TY - JOUR A1 - Stebani, Jannik A1 - Blaimer, Martin A1 - Zabler, Simon A1 - Neun, Tilmann A1 - Pelt, Daniël M. A1 - Rak, Kristen T1 - Towards fully automated inner ear analysis with deep-learning-based joint segmentation and landmark detection framework JF - Scientific Reports N2 - Automated analysis of the inner ear anatomy in radiological data instead of time-consuming manual assessment is a worthwhile goal that could facilitate preoperative planning and clinical research. We propose a framework encompassing joint semantic segmentation of the inner ear and anatomical landmark detection of helicotrema, oval and round window. A fully automated pipeline with a single, dual-headed volumetric 3D U-Net was implemented, trained and evaluated using manually labeled in-house datasets from cadaveric specimen (N = 43) and clinical practice (N = 9). The model robustness was further evaluated on three independent open-source datasets (N = 23 + 7 + 17 scans) consisting of cadaveric specimen scans. For the in-house datasets, Dice scores of 0.97 and 0.94, intersection-over-union scores of 0.94 and 0.89 and average Hausdorf distances of 0.065 and 0.14 voxel units were achieved. The landmark localization task was performed automatically with an average localization error of 3.3 and 5.2 voxel units. A robust, albeit reduced performance could be attained for the catalogue of three open-source datasets. Results of the ablation studies with 43 mono-parametric variations of the basal architecture and training protocol provided task-optimal parameters for both categories. Ablation studies against single-task variants of the basal architecture showed a clear performance beneft of coupling landmark localization with segmentation and a dataset-dependent performance impact on segmentation ability. KW - anatomy KW - bone imaging KW - diagnosis KW - medical imaging KW - software KW - three-dimensional imaging KW - tomography Y1 - 2023 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-357411 VL - 13 ER - TY - JOUR A1 - Sherif, Mohammad A. A1 - Ince, Hüseyin A1 - Maniuc, Octavian A1 - Reiter, Therese A1 - Voelker, Wolfram A1 - Ertl, Georg A1 - Öner, Alper T1 - Two-dimensional transesophageal echocardiography for aortic annular sizing in patients undergoing transcatheter aortic valve implantation JF - BMC Cardiovascular Disorders N2 - Background: Accurate preoperative assessment of the aortic annulus dimension is crucial for successful transcatheter aortic valve implantation (TAVI). In this study we examined the accuracy of a novel method using two-dimensional transesophageal echocardiography (2D-TEE) for measurement of the aortic annulus. Methods: We evaluated the theoretical impact of the measurement of the annulus diameter and area using the circumcircle of a triangle method on the decision to perform the procedure and choice of the prosthesis size. Results: Sixty-three consecutive patients were scheduled for TAVI. Mean age was 82 +/- 4 years, and 25 patients (55.6 %) were female. Mean aortic annulus diameter was 20.3 +/- 2.2 mm assessed by TEE on the mid-esophageal long-axis view and 23.9 +/- 2.3 mm using CT (p < 0.001). There was a tendency for the TEE derived areas using the new method to be higher (p < 0.001). The TEE measurements were on average 42.33 mm(2) higher than the CT measurements without an evidence of a systematic over-or under-sizing (p = 1.00). Agreement between TEE and CT chosen valve sizes was good overall (kappa = 0.67 and weighted kappa = 0.71). For patients who turned out to have no AR, the two methods agreed in 84.6 % of patients. Conclusions: CT remanis the gold standard in sizing of the aortic valve annulus. Nevertheless, sizing of the aortic valve annulus using TEE derived area may be helpful. The impact of integration of this method in the algorithm of aortic annulus sizing on the outcome of patients undergoing TAVI should be examined in future studies. KW - multicenter KW - TAVI KW - impact KW - complex KW - anatomy KW - dimensions KW - regurgitation KW - root KW - sizing KW - echocardiography KW - multidetector computed-tomography KW - replacement KW - outcomes Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-136002 VL - 15 IS - 181 ER - TY - JOUR A1 - Moll, Corinna A1 - Reboredo, Jenny A1 - Schwarz, Thomas A1 - Appelt, Antje A1 - Schürlein, Sebastian A1 - Walles, Heike A1 - Nietzer, Sarah T1 - Tissue Engineering of a Human 3D in vitro Tumor Test System JF - Journal of Visualized Experiments N2 - Cancer is one of the leading causes of death worldwide. Current therapeutic strategies are predominantly developed in 2D culture systems, which inadequately reflect physiological conditions in vivo. Biological 3D matrices provide cells an environment in which cells can self-organize, allowing the study of tissue organization and cell differentiation. Such scaffolds can be seeded with a mixture of different cell types to study direct 3D cell-cell-interactions. To mimic the 3D complexity of cancer tumors, our group has developed a 3D in vitro tumor test system. Our 3D tissue test system models the in vivo situation of malignant peripheral nerve sheath tumors (MPNSTs), which we established with our decellularized porcine jejunal segment derived biological vascularized scaffold (BioVaSc). In our model, we reseeded a modified BioVaSc matrix with primary fibroblasts, microvascular endothelial cells (mvECs) and the S462 tumor cell line For static culture, the vascular structure of the BioVaSc is removed and the remaining scaffold is cut open on one side (Small Intestinal Submucosa SIS-Muc). The resulting matrix is then fixed between two metal rings (cell crowns). Another option is to culture the cell-seeded SIS-Muc in a flow bioreactor system that exposes the cells to shear stress. Here, the bioreactor is connected to a peristaltic pump in a self-constructed incubator. A computer regulates the arterial oxygen and nutrient supply via parameters such as blood pressure, temperature, and flow rate. This setup allows for a dynamic culture with either pressure-regulated pulsatile or constant flow. In this study, we could successfully establish both a static and dynamic 3D culture system for MPNSTs. The ability to model cancer tumors in a more natural 3D environment will enable the discovery, testing, and validation of future pharmaceuticals in a human-like model. KW - bioengineering KW - biomedical engineering KW - tissue engineering KW - biotechnology KW - cultured KW - tumor cells KW - cell culture KW - 3D in vitro models KW - bioreactor KW - dynamic culture conditions KW - tumor test system KW - primary cell isolation KW - BioVaSc KW - decellularization KW - equipment and supplies KW - cellular microenvironment KW - culture techniques KW - cell engineering KW - anatomy KW - physiology KW - molecular biology KW - cellular biology Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-132277 UR - http://www.jove.com/video/50460 VL - 78 IS - e50460 ER - TY - JOUR A1 - Jordan, Martin C. A1 - Jäckle, Veronika A1 - Scheidt, Sebastian A1 - Gilbert, Fabian A1 - Hölscher-Doht, Stefanie A1 - Ergün, Süleyman A1 - Meffert, Rainer H. A1 - Heintel, Timo M. T1 - Trans-obturator cable fixation of open book pelvic injuries JF - Scientific Reports N2 - Operative treatment of ruptured pubic symphysis by plating is often accompanied by complications. Trans-obturator cable fixation might be a more reliable technique; however, have not yet been tested for stabilization of ruptured pubic symphysis. This study compares symphyseal trans-obturator cable fixation versus plating through biomechanical testing and evaluates safety in a cadaver experiment. APC type II injuries were generated in synthetic pelvic models and subsequently separated into three different groups. The anterior pelvic ring was fixed using a four-hole steel plate in Group A, a stainless steel cable in Group B, and a titan band in Group C. Biomechanical testing was conducted by a single-leg-stance model using a material testing machine under physiological load levels. A cadaver study was carried out to analyze the trans-obturator surgical approach. Peak-to-peak displacement, total displacement, plastic deformation and stiffness revealed a tendency for higher stability for trans-obturator cable/band fixation but no statistical difference to plating was detected. The cadaver study revealed a safe zone for cable passage with sufficient distance to the obturator canal. Trans-obturator cable fixation has the potential to become an alternative for symphyseal fixation with less complications. KW - anatomy KW - medical research Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-261212 VL - 11 IS - 1 ER - TY - JOUR A1 - Drenckhahn, Detlev A1 - Drenckhahn, Helga T1 - Trifolium micranthum Viv. an Nordseedeichen von Schleswig-Holstein – Charakterisierung der Pflanzen und ihrer Habitate, Status in Deutschland und Nachbargebieten T1 - Trifolium micranthum Viv. at the North Sea dikes of Schleswig-Holstein – characterization of plants and their habitats, status in Germany and neighbouring countries JF - Forum Geobotanicum N2 - In der vorliegenden Arbeit wird ein neues Teilareal von T. micranthum mit zahlreichen Vorkommen an den Nordseedeichen von Schleswig-Holstein zwischen der Elbeästuar und der Insel Nordstrand mit Schwerpunkt auf der Halbinsel Eiderstedt mitgeteilt, das geographisch zwischen dem Vorkommen in den Niederlanden und dem Ostsee-Areal in Dänemark vermittelt. Es handelt sich um die einzigen weitgehend naturnahen Wuchsorte der Art in Deutschland. Die anderen beiden aktuellen deutschen Vorkommen befinden sich auf Friedhöfen in Nordrhein-Westfalen. T. micranthum wächst bevorzugt an den steilen und artenreicheren Innenböschungen der Seedeiche, deren Vegetation durch intensive Schafbeweidung und Trittspuren kurz und lückig gehalten wird. Die Beweidung bewirkt eine signifikante Größenreduktion (Miniaturisierung) verschiedener Pflanzenteile. Widersprüchliche Angaben zu bestimmungskritischen Merkmalen werden durch morphometrische Untersuchungen überprüft. Unter anderem beträgt die Länge der Blütenstiele 0,6–1,1 mm (im Mittel 0,8 mm) und die Blüten mit Kelch sind deutlich unter 3 mm lang (im Mittel 2,4 mm). Die Zahl der Blüten der Infloreszenz beträgt (1)2–6(8). Eine graphische Darstellung soll bei Artbestimmung und Auffinden neuer Wuchsorte behilflich sein. N2 - A new distribution area with numerous growth sites of Trifolium micranthum has been discovered at the sea dikes of the North Sea coast of Schleswig-Holstein in Germany between the estuary of river Elbe and the island of Nordstrand with main occurrence on the peninsula Eiderstedt. Geographically this area links the Dutch population with the West Baltic population in Denmark and is the only semi natural growth site of this tiny clover in Germany. The other current growth sites in Germany are located on cemeteries in Nordrhein-Westfalen. T. micranthum prefers the steep inner slopes of sea dikes (30% gradient) with their higher diversity of vegetation and open ground sites created by grazing and tracks of sheep. Grazing creates significant reduction of the size of various parts of the clover (miniaturization). The paper also provides morphometric data on distinguishing features that are controversially treated in the literature, e.g. the length of pedicels with 0.6–1.1 mm (mean 0.8 mm), flower size (corolla with calyx) below 3 mm (mean 2.4 mm) and number of flowers per inflorescence of (1)2–6(8). A drawing of T. micranthum is provided that may help to discover new growth sites. KW - Trifolium micranthum KW - distribution range KW - Klee KW - anatomy KW - ecology KW - Trifolium dubium Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-159163 UR - http://www.forum-geobotanicum.net/articles/vol_8-2018/drenckhahn_trifolium/drenckhahn-drenckhahn_Trifolium_micranthum.pdf SN - 1867-9315 VL - 8 ER - TY - JOUR A1 - Boelch, S. P. A1 - Jansen, H. A1 - Meffert, R. H. A1 - Frey, S. P. T1 - Six Sesamoid Bones on Both Feet: Report of a Rare Case JF - Journal of Clinical and Diagnostic Research N2 - There is a variation of the total number of distinct bones in the human in the literature. This difference is mainly caused by the variable existence of sesamoid bones. Sesamoid bones at the first MTP are seen regularly. In contrast additional sesamoid bones at the divond to fifth MTP are rare. We report a case of additional sesamoid bones at every metatarsophalangeal joint (MTP) of both feet. A 22-year-old female Caucasian presented with weight-dependent pain of the divond MTP of the left foot. In the radiographs of both feet additional sesamoid bones at every MTP could be seen. This case reports a very rare variation in human anatomy. A similar case has not been displayed to the academic society and therefore should be acknowledged. KW - anatomy KW - genetics KW - variation Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-126073 VL - 9 IS - 8 ER -