TY  - JOUR
A1  - Lukeš, Tomáš
A1  - Glatzová, Daniela
A1  - Kvíčalová, Zuzana
A1  - Levet, Florian
A1  - Benda, Aleš
A1  - Letschert, Sebastian
A1  - Sauer, Markus
A1  - Brdička, Tomáš
A1  - Lasser, Theo
A1  - Cebecauer, Marek
T1  - Quantifying protein densities on cell membranes using super-resolution optical fluctuation imaging
JF  - Nature Communications
N2  - Quantitative approaches for characterizing molecular organization of cell membrane molecules under physiological and pathological conditions profit from recently developed super-resolution imaging techniques. Current tools employ statistical algorithms to determine clusters of molecules based on single-molecule localization microscopy (SMLM) data. These approaches are limited by the ability of SMLM techniques to identify and localize molecules in densely populated areas and experimental conditions of sample preparation and image acquisition. We have developed a robust, model-free, quantitative clustering analysis to determine the distribution of membrane molecules that excels in densely labeled areas and is tolerant to various experimental conditions, i.e. multiple-blinking or high blinking rates. The method is based on a TIRF microscope followed by a super-resolution optical fluctuation imaging (SOFI) analysis. The effectiveness and robustness of the method is validated using simulated and experimental data investigating nanoscale distribution of CD4 glycoprotein mutants in the plasma membrane of T cells.
KW  - biology
KW  - fluorescence imaging
KW  - imaging the immune system
KW  - super-resolution microscopy
Y1  - 2017
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-172993
VL  - 8
ER  - 
TY  - JOUR
A1  - Trinks, Nora
A1  - Reinhard, Sebastian
A1  - Drobny, Matthias
A1  - Heilig, Linda
A1  - Löffler, Jürgen
A1  - Sauer, Markus
A1  - Terpitz, Ulrich
T1  - Subdiffraction-resolution fluorescence imaging of immunological synapse formation between NK cells and A. fumigatus by expansion microscopy
JF  - Communications Biology
N2  - Expansion microscopy (ExM) enables super-resolution fluorescence imaging on standard microscopes by physical expansion of the sample. However, the investigation of interactions between different organisms such as mammalian and fungal cells by ExM remains challenging because different cell types require different expansion protocols to ensure identical, ideally isotropic expansion of both partners. Here, we introduce an ExM method that enables super-resolved visualization of the interaction between NK cells and Aspergillus fumigatus hyphae. 4-fold expansion in combination with confocal fluorescence imaging allows us to resolve details of cytoskeleton rearrangement as well as NK cells' lytic granules triggered by contact with an RFP-expressing A. fumigatus strain. In particular, subdiffraction-resolution images show polarized degranulation upon contact formation and the presence of LAMP1 surrounding perforin at the NK cell-surface post degranulation. Our data demonstrate that optimized ExM protocols enable the investigation of immunological synapse formation between two different species with so far unmatched spatial resolution.
KW  - biological fluorescence
KW  - fluorescence imaging
KW  - imaging the immune system
KW  - infectious diseases
KW  - super-resolution microscopy
Y1  - 2021
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-264996
VL  - 4
IS  - 1
ER  -