmesser von bis zu 15 cm weit erreichen. R{\"u}ckfallfieber erkennt man an pl{\"o}tzlich auftretenden Fiebersch{\"u}ben, die von weiteren Symptomen wie Sch{\"u}ttelfrost, Kopfschmerzen, Muskel und Gelenkschmerzen oder {\"U}belkeit begleitet werden. Beide Krankheiten k{\"o}nnen in fr{\"u}hen Stadien der Infektion leicht mit der Gabe von Antibiotika behandelt werden. Die verschiedenen Arten der Gattung Borrelia besitzen ein relativ kleines Genom. Da außerdem viele der vorhandenen Gene f{\"u}r Virulenzfaktoren und wirtsspezifische Anpassungen codieren, fehlen den Borrelien wichtige Genen f{\"u}r die Biosynthese von Aminos{\"a}uren, Fetts{\"a}uren oder Nukleotiden. Diese metabolischen Defizite werden durch die Aufnahme von durch den Wirt produzierten N{\"a}hrstoffen ausgeglichen. Den ersten Schritt der N{\"a}hrstoffaufnahme {\"u}bernehmen Porine. Dies sind wassergef{\"u}llte Kan{\"a}le, die die Aufnahme und den Transport von essentiellen Molek{\"u}len {\"u}ber die {\"a}ußere Membran erm{\"o}glichen. P66, P13 und Oms28 wurden bei Borrelia burgdorferi, Oms38 bei R{\"u}ckfallfieber verursachenden Spirochaeten gefunden. P66 ist ein einzelnes Porin mit einer extrem hohen Leitf{\"a}higkeit von 11 nS. P13 ist ein kleines Protein (13kDa) mit einer α helikalen Sekund{\"a}rstruktur, die keinerlei {\"A}hnlichkeit zu den bisherigen Modellen von bekannten Porinen aufweist. Aufgrund seiner Assoziation mit der periplasmatischen Seite der Membran wurde die Funktion als Porin f{\"u}r Oms28 in letzter Zeit stark angezweifelt. Oms38 ist ein Dicarboxylat-spezifisches Porin mit Homologen bei Lyme-Borreliose verursachenden Arten. Das Ziel der vorliegenden Arbeit war das vorhandene Wissen {\"u}ber P66 und P13 als Porine der Gattung Borrelia zu erweitern. Die beiden Proteine unterscheiden sich strukturell stark von den bisher bekannten Porine Gram-negativer Bakterien und sind daher geeignete Forschungsobjekte, um die speziellen Anforderungen an Borrelienporinen zu erforschen. Das Ziel dieser Arbeit war die Erforschung der beiden in Borrelien beschriebenen Proteine P66 und P13. Gerade weil sich beide in Aufbau und Gr{\"o}ße von bekannten Porinen Gram-negativer Bakterien unterscheiden und somit in spezifische Prozesse bei der Gattung Borrelia involviert sein k{\"o}nnten, ist die Forschung auf diesem Gebiet auch weiterhin von h{\"o}chstem Interesse. Im ersten Projekt dieser Arbeit wurden das Vorkommen und die porenformende Aktivit{\"a}t von P66 in verschiedenen Borrelia-Arten (Lyme-Borreliose und R{\"u}ckfallfieber) untersucht. Bei P66 handelt es sich um das am besten untersuchte Porin der Borrelien, das eine Doppelfunktion als Porin und als Adhesin besitzt. Da sich alle bisherigen Ergebnisse auf B. burgdorferi beziehen, ist wenig bis gar nichts {\"u}ber homologe Proteine in anderen Borrelien-Arten bekannt. Deswegen wurden jeweils drei Arten, die Lyme-Borreliose und R{\"u}ckfallfieber verursachen, ausgew{\"a}hlt und an deren P66-Homologe die porenformende Aktivit{\"a}t {\"u}berpr{\"u}ft. F{\"u}nf von sechs zeigten dabei eine {\"a}hnliche Einzelkanalleitf{\"a}higkeit wie P66, die im Bereich von 9 - 11 nS lagen, bei gleichzeitig kaum vorhandener Selektivit{\"a}t f{\"u}r eine bestimmte Ionensorte. Auch eine Spannungsabh{\"a}ngigkeit, die bei 30 - 70 mV begann, war messbar. Nur im Fall von B. hermsii konnten keine Poren gefunden werden. Dabei ist noch nicht gekl{\"a}rt, ob das Fehlen der porenbildenden Aktivit{\"a}t einem evolution{\"a}ren Verlust der Funktion als Pore oder einer h{\"o}heren Anf{\"a}lligkeit gegen{\"u}ber den verwendeten Detergenzien geschuldet ist. In einem weiteren Projekt wurde der kontrovers diskutierte Porendurchmesser von P66 aus B.burgdorferi mit empirischen Mitteln analysiert. In fr{\"u}heren theoretischen Studien wurde der Kanaldurchmesser auf 2,6 nm gesch{\"a}tzt. Dieser sehr große Durchmesser w{\"u}rde allerdings die Schutzfunktion der Außenmembran verhindern. Mit Hilfe von ungeladenen Substanzen gelang eine Bestimmung des Innendurchmessers von P66 auf 1,8 nm am Eingang und 0,8 nm an der Engstelle der Pore. Zus{\"a}tzlich f{\"u}hrte eine unerwartete Blockierung der Pore durch einige dieser Substanzen zu der Erkenntnis, dass P66 einen oligomeren (wahrscheinlich oktameren) Aufbau besitzt. Ein solcher Aufbau konnte bisher noch nie nachgewiesen werden und k{\"o}nnte von daher ein einzigartiges Merkmal von Borrelien oder Spirochaeten sein. Das dritte Projekt besch{\"a}ftigte sich mit der rekombinanten Produktion eines Proteins von B. burgdorferi mit immunogenen Eigenschaften. Dieses k{\"o}nnte dazu verwendet werden, neue Diagnose Tests und Therapien zu entwickeln. P13 kommt in verschiedenen LB- und RF-Arten vor und besitzt kein bekanntes bakterielles Homolog. Diese Fakten machen aus P13 einen geeigneten Kandidaten als therapeutisches Ziel. Aus diesem Grund wurde das P13-Gen in zwei unterschiedliche Organismen kloniert. Zum einen in E. coli, wo zwei verschiedene Konstrukte zur Kl{\"a}rung der Rolle des periplasmatisch verdauten C-Terminus dienen sollten. Zum anderen in Tabakpflanzen {\"u}ber Agrobacterium tumefaciens, mittels eines Virus. Dabei vermehrt sich der Vektor in den Zellen der Pflanze, breitet sich aus und produziert gleichzeitig das gew{\"u}nschte Protein. Mit Hilfe dieser zweiten Expressionsmethode sollte es m{\"o}glich sein, große Mengen des rekombinanten Proteins zu erzeugen und gleichzeitig die Kosten und den Zeitbedarf zu senken. Das letzte Projekt besch{\"a}ftigte sich mit dem Außenmembran-Komplexom von B. burgdorferi und konzentrierte sich dabei auf die Komplexe von P13 und P66. Blue Native PAGE und 2D-SDS PAGE wurden als Techniken ausgew{\"a}hlt. Es konnte gezeigt werden, dass P66 das einzige Protein ist, das am vermutlich oktameren Aufbau der 11 nS Pore beteiligt ist. Zus{\"a}tzlich gelang es, den Komplex in zwei H{\"a}lften zu spalten, die ungef{\"a}hr das halbe Molekulargewicht bei einer Leif{\"a}higkeit von 5,5 nS zeigten. Im Fall des P13-Komplexes konnte eine m{\"o}gliche Verkn{\"u}pfung mit OspC entdeckt werden. Die Gelelution des Komplexes und anschließende Tests mit Hilfe der Black-Lipid-Bilayer-Methode ergaben eine Aktivit{\"a}t von 0,6 nS. Dies steht im starken Gegensatz zu der vorher f{\"u}r P13beschriebenen Gr{\"o}ße von 3,5 nS. Zusammenfassend l{\"a}sst sich sagen, dass P66 ein in vielen Borrelienarten vorkommendes und damit weit verbreitetes Porin mit Homologen in LB- und RF-Spezies ist, die {\"a}hnliche Charakteristika besitzen. Der Durchmesser dieser Pore konnte unter Ber{\"u}cksichtigung der Eigenschaften eines molekularen Siebes genauer bestimmt werden. Im Fall von P13 k{\"o}nnte dessen rekombinante Produktion es erlauben, dieses Protein als Hilfsmittel zur Diagnose und zur medizinischen Therapie einzusetzen. Zus{\"a}tzlich k{\"o}nnte der gefundene Bezug zu OspC dazu beitragen, in Zukunft mehr {\"u}ber die Funktion dieses interessanten Proteins herauszufinden.},
  subject      = {Porins},
  language  = {en}
}
@phdthesis{Hartmann2010,
  author    = {Hartmann, Thomas},
  title     = {Nitrogen metabolism in Aspergillus fumigatus with emphasis on the oligopeptide transporter (OPT) gene family},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-54027},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {The saprophytic filamentous fungus Aspergillus fumigatus has been gaining importance as an opportunistic human pathogen over the past decades. Advances in modern medicine have created a growing group of patients susceptible to infection with A. fumigatus, often contracting potentially deadly invasive aspergillosis. The virulence of this pathogen appears to be a multifactorial trait, a combination of physiological characteristics that enables the fungus to infect immunocompromised humans. This work concentrates on the nitrogen metabolism of A. fumigatus, which is essential for meeting the nutritional needs inside the human host. Using DNA microarrays, the transcriptional response during growth on three different secondary nitrogen sources was examined, which revealed the metabolic versatility of A. fumigatus, especially when challenged with proteins as the sole source of nitrogen. In-depth transcriptional profiling of the eight-member oligopeptide transporter (OPT) gene family underlined the importance of oligopeptide transport for growth on complex nitrogen sources like BSA or collagen. Heterologous expression of the opt genes in Saccharomyces cerevisiae showed their functionality as oligopeptide transporters, and characterized their substrate specificity. Using a Cre/loxP based genetic tool, a complete deletion of all opt genes in A. fumigatus was achieved. The resultant strain exhibited diminished growth on medium where the oligopeptide GPGG was the sole nitrogen source, but did not show any other in vitro phenotype. The opt deletion strain was not attenuated in virulence in a murine model of pulmonary aspergillosis, suggesting that the OPT gene family is not necessary for successful infection. The connection of oligopeptide transport and extracellular proteolytic activity was investigated by deleting the genes encoding Dpp4 and Dpp5, two dipeptidyl peptidases, or PrtT, the transcriptional regulator of major secreted proteases, in the complete opt deletion background. In contrast to the deletion of dpp4 and dpp5, which did not result in any additional phenotype, the absence of prtT led to a drastic growth defect on porcine lung agar. This suggests a synergistic action of extracellular proteolytic digest of proteins and transport of oligopeptide degradation products into the cell. Finally, this work established the bacterial β-Rec/six site-specific recombination system as a novel genetic tool for targeted gene deletion in A. fumigatus.},
  subject      = {Aspergillus fumigatus},
  language  = {en}
}
@phdthesis{Brandstaetter2010,
  author    = {Brandstaetter, Andreas Simon},
  title     = {Neuronal correlates of nestmate recognition in the carpenter ant, Camponotus floridanus},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-55963},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {Cooperation is beneficial for social groups and is exemplified in its most sophisticated form in social insects. In particular, eusocial Hymenoptera, like ants and honey bees, exhibit a level of cooperation only rarely matched by other animals. To assure effective defense of group members, foes need to be recognized reliably. Ants use low-volatile, colony-specific profiles of cuticular hydrocarbons (colony odor) to discriminate colony members (nestmates) from foreign workers (non-nestmates). For colony recognition, it is assumed that multi-component colony odors are compared to a neuronal template, located in a so far unidentified part of the nervous system, where a mismatch results in aggression. Alternatively, a sensory filter in the periphery of the nervous system has been suggested to act as a template, causing specific anosmia to nestmate colony odor due to sensory adaptation and effectively blocking perception of nestmates. Colony odors are not stable, but change over time due to environmental influences. To adjust for this, the recognition system has to be constantly updated (template reformation). In this thesis, I provide evidence that template reformation can be induced artificially, by modifying the sensory experience of carpenter ants (Camponotus floridanus; Chapter 1). The results of the experiments showed that template reformation is a relatively slow process taking several hours and this contradicts the adaptation-based sensory filter hypothesis. This finding is supported by first in-vivo measurements describing the neuronal processes underlying template reformation (Chapter 5). Neurophysiological measurements were impeded at the beginning of this study by the lack of adequate technical means to present colony odors. In a behavioral assay, I showed that tactile interaction is not necessary for colony recognition, although colony odors are of very low volatility (Chapter 2). I developed a novel stimulation technique (dummy-delivered stimulation) and tested its suitability for neurophysiological experiments (Chapter 3). My experiments showed that dummy-delivered stimulation is especially advantageous for presentation of low-volatile odors. Colony odor concentration in headspace was further increased by moderately heating the dummies, and this allowed me to measure neuronal correlates of colony odors in the peripheral and the central nervous system using electroantennography and calcium imaging, respectively (Chapter 4). Nestmate and non-nestmate colony odor elicited strong neuronal responses in olfactory receptor neurons of the antenna and in the functional units of the first olfactory neuropile of the ant brain, the glomeruli of the antennal lobe (AL). My results show that ants are not anosmic to nestmate colony odor and this clearly invalidates the previously suggested sensory filter hypothesis. Advanced two-photon microscopy allowed me to investigate the neuronal representation of colony odors in different neuroanatomical compartments of the AL (Chapter 5). Although neuronal activity was distributed inhomogeneously, I did not find exclusive representation restricted to a single AL compartment. This result indicates that information about colony odors is processed in parallel, using the computational power of the whole AL network. In the AL, the patterns of glomerular activity (spatial activity patterns) were variable, even in response to repeated stimulation with the same colony odor (Chapter 4\&5). This finding is surprising, as earlier studies indicated that spatial activity patterns in the AL reflect how an odor is perceived by an animal (odor quality). Under natural conditions, multi-component odors constitute varying and fluctuating stimuli, and most probably animals are generally faced with the problem that these elicit variable neuronal responses. Two-photon microscopy revealed that variability was higher in response to nestmate than to non-nestmate colony odor (Chapter 5), possibly reflecting plasticity of the AL network, which allows template reformation. Due to their high variability, spatial activity patterns in response to different colony odors were not sufficiently distinct to allow attribution of odor qualities like 'friend' or 'foe'. This finding challenges our current notion of how odor quality of complex, multi-component odors is coded. Additional neuronal parameters, e.g. precise timing of neuronal activity, are most likely necessary to allow discrimination. The lower variability of activity patterns elicited by non-nestmate compared to nestmate colony odor might facilitate recognition of non-nestmates at the next level of the olfactory pathway. My research efforts made the colony recognition system accessible for direct neurophysiological investigations. My results show that ants can perceive their own nestmates. The neuronal representation of colony odors is distributed across AL compartments, indicating parallel processing. Surprisingly, the spatial activity patterns in response to colony are highly variable, raising the question how odor quality is coded in this system. The experimental advance presented in this thesis will be useful to gain further insights into how social insects discriminate friends and foes. Furthermore, my work will be beneficial for the research field of insect olfaction as colony recognition in social insects is an excellent model system to study the coding of odor quality and long-term memory mechanisms underlying recognition of complex, multi-component odors.},
  subject      = {Neuroethologie},
  language  = {en}
}
@phdthesis{Li2010,
  author    = {Li, Jian-Qiang},
  title     = {Modulating the expression of enzymes of isoprenoid synthesis: effects on Vgamma9Vdelta2 T cell activation and tumor cell growth},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-46388},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {This study focuses on phosphoantigen specific Vg9Vd2 T cells which only exist in human and non-human primates. This population accounts for 1\%-5\% of peripheral blood T-lymphocytes but their frequency can rise to 50\% of total blood T cells upon infection. Vg9Vd2 T cells can be activated by nonpeptide compounds with critical phosphate moieties which are termed as phosphoantigens. These include isopentenyl pyrophosphate (IPP), a key compound of isoprenoid synthesis in all organisms, and (E)-4-Hydroxy-3-methyl-but-2-enyl pyrophosphate (HMBPP), a direct precursor of IPP in DOXP pathway which only exist in eubacteria, plants, apicomplexaen parasites. Its activity as phosphoantigen is at least 1000 fold higher than that of IPP. However, direct structural evidence of phosphoantigen binding to the TCR is missing so far. Moreover, Vg9Vd2 T cells have potent anti-tumor activity e.g. against the B-cell lymphoma Daudi, whose Vg9Vd2 T cell activating properties have been suggested to result from sensing of abnormal intracellular IPP levels by the Vg9Vd2 TCR or Vg9Vd2 TCR binding to other postulated ligands such as an ectopically expressed F1-ATPase or UL-16 binding protein 4 (ULBP4). Aminobisphosphonates and alkymines were hypothesized to activate Vg9Vd2 T cells indirectly by inhibiting the IPP consuming enzyme farnysyl pyrophosphates synthesis (FPPS) although off target effects of these drugs or a direct interaction with the Vg9Vd2 TCR could not be excluded. This thesis presents new approaches for the mechanistic analysis of Vg9Vd2 T cell activation. By employing retroviral transduction of FPPS specific shRNA, it shows that specific shRNA reduces expression of FPPS and is sufficient to convert hematopoietic and non-hematopoietic tumor cell lines into Vg9Vd2 T cell activators. FPPS knockdown cells activated Vg9Vd2 T cells as measured by increased levels of CD69 and CD107a, kill of FPPS knockdown cells and induction of IFN-\&\#947; secretion. The IPP-synthesis-inhibiting drug mevastatin reduced Vg9Vd2 T cell activation by FPPS knockdown cells or aminobisphosphonate treated cells but not activation by the phosphoantigen bromohydrin pyrophosphate (BrHPP). A reduced growth of the FPPS knockdown cells has not been observed which is different to what has been reported for aminobisphosphonate treated cells. Finally, the human B-cell lymphoma RAJI has been transduced with Tetracyclin-inducible FPPS specific shRNA and proven to gain and loose the capacity to activate Vg9Vd2 TCR transductants upon doxycylin provision or removal. Another approach for the analysis of Vg9Vd2 T cell activation is Vg9Vd2 TCR transduced mouse cell lines with specificity for phosphoantigens. In contrast to the previously used Vg9Vd2 TCR transduced Jurkat cells, these cells do not present phosphoantigens, and are therefore specially suited for analysis of phosphoantigen presentation. The response of the new TCR transductants to presumed Vg9Vd2 TCR ligands/activators such as phosphoantigens, aminobisphosphonates or FPPS knockdown cells, depended strongly on the expression of a rat/mouse CD28 molecule by the transductants and its ligation by the (CD80) counter receptor on the ligand-presenting cell. The response is likely to reflect recognition of cognate Vg9Vd2 TCR antigens since mutations in the TCR-\&\#948; chain CDR2 and 3 abolished this response but activation by TCR or CD3 specific antibodies. A major difference between TCR transductants and primary gd T cells, was the lacking response of TCR transductants to Daudi or IPP. In addition their sensitivity to other soluble phosphoantigens was about 100 fold weaker than that of primary cells, stimulation of both cell type to CD80 expressing FPPS knock down or aminobisphosphonates was similar. Finally, the transductants have also been used to analyze effects of over-expression or knockdown of enzymes of isoprenoid synthesis such as 3-hydroxy-3-methyl-glutaryl-CoA reductase (HMG-CoA reductase or HMGR), mevalonate-5-pyrophosphate decarboxylase (MVD), isopentenyl pyrophosphate isomerase (IDI), geranyl-geranyl pyrophosphate synthase (GGPPS) but no clear effects have been found. In conclusion, this thesis supports the concept of Vg9Vd2 T cells being sensors of a dysregulated isoprenoid metabolism and established new tools to study ligand recognition and TCR mediated activation of this T cell population. These tools will be most useful to address following questions: 1) How does the dysregulation of isoprenoid metabolism affect tumor growth? 2) What is the correlation between the modulation of IPP levels and the Vg9Vd2 TCR binding or expression of other postulated ligands? 3) Are there any mevalonate pathway enzymes other than FPPS and HMGR, which play an important role in Vg9Vd2 T cells activation? 4) What is/are the putative phosphoantigen-presenting molecule(s)?},
  subject      = {Primaten},
  language  = {en}
}
@phdthesis{Hahn2010,
  author    = {Hahn, Tim},
  title     = {Integrating neurobiological markers of depression: an fMRI-based pattern classification approach},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-49962},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2010},
  abstract  = {While depressive disorders are, to date, diagnosed based on behavioral symptoms and course of illness, the interest in neurobiological markers of psychiatric disorders has grown substantially in recent years. However, current classification approaches are mainly based on data from a single biomarker, making it difficult to predict diseases such as depression which are characterized by a complex pattern of symptoms. Accordingly, none of the previously investigated single biomarkers has shown sufficient predictive power for practical application. In this work, we therefore propose an algorithm which integrates neuroimaging data associated with multiple, symptom-related neural processes relevant in depression to improve classification accuracy. First, we identified the core-symptoms of depression from standard classification systems. Then, we designed and conducted three experimental paradigms probing psychological processes known to be related to these symptoms using functional Magnetic Resonance Imaging. In order to integrate the resulting 12 high-dimensional biomarkers, we developed a multi-source pattern recognition algorithm based on a combination of Gaussian Process Classifiers and decision trees. Applying this approach to a group of 30 healthy controls and 30 depressive in-patients who were on a variety of medications and displayed varying degrees of symptom-severity allowed for high-accuracy single-subject classification. Specifically, integrating biomarkers yielded an accuracy of 83\% while the best of the 12 single biomarkers alone classified a significantly lower number of subjects (72\%) correctly. Thus, integrated biomarker-based classification of a heterogeneous, real-life sample resulted in accuracy comparable to the highest ever achieved in previous single biomarker research. Furthermore, investigation of the final prediction model revealed that neural activation during the processing of neutral facial expressions, large rewards, and safety cues is most relevant for over-all classification. We conclude that combining brain activation related to the core-symptoms of depression using the multi-source pattern classification approach developed in this work substantially increases classification accuracy while providing a sparse relational biomarker-model for future prediction.},
  subject      = {Patientenklassifikation},
  language  = {en}
}