TY - JOUR A1 - Eisenreich, Wolfgang A1 - Rudel, Thomas A1 - Heesemann, Jürgen A1 - Goebel, Werner T1 - Persistence of Intracellular Bacterial Pathogens—With a Focus on the Metabolic Perspective JF - Frontiers in Cellular and Infection Microbiology N2 - Persistence has evolved as a potent survival strategy to overcome adverse environmental conditions. This capability is common to almost all bacteria, including all human bacterial pathogens and likely connected to chronic infections caused by some of these pathogens. Although the majority of a bacterial cell population will be killed by the particular stressors, like antibiotics, oxygen and nitrogen radicals, nutrient starvation and others, a varying subpopulation (termed persisters) will withstand the stress situation and will be able to revive once the stress is removed. Several factors and pathways have been identified in the past that apparently favor the formation of persistence, such as various toxin/antitoxin modules or stringent response together with the alarmone (p)ppGpp. However, persistence can occur stochastically in few cells even of stress-free bacterial populations. Growth of these cells could then be induced by the stress conditions. In this review, we focus on the persister formation of human intracellular bacterial pathogens, some of which belong to the most successful persister producers but lack some or even all of the assumed persistence-triggering factors and pathways. We propose a mechanism for the persister formation of these bacterial pathogens which is based on their specific intracellular bipartite metabolism. We postulate that this mode of metabolism ultimately leads, under certain starvation conditions, to the stalling of DNA replication initiation which may be causative for the persister state. KW - persistence KW - mechanisms of persister formation KW - intracellular bacterial pathogens KW - stress conditions KW - ATP-DnaA complex KW - DNA replication initiation Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-222348 SN - 2235-2988 VL - 10 ER - TY - JOUR A1 - Hetzer, Benjamin A1 - Orth-Höller, Dorothea A1 - Würzner, Reinhard A1 - Kreidl, Peter A1 - Lackner, Michaela A1 - Müller, Thomas A1 - Knabl, Ludwig A1 - Geisler-Moroder, Daniel Rudolf A1 - Mellmann, Alexander A1 - Sesli, Özcan A1 - Holzknecht, Jeanett A1 - Noce, Damia A1 - Akarathum, Noppadon A1 - Chotinaruemol, Somporn A1 - Prelog, Martina A1 - Oberdorfer, Peninnah T1 - “Enhanced acquisition of antibiotic-resistant intestinal E. coli during the first year of life assessed in a prospective cohort study” JF - Antimicrobial Resistance & Infection Control N2 - Background Increasing bacterial resistance to antibiotics is a serious problem worldwide. We sought to record the acquisition of antibiotic-resistant Escherichia coli (E. coli) in healthy infants in Northern Thailand and investigated potential determinants. Methods Stool samples from 142 infants after birth, at ages 2wk, 2mo, 4 to 6mo, and 1y, and parent stool samples were screened for E. coli resistance to tetracycline, ampicillin, co-trimoxazole, and cefazoline by culture, and isolates were further investigated for multiresistance by disc diffusion method. Pulsed-field gel electrophoresis was performed to identify persistent and transmitted strains. Genetic comparison of resistant and transmitted strains was done by multilocus sequence typing (MLST) and strains were further investigated for extra- and intra-intestinal virulence factors by multiplex PCR. Results Forty-seven (33%) neonatal meconium samples contained resistant E. coli. Prevalence increased continuously: After 1y, resistance proportion (tetracycline 80%, ampicillin 72%, co-trimoxazole 66%, cefazoline 35%) almost matched those in parents. In 8 infants (6%), identical E. coli strains were found in at least 3 sampling time points (suggesting persistence). Transmission of resistant E. coli from parents to child was observed in only 8 families. MLST showed high diversity. We could not identify any virulence genes or factors associated with persistence, or transmission of resistant E. coli. Full-term, vaginal birth and birth in rural hospital were identified as risk factors for early childhood colonization with resistant E. coli. Conclusion One third of healthy Thai neonates harboured antibiotic-resistant E. coli in meconium. The proportion of resistant E. coli increased during the first year of life almost reaching the value in adults. We hypothesize that enhancement of infection control measures and cautious use of antibiotics may help to control further increase of resistance. KW - Escherichia coli KW - antibiotic resistance KW - multiresistance KW - transmission KW - persistence KW - children KW - neonates Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-320284 VL - 8 ER - TY - JOUR A1 - Sass, Andrea M. A1 - Van Acker, Heleen A1 - Förstner, Konrad U. A1 - Van Nieuwerburgh, Filip A1 - Deforce, Dieter A1 - Vogel, Jörg A1 - Coenye, Tom T1 - Genome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315 JF - BMC Genomics N2 - Background: Burkholderia cenocepacia is a soil-dwelling Gram-negative Betaproteobacterium with an important role as opportunistic pathogen in humans. Infections with B. cenocepacia are very difficult to treat due to their high intrinsic resistance to most antibiotics. Biofilm formation further adds to their antibiotic resistance. B. cenocepacia harbours a large, multi-replicon genome with a high GC-content, the reference genome of strain J2315 includes 7374 annotated genes. This study aims to annotate transcription start sites and identify novel transcripts on a whole genome scale. Methods: RNA extracted from B. cenocepacia J2315 biofilms was analysed by differential RNA-sequencing and the resulting dataset compared to data derived from conventional, global RNA-sequencing. Transcription start sites were annotated and further analysed according to their position relative to annotated genes. Results: Four thousand ten transcription start sites were mapped over the whole B. cenocepacia genome and the primary transcription start site of 2089 genes expressed in B. cenocepacia biofilms were defined. For 64 genes a start codon alternative to the annotated one was proposed. Substantial antisense transcription for 105 genes and two novel protein coding sequences were identified. The distribution of internal transcription start sites can be used to identify genomic islands in B. cenocepacia. A potassium pump strongly induced only under biofilm conditions was found and 15 non-coding small RNAs highly expressed in biofilms were discovered. Conclusions: Mapping transcription start sites across the B. cenocepacia genome added relevant information to the J2315 annotation. Genes and novel regulatory RNAs putatively involved in B. cenocepacia biofilm formation were identified. These findings will help in understanding regulation of B. cenocepacia biofilm formation. KW - persistence KW - genomic islands KW - pathogen KW - identification KW - bacteria KW - small RNAs KW - translation initiation KW - cepedia complex KW - global gene expression KW - SEQ KW - resistance KW - burkholderia cenocepacia KW - biofilms KW - dRNA-Seq KW - transcription start site KW - antisense RNA Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-139748 VL - 16 IS - 775 ER - TY - JOUR A1 - Ljunggren, Osten A1 - Barrett, Annabel A1 - Stoykov, Ivaylo A1 - Langdahl, Bente L. A1 - Lems, Willem F. A1 - Walsh, J. Bernard A1 - Fahrleitner-Pammer, Astrid A1 - Rajzbaum, Gerald A1 - Jakob, Franz A1 - Karras, Dimitrios A1 - Marin, Fernando T1 - Effective osteoporosis treatment with teriparatide is associated with enhanced quality of life in postmenopausal women with osteoporosis: the European Forsteo Observational Study JF - BMC Musculoskeletal Disorders N2 - Background: To describe changes in health-related quality of life (HRQoL) of postmenopausal women with osteoporosis treated with teriparatide for up to 18 months and followed-up for a further 18 months, and to assess the influence of recent prior and incident fractures. Methods: The European Forsteo Observational Study (EFOS) is an observational, prospective, multinational study measuring HRQoL using the EQ-5D. The primary objective was to assess changes in HRQoL during 36 months in the whole study population. A secondary post-hoc analysis examined fracture impact on HRQoL in four subgroups classified based on recent prior fracture 12 months before baseline and incident clinical fractures during the study. Changes from baseline were analysed using a repeated measures model. Results: Of the 1581 patients, 48.4% had a recent prior fracture and 15.6% of these patients had an incident fracture during follow-up. 10.9% of the 816 patients with no recent prior fracture had an incident fracture. Baseline mean EQ-VAS scores were similar across the subgroups. In the total study cohort (n = 1581), HRQoL (EQ-VAS and EQ-5D index scores) improved significantly from baseline to 18 months and this improvement was maintained over the 18-month post-teriparatide period. Improvements were seen across all five EQ-5D domains during teriparatide treatment that were maintained after teriparatide was discontinued. Subjects with incident clinical fractures had significantly less improvement in EQ-VAS than those without incident fractures. Recent prior fracture did not influence the change in EQ-VAS during treatment. Conclusions: EFOS is the first longitudinal study in women with severe postmenopausal osteoporosis in the real world setting to show a substantial improvement in HRQoL during teriparatide treatment that was sustained during subsequent treatment with other medications. The increase in HRQoL was lower in the subgroups with incident fracture but was not influenced by recent prior fracture. The results should be interpreted in the context of the design of an observational study. KW - fracture KW - osteoporosis KW - quality of life KW - teriparatide KW - EQ-5D KW - database KW - alendronate KW - persistence KW - metaanalysis KW - prevalent fractures KW - bone-mineral density KW - vertebral fractures KW - back pain KW - impact KW - responsiveness Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-122057 SN - 1471-2474 VL - 14 IS - 251 ER - TY - THES A1 - Staab, Charlotte T1 - Prädiktoren der Persistenz des ADHS T1 - Predictors of persistence of ADHD N2 - Die vorliegende Studie hatte das Ziel prädiktive Faktoren einer Persistenz von ADHS in das Erwachsenenalter ausfindig zu machen und den Einfluss von kindbezogenen, familiären und behandlungsbezogenen Eigenschaften auf den Verlauf und das Fortbestehen der ADHS-Symptomatik zu untersuchen. Das Untersuchungsgut bestand aus Patienten der Klinik und Poliklinik der Kinder- und Jugendpsychiatrie der Universität Würzburg. Das Gesamtkollektiv bestand aus 146 Patienten, deren Akten wir auswerteten. 67 Patienten (46%) konnten wir mittels WURS, DSM-IV-Kriterien, Anamnesebogen, SKID-I und SKID-II im Erwachsenenalter nachexplorieren. Der Katamnesezeitraum betrug ein Jahr, vom 04.11.2002 bis zum 03.11.2003. Die ehemaligen Patienten waren zum Katamnesezeitpunkt durchschnittlich 28 Jahre alt. Bei der Suche nach prädiktiven Faktoren für eine Persistenz der ADHS-Symptomatik in das Erwachsenenalter konnten wir trotz der Studien, welche die Wichtigkeit ungünstiger psychosozialer Faktoren für den Verlauf des ADHS belegen (Biederman et al 1996, Hart et al 1995, 1991c, Fischer et al 1993, Taylor et al 1991, Weiss und Hechtman 1986, Gittelman et al 1985, Hechtman et al 1984, Loney et al 1981), keine Prädiktoren einer Persistenz der ADHS-Symptomatik finden. Unsere Ergebnisse lassen sich dahingehend erklären, dass es sich beim ADHS um eine primär genetisch determinierte Störung handelt, welche in ihrem Verlauf von verschiedensten intervenierenden Faktoren beeinflusst wird. Es handelt sich um ein komplexes Zusammenspiel von zu Grunde liegenden biologischen Faktoren mit verschiedenen Gen-Umwelt-Interaktionen, ein Zusammenspiel von Individuum mit seiner Persönlichkeit und eigenen Coping-Strategien, sowie der Art des Umfeldes und deren Reaktion auf das Verhalten des Betroffenen. Daher besteht keine Möglichkeit den Verlauf von ADHS anhand von Eigenschaften, welche zu einem einzigen Zeitpunkt (bei Erstvorstellung) erfasst wurden vorherzusagen. In unserer Stichprobe wurde eine Achse-I-Diagnose bei der Hälfte der mit dem SKID-I-Interview nachuntersuchten Probanden gestellt. Entsprechend unserer Annahme, dass Erwachsene mit vielen Symptomen des ADHS einen ungünstigeren Verlauf mit mehr Achse-I-Störungen nehmen, fanden sich diese Störungen zu etwa zwei Dritteln bei den Erwachsenen mit mehr als 6 fortbestehenden Symptomen des ADHS, während kein Erwachsener ohne Symptome des ADHS eine Achse-I-Diagnose hatte. Bei 61% (n=36) der mit dem SKID-II-Interview nachexplorierten Patienten wurde die Diagnose einer Persönlichkeitsstörung gestellt. Am häufigsten fanden sich die Diagnosen einer dissozialen (21%), einer selbstunsicher-vermeidenden (21%), einer negativistischen (18%), einer narzisstischen (14%) und einer emotional–instabilen Persönlichkeitsstörung (9%). Bemerkenswert ist, dass sich keiner der Erwachsenen unserer Studie aktuell in psychiatrischer Behandlung befand. Dies steht im Kontrast zu der meist fortbestehenden Restsymptomatik des ADHS und der hohen Rate komorbider Achse-I- und Achse-II-Störungen, welche mit psychosozialen Beeinträchtigungen einhergehen. Eine kontinuierliche, über das Kindesalter hinausreichende Betreuung von Patienten mit ADHS, sowie eine ausführliche Aufklärung könnten einem solchen ungünstigen Verlauf entgegenwirken. Eine adäquate Behandlung Erwachsener mit ADHS ist nur möglich, wenn Komorbiditäten berücksichtigt und gleichzeitig mitbehandelt werden. Weitere epidemiologische und neurobiologische Studien mit einem größeren Kollektiv sind notwendig zum Auffinden von Einflussfaktoren auf den Verlauf des ADHS und zur Klärung der Komorbiditätsbeziehungen des ADHS. N2 - Aim of the following study was the finding of predictors of persistence of ADHD into adulthood. Therefore we examined patients who were diagnosed an ADHD in childhood at a mean age of 28 years. Patients were interviewed for actual social function, psychiatric and personality disorders. Persistence of symptoms into adulthood could not be predicted with childhood attributes. This confirms the strong influence of genetics in persistent ADHD as well as the influence of environmental and social factors. More than 50% of the interviewed patients got a psychiatric diagnosis and more than 60% a personality disorder. Most of the patients showed significant social problems but none of them actually was in psychiatric care. This confirms the need of an adequate diagnosis and treatment not only in children but also in adults. KW - ADHS KW - Erwachsenenalter KW - Prädiktoren KW - Peristenz KW - ADHD KW - adults KW - adulthood KW - predictors KW - persistence Y1 - 2006 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-22424 ER -