TY - THES A1 - Liu, Yang T1 - Predictions for Composite Higgs Models Using Gauge/Gravity Duality T1 - Vorhersagen für zusammengesetzte Higgs-Modelle unter Verwendung der Eich-/Gravitationsdualität N2 - This thesis is dedicated to construct a non-abelian holographic dynamical minimal composite Higgs model. We first build a non-abelian bottom-up AdS/YM model that can explain the QCD meson spectrum well. The model is made non-abelian by considering non-abelian DBI action in the top-down model. We then change the dual theory from the QCD to the minimal composite Higgs model U (4)/Sp(4). By adding a second explicit U (4) → Sp(4) breaking through the NJL interaction at the boundary, we managed to construct a composite Higgs phase and a technicolor phase in this model. The transition between the two phases is also realized, which is controlled by the NJL coupling. This thesis is based on the works [1, 2]. N2 - Diese Arbeit konstruiert ein nicht-abelsches holographisches dynamisches minimales Composite-Higgs-Modell. Wir erstellen zunächst ein nicht-abelsches Bottom-up-AdS/YM-Modell, das das QCD-Mesonenspektrum gut erklären kann. Das Modell ist nicht-abelsch, da die nicht-abelsche DBI-Wirkung im Top-Down-Modell berücksichtigt wird. Anschließend ändern wir die duale Theorie von der QCD auf das minimale Composite-Higgs-Modell U (4)/Sp(4). Durch das Hinzufügen einer zweiten expliziten Brechung U (4) → Sp(4), das die NJL-Wechselwirkung an der Grenze durchbricht, konstruierten wir in diesem Modell eine Composite-Higgs-Phase und eine Technicolor-Phase. Auch der Übergang zwischen den beiden Phasen wird realisiert, welcher durch die NJL-Kopplung gesteuert wird. Diese Arbeit basiert auf den Arbeiten [1, 2]. KW - Composite Higgs KW - Gauge/gravity duality KW - holographic model KW - Higgs-Modell Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370833 ER - TY - THES A1 - Rode, Stefan T1 - Automated resummation of electroweak Sudakov logarithms in diboson production T1 - Automatisierte Resummierung elektroschwacher Sudakov-Logarithmen in Vektorboson-Paarproduktion N2 - The present thesis is concerned with the automated computation of integrated and differential cross sections of diboson production in proton–proton and electron–positron collisions at very high energies, including a resummation of electroweak Sudakov logarithms to all orders in the fine-structure constant using soft–collinear effective theory. The search for new physics at future colliders such as the FCC–hh or the CLIC requires precise predictions for scattering cross sections from the theoretical high-energy physics com- munity. Electroweak Sudakov logarithms, which currently limit the accuracy of predictions in the high-energy tails of differential distributions for LHC-like energies, are known to destroy the convergence behaviour of the fixed-order perturbative series, once sufficiently high energies are considered. To resum these large corrections, soft–collinear effective theory has been applied to simple processes, which permits analytic calculations. Within this work, we present an automated computation within a Monte Carlo integration framework, thus facilitating the computation of fully differential cross section to complicated processes. This requires the use of the Catani– Seymour subtraction algorithm to treat the occurring infrared divergences. The machinery is applied to all diboson processes with intermediate weak gauge bosons, including the photon- induced W+ W− -production channel. To this end we carefully study the validity of the necessary assumptions such as the double- pole approximation and estimate the order of magnitude of neglected effects. Especially the non-doubly-resonant contributions turn out to be sizeable in several interesting phase-space regions. For lepton collisions at 3 TeV we obtain the integrated cross sections of W-pair and Z-pair production to be shifted by more than 20% with respect to the Born value, owing to the resum- mation of the leading-logarithmic corrections These effects are partly cancelled by subleading effects. For proton–proton collisions at √ s = 100 TeV we observe sizeable resummation effects in the high-energy tails, while the integrated cross sections are dominated by interactions, for which soft–collinear effective theory is not applicable. N2 - Das Thema ist der vorliegenen Arbeit ist die automatisierte Berechnung differenzieller und integrierter Wirkungsquerschnitte der Paarerzeugung schwerer Eichbosonen bei sehr hohen Streuenergien mit Resummierung der auftretenden elektroschwachen Sudakov-Logarithmen zu allen Ordnungen in der Feinstrukturkonstanten mittels Soft-Collinear Effective Theory. Die Suche nach Physik jenseits des Standardmodells an zukunftigen Teilchenbeschleunigern wie dem FCC oder dem CLIC erfordert hochpräzise Voraussagen fur Streuquerschnitte seitens der theoretischen Physik. Es ist seit langem bekannt, dass elektroschwache Sudakov-Logarithmen, die bereits gegenwärtig die Genauigkeit der Voraussagen in den Hochenergieschwänzen von Verteilungen limitieren, die Konvergenz der konventionellen Störungsreihen vollkommen zunichte machen, wenn hinreichend hohe Energien erreicht werden. Mittels Soft-Collinear Effective Theory wurden diese Logarithmen bereits in der Vergangenheit in einfachen Prozessen, die eine analytische Behandlung erlauben, resummiert. Im Rahmen dieser Arbeit wurden diese Methoden in ein Monte-Carlo-Integrationsprogramm implementiert, um somit vollständig differenzielle Vorhersagen präsentieren zu können. Dies erfordert die Behandlung von Infrarotdivergenzen mit Hilfe des Catani-Seymour-Algorithmus. Mit diesen Werkzeugen wurden resummierte Streuquerschnitte fur verschiedene Vektorboson-Paarproduktionsprozesse berechnet, u.a. fur den Photon-Photon-induzierten Produktionskanal zur W-Boson-Paarproduktion. Auf dem Weg dorthin sind verschiedene vereinfachende Annahmen notwendig, deren Gultigkeit im Rahmen dieser Arbeit ebenfalls getestet wurde, so z.B. die Qualität der Doppelpolnäherung. Des weiteren wurden Größenordnungen vernachlässigter Effekte abgeschätzt. Dabei haben sich vor allem nicht doppelt resonante Beiträge in bestimmten Phasenraumregionen als beträchtlich herausgestellt. Der Resummationseffekt der fuhrend logarithmischen Korrekturen verschiebt die integrierten Paarproduktionsstreuquerschnitte um mehr als 20% bezogen auf den Bornstreuquerschnitt im Falle von Leptonkollisionen bei einer Schwerpunktsenergie von 3 TeV. Diese Effekte werden allerdings teilweise von nicht-führenden Beiträgen kompensiert. Fur Proton-Proton-Kollisionen bei √ s = 100 TeV finden wir deutliche Resummationseffekte in allen Hochenergieschwänzen, während die integrierten Wirkungsquerschnitte von Phasenraumregionen dominiert werden, in denen Soft-Collinear Effective Theory nicht anwendbar ist. KW - High-energy physics Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-371060 ER - TY - THES A1 - Lechermeier, Carina T1 - Neuroanatomical and functional evaluation of ADHD candidate genes in the model organism zebrafish (\(Danio\) \(rerio\)) T1 - Neuroanatomische und funktionelle Auswertung von ADHS Kandidatengenen im Modellorganismus Zebrafisch (\(Danio\) \(rerio\)) N2 - Attention deficit hyperactivity disorder (ADHD) is one of the most prevalent developmental disorders, affecting 5.9% children and adolescents and 2.5% adults worldwide. The core characteristics are age-inappropriate levels of hyperactivity, impulsivity and inattention, often accompanied by co-morbidities such as mood and conduct disorders as wells as learning deficits. In the majority of cases, ADHD is caused by an interplay of accumulated genetic and environmental risk factors. Twin studies report a very high heritability of 70–80%, however, common genetic variants in the population only explain a third of the heritability. The rest of the genetic predisposition is composed of rare copy number variations (CNVs) and gene x environment interactions including epigenetic alterations. Through genome wide association (GWAS) and linkage studies a number of likely candidate genes were identified. A handful of them play a role in dopamine or noradrenaline neurotransmitter systems, simultaneously those systems are the main targets of common drug treatment approaches. However, for the majority of candidates the biological function in relation to ADHD is unknown. It is crucial to identify those functions in order to gain a deeper understanding of the pathomechanism and genetic networks potentially responsible for the disorder. This work focuses on the three candidate genes GFOD1, SLC2A3 and LBX1 and their role in the healthy organism as well as in case of ADHD. The neuroanatomy was regarded through expression analysis and various behavioural assays of activity were performed to link alterations on the transcript level to phenotypes associated with the neurodevelopmental disorder. Zebrafish orthologues of the human risk genes were identified and extensive temporal and spacial expression characterisation performed via RNA in situ hybridisation. Through morpholino derived knock-down and mRNA overexpression zebrafish models with subsequent behavioural analysis, both hyper- and hypoactive phenotypes were discovered. Additional expression analysis through double in situ hybridisation revealed a co-localisation during zebrafish neurodevelopment of each gfod1 and slc2a3a together with gad1b, a marker for GABAergic neurons. Interestingly, both risk genes have previously been associated with glucose homeostasis and energy metabolism, which when disrupted could lead to alterations in signal transduction and neuron survival. Likewise, Lbx1 plays a pivotal role in GABAergic versus glutamatergic neuron specification during spinal cord and hindbrain development in mice and chicken. Preliminary results of this work suggest a similar role in zebrafish. Taken together, those findings on the one hand represent a sturdy basis to con- tinue studies of the function of the genes and on the other hand open up the opportunity to investigate novel aspects of ADHD research by exploring the role of the GABAergic neurotransmitter system or the connection between energy metabolism and psychiatric disorders. N2 - Die Aufmerksamkeitsdefizit-/Hyperaktivitätsstörung (ADHS) ist eine der am weitesten verbreiteten Entwicklungsstörungen, davon sind 5,9% Kinder und Jugendliche und 2,5% Erwachsene weltweit betroffen. Die Kernsymptome sind altersunangemessene Hyperaktivität, Impulsivität und Unaufmerksamkeit, oft begleitet von Begleiterkrankungen wie emotionale Dysregulation oder Verhal- tensauffälligkeiten sowie Lerndefiziten. In den meisten Fällen wird ADHS durch ein Zusammenspiel von angehäuften genetischen und umweltbedingten Risikofaktoren verursacht. Durch Zwillingsstudien gelang man zu einer errechneten Erblichkeit von 70–80%, jedoch erklären häufig auftretende genetische Varianten in der Bevölkerung nur ein Drittel der Erblichkeit. Der Rest der genetischen Veranlagung setzt sich aus seltenen Kopienzahlvariationen (CNV) und Interaktionen von Gen x Umwelt, einschließlich epigenetischer Veränderungen, zusammen. Durch genomweite Assoziationsstudien (GWAS) und Kopplungsanalysen wurden eine Reihe von wahrscheinlichen Kandidatengenen identifiziert. Eine Handvoll von ihnen spielen eine Rolle in den Dopamin oder Noradrenalin Neurotransmittersystemen. Diese Systeme sind gleichzeitig die Hauptangriffspunkte der gängigsten Medikamente, die zur Behandlung von ADHS eingesetzt werden. Allerdings ist für die Mehrheit der Kandidatengene die biologische Funktion in Bezug auf ADHS unbekannt. Es ist essentiell diese Funktionen zu identifizieren um ein tieferes Verständnis der Ätiopathogenese und der genetische Netzwerke, die möglicherweise für die Störung verantwortlich sind, zu erlangen. Diese Arbeit konzentriert sich auf die drei Kandidatengene GFOD1, SLC2A3 und LBX1 und ihre Rolle im gesunden Organismus sowie während ADHS. Die Neuroanatomie wurde durch Expressionsanalyse betrachtet und verschiedene aktivitätsbasierte Verhaltensessays wurden durchgeführt, um Veränderungen auf Transkriptebene mit den zugehörigen Phänotypen der neurologischen Entwick- lungsstörung in Verbindung zu bringen. Zebrafischorthologe der menschlichen Kandidatengene wurden identifiziert und umfangreiche zeitliche und räumli- che Expressionsanalysen via RNA in situ Hybridisierung durchgeführt. Durch Morpholino-Knockdown und mRNA-Überexpressions Zebrafischmodelle mit anschließender Verhaltensanalyse wurden sowohl hyper- als auch hypoaktive Phänotypen entdeckt. Eine zusätzliche Expressionsanalyse durch doppelte in situ Hybridisierung ergab eine Kolokalisierung während der Zebrafischneuroentwicklung von jeweils gfod1 und slc2a3a zusammen mit gad1b, einem Marker für GABAerge Neuronen. Interessanterweise wurden beide Risikogene zuvor mit der Glukosehomöostase und dem Energiestoffwechsel in Verbindung gebracht, die, wenn sie gestört werden, zu Veränderungen der Signalübertragung und der Lebensdauer von Neuronen führen können. Desgleichen spielt Lbx1 eine entscheidende Rolle bei der Spezifikation von GABAergen versus glutamatergenen Neuronen während der Entwicklung des Rückenmarks in der Wirbelsäule und im Hinterhirn von Mäusen und Hühnern. Vorläufige Ergebnisse dieser Arbeit deuten auf eine ähnliche Rolle beim Zebrafisch hin. Zusammengenommen stellen diese Erkenntnisse einerseits eine solide Grundlage für weitere Untersuchungen zur Funktion der Gene dar, andererseits eröffnet sich daraus die Möglichkeit neue Aspekte der ADHS-Forschung zu untersuchen, bei denen der Fokus auf der Rolle des GABAergen Neurotransmittersystems oder der Beziehung zwischen Energiestoffwechsel und psychiatrischen Erkrankungen liegt. KW - Aufmerksamkeitsdefizit-Syndrom KW - Zebrabärbling KW - ADHD KW - zebrafish KW - genes KW - behaviour KW - ADHS Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-371084 ER - TY - JOUR A1 - Zhang, Zishuai A1 - Ye, Siyu A1 - Gbureck, Uwe A1 - Barralet, Jake E. A1 - Merle, Géraldine T1 - Cavitation Mediated 3D Microstructured Architectures from Nanocarbon JF - Advanced Functional Materials N2 - Here, the formation of high surface area microscale assemblies of nanocarbon through phosphate and ultrasound cavitation treatment is reported. Despite high conductivity and large surface area, potential health and safety concerns limit the use of nanocarbon and add challenges to handling. Previously, it is shown that phosphate ultrasonic bonding is ineffective for organic materials but in this study, it is found that by a preliminary oxidizing treatment, several carbons can be readily assembled from xerogels. Assembling nanocarbon into microparticles can usually require a binder or surfactants, which can reduce surface area or conductivity and generate a low microsphere yield. Carbon nanotube microspheres are nitrogen-doped and flower-like nanostructured Pt deposited on their surface, and finally showcased as efficient cathode electrocatalysts for the oxygen reduction reaction (half-wave potential 0.78 V vs reversible hydrogen electrode) and methanol oxidation (417 mA mg−1). In particular, no significant degradation of the catalysts is detected after 12 000 cycles (26.6 h). These results indicate the potential of this multimaterial assembly method and open a new way to improve handling of nanoscale materials. KW - carbon nanotube microspheres KW - cavitation KW - oxygen reduction reaction KW - platinum nanostructures Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233926 VL - 28 ER - TY - JOUR A1 - McMaster, Rebecca A1 - Hoefner, Christiane A1 - Hrynevich, Andrei A1 - Blum, Carina A1 - Wiesner, Miriam A1 - Wittmann, Katharina A1 - Dargaville, Tim R. A1 - Bauer-Kreisel, Petra A1 - Groll, Jürgen A1 - Dalton, Paul D. A1 - Blunk, Torsten T1 - Tailored Melt Electrowritten Scaffolds for the Generation of Sheet-Like Tissue Constructs from Multicellular Spheroids JF - Advanced Healthcare Materials N2 - Melt electrowriting (MEW) is an additive manufacturing technology that is recently used to fabricate voluminous scaffolds for biomedical applications. In this study, MEW is adapted for the seeding of multicellular spheroids, which permits the easy handling as a single sheet-like tissue-scaffold construct. Spheroids are made from adipose-derived stromal cells (ASCs). Poly(ε-caprolactone) is processed via MEW into scaffolds with box-structured pores, readily tailorable to spheroid size, using 13–15 µm diameter fibers. Two 7–8 µm diameter “catching fibers” near the bottom of the scaffold are threaded through each pore (360 and 380 µm) to prevent loss of spheroids during seeding. Cell viability remains high during the two week culture period, while the differentiation of ASCs into the adipogenic lineage is induced. Subsequent sectioning and staining of the spheroid-scaffold construct can be readily performed and accumulated lipid droplets are observed, while upregulation of molecular markers associated with successful differentiation is demonstrated. Tailoring MEW scaffolds with pores allows the simultaneous seeding of high numbers of spheroids at a time into a construct that can be handled in culture and may be readily transferred to other sites for use as implants or tissue models. KW - 3D printing KW - additive manufacturing KW - adipose tissue engineering Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-223921 VL - 8 ER - TY - JOUR A1 - Selcuk, Nalan Alan A1 - Toklu, Turkay A1 - Beykan, Seval A1 - Karaaslan, Serife Ipek T1 - Evaluation of the dosimetry approaches in ablation treatment of thyroid cancer JF - Journal of Applied Clinical Medical Physics N2 - In this study, we aimed to evaluate dosimetric approaches in ablation treatment of Differentiated Thyroid Carcinoma (DTC) without interrupting the clinical routine. Prior to therapy, 10.7 MBq 131I in average was orally given to 24 patients suffering from DTC. MIRD formalism was used for dosimetric calculations. For blood and bone marrow dosimetry, blood samples and whole-body counts were collected at 2, 24, 72, and 120 h after I-131 administration. For remnant tissue dosimetry, uptake measurements were performed at the same time intervals. To estimate the remnant volume, anterior and lateral planar gamma camera images were acquired with a reference source within the field of view at 24 h after I-131 administration. Ultrasound imaging was also performed. Treatment activities determined with the fixed activity method were administered to the patients. Secondary cancer risk relative to applied therapy was evaluated for dosimetric approaches. The average dose to blood and bone marrow were determined as 0.15 ± 0.04 and 0.11 ± 0.04 Gy/GBq, respectively. The average remnant tissue dose was 0.58 ± 0.52 Gy/MBq and the corresponding required activity to ablate the remnant was approximately 1.3 GBq of 131I. A strong correlation between 24th-hour uptake and time-integrated activity coefficient values was obtained. Compared to fixed activity method, approximately five times higher secondary cancer risk was determined in bone marrow dosimetry, while the risk was about three times lower in lesion-based dosimetry. KW - bone marrow dosimetry KW - remnant tissue dosimetry KW - thyroid ablation treatment Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-235882 VL - 19 ER - TY - JOUR A1 - Göttlich, Claudia A1 - Kunz, Meik A1 - Zapp, Cornelia A1 - Nietzer, Sarah L. A1 - Walles, Heike A1 - Dandekar, Thomas A1 - Dandekar, Gudrun T1 - A combined tissue-engineered/in silico signature tool patient stratification in lung cancer JF - Molecular Oncology N2 - Patient-tailored therapy based on tumor drivers is promising for lung cancer treatment. For this, we combined in vitro tissue models with in silico analyses. Using individual cell lines with specific mutations, we demonstrate a generic and rapid stratification pipeline for targeted tumor therapy. We improve in vitro models of tissue conditions by a biological matrix-based three-dimensional (3D) tissue culture that allows in vitro drug testing: It correctly shows a strong drug response upon gefitinib (Gef) treatment in a cell line harboring an EGFR-activating mutation (HCC827), but no clear drug response upon treatment with the HSP90 inhibitor 17AAG in two cell lines with KRAS mutations (H441, A549). In contrast, 2D testing implies wrongly KRAS as a biomarker for HSP90 inhibitor treatment, although this fails in clinical studies. Signaling analysis by phospho-arrays showed similar effects of EGFR inhibition by Gef in HCC827 cells, under both 2D and 3D conditions. Western blot analysis confirmed that for 3D conditions, HSP90 inhibitor treatment implies different p53 regulation and decreased MET inhibition in HCC827 and H441 cells. Using in vitro data (western, phospho-kinase array, proliferation, and apoptosis), we generated cell line-specific in silico topologies and condition-specific (2D, 3D) simulations of signaling correctly mirroring in vitro treatment responses. Networks predict drug targets considering key interactions and individual cell line mutations using the Human Protein Reference Database and the COSMIC database. A signature of potential biomarkers and matching drugs improve stratification and treatment in KRAS-mutated tumors. In silico screening and dynamic simulation of drug actions resulted in individual therapeutic suggestions, that is, targeting HIF1A in H441 and LKB1 in A549 cells. In conclusion, our in vitro tumor tissue model combined with an in silico tool improves drug effect prediction and patient stratification. Our tool is used in our comprehensive cancer center and is made now publicly available for targeted therapy decisions. KW - 3D lung tumor model KW - Boolean signaling network KW - chemoresistance KW - HSP90 inhibitor KW - insilico drug screening too KW - KRAS mutation signature Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233137 VL - 12 ER - TY - JOUR A1 - Stromecki, Margaret A1 - Tatari, Nazanin A1 - Coudière Morrison, Ludivine A1 - Kaur, Ravinder A1 - Zagozewski, Jamie A1 - Palidwor, Gareth A1 - Ramaswamy, Vijay A1 - Skowron, Patryk A1 - Wölfl, Matthias A1 - Milde, Till A1 - Del Bigio, Marc R. A1 - Taylor, Michael D. A1 - Werbowetski-Ogilvie, Tamra E. T1 - Characterization of a novel OTX2-driven stem cell program in Group 3 and Group 4 medulloblastoma JF - Molecular Oncology N2 - Medulloblastoma (MB) is the most common malignant primary pediatric brain cancer. Among the most aggressive subtypes, Group 3 and Group 4 originate from stem/progenitor cells, frequently metastasize, and often display the worst prognosis, yet we know the least about the molecular mechanisms driving their progression. Here, we show that the transcription factor orthodenticle homeobox 2 (OTX2) promotes self-renewal while inhibiting differentiation in vitro and increases tumor initiation from MB stem/progenitor cells in vivo. To determine how OTX2 contributes to these processes, we employed complementary bioinformatic approaches to characterize the OTX2 regulatory network and identified novel relationships between OTX2 and genes associated with neuronal differentiation and axon guidance signaling in Group 3 and Group 4 MB stem/progenitor cells. In particular, OTX2 levels were negatively correlated with semaphorin (SEMA) signaling, as expression of 9 SEMA pathway genes is upregulated following OTX2 knockdown with some being potential direct OTX2 targets. Importantly, this negative correlation was also observed in patient samples, with lower expression of SEMA4D associated with poor outcome specifically in Group 4 tumors. Functional proof-of-principle studies demonstrated that increased levels of select SEMA pathway genes are associated with decreased self-renewal and growth in vitro and in vivo and that RHO signaling, known to mediate the effects of SEMA genes, is contributing to the OTX2 KD phenotype. Our study provides mechanistic insight into the networks controlled by OTX2 in MB stem/progenitor cells and reveals novel roles for axon guidance genes and their downstream effectors as putative tumor suppressors in MB. KW - axon guidance genes KW - medulloblastoma KW - orthodenticle homeobox 2 KW - RHO KW - semaphorin KW - stem cells Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-240089 VL - 12 ER - TY - JOUR A1 - Storey, Benjamin C. A1 - Staplin, Natalie A1 - Haynes, Richard A1 - Reith, Christina A1 - Emberson, Jonathan A1 - Herrington, William G. A1 - Wheeler, David C. A1 - Walker, Robert A1 - Fellström, Bengt A1 - Wanner, Christoph A1 - Landray, Martin J. A1 - Baigent, Colin T1 - Lowering LDL cholesterol reduces cardiovascular risk independently of presence of inflammation JF - Kidney International N2 - Markers of inflammation, including plasma C-reactive protein (CRP), are associated with an increased risk of cardiovascular disease, and it has been suggested that this association is causal. However, the relationship between inflammation and cardiovascular disease has not been extensively studied in patients with chronic kidney disease. To evaluate this, we used data from the Study of Heart and Renal Protection (SHARP) to assess associations between circulating CRP and LDL cholesterol levels and the risk of vascular and non-vascular outcomes. Major vascular events were defined as nonfatal myocardial infarction, cardiac death, stroke or arterial revascularization, with an expanded outcome of vascular events of any type. Higher baseline CRP was associated with an increased risk of major vascular events (hazard ratio per 3x increase 1.28; 95% confidence interval 1.19-1.38). Higher baseline LDL cholesterol was also associated with an increased risk of major vascular events (hazard ratio per 0.6 mmol/L higher LDL cholesterol; 1.14, 1.06-1.22). Higher baseline CRP was associated with an increased risk of a range of non-vascular events (1.16, 1.12-1.21), but there was a weak inverse association between baseline LDL cholesterol and non-vascular events (0.96, 0.92-0.99). The efficacy of lowering LDL cholesterol with simvastatin/ezetimibe on major vascular events, in the randomized comparison, was similar irrespective of CRP concentration at baseline. Thus, decisions to offer statin-based therapy to patients with chronic kidney disease should continue to be guided by their absolute risk of atherosclerotic events. Estimation of such risk may include plasma biomarkers of inflammation, but there is no evidence that the relative beneficial effects of reducing LDL cholesterol depends on plasma CRP concentration. KW - C-reactive protein KW - inflammation KW - LDL cholesterol KW - randomized trials KW - vascular disease Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-240067 VL - 93 ER - TY - JOUR A1 - Hoenigl, Martin A1 - Orasch, Thomas A1 - Faserl, Klaus A1 - Prattes, Juergen A1 - Loeffler, Juergen A1 - Springer, Jan A1 - Gsaller, Fabio A1 - Reischies, Frederike A1 - Duettmann, Wiebke A1 - Raggam, Reinhard B. A1 - Lindner, Herbert A1 - Haas, Hubertus T1 - Triacetylfusarinine C: A urine biomarker for diagnosis of invasive aspergillosis JF - Journal of Infection N2 - Objectives Early diagnosis of invasive aspergillosis (IA) remains challenging, with available diagnostics being limited by inadequate sensitivities and specificities. Triacetylfusarinine C, a fungal siderophore that has been shown to accumulate in urine in animal models, is a potential new biomarker for diagnosis of IA. Methods We developed a method allowing absolute and matrix-independent mass spectrometric quantification of TAFC. Urine TAFC, normalized to creatinine, was determined in 44 samples from 24 patients with underlying hematologic malignancies and probable, possible or no IA according to current EORTC/MSG criteria and compared to other established biomarkers measured in urine and same-day blood samples. Results TAFC/creatinine sensitivity, specificity, positive and negative likelihood ratio for probable versus no IA (cut-off ≥ 3) were 0.86, 0.88, 6.86, 0.16 per patient. Conclusion For the first time, we provide proof for the occurrence of TAFC in human urine. TAFC/creatinine index determination in urine showed promising results for diagnosis of IA offering the advantages of non-invasive sampling. Sensitivity and specificity were similar as reported for GM determination in serum and bronchoalveolar lavage, the gold standard mycological criterion for IA diagnosis. KW - aspergillosis KW - biomarker KW - diagnosis KW - siderophore KW - urine Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-320939 VL - 78 ER - TY - JOUR A1 - Estes, Chris A1 - Anstee, Quentin M. A1 - Arias-Loste, Maria Teresa A1 - Bantel, Heike A1 - Bellentani, Stefano A1 - Caballeria, Joan A1 - Colombo, Massimo A1 - Craxi, Antonio A1 - Crespo, Javier A1 - Day, Christopher P. A1 - Eguchi, Yuichiro A1 - Geier, Andreas A1 - Kondili, Loreta A. A1 - Kroy, Daniela C. A1 - Lazarus, Jeffrey V. A1 - Loomba, Rohit A1 - Manns, Michael P. A1 - Marchesini, Giulio A1 - Nakajima, Atsushi A1 - Negro, Francesco A1 - Petta, Salvatore A1 - Ratziu, Vlad A1 - Romero-Gomez, Manuel A1 - Sanyal, Arun A1 - Schattenberg, Jörn M. A1 - Tacke, Frank A1 - Tanaka, Junko A1 - Trautwein, Christian A1 - Wei, Lai A1 - Zeuzem, Stefan A1 - Ravazi, Homie T1 - Modeling NAFLD disease burden in China, France, Germany, Italy, Japan, Spain, United Kingdom, and United States for the period 2016–2030 JF - Journal of Hepatology N2 - Background & Aims Non-alcoholic fatty liver disease (NAFLD) and non-alcoholic steatohepatitis (NASH) are increasingly a cause of cirrhosis and hepatocellular carcinoma globally. This burden is expected to increase as epidemics of obesity, diabetes and metabolic syndrome continue to grow. The goal of this analysis was to use a Markov model to forecast NAFLD disease burden using currently available data. Methods A model was used to estimate NAFLD and NASH disease progression in eight countries based on data for adult prevalence of obesity and type 2 diabetes mellitus (DM). Published estimates and expert consensus were used to build and validate the model projections. Results If obesity and DM level off in the future, we project a modest growth in total NAFLD cases (0–30%), between 2016–2030, with the highest growth in China as a result of urbanization and the lowest growth in Japan as a result of a shrinking population. However, at the same time, NASH prevalence will increase 15–56%, while liver mortality and advanced liver disease will more than double as a result of an aging/increasing population. Conclusions NAFLD and NASH represent a large and growing public health problem and efforts to understand this epidemic and to mitigate the disease burden are needed. If obesity and DM continue to increase at current and historical rates, both NAFLD and NASH prevalence are expected to increase. Since both are reversible, public health campaigns to increase awareness and diagnosis, and to promote diet and exercise can help manage the growth in future disease burden. Lay summary Non-alcoholic fatty liver disease and non-alcoholic steatohepatitis can lead to advanced liver disease. Both conditions are becoming increasingly prevalent as the epidemics of obesity and diabetes continue to increase. A mathematical model was built to understand how the disease burden associated with non-alcoholic fatty liver disease and non-alcoholic steatohepatitis will change over time. Results suggest increasing cases of advanced liver disease and liver-related mortality in the coming years. KW - burden of disease KW - cardiovascular disease KW - health care resource utilization KW - metabolic syndrome KW - NAFLD KW - NASH KW - cirrhosis KW - HCC KW - diabetes mellitus KW - obesity Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-227286 VL - 69 ER - TY - JOUR A1 - Tappenbeck, Nils A1 - Schröder, Hannes M. A1 - Niebergall-Roth, Elke A1 - Hassinger, Fathema A1 - Dehio, Ulf A1 - Dieter, Kathrin A1 - Kraft, Korinna A1 - Kerstan, Andreas A1 - Esterlechner, Jasmina A1 - Frank, Natasha Y. A1 - Scharffetter-Kochanek, Karin A1 - Murphy, George F. A1 - Orgill, Dennis P. A1 - Beck, Joachim A1 - Frank, Markus H. A1 - Ganss, Christoph A1 - Kluth, Mark A. T1 - In vivo safety profile and biodistribution of GMP-manufactured human skin-derived ABCB5-positive mesenchymal stromal cells for use in clinical trials JF - Cytotherapy N2 - Background aims Human dermal ABCB5-expressing mesenchymal stromal cells (ABCB5+ MSCs) represent a promising candidate for stem cell–based therapy of various currently uncurable diseases in several fields of regenerative medicine. We have developed and validated a method to isolate, from human skin samples, and expand ABCB5+ MSCs that meet the guideline criteria of the International Society for Cellular Therapy. We are able to process these cells into a Good Manufacturing Practice–conforming, MSC-based advanced-therapy medicinal product. Methods To support the development of ABCB5+ MSCs for potential therapeutic topical, intramuscular and intravenous administration, we have tested our product in a series of Good Laboratory Practice–compliant nonclinical in-vivo studies addressing all relevant aspects of biosafety, including potential long-term persistence and proliferation, distribution to nontarget tissues, differentiation into undesired cell types, ectopic tissue formation, tumor formation and local tissue reaction. Results (i) Subcutaneous application of 1 × 107 ABCB5+ MSCs/animal and intravenous application of 2 × 106 ABCB5+ MSCs/animal, respectively, to immunocompromised mice did not result in safety-relevant biodistribution, persistence or proliferation of the cells; (ii) three monthly subcutaneous injections of ABCB5+ MSCs at doses ranging from 1 × 105 to 1 × 107 cells/animal and three biweekly intravenous injections of 2 × 106 ABCB5+ MSCs/animal, respectively, to immunocompromised mice were nontoxic and revealed no tumorigenic potential; and (iii) intramuscular injection of 5 × 106 ABCB5+ MSCs/animal to immunocompromised mice was locally well tolerated. Discussion The present preclinical in vivo data demonstrate the local and systemic safety and tolerability of a novel advanced-therapy medicinal product based on human skin-derived ABCB5+ MSCs. KW - stromal cells KW - stem cells KW - MSC KW - biodistribution KW - safety KW - ABCB5 KW - GMP KW - tumorigenicity KW - toxicity KW - persistence Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-240456 VL - 21 ER - TY - JOUR A1 - Wurm, Michael A1 - Stark, Thomas A1 - Zhu, Xiao Xiang A1 - Weigand, Matthias A1 - Taubenböck, Hannes T1 - Semantic segmentation of slums in satellite images using transfer learning on fully convolutional neural networks JF - ISPRS Journal of Photogrammetry and Remote Sensing N2 - Unprecedented urbanization in particular in countries of the global south result in informal urban development processes, especially in mega cities. With an estimated 1 billion slum dwellers globally, the United Nations have made the fight against poverty the number one sustainable development goal. To provide better infrastructure and thus a better life to slum dwellers, detailed information on the spatial location and size of slums is of crucial importance. In the past, remote sensing has proven to be an extremely valuable and effective tool for mapping slums. The nature of used mapping approaches by machine learning, however, made it necessary to invest a lot of effort in training the models. Recent advances in deep learning allow for transferring trained fully convolutional networks (FCN) from one data set to another. Thus, in our study we aim at analyzing transfer learning capabilities of FCNs to slum mapping in various satellite images. A model trained on very high resolution optical satellite imagery from QuickBird is transferred to Sentinel-2 and TerraSAR-X data. While free-of-charge Sentinel-2 data is widely available, its comparably lower resolution makes slum mapping a challenging task. TerraSAR-X data on the other hand, has a higher resolution and is considered a powerful data source for intra-urban structure analysis. Due to the different image characteristics of SAR compared to optical data, however, transferring the model could not improve the performance of semantic segmentation but we observe very high accuracies for mapped slums in the optical data: QuickBird image obtains 86–88% (positive prediction value and sensitivity) and a significant increase for Sentinel-2 applying transfer learning can be observed (from 38 to 55% and from 79 to 85% for PPV and sensitivity, respectively). Using transfer learning proofs extremely valuable in retrieving information on small-scaled urban structures such as slum patches even in satellite images of decametric resolution. KW - slums KW - FCN KW - convolutional neural networks KW - deep learning KW - transfer learning Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233799 VL - 150 ER - TY - JOUR A1 - Czimmerer, Zsolt A1 - Daniel, Bence A1 - Horvath, Attila A1 - Rückerl, Dominik A1 - Nagy, Gergely A1 - Kiss, Mate A1 - Peloquin, Matthew A1 - Budai, Marietta M. A1 - Cuaranta-Monroy, Ixchelt A1 - Simandi, Zoltan A1 - Steiner, Laszlo A1 - Nagy Jr., Bela A1 - Poliska, Szilard A1 - Banko, Csaba A1 - Bacso, Zsolt A1 - Schulman, Ira G. A1 - Sauer, Sascha A1 - Deleuze, Jean-Francois A1 - Allen, Judith E. A1 - Benko, Szilvia A1 - Nagy, Laszlo T1 - The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages JF - Immunity N2 - The molecular basis of signal-dependent transcriptional activation has been extensively studied in macrophage polarization, but our understanding remains limited regarding the molecular determinants of repression. Here we show that IL-4-activated STAT6 transcription factor is required for the direct transcriptional repression of a large number of genes during in vitro and in vivo alternative macrophage polarization. Repression results in decreased lineage-determining transcription factor, p300, and RNA polymerase II binding followed by reduced enhancer RNA expression, H3K27 acetylation, and chromatin accessibility. The repressor function of STAT6 is HDAC3 dependent on a subset of IL-4-repressed genes. In addition, STAT6-repressed enhancers show extensive overlap with the NF-κB p65 cistrome and exhibit decreased responsiveness to lipopolysaccharide after IL-4 stimulus on a subset of genes. As a consequence, macrophages exhibit diminished inflammasome activation, decreased IL-1β production, and pyroptosis. Thus, the IL-4-STAT6 signaling pathway establishes an alternative polarization-specific epigenenomic signature resulting in dampened macrophage responsiveness to inflammatory stimuli. KW - IL-4 KW - STAT6 KW - alternative macrophage polarization KW - transcription KW - repression KW - inflammation KW - inflammasome activation KW - pyroptosis KW - IL-1β KW - macrophage epigenomics Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-223380 VL - 48 ER - TY - JOUR A1 - Trübe, Patricia A1 - Hertlein, Tobias A1 - Mrochen, Daniel M. A1 - Schulz, Daniel A1 - Jorde, Ilka A1 - Krause, Bettina A1 - Zeun, Julia A1 - Fischer, Stefan A1 - Wolf, Silver A. A1 - Walther, Birgit A1 - Semmler, Torsten A1 - Bröker, Barbara M. A1 - Ulrich, Rainer G. A1 - Ohlsen, Knut A1 - Holtfreter, Silva T1 - Bringing together what belongs together: Optimizing murine infection models by using mouse-adapted Staphylococcus aureus strains JF - International Journal of Medical Microbiology N2 - Staphylococcus (S.) aureus is a leading cause of bacterial infection world-wide, and currently no vaccine is available for humans. Vaccine development relies heavily on clinically relevant infection models. However, the suitability of mice for S. aureus infection models has often been questioned, because experimental infection of mice with human-adapted S. aureus requires very high infection doses. Moreover, mice were not considered to be natural hosts of S. aureus. The latter has been disproven by our recent findings, showing that both laboratory mice, as well as wild small mammals including mice, voles, and shrews, are naturally colonized with S. aureus. Here, we investigated whether mouse-and vole-derived S. aureus strains show an enhanced virulence in mice as compared to the human-adapted strain Newman. Using a step-wise approach based on the bacterial genotype and in vitro assays for host adaptation, we selected the most promising candidates for murine infection models out of a total of 254 S. aureus isolates from laboratory mice as well as wild rodents and shrews. Four strains representing the clonal complexes (CC) 8, 49, and 88 (n = 2) were selected and compared to the human-adapted S. aureus strain Newman (CC8) in murine pneumonia and bacteremia models. Notably, a bank vole-derived CC49 strain, named DIP, was highly virulent in BALB/c mice in pneumonia and bacteremia models, whereas the other murine and vole strains showed virulence similar to or lower than that of Newman. At one tenth of the standard infection dose DIP induced disease severity, bacterial load and host cytokine and chemokine responses in the murine bacteremia model similar to that of Newman. In the pneumonia model, DIP was also more virulent than Newman but the effect was less pronounced. Whole genome sequencing data analysis identified a pore-forming toxin gene, lukF-PV(P83)/lukM, in DIP but not in the other tested S. aureus isolates. To conclude, the mouse-adapted S. aureus strain DIP allows a significant reduction of the inoculation dose in mice and is hence a promising tool to develop clinically more relevant infection models. KW - Staphylococcus aureus KW - host-adapted KW - infection model KW - mouse KW - vole KW - CC49 Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-229081 VL - 309 ER - TY - JOUR A1 - Heimann, Sebastian M. A1 - Penack, Olaf A1 - Heinz, Werner J. A1 - Rachow, Tobias A1 - Egerer, Gerlinde A1 - Kessel, Johanna A1 - Claßen, Annika Y. A1 - Vehreschild, Jörg Janne T1 - Intravenous and tablet formulation of posaconazole in antifungal therapy and prophylaxis: A retrospective, non-interventional, multicenter analysis of hematological patients treated in tertiary-care hospitals JF - International Journal of Infectious Diseases N2 - Objectives Novel formulations (gastro-resistant tablet and intravenous solution) of posaconazole (POS) have been approved in prophylaxis and therapy of invasive fungal diseases (IFDs). Study aim was to analyze treatment strategies and clinical effectiveness. Methods We set up a web-based registry on www.ClinicalSurveys.net for documentation of comprehensive data of patients who received novel POS formulations. Data analysis was split into two groups of patients who received novel POS formulations for antifungal prophylaxis (posaconazole prophylaxis group) and antifungal therapy (posaconazole therapy group), respectively. Results Overall, 180 patients (151 in the posaconazole prophylaxis group and 29 in the posaconazole therapy group) from six German tertiary care centers and hospitalized between 05/2014 – 03/2016 were observed. Median age was 58 years (range: 19 – 77 years) and the most common risk factor for IFD was chemotherapy (n = 136; 76%). In the posaconazole prophylaxis group and posaconazole therapy group, median POS serum levels at steady-state were 1,068 μg/L (IQR 573–1,498 μg/L) and 904 μg/L (IQR 728–1,550 μg/L), respectively (P = 0.776). During antifungal prophylaxis with POS, nine (6%) probable/proven fungal breakthroughs were reported and overall survival rate of hospitalization was 86%. The median overall duration of POS therapy was 18 days (IQR: 7 – 23 days). Fourteen patients (48%) had progressive IFD under POS therapy, of these five patients (36%) died related to or likely related to IFD. Conclusions Our study demonstrates clinical effectiveness of antifungal prophylaxis with novel POS formulations. In patients treated for possible/probable/proven IFD, we observed considerable mortality in patients receiving salvage treatment and with infections due to rare fungal species. KW - invasive fungal infection KW - neutropenia KW - posaconazole serum level KW - clinical effectiveness KW - high-risk patient Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-319567 VL - 83 ER - TY - JOUR A1 - Dietz, Maximilian A1 - Johnson, Alice A1 - Martínez-Martínez, Antonio A1 - Weller, Andrew S. T1 - The [Rh(Xantphos)]+ catalyzed hydroboration of diphenylacetylene using trimethylamine-borane JF - Inorganica Chimica Acta N2 - The rhodium(I) complex [Rh(κ3-P,O,P-Xantphos)(η2-PhC≡CPh)][BArF4] (ArF = 3,5-(CF3)2C6H4) is an effective catalyst for the cis-selective hydroboration of the alkyne diphenylacetylene using the amine-borane H3B·NMe3. Detailed mechanistic studies, that include initial rate measurements, full simulation of temporal profiles for a variety of catalyst and substrate concentrations, and speciation experiments, suggest a mechanism that involves initial coordination of alkyne and a saturation kinetics regime for amine-borane binding. The solid-state molecular structure of a model complex that probes the proposed resting state is also reported, [Rh(κ3-P,O,P-Xantphos)(NCMe)(η2-PhC≡CPh)][BArF4]. KW - rhodium KW - hydroboration KW - amine borane KW - mechanism Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-225352 VL - 491 ER - TY - JOUR A1 - Seitz, Nicola A1 - vanEngelsdorp, Dennis A1 - Leonhardt, Sara D. T1 - Conserving bees in destroyed landscapes: The potentials of reclaimed sand mines JF - Global Ecology and Conservation N2 - Sand mines represent anthropogenically impacted habitats found worldwide, which bear potential for bee conservation. Although floral resources can be limited at these habitats, vegetation free patches of open sandy soils and embankments may offer good nesting possibilities for sand restricted and other bees. We compared bee communities as found in three reclaimed sand mines and at adjacent roadside meadows in Maryland, USA, over two years. Both sand mines and roadsides hosted diverse bee communities with 111 and 88 bee species, respectively. Bee abundances as well as richness and Shannon diversity of bee species were higher in sand mines than at roadsides and negatively correlated with the percentage of vegetational ground cover. Species composition also differed significantly between habitats. Sand mines hosted a higher proportion of ground nesters, more uncommon and more ‘sand loving’ bees similar to natural sandy areas of Maryland. Despite the destruction of the original pre-mining habitat, sand mines thus appear to represent a unique habitat for wild bees, particularly when natural vegetation and open sand spots are encouraged. Considering habitat loss, the lack of natural disturbance regimes, and ongoing declines of wild bees, sand mines could add promising opportunities for bee conservation which has hitherto mainly focused on agricultural and urban habitats. KW - bee conservation KW - bee decline KW - habitat restoration KW - land use KW - wild bees KW - ground nesters Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-235877 VL - 19 ER - TY - JOUR A1 - van de Peppel, L. J. J. A1 - Aanen, D. K. A1 - Biedermann, P. H. W. T1 - Low intraspecific genetic diversity indicates asexuality and vertical transmission in the fungal cultivars of ambrosia beetles JF - Fungal Ecology N2 - Ambrosia beetles farm ascomycetous fungi in tunnels within wood. These ambrosia fungi are regarded asexual, although population genetic proof is missing. Here we explored the intraspecific genetic diversity of Ambrosiella grosmanniae and Ambrosiella hartigii (Ascomycota: Microascales), the mutualists of the beetles Xylosandrus germanus and Anisandrus dispar. By sequencing five markers (ITS, LSU, TEF1α, RPB2, β-tubulin) from several fungal strains, we show that X. germanus cultivates the same two clones of A. grosmanniae in the USA and in Europe, whereas A. dispar is associated with a single A. hartigii clone across Europe. This low genetic diversity is consistent with predominantly asexual vertical transmission of Ambrosiella cultivars between beetle generations. This clonal agriculture is a remarkable case of convergence with fungus-farming ants, given that both groups have a completely different ecology and evolutionary history. KW - clonal fungiculture KW - ambrosia fungus KW - Ambrosiella KW - vertical transmission KW - symbiosis KW - Xylosandrus KW - Anisandrus KW - asexuality KW - genetic diversity Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-232161 VL - 32 ER - TY - JOUR A1 - Grebinyk, Anna A1 - Grebinyk, Sergii A1 - Prylutska, Svitlana A1 - Ritter, Uwe A1 - Matyshevska, Olga A1 - Dandekar, Thomas A1 - Frohme, Marcus T1 - C60 fullerene accumulation in human leukemic cells and perspectives of LED-mediated photodynamic therapy JF - Free Radical Biology and Medicine N2 - Recent progress in nanobiotechnology has attracted interest to a biomedical application of the carbon nanostructure C60 fullerene since it possesses a unique structure and versatile biological activity. C60 fullerene potential application in the frame of cancer photodynamic therapy (PDT) relies on rapid development of new light sources as well as on better understanding of the fullerene interaction with cells. The aim of this study was to analyze C60 fullerene effects on human leukemic cells (CCRF-CEM) in combination with high power single chip light-emitting diodes (LEDs) light irradiation of different wavelengths: ultraviolet (UV, 365 nm), violet (405 nm), green (515 nm) and red (632 nm). The time-dependent accumulation of fullerene C60 in CCRF-CEM cells up to 250 ng/106 cells at 24 h with predominant localization within mitochondria was demonstrated with immunocytochemical staining and liquid chromatography mass spectrometry. In a cell viability assay we studied photoexcitation of the accumulated C60 nanostructures with ultraviolet or violet LEDs and could prove that significant phototoxic effects did arise. A less pronounced C60 fullerene phototoxic effect was observed after irradiation with green, and no effect was detected with red light. A C60 fullerene photoactivation with violet light induced substantial ROS generation and apoptotic cell death, confirmed by caspase3/7 activation and plasma membrane phosphatidylserine externalization. Our work proved C60 fullerene ability to induce apoptosis of leukemic cells after photoexcitation with high power single chip 405 nm LED as a light source. This underlined the potential for application of C60 nanostructure as a photosensitizer for anticancer therapy. KW - C-60 fullerene KW - photodanamic therapy KW - LEDs KW - leukemic cells KW - immunocytochemistry KW - HPLC-ESI-MS KW - apoptosis Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-228245 VL - 124 ER - TY - JOUR A1 - Mueller, Dolores A1 - Jung, Kathrin A1 - Winter, Manuel A1 - Rogoll, Dorothee A1 - Melcher, Ralph A1 - Kulozik, Ulrich A1 - Schwarz, Karin A1 - Richling, Elke T1 - Encapsulation of anthocyanins from bilberries – Effects on bioavailability and intestinal accessibility in humans JF - Food Chemistry N2 - Anthocyanins are flavonoids that have been suggested to provide beneficial health effects. The biological activity of anthocyanins is influenced by their pharmacokinetic properties, but anthocyanins are associated with limited bioavailability in humans. In the presented study, we investigated how the encapsulation of bilberry extract (BE), a source of anthocyanins, with either whey protein or citrus pectin influences the bioavailability and intestinal accessibility of anthocyanins in humans. We performed an intervention study that analyzed anthocyanins and their degradation products in the urine, plasma, and ileal effluent of healthy volunteers and ileostomists (subjects without an intact colon). We were able to show, that whey protein encapsulation modulated short-term bioavailability and that citrus pectin encapsulation increased intestinal accessibility during passage through the small intestine and modulated the formation of the degradation product phloroglucinol aldehyde (PGAL) in human plasma. KW - anthocyanins KW - encapsulation KW - human intervention KW - bioavailability KW - phloroglucinol aldehyde Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-224247 VL - 248 ER - TY - JOUR A1 - Franke, Barbara A1 - Michelini, Giorgia A1 - Asherson, Philip A1 - Banaschewski, Tobias A1 - Bilbow, Andrea A1 - Buitelaar, Jan K. A1 - Cormand, Bru A1 - Faraone, Stephen V. A1 - Ginsberg, Ylva A1 - Haavik, Jan A1 - Kuntsi, Jonna A1 - Larsson, Henrik A1 - Lesch, Klaus-Peter A1 - Ramos-Quiroga, J. Antoni A1 - Réthelyi, János M. A1 - Ribases, Marta A1 - Reif, Andreas T1 - Live fast, die young? A review on the developmental trajectories of ADHD across the lifespan JF - European Neuropsychopharmacology N2 - Attention-deficit/hyperactivity disorder (ADHD) is highly heritable and the most common neurodevelopmental disorder in childhood. In recent decades, it has been appreciated that in a substantial number of cases the disorder does not remit in puberty, but persists into adulthood. Both in childhood and adulthood, ADHD is characterised by substantial comorbidity including substance use, depression, anxiety, and accidents. However, course and symptoms of the disorder and the comorbidities may fluctuate and change over time, and even age of onset in childhood has recently been questioned. Available evidence to date is poor and largely inconsistent with regard to the predictors of persistence versus remittance. Likewise, the development of comorbid disorders cannot be foreseen early on, hampering preventive measures. These facts call for a lifespan perspective on ADHD from childhood to old age. In this selective review, we summarise current knowledge of the long-term course of ADHD, with an emphasis on clinical symptom and cognitive trajectories, treatment effects over the lifespan, and the development of comorbidities. Also, we summarise current knowledge and important unresolved issues on biological factors underlying different ADHD trajectories. We conclude that a severe lack of knowledge on lifespan aspects in ADHD still exists for nearly every aspect reviewed. We encourage large-scale research efforts to overcome those knowledge gaps through appropriately granular longitudinal studies. KW - developmental trajectory KW - treatment KW - comorbidity KW - cognitive impairment KW - genetics KW - adult-onset ADHD Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-228407 VL - 28 ER - TY - JOUR A1 - Hofrichter, Michaela A. H. A1 - Doll, Julia A1 - Habibi, Haleh A1 - Enayati, Samaneh A1 - Mehrjardi, Mohammad Yahya Vahidi A1 - Müller, Tobias A1 - Dittrich, Marcus A1 - Haaf, Thomas A1 - Vona, Barbara T1 - Exome-wide copy number variation analysis identifies a COL9A1 in frame deletion that is associated with hearing loss JF - European Journal of Medical Genetics N2 - Pathogenic variants in COL9A1 are primarily associated with autosomal recessive Stickler syndrome. Patients with COL9A1-associated Stickler syndrome (STL) present hearing loss (HL), ophthalmic manifestations and skeletal abnormalities. However, the clinical spectrum of patients with COL9A1 variants can also include multiple epiphyseal dysplasia, as well as non-syndromic HL that was observed in one previously reported proband. Exome sequencing was performed on the genomic DNA of an Iranian patient and his affected brother who both report non-syndromic HL. A 44.6 kb homozygous in-frame deletion spanning exons 6 to 33 of COL9A1 was detected via exome-based copy number variation analysis. The deleted exons were confirmed by PCR in the patient and his affected brother, who both have non-syndromic HL. Segregation analysis via qPCR confirmed the parents as heterozygous deletion carriers. Breakpoint analysis mapped the homozygous deletion spanning introns 5 to 33 (g.70,948,188_70,997,277del, NM_001851.4(COL9A1):c.697–3754_2112+769del, p.(Phe233_Ser704del), with an additional 67 bp of inserted intronic sequence that may have originated due to a fork stalling and template switching/microhomology-mediated break-induced replication (FoSTeS/MMBIR) mechanism. This mechanism has not been previously implicated in HL or STL. This is also the first reported copy number variation in COL9A1 that was identified through an exome data set in an Iranian family with apparent non-syndromic HL. The present study emphasizes the importance of exome-wide copy number variation analysis in molecular diagnosis and provides supporting evidence to associate COL9A1 with autosomal recessive non-syndromic HL. KW - COL9A1 KW - copy number variation KW - FoSTeS/MMBIR mechanism KW - non-syndromic hearing loss KW - Stickler syndrome Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-322008 VL - 62 ER - TY - JOUR A1 - Elliot, Perry M. A1 - Germain, Dominique P. A1 - Hilz, Max J. A1 - Spada, Marco A1 - Wanner, Christoph A1 - Falissard, Bruno T1 - Why systematic literature reviews in Fabry disease should include all published evidence JF - European Journal of Medical Genetics N2 - Fabry disease is an X-linked inherited, progressive disorder of lipid metabolism resulting from the deficient activity of the enzyme α-galactosidase. Enzyme replacement therapy (ERT) with recombinant agalsidase, with intravenous infusions of either agalsidase beta or agalsidase alfa, is available and clinical experience now exceeds 15 years. There are very few randomised, placebo-controlled clinical trials evaluating the outcomes of ERT. Data are often derived from observational, registry-based studies and case reports. Pooled analysis of data from different sources may be limited by the heterogeneity of the patient populations, outcomes and treatment. Therefore, comprehensive systematic literature reviews of unpooled data are needed to determine the effects of ERT on disease outcomes. A systematic literature search was conducted in the Embase and PubMed (MEDLINE) databases to retrieve original articles that evaluated outcomes of ERT in patients with Fabry disease; the outcome data were analysed unpooled. The literature analysis included the full range of published literature including observational studies and case series/case reports. Considerable heterogeneity was found among the studies, with differences in sample size, statistical methods, ERT regimens and patient demographic and clinical characteristics. We have demonstrated the value of performing an unpooled systematic literature review of all published evidence of ERT outcomes in Fabry disease, highlighting that in a rare genetic disorder like Fabry disease, which is phenotypically diverse, different patient populations can require different disease management and therapeutic goals depending on age, genotype, and disease severity/level of organ involvement. In addition, these findings are valuable to guide the design and reporting of new clinical studies. KW - Fabry disease KW - enzyme replacement therapy KW - systematic literature review Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-226654 VL - 62 ER - TY - JOUR A1 - Sondermann, Wiebke A1 - Utikal, Jochen Sven A1 - Enk, Alexander H. A1 - Schadendorf, Dirk A1 - Klode, Joachim A1 - Hauschild, Axel A1 - Weichenthal, Michael A1 - French, Lars E. A1 - Berking, Carola A1 - Schilling, Bastian A1 - Haferkamp, Sebastian A1 - Fröhling, Stefan A1 - von Kalle, Christof A1 - Brinker, Titus J. T1 - Prediction of melanoma evolution in melanocytic nevi via artificial intelligence: A call for prospective data JF - European Journal of Cancer N2 - Recent research revealed the superiority of artificial intelligence over dermatologists to diagnose melanoma from images. However, 30–50% of all melanomas and more than half of those in young patients evolve from initially benign lesions. Despite its high relevance for melanoma screening, neither clinicians nor computers are yet able to reliably predict a nevus’ oncologic transformation. The cause of this lies in the static nature of lesion presentation in the current standard of care, both for clinicians and algorithms. The status quo makes it difficult to train algorithms (and clinicians) to precisely assess the likelihood of a benign skin lesion to transform into melanoma. In addition, it inhibits the precision of current algorithms since ‘evolution’ image features may not be part of their decision. The current literature reveals certain types of melanocytic nevi (i.e. ‘spitzoid’ or ‘dysplastic’ nevi) and criteria (i.e. visible vasculature) that, in general, appear to have a higher chance to transform into melanoma. However, owing to the cumulative nature of oncogenic mutations in melanoma, a more fine-grained early morphologic footprint is likely to be detectable by an algorithm. In this perspective article, the concept of melanoma prediction is further explored by the discussion of the evolution of melanoma, the concept for training of such a nevi classifier and the implications of early melanoma prediction for clinical practice. In conclusion, the authors believe that artificial intelligence trained on prospective image data could be transformative for skin cancer diagnostics by (a) predicting melanoma before it occurs (i.e. pre-in situ) and (b) further enhancing the accuracy of current melanoma classifiers. Necessary prospective images for this research are obtained via free mole-monitoring mobile apps. KW - melanoma KW - skin cancer KW - artificial Intelligence KW - deep learning KW - prediction Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-239263 VL - 119 ER - TY - JOUR A1 - Chen, Wei-Hua A1 - Lu, Guanting A1 - Chen, Xiao A1 - Zhao, Xing-Ming A1 - Bork, Peer T1 - OGEE v2: an update of the online gene essentiality database with special focus on differentially essential genes in human cancer cell lines JF - Nucleic Acids Research N2 - OGEE is an Online GEne Essentiality database. To enhance our understanding of the essentiality of genes, in OGEE we collected experimentally tested essential and non-essential genes, as well as associated gene properties known to contribute to gene essentiality. We focus on large-scale experiments, and complement our data with text-mining results. We organized tested genes into data sets according to their sources, and tagged those with variable essentiality statuses across data sets as conditionally essential genes, intending to highlight the complex interplay between gene functions and environments/experimental perturbations. Developments since the last public release include increased number of species and gene essentiality data sets, inclusion of non-coding essential sequences and genes with intermediate essentiality statuses. In addition, we included 16 essentiality data sets from cancer cell lines, corresponding to 9 human cancers; with OGEE, users can easily explore the shared and differentially essential genes within and between cancer types. These genes, especially those derived from cell lines that are similar to tumor samples, could reveal the oncogenic drivers, paralogous gene expression pattern and chromosomal structure of the corresponding cancer types, and can be further screened to identify targets for cancer therapy and/or new drug development. OGEE is freely available at http://ogee.medgenius.info. KW - human cancer cell lines KW - gene essentiality database KW - OGEE v2 Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-181334 VL - 45 IS - D1 ER - TY - JOUR A1 - Garain, Swadhin A1 - Shoyama, Kazutaka A1 - Ginder, Lea-Marleen A1 - Sárosi, Menyhárt A1 - Würthner, Frank T1 - The delayed box: biphenyl bisimide cyclophane, a supramolecular nano-environment for the efficient generation of delayed fluorescence JF - Journal of the American Chemical Society N2 - Activating delayed fluorescence emission in a dilute solution via a non-covalent approach is a formidable challenge. In this report, we propose a strategy for efficient delayed fluorescence generation in dilute solution using a non-covalent approach via supramolecularly engineered cyclophane-based nanoenvironments that provide sufficient binding strength to π-conjugated guests and that can stabilize triplet excitons by reducing vibrational dissipation and lowering the singlet–triplet energy gap for efficient delayed fluorescence emission. Toward this goal, a novel biphenyl bisimide-derived cyclophane is introduced as an electron-deficient and efficient triplet-generating host. Upon encapsulation of various carbazole-derived guests inside the nanocavity of this cyclophane, emissive charge transfer (CT) states close to the triplet energy level of the biphenyl bisimide are generated. The experimental results of host–guest studies manifest high association constants up to 10\(^4\) M\(^{–1}\) as the prerequisite for inclusion complex formation, the generation of emissive CT states, and triplet-state stabilization in a diluted solution state. By means of different carbazole guest molecules, we could realize tunable delayed fluorescence emission in this carbazole-encapsulated biphenyl bisimide cyclophane in methylcyclohexane/carbon tetrachloride solutions with a quantum yield (QY) of up to 15.6%. Crystal structure analyses and solid-state photophysical studies validate the conclusions from our solution studies and provide insights into the delayed fluorescence emission mechanism. KW - aromatic compounds KW - complexation KW - encapsulation KW - fluorescence KW - hydrocarbons Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370385 SN - 0002-7863 VL - 146 IS - 31 ER - TY - JOUR A1 - Brinker, Titus J. A1 - Hekler, Achim A1 - Enk, Alexander H. A1 - Berking, Carola A1 - Haferkamp, Sebastian A1 - Hauschild, Axel A1 - Weichenthal, Michael A1 - Klode, Joachim A1 - Schadendorf, Dirk A1 - Holland-Letz, Tim A1 - von Kalle, Christof A1 - Fröhling, Stefan A1 - Schilling, Bastian A1 - Utikal, Jochen S. T1 - Deep neural networks are superior to dermatologists in melanoma image classification JF - European Journal of Cancer N2 - Background Melanoma is the most dangerous type of skin cancer but is curable if detected early. Recent publications demonstrated that artificial intelligence is capable in classifying images of benign nevi and melanoma with dermatologist-level precision. However, a statistically significant improvement compared with dermatologist classification has not been reported to date. Methods For this comparative study, 4204 biopsy-proven images of melanoma and nevi (1:1) were used for the training of a convolutional neural network (CNN). New techniques of deep learning were integrated. For the experiment, an additional 804 biopsy-proven dermoscopic images of melanoma and nevi (1:1) were randomly presented to dermatologists of nine German university hospitals, who evaluated the quality of each image and stated their recommended treatment (19,296 recommendations in total). Three McNemar's tests comparing the results of the CNN's test runs in terms of sensitivity, specificity and overall correctness were predefined as the main outcomes. Findings The respective sensitivity and specificity of lesion classification by the dermatologists were 67.2% (95% confidence interval [CI]: 62.6%–71.7%) and 62.2% (95% CI: 57.6%–66.9%). In comparison, the trained CNN achieved a higher sensitivity of 82.3% (95% CI: 78.3%–85.7%) and a higher specificity of 77.9% (95% CI: 73.8%–81.8%). The three McNemar's tests in 2 × 2 tables all reached a significance level of p < 0.001. This significance level was sustained for both subgroups. Interpretation For the first time, automated dermoscopic melanoma image classification was shown to be significantly superior to both junior and board-certified dermatologists (p < 0.001). KW - deep learning KW - melanoma KW - skin cancer KW - artificial intelligence Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-220539 VL - 119 ER - TY - JOUR A1 - Brinker, Titus J. A1 - Hekler, Achim A1 - Hauschild, Axel A1 - Berking, Carola A1 - Schilling, Bastian A1 - Enk, Alexander H. A1 - Haferkamp, Sebastian A1 - Karoglan, Ante A1 - von Kalle, Christof A1 - Weichenthal, Michael A1 - Sattler, Elke A1 - Schadendorf, Dirk A1 - Gaiser, Maria R. A1 - Klode, Joachim A1 - Utikal, Jochen S. T1 - Comparing artificial intelligence algorithms to 157 German dermatologists: the melanoma classification benchmark JF - European Journal of Cancer N2 - Background Several recent publications have demonstrated the use of convolutional neural networks to classify images of melanoma at par with board-certified dermatologists. However, the non-availability of a public human benchmark restricts the comparability of the performance of these algorithms and thereby the technical progress in this field. Methods An electronic questionnaire was sent to dermatologists at 12 German university hospitals. Each questionnaire comprised 100 dermoscopic and 100 clinical images (80 nevi images and 20 biopsy-verified melanoma images, each), all open-source. The questionnaire recorded factors such as the years of experience in dermatology, performed skin checks, age, sex and the rank within the university hospital or the status as resident physician. For each image, the dermatologists were asked to provide a management decision (treat/biopsy lesion or reassure the patient). Main outcome measures were sensitivity, specificity and the receiver operating characteristics (ROC). Results Total 157 dermatologists assessed all 100 dermoscopic images with an overall sensitivity of 74.1%, specificity of 60.0% and an ROC of 0.67 (range = 0.538–0.769); 145 dermatologists assessed all 100 clinical images with an overall sensitivity of 89.4%, specificity of 64.4% and an ROC of 0.769 (range = 0.613–0.9). Results between test-sets were significantly different (P < 0.05) confirming the need for a standardised benchmark. Conclusions We present the first public melanoma classification benchmark for both non-dermoscopic and dermoscopic images for comparing artificial intelligence algorithms with diagnostic performance of 145 or 157 dermatologists. Melanoma Classification Benchmark should be considered as a reference standard for white-skinned Western populations in the field of binary algorithmic melanoma classification. KW - benchmark KW - artificial intelligence KW - deep learning KW - melanoma Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-220569 VL - 111 ER - TY - JOUR A1 - Link, Jana A1 - Paouneskou, Dimitra A1 - Velkova, Maria A1 - Daryabeigi, Anahita A1 - Laos, Triin A1 - Labella, Sara A1 - Barroso, Consuelo A1 - Pacheco Piñol, Sarai A1 - Montoya, Alex A1 - Kramer, Holger A1 - Woglar, Alexander A1 - Baudrimont, Antoine A1 - Markert, Sebastian Mathias A1 - Stigloher, Christian A1 - Martinez-Perez, Enrique A1 - Dammermann, Alexander A1 - Alsheimer, Manfred A1 - Zetka, Monique A1 - Jantsch, Verena T1 - Transient and Partial Nuclear Lamina Disruption Promotes Chromosome Movement in Early Meiotic Prophase JF - Developmental Cell N2 - Meiotic chromosome movement is important for the pairwise alignment of homologous chromosomes, which is required for correct chromosome segregation. Movement is driven by cytoplasmic forces, transmitted to chromosome ends by nuclear membrane-spanning proteins. In animal cells, lamins form a prominent scaffold at the nuclear periphery, yet the role lamins play in meiotic chromosome movement is unclear. We show that chromosome movement correlates with reduced lamin association with the nuclear rim, which requires lamin phosphorylation at sites analogous to those that open lamina network crosslinks in mitosis. Failure to remodel the lamina results in delayed meiotic entry, altered chromatin organization, unpaired or interlocked chromosomes, and slowed chromosome movement. The remodeling kinases are delivered to lamins via chromosome ends coupled to the nuclear envelope, potentially enabling crosstalk between the lamina and chromosomal events. Thus, opening the lamina network plays a role in modulating contacts between chromosomes and the nuclear periphery during meiosis. KW - meiosis KW - C. elegans KW - chromosome movement KW - chromosome pairing KW - nuclear envelope KW - lamin Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-236901 VL - 45 ER - TY - JOUR A1 - Tesfamariam, Y. A1 - Jakob, T. A1 - Wöckel, A. A1 - Adams, A. A1 - Weigl, A. A1 - Monsef, I. A1 - Kuhr, K. A1 - Skoetz, N. T1 - Adjuvant bisphosphonates or RANK-ligand inhibitors for patients with breast cancer and bone metastases: A systematic review and network meta-analysis JF - Critical Reviews in Oncology / Hematology N2 - Bone-modifying agents like bisphosphonates and receptor activator of nuclear factor kappaβ ligand (RANK-L) inhibitors are used as supportive treatments in breast cancer patients with bone metastases to prevent skeletal-related events (SREs). Due to missing head-to-head comparisons, a network meta-analysis was performed to provide a hierarchy of these therapeutic options. Through a systematic literature search, 21 randomized controlled trials (RCTs) that fulfilled the inclusion criteria were identified. To prevent SREs, the ranking through P-scores showed denosumab (RR: 0.62; 95%CI: 0.50-0.76), zoledronic acid (RR: 0.72; 95%CI: 0.61-0.84) and pamidronate (RR: 0.76; 95%CI: 0.67-0.85) to be significantly superior to placebo. Due to insufficient or heterogeneous data, overall survival, quality of life, pain response and adverse events were not able to be analyzed within the network. Although data were sparse on adverse events, the risk of significant adverse events appeared low. The results of this review can therefore be used to formulate clinical studies more precisely in order to standardise and focus on patient-relevant outcomes. KW - bisphosphonates KW - RANK-L inhibitors KW - SREs KW - RCTs Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-240827 VL - 137 ER - TY - JOUR A1 - Mooij, Wolf M A1 - van Wijk, Dianneke A1 - Beusen, Arthur HW A1 - Brederveld, Robert J A1 - Chang, Manqi A1 - Cobben, Marleen MP A1 - DeAngelis, Don L A1 - Downing, Andrea S A1 - Green, Pamela A1 - Gsell, Alena S A1 - Huttunen, Inese A1 - Janse, Jan H A1 - Janssen, Annette BG A1 - Hengeveld, Geerten M A1 - Kong, Xiangzhen A1 - Kramer, Lilith A1 - Kuiper, Jan J A1 - Langan, Simon J A1 - Nolet, Bart A A1 - Nuijten, Rascha JM A1 - Strokal, Maryna A1 - Troost, Tineke A A1 - van Dam, Anne A A1 - Teurlincx, Sven T1 - Modeling water quality in the Anthropocene: directions for the next-generation aquatic ecosystem models JF - Current Opinion in Environmental Sustainability N2 - “Everything changes and nothing stands still” (Heraclitus). Here we review three major improvements to freshwater aquatic ecosystem models — and ecological models in general — as water quality scenario analysis tools towards a sustainable future. To tackle the rapid and deeply connected dynamics characteristic of the Anthropocene, we argue for the inclusion of eco-evolutionary, novel ecosystem and social-ecological dynamics. These dynamics arise from adaptive responses in organisms and ecosystems to global environmental change and act at different integration levels and different time scales. We provide reasons and means to incorporate each improvement into aquatic ecosystem models. Throughout this study we refer to Lake Victoria as a microcosm of the evolving novel social-ecological systems of the Anthropocene. The Lake Victoria case clearly shows how interlinked eco-evolutionary, novel ecosystem and social-ecological dynamics are, and demonstrates the need for transdisciplinary research approaches towards global sustainability. Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-224173 VL - 36 ER - TY - JOUR A1 - Kiefer, Markus A1 - Trumpp, Natalie M. A1 - Schaitz, Caroline A1 - Reuss, Heiko A1 - Kunde, Wilfried T1 - Attentional modulation of masked semantic priming by visible and masked task cues JF - Cognition N2 - In contrast to classical theories of cognitive control, recent evidence suggests that cognitive control and unconscious automatic processing influence each other. First, masked semantic priming, an index of unconscious automatic processing, depends on attention to semantics induced by a previously executed task. Second, cognitive control operations (e.g., implementation of task sets indicating how to process a particular stimulus) can be activated by masked task cues, presented outside awareness. In this study, we combined both lines of research. We investigated in three experiments whether induction tasks and presentation of visible or masked task cues, which signal subsequent semantic or perceptual tasks but do not require induction task execution, comparably modulate masked semantic priming. In line with previous research, priming was consistently larger following execution of a semantic rather than a perceptual induction task. However, we observed in experiment 1 (masked letter cues) a reversed priming pattern following task cues (larger priming following cues signaling perceptual tasks) compared to induction tasks. Experiment 2 (visible letter cues) and experiment 3 (visible color cues) showed that this reversed priming pattern depended only on apriori associations between task cues and task elements (task set dominance), but neither on awareness nor on the verbal or non-verbal format of the cues. These results indicate that task cues have the power to modulate subsequent masked semantic priming through attentional mechanisms. Task-set dominance conceivably affects the time course of task set activation and inhibition in response to task cues and thus the direction of their modulatory effects on priming. KW - automatic processes KW - unconscious cognition KW - attentional control KW - semantic priming KW - task cue KW - task switching Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-325751 VL - 187 ER - TY - JOUR A1 - Gerber, Bertram A1 - König, Christian A1 - Fendt, Markus A1 - Andreatta, Marta A1 - Romanos, Marcel A1 - Pauli, Paul A1 - Yarali, Ayse T1 - Timing-dependent valence reversal: a principle of reinforcement processing and its possible implications JF - Current Opinion in Behavioral Sciences N2 - Punishment feels bad, but relief upon its termination feels good. As a consequence of such timing-dependent valence reversal, memories of opposite valence can result from associating stimulus A with, for example, the occurrence of punishment (A-) versus punishment termination (-A): A- training results in aversive memory, but -A training in appetitive memory (corresponding effects exist for reward occurrence and termination). Whereas learning through the occurrence of punishment is well studied, much less is known about learning through its termination. Current research investigates how dopaminergic system function contributes to these processes in Drosophila, rats and humans. We argue that dopamine-related psychopathology may entail distortions in learning through punishment termination, and that this may contribute, for example, to non-suicidal self-injury or post-traumatic stress disorder. Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-232933 VL - 26 ER - TY - JOUR A1 - Colunga, Thomas A1 - Hayworth, Miranda A1 - Kreß, Sebastian A1 - Reynolds, David M. A1 - Chen, Luoman A1 - Nazor, Kristopher L. A1 - Baur, Johannes A1 - Singh, Amar M. A1 - Loring, Jeanne F. A1 - Metzger, Marco A1 - Dalton, Stephen T1 - Human Pluripotent Stem Cell-Derived Multipotent Vascular Progenitors of the Mesothelium Lineage Have Utility in Tissue Engineering and Repair JF - Cell Reports N2 - In this report we describe a human pluripotent stem cell-derived vascular progenitor (MesoT) cell of the mesothelium lineage. MesoT cells are multipotent and generate smooth muscle cells, endothelial cells, and pericytes and self-assemble into vessel-like networks in vitro. MesoT cells transplanted into mechanically damaged neonatal mouse heart migrate into the injured tissue and contribute to nascent coronary vessels in the repair zone. When seeded onto decellularized vascular scaffolds, MesoT cells differentiate into the major vascular lineages and self-assemble into vasculature capable of supporting peripheral blood flow following transplantation. These findings demonstrate in vivo functionality and the potential utility of MesoT cells in vascular engineering applications. KW - stem cells KW - mesothelium KW - vascular progenitor KW - tissue engineering KW - regenerative medicine Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-223217 VL - 26 ER - TY - JOUR A1 - Chhatbar, Chintan A1 - Detje, Claudia N. A1 - Grabski, Elena A1 - Borst, Katharina A1 - Spanier, Julia A1 - Ghita, Luca A1 - Elliott, David A. A1 - Jordão, Marta Joana Costa A1 - Mueller, Nora A1 - Sutton, James A1 - Prajeeth, Chittappen K. A1 - Gudi, Viktoria A1 - Klein, Michael A. A1 - Prinz, Marco A1 - Bradke, Frank A1 - Stangel, Martin A1 - Kalinke, Ulrich T1 - Type I Interferon Receptor Signaling of Neurons and Astrocytes Regulates Microglia Activation during Viral Encephalitis JF - Cell Reports N2 - In sterile neuroinflammation, a pathological role is proposed for microglia, whereas in viral encephalitis, their function is not entirely clear. Many viruses exploit the odorant system and enter the CNS via the olfactory bulb (OB). Upon intranasal vesicular stomatitis virus instillation, we show an accumulation of activated microglia and monocytes in the OB. Depletion of microglia during encephalitis results in enhanced virus spread and increased lethality. Activation, proliferation, and accumulation of microglia are regulated by type I IFN receptor signaling of neurons and astrocytes, but not of microglia. Morphological analysis of myeloid cells shows that type I IFN receptor signaling of neurons has a stronger impact on the activation of myeloid cells than of astrocytes. Thus, in the infected CNS, the cross talk among neurons, astrocytes, and microglia is critical for full microglia activation and protection from lethal encephalitis. KW - encephalitis KW - regulation of microglia activation KW - neurons KW - astrocytes KW - type I IFN receptor signaling Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-222456 VL - 25 ER - TY - JOUR A1 - Kusch, Valentin A1 - Bornschein, Grit A1 - Loreth, Desiree A1 - Bank, Julia A1 - Jordan, Johannes A1 - Baur, David A1 - Watanabe, Masahiko A1 - Kulik, Akos A1 - Heckmann, Manfred A1 - Eilers, Jens A1 - Schmidt, Hartmut T1 - Munc13-3 Is Required for the Developmental Localization of Ca2+ Channels to Active Zones and the Nanopositioning of Cav2.1 Near Release Sensors JF - Cell Reports N2 - Spatial relationships between Cav channels and release sensors at active zones (AZs) are a major determinant of synaptic fidelity. They are regulated developmentally, but the underlying molecular mechanisms are largely unclear. Here, we show that Munc13-3 regulates the density of Cav2.1 and Cav2.2 channels, alters the localization of Cav2.1, and is required for the development of tight, nanodomain coupling at parallel-fiber AZs. We combined EGTA application and Ca2+-channel pharmacology in electrophysiological and two-photon Ca2+ imaging experiments with quantitative freeze-fracture immunoelectron microscopy and mathematical modeling. We found that a normally occurring developmental shift from release being dominated by Ca2+ influx through Cav2.1 and Cav2.2 channels with domain overlap and loose coupling (microdomains) to a nanodomain Cav2.1 to sensor coupling is impaired in Munc13-3-deficient synapses. Thus, at AZs lacking Munc13-3, release remained triggered by Cav2.1 and Cav2.2 microdomains, suggesting a critical role of Munc13-3 in the formation of release sites with calcium channel nanodomains. KW - coupling KW - nanodomain KW - synapse KW - active zone KW - development KW - Ca2+ channels KW - Munc13-3 KW - cerebellar cortex KW - transmitter release Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233468 VL - 22 ER - TY - JOUR A1 - Becher, Isabelle A1 - Andrés-Pons, Amparo A1 - Romanov, Natalie A1 - Stein, Frank A1 - Schramm, Maike A1 - Baudin, Florence A1 - Helm, Dominic A1 - Kurzawa, Nils A1 - Mateus, André A1 - Mackmull, Marie-Therese A1 - Typas, Athanasios A1 - Müller, Christoph W. A1 - Bork, Peer A1 - Beck, Martin A1 - Savitski, Mikhail M. T1 - Pervasive Protein Thermal Stability Variation during the Cell Cycle JF - Cell N2 - Quantitative mass spectrometry has established proteome-wide regulation of protein abundance and post-translational modifications in various biological processes. Here, we used quantitative mass spectrometry to systematically analyze the thermal stability and solubility of proteins on a proteome-wide scale during the eukaryotic cell cycle. We demonstrate pervasive variation of these biophysical parameters with most changes occurring in mitosis and G1. Various cellular pathways and components vary in thermal stability, such as cell-cycle factors, polymerases, and chromatin remodelers. We demonstrate that protein thermal stability serves as a proxy for enzyme activity, DNA binding, and complex formation in situ. Strikingly, a large cohort of intrinsically disordered and mitotically phosphorylated proteins is stabilized and solubilized in mitosis, suggesting a fundamental remodeling of the biophysical environment of the mitotic cell. Our data represent a rich resource for cell, structural, and systems biologists interested in proteome regulation during biological transitions. KW - thermal proteome profiling KW - cell cycle KW - proteomics Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-221565 VL - 173 ER - TY - JOUR A1 - Fazeli, Gholamreza A1 - Stetter, Maurice A1 - Lisack, Jaime N. A1 - Wehman, Ann M. T1 - C. elegans Blastomeres Clear the Corpse of the Second Polar Body by LC3-Associated Phagocytosis JF - Cell Reports N2 - To understand how undifferentiated pluripotent cells cope with cell corpses, we examined the clearance of polar bodies born during female meiosis. We found that polar bodies lose membrane integrity and expose phosphatidylserine in Caenorhabditis elegans. Polar body signaling recruits engulfment receptors to the plasma membrane of embryonic blastomeres using the PI3K VPS-34, RAB-5 GTPase and the sorting nexin SNX-6. The second polar body is then phagocytosed using receptor-mediated engulfment pathways dependent on the Rac1 ortholog CED-10 but undergoes non-apoptotic programmed cell death independent of engulfment. RAB-7 GTPase is required for lysosome recruitment to the polar body phagosome, while LC3 lipidation is required for degradation of the corpse membrane after lysosome fusion. The polar body phagolysosome vesiculates in an mTOR- and ARL-8-dependent manner, which assists its timely degradation. Thus, we established a genetic model to study clearance by LC3-associated phagocytosis and reveal insights into the mechanisms of phagosome maturation and degradation. KW - cell corpse clearance KW - phagosome maturation KW - LC3-associated phagocytosis KW - lysosomal degradation KW - phagolysosome tubulation KW - polar body KW - non-canonical autophagy KW - non-apoptotic programmed cell death Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-227651 VL - 23 ER - TY - JOUR A1 - Liese, J. G. A1 - Schoen, C. A1 - van der Linden, M. A1 - Lehmann, L. A1 - Goettler, D. A1 - Keller, S. A1 - Maier, A. A1 - Segerer, F. A1 - Rose, M. A. A1 - Streng, A. T1 - Changes in the incidence and bacterial aetiology of paediatric parapneumonic pleural effusions/empyema in Germany, 2010–2017: a nationwide surveillance study JF - Clinical Microbiology and Infection N2 - Objectives Parapneumonic pleural effusions/empyema (PPE/PE) are severe complications of community-acquired pneumonia. We investigated the bacterial aetiology and incidence of paediatric PPE/PE in Germany after the introduction of universal pneumococcal conjugate vaccine (PCV) immunization for infants. Methods Children <18 years of age hospitalized with pneumonia-associated PPE/PE necessitating pleural drainage or persisting >7 days were reported to the German Surveillance Unit for Rare Diseases in Childhood between October 2010 and June 2017. All bacteria detected in blood or pleural fluid (by culture/PCR) were included, with serotyping for Streptococcus pneumoniae. Results The median age of all 1447 PPE/PE patients was 5 years (interquartile range 3–10). In 488 of the 1447 children with PPE/PE (34%), 541 bacteria (>40 species) were detected. Aerobic gram-positive cocci accounted for 469 of 541 bacteria detected (87%); these were most frequently Streptococcus pneumoniae (41%), Streptococcus pyogenes (19%) and Staphylococcus aureus (6%). Serotype 3 accounted for 45% of 78 serotyped S. pneumoniae strains. Annual PPE/PE incidence varied between 14 (95%CI 12–16) and 18 (95%CI 16–21) PPE/PE per million children. Incidence of S. pneumoniae PPE/PE decreased from 3.5 (95%CI 2.5–4.6) per million children in 2010/11 to 1.5 (95%CI 0.9–2.4) in 2013/14 (p 0.002), followed by a re-increase to 2.2 (95%CI 1.5–3.2) by 2016/17 (p 0.205). Conclusions In the era of widespread PCV immunization, cases of paediatric PPE/PE were still caused mainly by S. pneumoniae and, increasingly, by S. pyogenes. The re-increase in the incidence of PPE/PE overall and in S. pneumoniae-associated PPE/PE indicates ongoing changes in the bacterial aetiology and requires further surveillance. KW - pleural empyema KW - pleural fluid KW - parapneumonic pleural effusion KW - Streptococcus pneumoniae KW - Streptococcus pyogenes KW - children Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-236866 VL - 25 ER - TY - JOUR A1 - Eisenhofer, Graeme A1 - Peitzsch, Mirko A1 - Kaden, Denise A1 - Langton, Katharina A1 - Mangelis, Anastasios A1 - Pamporaki, Christina A1 - Masjkur, Jimmy A1 - Geroula, Aikaterini A1 - Kurlbaum, Max A1 - Deutschbein, Timo A1 - Beuschlein, Felix A1 - Prejbisz, Aleksander A1 - Bornstein, Stefan R. A1 - Lenders, Jacques W. M. T1 - Reference intervals for LC-MS/MS measurements of plasma free, urinary free and urinary acid-hydrolyzed deconjugated normetanephrine, metanephrine and methoxytyramine JF - Clinica Chimica Acta N2 - Background Plasma or urinary metanephrines are recommended for screening of pheochromocytomas and paragangliomas (PPGLs). Measurements of urinary free rather than deconjugated metanephrines and additional measurements of methoxytyramine represent other developments. For all measurements there is need for reference intervals. Methods Plasma free, urinary free and urinary deconjugated O-methylated catecholamine metabolites were measured by LC-MS/MS in specimens from 590 hypertensives and normotensives. Reference intervals were optimized using data from 2,056 patients tested for PPGLs. Results Multivariate analyses, correcting for age and body surface area, indicated higher plasma and urinary metanephrine in males than females and sex differences in urinary normetanephrine and free methoxytyramine that largely reflected body size variation. There were positive associations of age with plasma metabolites, but negative relationships with urinary free metanephrine and methoxytyramine. Plasma and urinary normetanephrine were higher in hypertensives than normotensives, but differences were small. Optimization of reference intervals using the data from patients tested for PPGLs indicated that age was the most important consideration for plasma normetanephrine and sex most practical for urinary metabolites. Conclusion This study clarifies impacts of demographic and anthropometric variables on catecholamine metabolites, verifies use of age-specific reference intervals for plasma normetanephrine and establishes sex-specific reference intervals for urinary metabolites. KW - liquid chromatography tandem mass spectrometry (LC-MS/MS) KW - normetanephrine KW - metanephrine KW - methoxytyramine KW - reference intervals KW - age Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-226598 VL - 490 ER - TY - JOUR A1 - Casarotto, Silvia A1 - Turco, Francesco A1 - Comanducci, Angela A1 - Perretti, Alessio A1 - Marotta, Giorgio A1 - Pezzoli, Gianni A1 - Rosanova, Mario A1 - Isaias, Ioannis U. T1 - Excitability of the supplementary motor area in Parkinson's disease depends on subcortical damage JF - Brain Stimulation N2 - Background Cortical dysfunctioning significantly contributes to the pathogenesis of motor symptoms in Parkinson's disease (PD). Objective We aimed at testing whether an acute levodopa administration has measurable and specific cortical effects possibly related to striatal dopaminergic deficit. Methods In thirteen PD patients, we measured the electroencephalographic responses to transcranial magnetic stimulation (TMS/EEG) of the supplementary motor area and superior parietal lobule (n = 8) before and after an acute intake of levodopa. We also performed a single-photon emission computed tomography and [123I]N-ω-fluoropropyl-2β-carbomethoxy-3β-(4-iodophenyl)nortropane to identify the more affected and the less affected brain side in each patient, according to the dopaminergic innervation loss of the putamen. Cortical excitability changes before and after an acute intake of levodopa were computed and compared between the more and the less affected brain side at the single-patient as well as at the group level. Results We found that levodopa intake induces a significant increase (P < 0.01) of cortical excitability nearby the supplementary motor area in the more affected brain side, greater (P < 0.025) than in the less affected brain side. Notably, cortical excitability changes nearby the superior parietal lobule were not statistically significant. Conclusions These results strengthen the idea that dysfunction of specific cortico-subcortical circuits may contribute to pathophysiology of PD symptoms. Most important, they support the use of navigated TMS/EEG as a non-invasive tool to better understand the pathophysiology of PD. KW - transcranial magnetic stimulation KW - electroencephalography KW - levodopa KW - dopamine KW - putamen Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-222261 VL - 12 ER - TY - JOUR A1 - Barkhuizen, Melinda A1 - van Mechelen, Ralph A1 - Vermeer, Marijne A1 - Chedraui, Peter A1 - Paes, Dean A1 - van den Hove, Daniel L. A. A1 - Vaes, Bart A1 - Mays, Robert W. A1 - Steinbusch, Harry W. M. A1 - Robertson, Nicola J. A1 - Kramer, Boris W. A1 - Gavilanes, Antonio W. D. T1 - Systemic multipotent adult progenitor cells improve long-term neurodevelopmental outcomes after preterm hypoxic-ischemic encephalopathy JF - Behavioural Brain Research N2 - There is an urgent need for therapies that could reduce the disease burden of preterm hypoxic-ischemic encephalopathy. Here, we evaluate the long-term effects of multipotent adult progenitor cells (MAPC) on long-term behavioral outcomes in a preterm rat model of perinatal asphyxia. Rats of both sexes were treated with two doses of MAPCs within 24 h after the insult. Locomotor, cognitive and psychiatric impairments were evaluated starting at 1.5 (juvenile) and 6 months (adult). Hypoxia-ischemia affected locomotion, cognition, and anxiety in a sex-dependent manner, with higher vulnerability observed in males. The MAPC therapy partially attenuated deficits in object recognition memory in females of all tested ages, and in the adult males. The hypoxic insult caused delayed hyperactivity in adult males, which was corrected by MAPC therapy. These results suggest that MAPCs may have long-term benefits for neurodevelopmental outcome after preterm birth and global hypoxia-ischemia, which warrants further preclinical exploration. KW - hypoxic-ischemic encephalopathy KW - preterm brain KW - stem cell therapy KW - neurodevelopment Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-221506 VL - 362 ER - TY - JOUR A1 - Stein, Anthony S. A1 - Kantarjian, Hagop A1 - Gökbuget, Nicola A1 - Bargou, Ralf A1 - Litzow, Mark R. A1 - Rambaldi, Alessandro A1 - Ribera, Josep-Maria A1 - Zhang, Alicia A1 - Zimmerman, Zachary A1 - Zugmaier, Gerhard A1 - Topp, Max S. T1 - Blinatumomab for Acute Lymphoblastic Leukemia Relapse after Allogeneic Hematopoietic Stem Cell Transplantation JF - Biology of Blood and Marrow Transplantation N2 - Patients with relapsed/refractory (R/R) acute lymphoblastic leukemia (ALL) following allogeneic hematopoietic stem cell transplantation (alloHSCT) have a poor prognosis, and alternative therapies are needed for this patient population. Blinatumomab, a bispecific T cell engager immunotherapy, was evaluated in an open-label, single-arm, phase II study of adults with R/R Philadelphia chromosome-negative B cell precursor ALL and resulted in a rate of complete remission (CR) or CR with partial hematologic recovery of peripheral blood counts (CRh) of 43% within 2 treatment cycles. We conducted an exploratory analysis to determine the efficacy and safety of blinatumomab in 64 patients who had relapsed following alloHSCT before enrollment in the phase II study. Forty-five percent of the patients (29 of 64) achieved a CR/CRh within the first 2 cycles of treatment, 22 of whom had a minimal residual disease (MRD) response (including 19 with a complete MRD response). After 1 year and 3 years of follow-up, the median relapse-free survival was 7.4 months for patients who achieved CR/CRh in the first 2 cycles, and the median overall survival was 8.5 months; overall survival rate (Kaplan-Meier estimate) was 36% at 1 year and 18% at 3 years. Grade 3 and 4 adverse events were reported in 20 patients (31%) and 28 patients (44%), respectively, with grade 3 and 4 neurologic events in 8 and 2 patients, respectively, and grade 3 cytokine release syndrome in 2 patients. Eight patients had fatal adverse events, including 5 due to infections. Seven patients had grade ≤ 3 graft-versus-host disease during the study, none of which resulted in the discontinuation of blinatumomab or hospitalization. Our data suggest that blinatumomab is an effective salvage therapy in this patient population. KW - blinatumomab KW - Philadelphia chromosome-negative B precursor ALL KW - efficacy KW - safety KW - allogeneic hematopoietic stem cell transplantation Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-239510 VL - 25 ER - TY - JOUR A1 - Gohla, Antje T1 - Do metabolic HAD phosphatases moonlight as protein phosphatases? JF - BBA - Molecular Cell Research N2 - Mammalian haloacid dehalogenase (HAD)-type phosphatases have evolved to dephosphorylate a wide range of small metabolites, but can also target macromolecules such as serine/threonine, tyrosine-, and histidine-phosphorylated proteins. To accomplish these tasks, HAD phosphatases are equipped with cap domains that control access to the active site and provide substrate specificity determinants. A number of capped HAD phosphatases impact protein phosphorylation, although structural data are consistent with small metabolite substrates rather than protein substrates. This review discusses the structures, functions and disease implications of the three closely related, capped HAD phosphatases pyridoxal phosphatase (PDXP or chronophin), phosphoglycolate phosphatase (PGP, also termed AUM or glycerol phosphatase) and phospholysine phosphohistidine inorganic pyrophosphate phosphatase (LHPP or HDHD2B). Evidence in support of small metabolite and protein phosphatase activity is discussed in the context of the diversity of their biological functions. KW - actin cytoskeleton KW - cancer KW - haloacid dehalogenase-type phosphatase KW - major depression KW - metabolism KW - vitamin B6 Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233168 VL - 1866 ER - TY - JOUR A1 - Jeanclos, Elisabeth A1 - Albersen, Monique A1 - Ramos, Rúben J. J. A1 - Raab, Annette A1 - Wilhelm, Christian A1 - Hommers, Leif A1 - Lesch, Klaus-Peter A1 - Verhoeven-Duif, Nanda M. A1 - Gohla, Antje T1 - Improved cognition, mild anxiety-like behavior and decreased motor performance in pyridoxal phosphatase-deficient mice JF - BBA - Molecular Basis of Disease N2 - Pyridoxal 5′-phosphate (PLP) is an essential cofactor in the catalysis of ~140 different enzymatic reactions. A pharmacological elevation of cellular PLP concentrations is of interest in neuropsychiatric diseases, but whole-body consequences of higher intracellular PLP levels are unknown. To address this question, we have generated mice allowing a conditional ablation of the PLP phosphatase PDXP. Ubiquitous PDXP deletion increased PLP levels in brain, skeletal muscle and red blood cells up to 3-fold compared to control mice, demonstrating that PDXP acts as a major regulator of cellular PLP concentrations in vivo. Neurotransmitter analysis revealed that the concentrations of dopamine, serotonin, epinephrine and glutamate were unchanged in the brains of PDXP knockout mice. However, the levels of γ-aminobutyric acid (GABA) increased by ~20%, demonstrating that elevated PLP levels can drive additional GABA production. Behavioral phenotyping of PDXP knockout mice revealed improved spatial learning and memory, and a mild anxiety-like behavior. Consistent with elevated GABA levels in the brain, PDXP loss in neural cells decreased performance in motor tests, whereas PDXP-deficiency in skeletal muscle increased grip strength. Our findings suggest that PDXP is involved in the fine-tuning of GABA biosynthesis. Pharmacological inhibition of PDXP might correct the excitatory/inhibitory imbalance in some neuropsychiatric diseases. KW - pyridoxal phosphatase KW - vitamin B6 KW - γ-Aminobutyric acid (GABA) KW - motor performance KW - neuropsychiatric diseases KW - neurotransmitter biosynthesis Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-323396 VL - 1865 ER - TY - JOUR A1 - Hochleitner, Gernot A1 - Chen, Fei A1 - Blum, Carina A1 - Dalton, Paul D. A1 - Amsden, Brian A1 - Groll, Jürgen T1 - Melt electrowriting below the critical translation speed to fabricate crimped elastomer scaffolds with non-linear extension behaviour mimicking that of ligaments and tendons JF - Acta Biomaterialia N2 - Abstract Ligaments and tendons are comprised of aligned, crimped collagen fibrils that provide tissue-specific mechanical properties with non-linear extension behaviour, exhibiting low stress at initial strain (toe region behaviour). To approximate this behaviour, we report fibrous scaffolds with sinusoidal patterns by melt electrowriting (MEW) below the critical translation speed (CTS) by exploitation of the natural flow behaviour of the polymer melt. More specifically, we synthesised photopolymerizable poly(L-lactide-co-ε-caprolactone-co-acryloyl carbonate) (p(LLA-co-ε-CL-co-AC)) and poly(ε-caprolactone-co-acryloyl carbonate) (p(ε-CL-co-AC)) by ring-opening polymerization (ROP). Single fibre (fØ = 26.8 ± 1.9 µm) tensile testing revealed a customisable toe region with Young’s Moduli ranging from E = 29 ± 17 MPa for the most crimped structures to E = 314 ± 157 MPa for straight fibres. This toe region extended to scaffolds containing multiple fibres, while the sinusoidal pattern could be influenced by printing speed. The synthesized polymers were cytocompatible and exhibited a tensile strength of σ = 26 ± 7 MPa after 104 cycles of preloading at 10% strain while retaining the distinct toe region commonly observed in native ligaments and tendon tissue. Statement of Significance Damaged tendons and ligaments are serious and frequently occurring injuries worldwide. Recent therapies, including autologous grafts, still have severe disadvantages leading to a demand for synthetic alternatives. Materials envisioned to induce tendon and ligament regeneration should be degradable, cytocompatible and mimic the ultrastructural and mechanical properties of the native tissue. Specifically, we utilised photo-cross-linkable polymers for additive manufacturing (AM) with MEW. In this way, we were able to direct-write cytocompatible fibres of a few micrometres thickness into crimp-structured elastomer scaffolds that mimic the non-linear biomechanical behaviour of tendon and ligament tissue. KW - crimp structure KW - biomimetic scaffolds KW - toe region mechanical behaviour KW - melt electrowriting (MEW) KW - photo-cross-linkable elastomer Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-320846 VL - 72 ER - TY - THES A1 - Zhu, Yan T1 - Small RNA-associated RNA-binding proteins in \(Fusobacterium\) \(nucleatum\) T1 - Kleine RNA-assoziierte RNA-bindende Proteine in \(Fusobacterium\) \(nucleatum\) N2 - Fusobacterium nucleatum is an emerging cancer-associated bacterium belonging to the Fusobacteriota phylum, which is evolutionary distant from all model bacteria. Recent analysis generated global fusobacterial RNA maps, which enabled the discovery of 24 small noncoding RNAs (sRNAs) in F. nucleatum. Notably, the σE-dependent sRNA FoxI and FoxJ act as a posttranscriptional regulator of several cell envelope proteins. The σE-dependent sRNAs in Escherichia coli and Salmonella require the RNA chaperone Hfq for their functions. Intriguingly, F. nucleatum seems to have no homologs of the three common RNA-binding proteins (RBPs) CsrA, Hfq and ProQ. However, it remains unclear if other families of RBPs act in concert with FoxI, FoxJ and other fusobacterial sRNAs. This work has successfully established a 14-mer capture tagged-sRNA affinity purification procedure initially using 6S RNA as a proof-of-concept. Applying this method to 19 different F. nucleatum sRNAs led to a comprehensive mapping of sRNA-binding proteins in this bacterium. This screen identified a total of 75 proteins significantly enriched across all sRNAs and prominent in ribosomal proteins, uncharacterized proteins and enzymes associated with metabolism. This work further focused on the homologs of two KH domain proteins KhpA and KhpB, which were recently recognized as global RBPs in various Gram-positive bacteria such as Streptococcus pneumoniae, Clostridioides difficile, and Enterococcus faecalis. Comparative analyses revealed conserved domain composition and gene synteny of KhpA and KhpB across F. nucleatum, S. pneumoniae, C. difficle and E. faecalis, indicating conserved roles of these proteins in bacteria. Further protein-protein interaction assays and global RNA targets profiling demonstrated that KhpA and KhpB form dimers and act together as broad RBPs, binding to sRNAs, mRNAs and tRNAs in F. nucleatum. Further functional characterizations unveiled that KhpA/B are required for the growth of F. nucleatum under nutrient limitation conditions and impact cell morphology. Additionally, the two RBPs also influence global gene expression in F. nucleatum affecting various bacterial physiological processes, including ethanolamine utilization. In summary, this work established a sRNA-centric approach for screening sRNA-binding proteins in F. nucleatum. Further, the assay could be applied in other non-model organisms and is feasible to screen multiple sRNA baits in parallel for sRNA-interactors. By applying this procedure to nearly all known fusobacterial sRNAs, this work generated an extensive map of sRNA-interacting proteins in F. nucleatum. Molecular and genetic studies identified that KhpA/B act as major RBPs and gene regulators in F. nucleatum, representing important first steps in elucidating key players of post-transcriptional control at the root of the bacterial phylogenetic tree. N2 - Fusobacterium nucleatum ist ein relevantes krebsassoziiertes Bakterium des Phylums Fusobacteriota, welches sich evolutionär von allen anderen Modellbakterien abgrenzt. In einer kürzlich durchgeführten Analyse wurden fusobakterielle RNAs global kartiert, was die Entdeckung von 24 kleinen nichtkodierenden RNAs (sRNAs) in F. nucleatum ermöglichte. Besonders hervorzuheben ist die σE-abhängige sRNAs FoxI und FoxJ, die als posttranskriptioneller Regulator von mehreren Proteine der Zellhülle fungiert. Die σE-abhängigen sRNAs in Escherichia coli und Salmonella benötigen das RNA-Chaperonprotein Hfq für ihre Funktionen. Interessanterweise scheint F. nucleatum aber keine Homologe der drei verbreiteten RNA-Bindeproteine (RBPs) CsrA, Hfq und ProQ zu besitzen. Es bleibt jedoch unklar, ob andere RBP-Familien mit FoxI, FoxJ und sonstigen fusobakteriellen sRNAs interagieren. Diese Arbeit hat erfolgreich ein 14-mer Capture-Markierung basierendes sRNA Affinitätsreinigungsverfahren etabliert, das zunächst unter Verwendung von 6S RNA erprobt wurde. Die Anwendung dieser Methode auf 19 verschiedene sRNAs in F. nucleatum führte zu einer umfassenden Übersicht von sRNA-bindenden Proteinen in diesem Bakterium. Unter allen sRNAs konnten mit Hilfe dieses Screenings insgesamt 75 signifikant angereicherte Proteine identifiziert werden, so vor allem ribosomale Proteine, uncharakterisierte Proteine und Metabolismus-assoziierte Enzyme. Diese Arbeit konzentrierte sich weiterführend auf die Homologe der zwei KH-Domänenproteine KhpA und KhpB, die kürzlich als globale RBPs in verschiedenen Gram-positiven Bakterien, wie Streptococcus pneumoniae, Clostridioides difficile und Enterococcus faecalis beschrieben wurden. Vergleichende Analysen bewiesen eine konservierte Domänenzusammensetzung und Gensyntenie von KhpA und KhpB in F. nucleatum, S. pneumoniae, C. difficile und E. faecalis, was wiederum auf konservierte Funktionen dieser Proteine in Bakterien hinweist. Weitere Protein-Protein-Interaktionsassays und globale Assays zur Identifizierung der Ziel-RNAs zeigten, dass KhpA und KhpB Dimere bilden und gemeinsam als umfangreiche RBPs wirken, die an sRNAs, mRNAs und tRNAs in F. nucleatum binden. Funktionelle Charakterisierungen der Proteine ergaben, dass KhpA/B für das Wachstum von F. nucleatum unter Nährstoffmangel erforderlich sind und die Zellmorphologie beeinflussen. Zusätzlich spielen die beiden RBPs auch eine Rolle in der globalen Genexpression in F. nucleatum und wirken sich auf verschiedene physiologische Prozesse aus, einschließlich der Ethanolamin-Nutzung. Zusammenfassend etablierte diese Arbeit einen sRNA-orientierten Ansatz zur Untersuchung von sRNA-Bindeproteinen in F. nucleatum. Darüber hinaus kann dieser Ansatz potenziell in anderen Nicht-Modellorganismen angewendet werden und eignet sich um mehrere sRNA-Baits parallel auf deren sRNA-Interaktionspartner zu untersuchen. Durch die Anwendung dieses Verfahrens auf nahezu allen bekannten fusobakteriellen sRNAs wurde eine umfangreiche Kartierung der sRNA-Interaktoren in F. nucleatum generiert. Die hier beschriebenen molekularen und genetischen Studien, in welchen KhpA/B als wichtige RBPs und Genregulatoren von F. nucleatum identifiziert wurden, stellen wichtige erste Schritte bei der Aufklärung der Schlüsselakteure der posttranskriptionellen Kontrolle am Ursprung des bakteriellen Stammbaums dar. KW - Fusobacterium nucleatum KW - RNA-binding proteins KW - Small non-coding RNAs KW - Proteine Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370731 ER - TY - THES A1 - Drakopoulos, Antonios T1 - Opioid receptor oligomerization study through fluorescent selective ligands T1 - Untersuchung der Opioid Rezeptor Oligomerisierung mittels fluoreszierender selektiver Liganden N2 - Opioid receptors (ORs) are among the most intensively studied members of the G protein-coupled receptor (GPCR) family due to their important role in pain management and their involvement in psychological and neurological disorders. However, currently available opioid drugs exhibit both serious drawbacks, such as addiction, and life-threatening side effects, such as respiratory depression. Contrary to the classic monomeric model, indirect evidence suggests that ORs might form dimers, which could be endowed with a distinct pharmacological profile, and, thus, be exploited to develop innovative drugs. However, direct evidence for the spontaneous formation of OR dimers in living cells under physiological condition are missing. The focus of this thesis was the design, synthesis and characterization of new, highly subtype-selective OR fluorescent ligands to be used as tools for state-of-the-art microscopy methods, such as single molecule microscopy (SMM), in heterologous cells and potentially in native tissue, in order to investigate OR organization and mobility on the surface of intact, living cells, at low/physiological expression levels. The μOR is the OR subtype which plays the most critical role in pain modulation, while mediating the effects of the most powerful analgesic drugs. Also, it is the OR subtype which is mostly responsible for the major adverse effects of the currently marketed opioid drugs. We aimed to develop a new μOR-selective fluorescent ligand with a potential irreversible binding mode. Although the approach was in principle successful, i.e. the labelled cells were visible and distinguishable; this initial attempt was not suitable for SMM due to the ligands’ poor selectivity and affinity as well as due to its high background noise. A second generation of the fluorescent ligand was designed; however the synthesis and characterization are part of another doctoral thesis. Lately, δOR has received attention as a promising drug target, due to its distinct pharmacological profile which features low abuse liability and lack of physical dependence. In addition, δOR expression has been associated with cancer regulation in the periphery, thus further highlighting the interest of imaging tools for this receptor. In this thesis, the development and characterization of two new δOR-selective fluorescent probes with excellent optical properties, based on the well-studied ligand naltrindole (NTI) is presented. Their application in SMM studies is currently underway at the group of Prof. Dr. Davide Calebiro at the University of Birmingham. The κOR is a subtype which has also emerged as a drug target due to its low abuse potential. Despite a growing interest in this receptor, κOR-selective fluorescent probes have been particularly scarce in literature. Herein, the design, synthesis and characterization of the first reported set of fluorescent κOR-selective probes with antagonistic properties, based on the established ligand 5’-guanidinonaltrindole (5’-GNTI) is presented. Two of these were employed for SMM experiments to investigate κOR homodimerization, localization and trafficking. Our findings do not support homodimerization of the κOR-bound probe complexes, while showing that the majority of them follow a normal Brownian diffusion on the cell surface. N2 - Opioid-Rezeptoren (OR) gehören aufgrund ihrer wesentlichen Rolle bei der Schmerztherapie und ihrer Beteiligung an physiologischen und neurologischen Störungen zu den am intensivsten untersuchten Mitgliedern der G-Protein-gekoppelten Rezeptor (GPCR) Familie. Jedoch haben aktuell erhältliche Opioid-Arzneimittel schwerwiegende Nachteile, wie Abhängigkeit, und lebensbedrohliche Nebenwirkungen, wie Atemdepression. Im Gegensatz zu dem klassischen Monomer-Modell legen indirekte Hinweise nahe, dass ORs Dimere formen können, welche mit einem spezifischen pharmakologischen Profil ausgestattet sein könnten und daher für die Entwicklung innovativer Arzneimittel verwendet werden könnten. Jedoch gibt es keinen direkten Beweis für die spontane Bildung von OR-Dimeren in lebenden Zellen unter physiologischen Bedingungen. Der Fokus dieser Doktorarbeit war daher das Design, die Synthese und Charakterisierung von neuen hoch subtyp-selektiven fluoreszierenden OR Liganden, welche als Hilfsmittel für hochmoderne Mikroskopie-Anwendungen Anwendung finden sollen, wie Einzelmolekül-Mikroskopie (EMM) in heterologen Zellen und potentiell in nativem Gewebe, um OR-Organisierung und Mobilität auf der Oberfläche von intakten lebenden Zellen bei niedrigen/physiologischen Expressions-Spiegeln zu untersuchen. Der μOR ist der OR Subtyp, der die entscheidenste Rolle bei der Schmerzmodulierung spielt, indem er die Wirkung der stärksten analgetischen Arzneien vermittelt. Des Weiteren ist dieser OR-Subtyp der Subtyp, der größtenteils für die wesentlichen unerwünschten Nebenwirkungen der aktuell vermarkteten Opioid-Arzneimittel verantwortlich ist. Das Ziel dieser Arbeit war daher, einen neuen μOR-selektiven fluoreszierenden Liganden mit einem potentiell irreversiblen Bindungsmodus zu entwickeln. Obwohl dieser Ansatz prinzipiell erfolgreich war, das heißt die markierten Zellen waren sicht- und unterscheidbar, war dieser erste Ansatz aufgrund der geringen Selektivität und Affinität des Liganden und aufgrund seines hohen Hintergrundrauschens nicht für EMM geeignet. Daher wurde eine zweite Generation fluoreszierender Liganden entworfen. Deren Synthese und Charakterisierung ist jedoch Teil einer anderen Doktorarbeit. Kürzlich erhielt der δOR aufgrund seines spezifischen pharmakologischen Profils, welches ein geringes Missbrauchsrisiko und das Fehlen körperlicher Abhängigkeit beinhaltet, vielseitige Beachtung als ein vielversprechendes Arznei-Target. Des Weiteren wurde δOR-Expression mit Krebsregulation in der Peripherie assoziiert, was das Interesse an einem bildgebenden Werkzeug für diesen Rezeptor zusätzlich unterstreicht. In dieser Doktorarbeit wird die Entwicklung und Charakterisierung von zwei neuen, auf dem gut untersuchten Liganden Naltrindol (NTI) basierenden, δOR-selektiven fluoreszierenden Sonden mit sehr guten optischen Eigenschaften gezeigt. Ihre Anwendung in EMM Untersuchungen läuft derzeit bei Kooperationspartnern im Arbeitskreis von Professor Davide Calebiro an der Universität Birmingham an. Der κOR ist der Subtyp, der auch als Arznei-Target aufgrund seines geringen Missbrauchspotentials in Erscheinung getreten ist. Obwohl steigendes Interesse an diesem Rezeptor besteht, sind κOR-selektive fluoreszierende Sonden in der Literatur bisher kaum beschrieben. In dieser Arbeit wird das Design, die Synthese und Charakterisierung des ersten beschriebenen Sets von fluoreszierenden κOR-selektiven Sonden mit antagonistischen Eigenschaften, basierend auf dem Liganden 5’-Guanidinonaltrindol (5’-GNTI) gezeigt. Zwei dieser Liganden wurden für EMM Experimente verwendet, um die κOR Homodimerisierung, Lokalisation und Transportwege zu untersuchen. Unsere Ergebnisse zeigen keine Homodimerisierung des κOR-gebundenen Sondenkomplexes und außerdem, dass die Mehrheit der Rezeptoren einer normalen Brown’schen Diffusion auf der Zelloberfläche folgt. KW - Opioidrezeptor KW - fluorescent ligands KW - opioid receptors KW - TIRF microscopy KW - GPCR oligomerization KW - Oligomerisation KW - Ligand KW - Fluoreszierende Liganden KW - GPCR Oligomerisierung Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-207179 ER - TY - JOUR T1 - Measurement of prompt photon production in √ s(NN) = 8.16 TeV \(p\) Pb collisions with ATLAS JF - Physics letters B N2 - The inclusive production rates of isolated, prompt photons in p Pb collisions at root s(NN) = 8.16 TeV are studied with the ATLAS detector at the Large Hadron Collider using a dataset with an integrated luminosity of 165 nb(-1) recorded in 2016. The cross-section and nuclear modification factor R-p pb are measured as a function of photon transverse energy from 20 GeV to 550 GeV and in three nucleon-nucleon centre-of-mass pseudorapidity regions, (-2.83, -2.02), (-1.84, 0.91), and (1.09, 1.90). The cross-section and R-p pb values are compared with the results of a next-to-leading-order perturbative QCD calculation, with and without nuclear parton distribution function modifications, and with expectations based on a model of the energy loss of partons prior to the hard scattering. The data disfavour a large amount of energy loss and provide new constraints on the parton densities in nuclei. (C) 2019 The Author. Published by Elsevier B.V. KW - Boson Production KW - PPB Collisions Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-312697 VL - 796 ER - TY - GEN A1 - Aichele, Thorsten A1 - Heurich, Tina A1 - Müller, Noemi A1 - Odenbreit, Carina A1 - Radičević, Jana A1 - Raith, Sarah A1 - Röseler, Christoph A1 - Zaus, Petra T1 - 7 + 4. SEED – Scenarios for the Use of ePortfolios in Digital Learning N2 - The SEED project is developing ePortfolios for teaching at the Julius-Maximilians-Universität Würzburg. ePortfolios make it possible to further develop teaching and learning in a competence-oriented manner and to strengthen the individual reflection aspect of academic studies to support training professional skills. A total of seven use cases were developed. They provide examples of how ePortfolios can be used in university teaching. Four exam variants help to illustrate both subject-specific and reflective components when examining using ePortfolios. KW - ePortfolio KW - action orientation KW - theory-praxis-transfer KW - reflective practice KW - peer-feedback KW - collaborative work KW - Handlungsorientierung Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370091 N1 - Deutsche Ausgabe unter https://doi.org/10.25972/OPUS-37007 ER - TY - THES A1 - Steinmüller, Sophie Anna Maria T1 - Benzimidazole-Based Photoswitches and Photoswitchable Cannabinoid 2 Receptor Ligands T1 - Benzimidazol-Basierte Photoschalter und Photoschaltbare Liganden für den Cannabinoid 2 Rezeptor N2 - The field of photopharmacology has attracted considerable attention due to applying the spatial and temporal precision of light to pharmacological systems. Photoswitchable biologically active compounds have proven useful in the field of G protein-coupled receptors (GPCRs), which are of tremendous therapeutic relevance. Generally, the pharmacology of GPCRs is complex, perhaps even more complex than originally thought. Suitable tools are required to dissect the different signalling pathways and mechanisms and to unravel how they are connected in a holistic image. This is reflected in the enormous scientific interest in CB2R, as the neuroprotective and immunomodulatory effects attributed to CB2R agonists have not yet translated into effective therapeutics. This work focused on the development of a novel photoswitchable scaffold based on the privileged structure of benzimidazole and its application in photoswitchable CB2R ligands as photopharmacological tools for studying the CB2R. The visible-light photoswitchable ligand 10d enables the investigation of CB2R activation with regard to βarr2 bias, exhibiting a unique pharmacological profile as a “cis-on” affinity switch at receptor level and as a “trans-on” efficacy-switch in βarr2-mediated receptor internalization. The novel photoswitchable scaffold developed in this work further serves as a guide for the development of novel photoswitchable GPCR ligands based on the privileged structure of benzimidazole. To obtain a different tool compound for studying CB2R activation and signalling mechanisms, a previously reported putatively dualsteric CB2R ligand was rendered photoswitchable, by linking the orthosteric agonist to a CB2R-selective PAM via photoswitchable azobenzene. Compound 27-para exhibits a desirable “cis-on” behaviour across all investigated assays with >10-fold higher potency compared to its trans-isomer and can be used as an efficacy-switch employing specific concentrations. N2 - Das Forschungsfeld der Photopharmakologie hat stark an Beachtung gewonnen, da es die Anwendung der räumlichen und zeitlichen Präzision von Licht auf pharmakologische Systeme ermöglicht. Photoschaltbare biologisch aktive Verbindungen haben sich besonders für die Erforschung von G-Protein-gekoppelten Rezeptoren (GPCRs) als nützlich erwiesen, welche sich durch ihr enormes therapeutisches Potenzial auszeichnen. Die Pharmakologie der GPCRs ist komplex, vielleicht sogar komplexer als ursprünglich angenommen. Um die verschiedenen Signalwege und Mechanismen zu verstehen und zu entschlüsseln, wie sie in einem ganzheitlichen Bild zusammenhängen, werden geeignete Instrumente benötigt. Dies zeigt sich auch in dem enormen wissenschaftlichen Interesse am CB2R, da die den CB2R-Agonisten zugeschriebenen neuroprotektiven und immunmodulatorischen Effekte noch nicht in wirksame Therapeutika umgesetzt werden konnten. Die vorliegende Arbeit konzentrierte sich auf die Entwicklung eines neuartigen photoschaltbaren Gerüsts, das auf der privilegierten Struktur von Benzimidazol basiert, und dessen Anwendung in photoschaltbaren CB2R-Liganden als photopharmakologische Werkzeuge zur Untersuchung des CB2R. Der mit sichtbarem Licht schaltbare Ligand 10d ermöglicht die Untersuchung der CB2R-Aktivierung in Hinblick auf bevorzugte βarr2-Rekrutierung gegenüber G-Proteinen, mit einem einzigartigen pharmakologischen Profil als „cis-on"-Affinitätsschalter auf Rezeptorebene und als „trans-on"-Wirksamkeitsschalter bei der βarr2-vermittelten Rezeptorinternalisierung. Das in dieser Arbeit entwickelte neuartige photoschaltbare Gerüst dient als Leitfaden für die Entwicklung neuartiger photoschaltbarer GPCR-Liganden basierend auf der privilegierten Struktur von Benzimidazol. Um ein anderes Werkzeug für die Untersuchung der CB2R-vermittelten Signalmechanismen zu erhalten, wurde ein zuvor beschriebener, vermeintlich dualsterischer CB2R-Ligand photoschaltbar gemacht. Hierfür wurde ein orthosterischer Agonist mit einem CB2R-selektiven PAM über ein photoschaltbares Azobenzol verknüpft. Die Verbindung 27-para zeigt in allen untersuchten Assays das bevorzugte „cis on"-Verhalten mit einer >10-fach höheren Potenz im Vergleich zu ihrem trans-Isomer. KW - Cannabinoide KW - Photoswitchable KW - Cannabinoids Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-348943 ER - TY - THES A1 - Hadi, Naji Said Aboud T1 - In vitro Studies on the Genotoxicity of Selected Pyrrolizidine Alkaloids T1 - In-vitro-Studien zur Genotoxizität ausgewählter Pyrrolizidinalkaloide N2 - Cancer is one of the leading causes of death worldwide. Toxic contaminants in human food or medicinal products, such as substances like pyrrolizidine alkaloids (PAs), have been thought to contribute to cancer incidence. PAs are found in many plant species as secondary metabolites, and they may affect humans through contaminated food sources, herbal medicines, and dietary supplements. Hundreds of compounds belonging to PAs have been identified, differing in their chemical structures, either in their necine base moiety or esterification at their necic acid moiety. PAs undergo hepatic metabolism, and after this process, they can induce hepatotoxicity, genotoxicity, and carcinogenicity. However, the mechanism of inducing genotoxicity and carcinogenicity is still unclear and warrants further investigation. Therefore, the present study aims to investigate the mechanism of genotoxicity induced by selected PAs with different chemical structures in in vitro systems. Primarily, human hepatoma HepG2 cells were utilized, and in co-culture, metabolically active HepG2 cells were combined with non-metabolically active human cervical HeLa H2B-GFP cells. First, the genotoxicity of the PAs europine, lycopsamine, retrorsine, riddelliine, seneciphylline, echimidine, and lasiocarpine was investigated in the cytokinesis-block micronucleus (CBMN) assay. All seven selected PAs caused the formation of micronuclei in a dose-dependent manner, with the maximal increase of micronucleus formation ranging from 1.64 to 2.0 fold. The lowest concentrations at which significant induction of micronuclei was found were 3.2 µM for lasiocarpine and riddelliine, 32 µM for retrorsine and echimidine, and 100 µM for seneciphylline, europine, and lycopsamine. These results confirmed previously published potency rankings in the micronucleus assay. The same PAs, with the exception of seneciphylline, were also investigated in a crosslink-modified comet assay, and reduced tail formation after hydrogen peroxide treatment was found in all diester-type PAs. Meanwhile, an equimolar concentration of the monoesters europine and lycopsamine did not significantly reduce DNA migration. Thus, the crosslinking activity was related to the ester type. Next, the role of metabolic enzymes and membrane transporters in PA-induced genotoxicity was assessed. Ketoconazole (CYP 450-3A4 inhibitor) prevented lasiocarpine-induced micronucleus formation completely, while furafylline (CYP 450-1A2 inhibitor) reduced lasiocarpine-induced micronucleus formation, but did not abolish it completely. This implies that the CYP 450 enzymes play an important role in PA-induced genotoxicity. Carboxylesterase 2 enzyme (CES 2) is commonly known to be involved in the detoxification of xenobiotics. Loperamide (CES 2 inhibitor) yielded an increased formation of lasiocarpine-induced micronuclei, revealing a possible role of CES-mediated detoxification in the genotoxicity of lasiocarpine. Also, intracellular glutathione (GSH) plays an important role in the detoxification of xenobiotics or toxins in the cells. Cells which had been pretreated with L-buthionine sulfoximine (BSO) to reduce GSH content were significantly more sensitive for the induction of micronucleus formation by lasiocarpine revealing the importance of GSH in PA-induced genotoxicity. Quinidine (Q) and nelfinavir (NFR) are OCT1 and OATP1B1 influx transporter inhibitors, respectively, which reduced micronucleus induction by lasiocarpine (only quinidine significantly), but not completely, pointing to a relevance of OCT1 for PA uptake in HepG2 cells. Verapamil (V) and benzbromarone (Bz) are MDR1 and MRP2 efflux transporter inhibitors, respectively, and they caused a slightly increased micronucleus induction by lasiocarpine (significant only for benzbromarone) thus, revealing the role of efflux transporters in PA-induced genotoxicity. The mechanistic approach to PA-induced genotoxicity was further studied based on oxidative stress via the formation of reactive oxygen species (ROS) in HepG2 cells. Overproduction of ROS can cross-link cellular macromolecules such as DNA, leading to genomic damage. An equimolar concentration of 10 µM of lasiocarpine (open-diester PA), riddelliine (cyclic-diester PA), and europine (monoester) significantly induced ROS production, with the highest ROS generation observed after lasiocarpine treatment, followed by riddelliine and then europine. No significant increase in ROS production was found with lycopsamine (10 µM; monoester PA), even at a higher concentration (320 µM). The generation of ROS by these PAs was further analyzed for confirmation by using 5 mM of the thiol radical scavenger antioxidant N-acetyl cysteine (NAC) combined with lasiocarpine, riddelliine, or europine. This analysis yielded a significant decrease in ROS after combining NAC with lasiocarpine, riddelliine, and europine. In addition, lasiocarpine, riddelliine, and europine induced a loss of mitochondrial membrane potential, pointing to mitochondria as the source of ROS generation. In vivo, hepatic sinusoidal epithelial cells (HSECs) are known to be damaged first by PAs after hepatic metabolization, but HSECs themselves do not express the required metabolic enzymes for activation of PAs. To mimic this situation, HepG2 cells were used to metabolically activate PA in a co-culture with HeLa H2B-GFP cells as non-metabolically active neighbours. Due to the green fluorescent GFP label the HeLa cells could be identified easily based in the co-culture. The PAs europine, riddelliine and lasiocarpine induced micronucleus formation in HepG2 cells, and in HeLa H2B-GFP cells co-cultured with HepG2 cells, but not in HeLa H2B-GFP cells cultured alone. Metabolic inhibition of CYP 450 enzymes with ketoconazole abrogated micronucleus formation induced by the same PAs tested in the co-culture. The efflux transporter inhibitors verapamil and benzbromarone reduced the micronucleus formation in the co-culture. Furthermore, mitotic disturbances as an additional genotoxic mechanism of action were observed in HepG2 cells and in HeLa H2B-GFP cells co-cultured with HepG2 cells, but not in HeLa H2B-GFP cells cultured alone. Overall, we were able to show that PAs were activated by HepG2 cells and the metabolites induced genomic damage in co-cultured non-metabolically active green HeLa cells. Finally, in HepG2 cells as well as the co-culture, combinations of PAs lasiocarpine and riddelliine favoured an additive effect rather than synergism. Thus, this study therefore provides support that the assumption of dose-addition can be applied in the characterization of the genotoxicity risk of PAs present in a mixture. N2 - Krebs ist eine der häufigsten Todesursachen weltweit. Toxische Verunreinigungen in Lebensmitteln oder pflanzlichen Arzneimitteln, wie Pyrrolizidinalkaloide (PAs), können zur Krebsinzidenz beitragen. PAs kommen in vielen Pflanzenarten als Sekundärmetabolite vor. Menschen können diese über kontaminierte Nahrungsquellen, pflanzliche Arzneimittel und Nahrungsergänzungsmittel aufnehmen. Eine Vielzahl von Verbindungen, die zu pyrrolizidinalkaloidhaltigen Substanzen (PAs) gehören, wurden identifiziert. Diese unterscheiden sich in ihrer chemischen Struktur entweder durch ihre Necinbaseneinheit oder ihre Veresterung an der Necicsäureeinheit. Nach metabolischer Aktivierung in der Leber können PAs Hepatotoxizität, Genotoxizität und Karzinogenität induzieren. Jedoch ist der Genotoxizitätsmechanismus nicht vollständig aufgeklärt und erfordert weitere Untersuchungen. Das Ziel dieser Studie liegt in der Untersuchung des Mechanismus der Genotoxizität, die in vitro durch bestimmte PAs mit unterschiedlicher chemischer Struktur induziert wird. Hierbei wurden primär humane Hepatom-HepG2-Zellen verwendet sowie in Co-Kultur metabolisch aktive HepG2-Zellen und nicht-metabolisch aktive humane zervikale HeLa H2B-GFP-Zellen. Zunächst wurde die Genotoxizität der PAs Europin, Lycopsamin, Retrorsin, Riddelliin, Seneciphyllin, Echimidin und Lasiocarpin im Zytokinese-Block-Mikronukleus-Assay (CBMN) untersucht. Die sieben (7) ausgewählten PAs führten dosisabhängig zur Bildung von Mikrokernen. Der maximale Anstieg der Mikronukleusbildung lag für alle PAs im Bereich des 1,64- bis 2,0-fachen des Ausgangswertes. Die niedrigsten Konzentrationen, bei denen eine signifikante Induktion von Mikrokernen gefunden wurde, waren 3,2 μM für Lasiocarpin und Riddelliin, 32 μM für Retrorsin und Echimidin sowie 100 μM für Seneciphyllin, Europin und Lycopsamin. Diese Ergebnisse bestätigen zuvor veröffentlichte Potenz-Rankings im Mikronukleus-Assay. Die Genotoxizität der gleichen PAs, mit Ausnahme von Seneciphyllin, wurde zusätzlich mittels eines Crosslink-modifizierten Comet-Assay untersucht. Es wurde eine reduzierte Schweifbildung nach der Behandlung mit Wasserstoffperoxid in allen PAs des Diestertyps gefunden, während eine äquimolare Konzentration der Monoester Europin und Lycopsamin die DNA-Migration nicht signifikant reduzierte. Dies deutet darauf hin, dass die Vernetzungsaktivität von PAs auf der Ester-Einheit beruht. Als nächstes wurde die Rolle von Stoffwechselenzymen und Membrantransportern in der PA-induzierten Genotoxizität untersucht. Ketoconazol (CYP 450-3A4-Inhibitor) verhinderte die Lasiocarpin-induzierte Mikronukleusbildung vollständig, während Furafyllin (CYP 450-1A2-Inhibitor) die Lasiocarpin-induzierte Mikronukleusbildung reduzierte, aber nicht vollständig beseitigte. Dies deutet darauf hin, dass CYP 450-Enzyme eine wichtige Rolle bei der PA-induzierten Genotoxizität spielen. Es ist allgemein bekannt, dass das Enzym Carboxylesterase 2 (CES-2) an der Entgiftung von Xenobiotika beteiligt ist. Loperamid (CES-2-Inhibitor) führte zu einer erhöhten Bildung von Lasiocarpin-induzierten Mikrokernen, was auf eine mögliche Rolle der CES-vermittelten Entgiftung bei der Genotoxizität von Lasiocarpin hindeutet. Auch intrazelluläres Glutathion (GSH) spielt eine wichtige Rolle bei der Entgiftung von Xenobiotika oder Toxinen. Zellen, die mit L-Buthioninsulfoximin (BSO) vorbehandelt worden waren, um den GSH-Gehalt zu reduzieren, waren signifikant empfindlicher für die Induktion der Mikronukleusbildung durch Lasiocarpin, was die Bedeutung von GSH für die PA-induzierte Genotoxizität zeigt. Chinidin (Q) und Nelfinavir (NFR) sind OCT1- bzw. OATP1B1-Influx-Transporter-Inhibitoren, die die Mikronukleus-Induktion durch Lasiocarpin reduzierten (nur Chinidin signifikant), aber nicht vollständig, was auf eine Relevanz von OCT1 für die PA-Aufnahme in HepG2-Zellen hindeutet.Verapamil (V) und Benzbromaron (Bz) sind MDR1- bzw. MRP2-Efflux-Transporter-Inhibitoren und verursachten eine leicht erhöhte Mikronukleus-Induktion durch Lasiocarpin (signifikant nur für Benzbromaron), was die Rolle von Efflux-Transportern bei der PA-induzierten Genotoxizität aufzeigt. Der Mechanismus der PA-induzierten Genotoxizität wurde auf der Grundlage von oxidativem Stress durch die Bildung von reaktiven Sauerstoffspezies (ROS) in HepG2-Zellen weiter untersucht. Eine Überproduktion von ROS kann zelluläre Makromoleküle wie DNA vernetzen, was zu genomischen Schäden führt. Eine äquimolare Konzentration von 10 μM von Lasiocarpin (Open-Diester PA), Riddelliin (Cyclic-Diester PA) und Europin (Monoester) induzierte signifikant die ROS-Produktion, wobei die höchste ROS-Erzeugung nach Lasiocarpin-Behandlung beobachtet wurde, gefolgt von Riddelliin und Europin. Mit Lycopsamin (10 μM; Monoester PA) wurde auch bei höherer Konzentration (320 μM) keine signifikante Steigerung der ROS-Produktion gefunden. Um die Beteiligung von ROS am Mechanismus der Genotoxizität einzelner PAs genauer zu betrachten und die bisherigen Ergebnisse zu bestätigen, wurden weitere Untersuchungen in Anwesenheit des Sauerstoffradikalfängers N-Acetylcysteine (NAC) in Kombination mit Lasiocarpin, Riddelliin oder Europin durchgeführt. Diese Analyse ergab eine signifikante Abnahme der ROS-Produktion nach der Kombination von NAC mit Lasiocarpin, Riddelliin und Europin. Darüber hinaus induzierten Lasiocarpin, Riddelliin und Europin Veränderungen im mitochondrialen Membranpotenzial. Dies deutet darauf hin, dass ROS vermehrt in den Mitochondrien der Zellen gebildet werden. Aus in vivo Daten ist bekannt, dass hepatische sinusoidale Epithelzellen (HSECs) die Zelltypen innerhalb der Leber sind, die nach der metabolischen Aktivierung von PAs zuerst geschädigt werden. Jedoch exprimieren HSECs nicht die erforderlichen Stoffwechselenzyme für die Aktivierung von PAs. Um diese Situation nachzuahmen, wurden HepG2-Zellen verwendet, um PAs in einer Kokultur mit HeLa H2B-GFP-Zellen als nicht-metabolisch aktive Nachbarn metabolisch zu aktivieren. Durch die grün fluoreszierende GFP-Markierung konnten die HeLa-Zellen in der Co-Kultur leicht identifiziert werden. Die PAs Europine, Riddelliin und Lasiocarpin induzierten die Bildung von Mikrokernen in HepG2-Zellen und in HeLa H2B-GFP-Zellen, die mit HepG2-Zellen kokultiviert wurden, jedoch nicht in HeLa H2B-GFP-Zellen, die allein kultiviert wurden. Die metabolische Hemmung von CYP 450-Enzymen mit Ketoconazol hob die Mikronukleusbildung, welche durch die zuvor getesteten PAs induziert wurde, auf. Die Efflux-Transporter-Inhibitoren Verapamil und Benzbromaron reduzierten die Mikronukleusbildung in der Kokultur. Darüber hinaus wurden mitotische Störungen als zusätzlicher genotoxischer Wirkmechanismus in der Co-Kultur aus HepG2-Zellen und in HeLa H2B-GFP-Zellen beobachtet, jedoch nicht in HeLa H2B-GFP-Zellen, die allein kultiviert wurden. Zusammengefasst deuten diese Ergebnisse darauf hin, dass PAs durch HepG2-Zellen bioaktiviert werden können und aus PAs gebildete Metabolite genomische Schäden in kokultivierten, nicht-metabolisch aktiven HeLa-Zellen induzierten. Abschließend zeigen Kombinationen der PAs Lasiocarpin und Riddelliin sowohl in HepG2-Zellen als auch in der Co-Kultur eher einen additiven Effekt als einen Synergismus. Diese Studie liefert daher Unterstützung für die Annahme, dass die Dosisaddition zur Charakterisierung des genotoxischen Risikos von in einem Gemisch vorhandenen PAs angewendet werden kann. KW - Pyrrolizidine alkaloids KW - HeLa H2B-GFP-Zellen KW - Pyrrolizidinalkaloide KW - Kleinkern KW - Mutagenität KW - Genotoxizität KW - DNA-Vernetzung KW - mitotische Störung KW - Co-culture KW - metabolische Aktivierung KW - Membrantransporter KW - metabolische Enzyme KW - HepG2-Zellen KW - Genotoxicity KW - Micronuclei KW - DNA crosslink KW - Mitotic disturbance KW - Metabolic activation KW - Membrane transporters KW - Metabolic enzymes KW - HepG2 cells KW - HeLa H2B-GFP cells KW - micronucleus Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370376 ER - TY - THES A1 - Kawan, Mona T1 - The membrane trafficking protein myoferlin is a novel interactor of p97 T1 - Das Membrantransportprotein Myoferlin ist ein neuer Interaktor von p97 N2 - p97 uses the energy of ATP hydrolysis to unfold and thereby segregate proteins. It is involved in various cellular processes such as proteasomal degradation, DNA damage repair, autophagy, and endo-lysosomal trafficking. The specificity for these processes is controlled by more than 30 regulatory cofactors. Interactions of p97 with cofactors and target proteins are known to be highly dynamic and transient. To identify new interaction partners and to uncover novel cellular functions of p97, the interactome of endogenous p97 was determined by using in cellulo crosslinking followed by immunoprecipitation and mass spectrometry. Myoferlin (MYOF) was identified as a novel interactor of p97 and the interaction was validated in reciprocal immunoprecipitation experiments for different cell lines. The ferlin family member MYOF is a tail-anchored membrane protein containing multiple C2 domains. MYOF is involved in various membrane repair and trafficking processes such as the endocytic recycling of cell surface receptors. The MYOF interactome was determined by mass spectrometry. Among others, the p97 cofactor PLAA, CD71 and Rab14 were identified as common interactors of p97 and MYOF. Immunoprecipitation experiments with PLAA KO cells revealed that the interaction between MYOF and p97 depends on PLAA. Immunofluorescence microscopy showed a co-localization of MYOF with Rab14 and Rab11, which are both involved in endocytic recycling pathways. Furthermore, immunofluoroscence experiments revealed that MYOF and the p97 cofactor PLAA are localized to Rab14- and Rab5-positive endosomal compartments. Using p97 inhibitors and p97 trapping mutants, the presence of p97 at MYOF-positive and Rab14-positive structures could be demonstrated. Consistent with this finding, the endocytic recycling of transferrin was delayed upon inhibition of p97. Taken together, this work identified MYOF as a novel interactor of p97 and suggests a role for p97 in the recycling of endocytic cargo. N2 - p97 nutzt die aus der ATP-Hydrolyse gewonnene Energie, um Proteine zu entfalten und dadurch zu trennen. Es ist an verschiedenen zellulären Prozessen wie dem proteasomalen Abbau, der Reparatur von DNA-Schäden, der Autophagie und dem endo-lysosomalen Transport beteiligt. Die Spezifität für diese Prozesse wird durch mehr als 30 regulatorische Cofaktoren gesteuert. Wechselwirkungen von p97 mit Cofaktoren und Zielproteinen sind bekanntermaßen hochdynamisch und treten oft nur vorübergehend auf. Um neue Interaktionspartner zu identifizieren und neue zelluläre Funktionen von p97 aufzudecken, wurde das Interaktom von endogenem p97 unter Verwendung von in cellulo crosslinking, gefolgt von IP und Massenspektrometrie bestimmt. Dabei wurde MYOF als neuartiger Interaktor von p97 entdeckt und diese Interaktion wurde in reziproken IP-Experimenten und für verschiedene Zelllinien bestätigt. MYOF gehört der Ferlin Familie an und besitzt mehrere C2-Domänen sowie eine Trans-membrandomäne. MYOF ist bekanntermaßen an verschiedenen Membranreparatur- und Transportvorgängen wie beispielsweise dem endozytischen Recycling von Zelloberflächenrezeptoren beteiligt. Das Interaktom von MYOF wurde durch Massenspektrometrie bestimmt. Dabei wurden unter anderem der p97 Cofaktor PLAA, CD71 und Rab14 als gemeinsame Interaktoren von p97 und MYOF identifiziert. Durch IP-Experimente mit PLAA KO Zellen wurde eine Abhängigkeit der Interaktion zwischen MYOF und p97 von PLAA nachgewiesen. Mit IF-Mikroskopie konnte eine Kolokalisation von MYOF mit Rab14 und Rab11, die beide an endosomalen Recycling-Wegen beteiligt sind, beobachtet werden. Des Weiteren zeigten IF-Experimente, dass MYOF und der p97-Cofaktor PLAA an Rab14- und Rab5-positiven endosomalen Kompartimenten lokalisiert sind. Durch die Verwendung von p97-Inhibitoren oder p97 Mutanten, die ATP nicht hydrolysieren können und so verstärkt Substrate anreichern, konnte gezeigt werden, dass p97 an MYOF-positiven und Rab14-positiven Strukturen nachgewiesen werden kann. In Übereinstimmung mit diesem Befund wurde das endozytische Recycling von Transferrin durch die Inhibierung von p97 verzögert. Zusammengefasst zeigt diese Arbeit, dass MYOF ein neuer Interaktor von p97 ist, und deutet auf eine Rolle von p97 beim Recycling von endozytischer Fracht hin. KW - Endosom KW - p97 KW - Myoferlin Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-281218 ER - TY - JOUR T1 - Search for new phenomena in events with same-charge leptons and b-jets in pp collisions at √\(s\) = 13 TeV with the ATLAS detector JF - Journal of High Energy Physics N2 - A search for new phenomena in events with two same- charge leptons or three leptons and jets identi fi ed as originating from b - quarks in a data sample of 36.1 fb of pp collisions at ps = 13TeV recorded by the ATLAS detector at the Large Hadron Collider is reported. No signi fi cant excess is found and limits are set on vector- like quark, fourtop- quark, and same- sign top- quark pair production. The observed ( expected) 95% CL mass limits for a vector- like T - and B - quark singlet are mT > 0 : 98 ( 0 : 99) TeV and mB > 1 : 00 ( 1 : 01) TeV respectively. Limits on the production of the vector- like T5=3 - quark are also derived considering both pair and single production; in the former case the lower limit on the mass of the T5=3 - quark is ( expected to be) 1.19 ( 1.21) TeV. The Standard Model fourtop- quark production cross- section upper limit is ( expected to be) 69 ( 29) fb. Constraints are also set on exotic four- top- quark production models. Finally, limits are set on samesign top- quark pair production. The upper limit on uu ! tt production is ( expected to be) 89 ( 59) fb for a mediator mass of 1TeV, and a dark- matter interpretation is also derived, excluding a mediator of 3TeV with a dark- sector coupling of 1.0 and a coupling to ordinary matter above 0.31. KW - Hadron-Hadron scattering (experiments) KW - SUSHI Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-312681 VL - 12 IS - 39 ER - TY - JOUR A1 - Weiss, Esther A1 - Ziegler, Sabrina A1 - Fliesser, Mirjam A1 - Schmitt, Anna-Lena A1 - Hünniger, Kerstin A1 - Kurzai, Oliver A1 - Morton, Charles-Oliver A1 - Einsele, Hermann A1 - Loeffler, Juergen T1 - First Insights in NK—DC Cross-Talk and the Importance of Soluble Factors During Infection With Aspergillus fumigatus JF - Frontiers in Cellular and Infection Microbiology N2 - Invasive aspergillosis (IA) is an infectious disease caused by the fungal pathogen Aspergillus fumigatus that mainly affects immunocompromised hosts. To investigate immune cell cross-talk during infection with A. fumigatus, we co-cultured natural killer (NK) cells and dendritic cells (DC) after stimulation with whole fungal structures, components of the fungal cell wall, fungal lysate or ligands for distinct fungal receptors. Both cell types showed activation after stimulation with fungal components and were able to transfer activation signals to the counterpart not stimulated cell type. Interestingly, DCs recognized a broader spectrum of fungal components and thereby initiated NK cell activation when those did not recognize fungal structures. These experiments highlighted the supportive function of DCs in NK cell activation. Furthermore, we focused on soluble DC mediated NK cell activation and showed that DCs stimulated with the TLR2/Dectin-1 ligand zymosan could maximally stimulate the expression of CD69 on NK cells. Thus, we investigated the influence of both receptors for zymosan, Dectin-1 and TLR2, which are highly expressed on DCs but show only minimal expression on NK cells. Specific focus was laid on the question whether Dectin-1 or TLR2 signaling in DCs is important for the secretion of soluble factors leading to NK cell activation. Our results show that Dectin-1 and TLR2 are negligible for NK cell activation. We conclude that besides Dectin-1 and TLR2 other receptors on DCs are able to compensate for the missing signal. KW - natural killer cells KW - dendritic cells KW - NK-DC cross-talk KW - Aspergillus fumigatus KW - soluble factors KW - innate immunity Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233565 VL - 8 ER - TY - JOUR A1 - Vural, Atay A1 - Doppler, Kathrin A1 - Meinl, Edgar T1 - Autoantibodies Against the Node of Ranvier in Seropositive Chronic Inflammatory Demyelinating Polyneuropathy: Diagnostic, Pathogenic, and Therapeutic Relevance JF - Frontiers in Immunology N2 - Discovery of disease-associated autoantibodies has transformed the clinical management of a variety of neurological disorders. Detection of autoantibodies aids diagnosis and allows patient stratification resulting in treatment optimization. In the last years, a set of autoantibodies against proteins located at the node of Ranvier has been identified in patients with chronic inflammatory demyelinating polyneuropathy (CIDP). These antibodies target neurofascin, contactin1, or contactin-associated protein 1, and we propose to name CIDP patients with these antibodies collectively as seropositive. They have unique clinical characteristics that differ from seronegative CIDP. Moreover, there is compelling evidence that autoantibodies are relevant for the pathogenesis. In this article, we review the current knowledge on the characteristics of autoantibodies against the node of Ranvier proteins and their clinical relevance in CIDP. We start with a description of the structure of the node of Ranvier followed by a summary of assays used to identify seropositive patients; and then, we describe clinical features and characteristics linked to seropositivity. We review knowledge on the role of these autoantibodies for the pathogenesis with relevance for the emerging concept of nodopathy/paranodopathy and summarize the treatment implications. KW - autoantibody KW - seropositive KW - chronic inflammatory demyelinating polyneuropathy KW - node of Ranvier KW - paranode KW - neurofascin KW - contactin KW - contactin-associated protein 1 Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233279 VL - 9 ER - TY - JOUR A1 - Vaahtoranta, Enni A1 - Lenhart, Jan A1 - Suggate, Sebastian A1 - Lenhard, Wolfgang T1 - Interactive Elaborative Storytelling: Engaging Children as Storytellers to Foster Vocabulary JF - Frontiers in Psychology N2 - Positive effects of shared reading for children’s language development are boosted by including instruction of word meanings and by increasing interactivity. The effects of engaging children as storytellers on vocabulary development have been less well studied. We developed an approach termed Interactive Elaborative Storytelling (IES), which employs both word-learning techniques and children’s storytelling in a shared-reading setting. To systematically investigate potential benefits of children as storytellers, we contrasted this approach to two experimental groups, an Elaborative Storytelling group employing word-learning techniques but no storytelling by children and a Read-Aloud group, excluding any additional techniques. The study was a 3 × 2 pre-posttest randomized design with 126 preschoolers spanning 1 week. Measured outcomes were receptive and expressive target vocabulary, story memory, and children’s behavior during story sessions. All three experimental groups made comparable gains on target words from pre- to posttest and there was no difference between groups in story memory. However, in the Elaborative Storytelling group, children were the least restless. Findings are discussed in terms of their contribution to optimizing shared reading as a method of fostering language. KW - storytelling KW - shared reading KW - language intervention KW - preschool KW - language development Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-232136 VL - 10 ER - TY - JOUR A1 - Treff, Gunnar A1 - Winkert, Kay A1 - Sareban, Mahdi A1 - Steinacker, Jürgen M. A1 - Sperlich, Billy T1 - The Polarization-Index: A Simple Calculation to Distinguish Polarized From Non-polarized Training Intensity Distributions JF - Frontiers in Physiology N2 - The training intensity distribution (TID) of endurance athletes has retrieved substantial scientific interest since it reflects a vital component of training prescription: (i) the intensity of exercise and its distribution over time are essential components for adaptation to endurance training and (ii) the training volume (at least for most endurance disciplines) is already near or at maximum, so optimization of training procedures including TID have become paramount for success. This paper aims to elaborate the polarization-index (PI) which is calculated as log10(Zone 1/Zone 2∗Zone 3∗100), where Zones 1–3 refer to aggregated volume (time or distance) spent with low, mid, or high intensity training. PI allows to distinguish between non-polarized and polarized TID using a cut-off > 2.00 a.U. and to quantify the level of a polarized TID. Within this hypothesis paper, examples from the literature illustrating the usefulness of PI-calculation are discussed as well as its limitations. Further it is elucidated how the PI may contribute to a more precise definition of TID descriptors. KW - high-intensity training KW - high-performance sports KW - lactate threshold training KW - endurance training KW - elite Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-229040 VL - 10 ER - TY - JOUR A1 - Too, Chin Chin A1 - Keller, Alexander A1 - Sickel, Wiebke A1 - Lee, Sui Mae A1 - Yule, Catherine M. T1 - Microbial Community Structure in a Malaysian Tropical Peat Swamp Forest: The Influence of Tree Species and Depth JF - Frontiers in Microbiology N2 - Tropical peat swamp forests sequester globally significant stores of carbon in deep layers of waterlogged, anoxic, acidic and nutrient-depleted peat. The roles of microbes in supporting these forests through the formation of peat, carbon sequestration and nutrient cycling are virtually unknown. This study investigated physicochemical peat properties and microbial diversity between three dominant tree species: Shorea uliginosa (Dipterocarpaceae), Koompassia malaccensis (legumes associated with nitrogen-fixing bacteria), Eleiodoxa conferta (palm) and depths (surface, 45 and 90 cm) using microbial 16S rRNA gene amplicon sequencing. Water pH, oxygen, nitrogen, phosphorus, total phenolic contents and C/N ratio differed significantly between depths, but not tree species. Depth also strongly influenced microbial diversity and composition, while both depth and tree species exhibited significant impact on the archaeal communities. Microbial diversity was highest at the surface, where fresh leaf litter accumulates, and nutrient supply is guaranteed. Nitrogen was the core parameter correlating to microbial communities, but the interactive effects from various environmental variables displayed significant correlation to relative abundance of major microbial groups. Proteobacteria was the dominant phylum and the most abundant genus, Rhodoplanes, might be involved in nitrogen fixation. The most abundant methanogens and methanotrophs affiliated, respectively, to families Methanomassiliicoccaceae and Methylocystaceae. Our results demonstrated diverse microbial communities and provide valuable insights on microbial ecology in these extreme ecosystems. KW - tropical peat swamp forest KW - metabarcoding KW - microbial diversity and composition KW - tree species KW - depth KW - methanogens Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-229000 VL - 9 ER - TY - JOUR A1 - Ticha, Olga A1 - Moos, Lukas A1 - Wajant, Harald A1 - Bekeredjian-Ding, Isabelle T1 - Expression of Tumor Necrosis Factor Receptor 2 Characterizes TLR9-Driven Formation of Interleukin-10-Producing B Cells JF - Frontiers in Immunology N2 - B cell-derived interleukin-10 (IL-10) production has been described as a hallmark for regulatory function in B lymphocytes. However, there is an ongoing debate on the origin of IL-10-secreting B cells and lack of specific surface markers has turned into an important obstacle for studying human B regulatory cells. In this study, we propose that tumor necrosis factor receptor 2 (TNFR2) expression can be used for enrichment of IL-10-secreting B cells. Our data confirm that IL-10 production can be induced by TLR9 stimulation with CpG ODN and that IL-10 secretion accompanies differentiation of peripheral blood B cells into plasma blasts. We further show that CpG ODN stimulation induces TNFR2 expression, which correlates with IL-10 secretion and terminal differentiation. Indeed, flow cytometric sorting of TNFR2+ B cells revealed that TNFR2+ and TNFR2− fractions correspond to IL-10+ and IL-10− fractions, respectively. Furthermore, CpG-induced TNFR2+ B cells were predominantly found in the IgM+ CD27+ B cell subset and spontaneously released immunoglobulin. Finally, our data corroborate the functional impact of TNFR2 by demonstrating that stimulation with a TNFR2 agonist significantly augments IL-10 and IL-6 production in B cells. Altogether, our data highlight a new role for TNFR2 in IL-10-secreting human B lymphocytes along with the potential to exploit this finding for sorting and isolation of this currently ill-defined B cell subset. KW - human KW - B cells KW - interleukin-10 KW - tumor necrosis factor receptor 2 KW - TLR 9 KW - Breg Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-241323 VL - 8 ER - TY - JOUR A1 - Siebert, Claudia A1 - Ciato, Denis A1 - Murakami, Masanori A1 - Frei-Stuber, Ludwig A1 - Perez-Rivas, Luis Gustavo A1 - Monteserin-Garcia, José Luis A1 - Nölting, Svenja A1 - Maurer, Julian A1 - Feuchtinger, Annette A1 - Walch, Axel K. A1 - Haak, Harm R. A1 - Bertherat, Jérôme A1 - Mannelli, Massimo A1 - Fassnacht, Martin A1 - Korpershoek, Esther A1 - Reincke, Martin A1 - Stalla, Günter K. A1 - Hantel, Constanze A1 - Beuschlein, Felix T1 - Heat Shock Protein 90 as a Prognostic Marker and Therapeutic Target for Adrenocortical Carcinoma JF - Frontiers in Endocrinology N2 - Background: Adrenocortical carcinoma (ACC) is a rare tumor entity with restricted therapeutic opportunities. HSP90 (Heat Shock Protein 90) chaperone activity is fundamental for cell survival and contributes to different oncogenic signaling pathways. Indeed, agents targeting HSP90 function have shown therapeutic efficacy in several cancer types. We have examined the expression of HSP90 in different adrenal tumors and evaluated the use of HSP90 inhibitors in vitro as possible therapy for ACC. Methods: Immunohistochemical expression of HSP90 isoforms was investigated in different adrenocortical tumors and associated with clinical features. Additionally, a panel of N-terminal (17-allylamino-17-demethoxygeldanamycin (17-AAG), luminespib, and ganetespib) and C-terminal (novobiocin and silibinin) HSP90 inhibitors were tested on various ACC cell lines. Results: Within adrenocortical tumors, ACC samples exhibited the highest expression of HSP90β. Within a cohort of ACC patients, HSP90β expression levels were inversely correlated with recurrence-free and overall survival. In functional assays, among five different compounds tested luminespib and ganetespib induced a significant decrease in cell viability in single as well as in combined treatments with compounds of the clinically used EDP-M scheme (etoposide, doxorubicin, cisplatin, mitotane). Inhibition of cell viability correlated furthermore with a decrease in proliferation, in cell migration and an increase in apoptosis. Moreover, analysis of cancer pathways indicated a modulation of the ERK1/2—and AKT—pathways by luminespib and ganetespib treatment. Conclusions: Our findings emphasize HSP90 as a marker with prognostic impact and promising target with N-terminal HSP90 inhibitors as drugs with potential therapeutic efficacy toward ACC. KW - adrenal gland KW - cortisol KW - N-terminal HSP90 inhibitors KW - C-terminal HSP90 inhibitors KW - prognostic marker Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-238029 VL - 10 ER - TY - JOUR A1 - Schurig, Johannes A1 - Haeusler, Karl Georg A1 - Grittner, Ulrike A1 - Nolte, Christian H. A1 - Fiebach, Jochen B. A1 - Audebert, Heinrich J. A1 - Endres, Matthias A1 - Rocco, Andrea T1 - Frequency of Hemorrhage on Follow Up Imaging in Stroke Patients Treated With rt-PA Depending on Clinical Course JF - Frontiers in Neurology N2 - Background: According to current guidelines, stroke patients treated with rt-PA should undergo brain imaging to exclude intracerebral bleeding 24 h after thrombolysis, before the start of medical secondary prevention. However, the usefulness of routine follow-up imaging with regard to changes in therapeutic management in patients without neurological deterioration is unclear. We hypothesized that follow up brain imaging solely to exclude bleeding in patients who clinically improved after rt-PA application may not be necessary. Methods: Retrospective single-center analysis including stroke patients treated with rt-PA. Records were reviewed for hemorrhagic transformation one day after systemic thrombolysis and brain imaging-based changes in therapeutic management. Twenty-four hour after thrombolysis patients were divided into four groups: (1) increased NIHSS score; (2) unchanged NIHSS score; (3) improved NIHSS score and; (4) NIHSS score = 0. Results: Out of 188 patients (mean age 73 years, 100 female) receiving rt-PA, 32 (17%) had imaging-proven hemorrhagic transformation including 11 (6%) patients with parenchymal hemorrhage. Patients in group (1, 2) more often had hypertension (p = 0.015) and more often had parenchymal hemorrhage (9 vs. 4%; p < 0.206) compared to group (3, 4) and imaging-based changes in therapeutic management were more frequent (19% vs. 6%; p = 0.007). Patients of group (3, 4) had no changes in therapeutic management in 94% of the cases. Patients in group (4) had no hemorrhagic transformation in routine follow-up brain imaging. Conclusions: Frequency of hemorrhagic transformation in Routine follow-up brain imaging and consecutive changes in therapeutic management were different depending on clinical course measured by NHISS score. KW - thrombolysis KW - stroke KW - stroke management KW - magnetic resonance imaging KW - computerized tomography KW - intracerebral hemorrhage Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-234947 VL - 10 ER - TY - JOUR A1 - Schroeter, Matthias L. A1 - Pawelke, Sarah A1 - Bisenius, Sandrine A1 - Kynast, Jana A1 - Schuemberg, Katharina A1 - Polyakova, Maryna A1 - Anderl-Straub, Sarah A1 - Danek, Adrian A1 - Fassbender, Klaus A1 - Jahn, Holger A1 - Jessen, Frank A1 - Kornhuber, Johannes A1 - Lauer, Martin A1 - Prudlo, Johannes A1 - Schneider, Anja A1 - Uttner, Ingo A1 - Thöne-Otto, Angelika A1 - Otto, Markus A1 - Diehl-Schmid, Janine T1 - A Modified Reading the Mind in the Eyes Test Predicts Behavioral Variant Frontotemporal Dementia Better Than Executive Function Tests JF - Frontiers in Aging Neuroscience N2 - Behavioral variant frontotemporal dementia (bvFTD) is characterized by deep alterations in behavior and personality. Although revised diagnostic criteria agree for executive dysfunction as most characteristic, impairments in social cognition are also suggested. The study aimed at identifying those neuropsychological and behavioral parameters best discriminating between bvFTD and healthy controls. Eighty six patients were diagnosed with possible or probable bvFTD according to Rascovsky et al. (2011) and compared with 43 healthy age-matched controls. Neuropsychological performance was assessed with a modified Reading the Mind in the Eyes Test (RMET), Stroop task, Trail Making Test (TMT), Hamasch-Five-Point Test (H5PT), and semantic and phonemic verbal fluency tasks. Behavior was assessed with the Apathy Evaluation Scale, Frontal Systems Behavioral Scale, and Bayer Activities of Daily Living Scale. Each test’s discriminatory power was investigated by Receiver Operating Characteristic curves calculating the area under the curve (AUC). bvFTD patients performed significantly worse than healthy controls in all neuropsychological tests. Discriminatory power (AUC) was highest in behavioral questionnaires, high in verbal fluency tasks and the RMET, and lower in executive function tests such as the Stroop task, TMT and H5PT. As fluency tasks depend on several cognitive functions, not only executive functions, results suggest that the RMET discriminated better between bvFTD and control subjects than other executive tests. Social cognition should be incorporated into diagnostic criteria for bvFTD in the future, such as in the International Classification of Diseases (ICD)-11, as already suggested in the Diagnostic and Statistical Manual for Mental Disorders (DSM)-5. KW - behavioral variant frontotemporal dementia KW - diagnostic criteria KW - executive function KW - social cognition KW - theory of mind Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-234254 VL - 10 ER - TY - JOUR A1 - Schneider, Christoph A1 - Wiewelhove, Thimo A1 - Raeder, Christian A1 - Flatt, Andrew A. A1 - Hoos, Olaf A1 - Hottenrott, Laura A1 - Schumbera, Oliver A1 - Kellmann, Michael A1 - Meyer, Tim A1 - Pfeiffer, Mark A1 - Ferrauti, Alexander T1 - Heart Rate Variability Monitoring During Strength and High-Intensity Interval Training Overload Microcycles JF - Frontiers in Physiology N2 - Objective: In two independent study arms, we determine the effects of strength training (ST) and high-intensity interval training (HIIT) overload on cardiac autonomic modulation by measuring heart rate (HR) and vagal heart rate variability (HRV). Methods: In the study, 37 well-trained athletes (ST: 7 female, 12 male; HIIT: 9 female, 9 male) were subjected to orthostatic tests (HR and HRV recordings) each day during a 4-day baseline period, a 6-day overload microcycle, and a 4-day recovery period. Discipline-specific performance was assessed before and 1 and 4 days after training. Results: Following ST overload, supine HR, and vagal HRV (Ln RMSSD) were clearly increased and decreased (small effects), respectively, and the standing recordings remained unchanged. In contrast, HIIT overload resulted in decreased HR and increased Ln RMSSD in the standing position (small effects), whereas supine recordings remained unaltered. During the recovery period, these responses were reversed (ST: small effects, HIIT: trivial to small effects). The correlations between changes in HR, vagal HRV measures, and performance were weak or inconsistent. At the group and individual levels, moderate to strong negative correlations were found between HR and Ln RMSSD when analyzing changes between testing days (ST: supine and standing position, HIIT: standing position) and individual time series, respectively. Use of rolling 2–4-day averages enabled more precise estimation of mean changes with smaller confidence intervals compared to single-day values of HR or Ln RMSSD. However, the use of averaged values displayed unclear effects for evaluating associations between HR, vagal HRV measures, and performance changes, and have the potential to be detrimental for classification of individual short-term responses. Conclusion: Measures of HR and Ln RMSSD during an orthostatic test could reveal different autonomic responses following ST or HIIT which may not be discovered by supine or standing measures alone. However, these autonomic changes were not consistently related to short-term changes in performance and the use of rolling averages may alter these relationships differently on group and individual level. KW - orthostatic test KW - cardiac autonomic nervous system KW - fatigue KW - recovery KW - individual response KW - multivariate analysis KW - resistance training KW - overreaching Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-231515 VL - 10 ER - TY - JOUR A1 - Prusty, Bhupesh K. A1 - Gulve, Nitish A1 - Govind, Sheila A1 - Krueger, Gerhard R. F. A1 - Feichtinger, Julia A1 - Larcombe, Lee A1 - Aspinall, Richard A1 - Ablashi, Dharam V. A1 - Toro, Carla T. T1 - Active HHV-6 Infection of Cerebellar Purkinje Cells in Mood Disorders JF - Frontiers in Microbiology N2 - Early-life infections and associated neuroinflammation is incriminated in the pathogenesis of various mood disorders. Infection with human roseoloviruses, HHV-6A and HHV-6B, allows viral latency in the central nervous system and other tissues, which can later be activated causing cognitive and behavioral disturbances. Hence, this study was designed to evaluate possible association of HHV-6A and HHV-6B activation with three different groups of psychiatric patients. DNA qPCR, immunofluorescence and FISH studies were carried out in post-mortem posterior cerebellum from 50 cases each of bipolar disorder (BPD), schizophrenia, 15 major depressive disorder (MDD) and 50 appropriate control samples obtained from two well-known brain collections (Stanley Medical Research Institute). HHV-6A and HHV-6B late proteins (indicating active infection) and viral DNA were detected more frequently (p < 0.001 for each virus) in human cerebellum in MDD and BPD relative to controls. These roseolovirus proteins and DNA were found less frequently in schizophrenia cases. Active HHV-6A and HHV-6B infection in cerebellar Purkinje cells were detected frequently in BPD and MDD cases. Furthermore, we found a significant association of HHV-6A infection with reduced Purkinje cell size, suggesting virus-mediated abnormal Purkinje cell function in these disorders. Finally, gene expression analysis of cerebellar tissue revealed changes in pathways reflecting an inflammatory response possibly to HHV-6A infection. Our results provide molecular evidence to support a role for active HHV-6A and HHV-6B infection in BPD and MDD. KW - HHV-6 KW - bipolar disorder KW - schizophrenia KW - major depressive disorder KW - Purkinje cells Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369222 VL - 9 ER - TY - JOUR A1 - Nagy, Magdolna A1 - van Geffen, Johanna P. A1 - Stegner, David A1 - Adams, David J. A1 - Braun, Attila A1 - de Witt, Susanne M. A1 - Elvers, Margitta A1 - Geer, Mitchell J. A1 - Kuijpers, Marijke J. E. A1 - Kunzelmann, Karl A1 - Mori, Jun A1 - Oury, Cécile A1 - Pircher, Joachim A1 - Pleines, Irina A1 - Poole, Alastair W. A1 - Senis, Yotis A. A1 - Verdoold, Remco A1 - Weber, Christian A1 - Nieswandt, Bernhard A1 - Heemskerk, Johan W. M. A1 - Baaten, Constance C. F. M. J. T1 - Comparative Analysis of Microfluidics Thrombus Formation in Multiple Genetically Modified Mice: Link to Thrombosis and Hemostasis JF - Frontiers in Cardiovascular Medicine N2 - Genetically modified mice are indispensable for establishing the roles of platelets in arterial thrombosis and hemostasis. Microfluidics assays using anticoagulated whole blood are commonly used as integrative proxy tests for platelet function in mice. In the present study, we quantified the changes in collagen-dependent thrombus formation for 38 different strains of (genetically) modified mice, all measured with the same microfluidics chamber. The mice included were deficient in platelet receptors, protein kinases or phosphatases, small GTPases or other signaling or scaffold proteins. By standardized re-analysis of high-resolution microscopic images, detailed information was obtained on altered platelet adhesion, aggregation and/or activation. For a subset of 11 mouse strains, these platelet functions were further evaluated in rhodocytin- and laminin-dependent thrombus formation, thus allowing a comparison of glycoprotein VI (GPVI), C-type lectin-like receptor 2 (CLEC2) and integrin α6β1 pathways. High homogeneity was found between wild-type mice datasets concerning adhesion and aggregation parameters. Quantitative comparison for the 38 modified mouse strains resulted in a matrix visualizing the impact of the respective (genetic) deficiency on thrombus formation with detailed insight into the type and extent of altered thrombus signatures. Network analysis revealed strong clusters of genes involved in GPVI signaling and Ca2+ homeostasis. The majority of mice demonstrating an antithrombotic phenotype in vivo displayed with a larger or smaller reduction in multi-parameter analysis of collagen-dependent thrombus formation in vitro. Remarkably, in only approximately half of the mouse strains that displayed reduced arterial thrombosis in vivo, this was accompanied by impaired hemostasis. This was also reflected by comparing in vitro thrombus formation (by microfluidics) with alterations in in vivo bleeding time. In conclusion, the presently developed multi-parameter analysis of thrombus formation using microfluidics can be used to: (i) determine the severity of platelet abnormalities; (ii) distinguish between altered platelet adhesion, aggregation and activation; and (iii) elucidate both collagen and non-collagen dependent alterations of thrombus formation. This approach may thereby aid in the better understanding and better assessment of genetic variation that affect in vivo arterial thrombosis and hemostasis. KW - arterial thrombus formation KW - bleeding KW - collagen KW - glycoprotein VI KW - platelets KW - microfluidics Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-232194 VL - 6 ER - TY - JOUR A1 - Nguyen, Minh-Thu A1 - Saising, Jongkon A1 - Tribelli, Paula Maria A1 - Nega, Mulugeta A1 - Diene, Seydina M. A1 - François, Patrice A1 - Schrenzel, Jacques A1 - Spröer, Cathrin A1 - Bunk, Boyke A1 - Ebner, Patrick A1 - Hertlein, Tobias A1 - Kumari, Nimerta A1 - Härtner, Thomas A1 - Wistuba, Dorothee A1 - Voravuthikunchai, Supayang P. A1 - Mäder, Ulrike A1 - Ohlsen, Knut A1 - Götz, Friedrich T1 - Inactivation of farR Causes High Rhodomyrtone Resistance and Increased Pathogenicity in Staphylococcus aureus JF - Frontiers in Microbiology N2 - Rhodomyrtone (Rom) is an acylphloroglucinol antibiotic originally isolated from leaves of Rhodomyrtus tomentosa. Rom targets the bacterial membrane and is active against a wide range of Gram-positive bacteria but the exact mode of action remains obscure. Here we isolated and characterized a spontaneous Rom-resistant mutant from the model strain Staphylococcus aureus HG001 (RomR) to learn more about the resistance mechanism. We showed that Rom-resistance is based on a single point mutation in the coding region of farR [regulator of fatty acid (FA) resistance] that causes an amino acid change from Cys to Arg at position 116 in FarR, that affects FarR activity. Comparative transcriptome analysis revealed that mutated farR affects transcription of many genes in distinct pathways. FarR represses for example the expression of its own gene (farR), its flanking gene farE (effector of FA resistance), and other global regulators such as agr and sarA. All these genes were consequently upregulated in the RomR clone. Particularly the upregulation of agr and sarA leads to increased expression of virulence genes rendering the RomR clone more cytotoxic and more pathogenic in a mouse infection model. The Rom-resistance is largely due to the de-repression of farE. FarE is described as an efflux pump for linoleic and arachidonic acids. We observed an increased release of lipids in the RomR clone compared to its parental strain HG001. If farE is deleted in the RomR clone, or, if native farR is expressed in the RomR strain, the corresponding strains become hypersensitive to Rom. Overall, we show here that the high Rom-resistance is mediated by overexpression of farE in the RomR clone, that FarR is an important regulator, and that the point mutation in farR (RomR clone) makes the clone hyper-virulent. KW - antibiotic KW - Gram-positive bacteria KW - rhodomyrtone KW - Staphylococcus KW - membrane active Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-224117 VL - 10 ER - TY - JOUR A1 - Lang, Isabell A1 - Füllsack, Simone A1 - Wajant, Harald T1 - Lack of Evidence for a Direct Interaction of Progranulin and Tumor Necrosis Factor Receptor-1 and Tumor Necrosis Factor Receptor-2 From Cellular Binding Studies JF - Frontiers in Immunology N2 - Progranulin (PGRN) is a secreted anti-inflammatory protein which can be processed by neutrophil proteases to various granulins. It has been reported that at least a significant portion of the anti-inflammatory effects of PGRN is due to direct high affinity binding to tumor necrosis factor receptor-1 (TNFR1) and TNFR2 and inhibition of tumor necrosis factor (TNF)-induced TNFR1/2 signaling. Two studies failed to reproduce the interaction of TNFR1 and TNFR2 with PGRN, but follow up reports speculated that this was due to varying experimental circumstances and/or the use of PGRN from different sources. However, even under consideration of these speculations, there is still a striking discrepancy in the literature between the concentrations of PGRN needed to inhibit TNF signaling and the concentrations required to block TNF binding to TNFR1 and TNFR2. While signaling events induced by 0.2–2 nM of TNF have been efficiently inhibited by low, near to equimolar concentrations (0.5–2.5 nM) of PGRN in various studies, the reported inhibitory effects of PGRN on TNF-binding to TNFR1/2 required a huge excess of PGRN (100–1,000-fold). Therefore, we investigated the effect of PGRN on TNF binding to TNFR1 and TNFR2 in highly sensitive cellular binding studies. Unlabeled TNF inhibited >95% of the specific binding of a Gaussia princeps luciferase (GpL) fusion protein of TNF to TNFR1 and TNFR2 and blocked binding of soluble GpL fusion proteins of TNFR1 and TNFR2 to membrane TNF expressing cells to >95%, too. Purified PGRN, however, showed in both assays no effect on TNF–TNFR1/2 interaction even when applied in huge excess. To rule out that tags and purification- or storage-related effects compromise the potential ability of PGRN to bind TNF receptors, we directly co-expressed PGRN, and as control TNF, in TNFR1- and TNFR2-expressing cells and looked for binding of GpL-TNF. While expression of TNF strongly inhibited binding of GpL-TNF to TNFR1/2, co-expression of PGRN had not effect on the ability of the TNFR1/2-expressing cells to bind TNF. KW - binding studies KW - Gaussia princeps luciferase fusion protein KW - progranulin KW - tumor necrosis factor KW - tumor necrosis factor receptor-1 KW - tumor necrosis factor receptor-2 Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-236373 VL - 9 ER - TY - JOUR A1 - Klotz, Peter A1 - Higgins, Paul G. A1 - Schaubmar, Andreas R. A1 - Failing, Klaus A1 - Leidner, Ursula A1 - Seifert, Harald A1 - Scheufen, Sandra A1 - Semmler, Torsten A1 - Ewers, Christa T1 - Seasonal Occurrence and Carbapenem Susceptibility of Bovine Acinetobacter baumannii in Germany JF - Frontiers in Microbiology N2 - Acinetobacter baumannii is one of the leading causes of nosocomial infections in humans. To investigate its prevalence, distribution of sequence types (STs), and antimicrobial resistance in cattle, we sampled 422 cattle, including 280 dairy cows, 59 beef cattle, and 83 calves over a 14-month period. Metadata, such as the previous use of antimicrobial agents and feeding, were collected to identify putative determining factors. Bacterial isolates were identified via MALDI-TOF/MS and PCR, antimicrobial susceptibility was evaluated via VITEK2 and antibiotic gradient tests, resistance genes were identified by PCR. Overall, 15.6% of the cattle harbored A. baumannii, predominantly in the nose (60.3% of the A. baumannii isolates). It was more frequent in dairy cows (21.1%) than in beef cattle (6.8%) and calves (2.4%). A seasonal occurrence was shown with a peak between May and August. The rate of occurrence of A. baumannii was correlated with a history of use of 3rd generation cephalosporins in the last 6 months prior to sampling Multilocus sequence typing (Pasteur scheme) revealed 83 STs among 126 unique isolates. Nine of the bovine STs have previously been implicated in human infections. Besides known intrinsic resistance of the species, the isolates did not show additional resistance to the antimicrobial substances tested, including carbapenems. Our data suggest that cattle are not a reservoir for nosocomial A. baumannii but carry a highly diverse population of this species. Nevertheless, some STs seem to be able to colonize both cattle and humans. KW - ESKAPE KW - Acinetobacter baumannii KW - antimicrobial susceptibility KW - MLST KW - cattle KW - epidemiology Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-325927 VL - 10 ER - TY - JOUR A1 - Kervarrec, Thibault A1 - Samimi, Mahtab A1 - Guyétant, Serge A1 - Sarma, Bhavishya A1 - Chéret, Jérémy A1 - Blanchard, Emmanuelle A1 - Berthon, Patricia A1 - Schrama, David A1 - Houben, Roland A1 - Touzé, Antoine T1 - Histogenesis of Merkel Cell Carcinoma: A Comprehensive Review JF - Frontiers in Oncology N2 - Merkel cell carcinoma (MCC) is a primary neuroendocrine carcinoma of the skin. This neoplasia features aggressive behavior, resulting in a 5-year overall survival rate of 40%. In 2008, Feng et al. identified Merkel cell polyomavirus (MCPyV) integration into the host genome as the main event leading to MCC oncogenesis. However, despite identification of this crucial viral oncogenic trigger, the nature of the cell in which MCC oncogenesis occurs is actually unknown. In fact, several hypotheses have been proposed. Despite the large similarity in phenotype features between MCC tumor cells and physiological Merkel cells (MCs), a specialized subpopulation of the epidermis acting as mechanoreceptor of the skin, several points argue against the hypothesis that MCC derives directly from MCs. Alternatively, MCPyV integration could occur in another cell type and induce acquisition of an MC-like phenotype. Accordingly, an epithelial as well as a fibroblastic or B-cell origin of MCC has been proposed mainly based on phenotype similarities shared by MCC and these potential ancestries. The aim of this present review is to provide a comprehensive review of the current knowledge of the histogenesis of MCC. KW - merkel cell polyomavirus (MCPyV) KW - epithelial KW - fibroblast KW - B cell KW - Merkel cell carcinoma (MCC) KW - histogenesis KW - origin Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-325733 VL - 9 ER - TY - JOUR A1 - Kasaragod, Vikram B. A1 - Schindelin, Hermann T1 - Structure–Function Relationships of Glycine and GABAA Receptors and Their Interplay With the Scaffolding Protein Gephyrin JF - Frontiers in Molecular Neuroscience N2 - Glycine and γ-aminobutyric acid (GABA) are the major determinants of inhibition in the central nervous system (CNS). These neurotransmitters target glycine and GABAA receptors, respectively, which both belong to the Cys-loop superfamily of pentameric ligand-gated ion channels (pLGICs). Interactions of the neurotransmitters with the cognate receptors result in receptor opening and a subsequent influx of chloride ions, which, in turn, leads to hyperpolarization of the membrane potential, thus counteracting excitatory stimuli. The majority of glycine receptors and a significant fraction of GABAA receptors (GABAARs) are recruited and anchored to the post-synaptic membrane by the central scaffolding protein gephyrin. This ∼93 kDa moonlighting protein is structurally organized into an N-terminal G-domain (GephG) connected to a C-terminal E-domain (GephE) via a long unstructured linker. Both inhibitory neurotransmitter receptors interact via a short peptide motif located in the large cytoplasmic loop located in between transmembrane helices 3 and 4 (TM3-TM4) of the receptors with a universal receptor-binding epitope residing in GephE. Gephyrin engages in nearly identical interactions with the receptors at the N-terminal end of the peptide motif, and receptor-specific interaction toward the C-terminal region of the peptide. In addition to its receptor-anchoring function, gephyrin also interacts with a rather large collection of macromolecules including different cytoskeletal elements, thus acting as central scaffold at inhibitory post-synaptic specializations. Dysfunctions in receptor-mediated or gephyrin-mediated neurotransmission have been identified in various severe neurodevelopmental disorders. Although biochemical, cellular and electrophysiological studies have helped to understand the physiological and pharmacological roles of the receptors, recent high resolution structures of the receptors have strengthened our understanding of the receptors and their gating mechanisms. Besides that, multiple crystal structures of GephE in complex with receptor-derived peptides have shed light into receptor clustering by gephyrin at inhibitory post-synapses. This review will highlight recent biochemical and structural insights into gephyrin and the GlyRs as well as GABAA receptors, which provide a deeper understanding of the molecular machinery mediating inhibitory neurotransmission. KW - glycine receptors KW - GABAA receptors KW - gephyrin KW - moonlighting protein KW - inhibitory post-synaptic specialization KW - cytoskeletal proteins Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-325607 VL - 11 ER - TY - JOUR A1 - John, Cathy N. A1 - Abrantes, Pedro M. D. S. A1 - Prusty, Bhupesh K. A1 - Ablashi, Dharam V. A1 - Africa, Charlene W. J. T1 - K21 Compound, a Potent Antifungal Agent: Implications for the Treatment of Fluconazole-Resistant HIV-Associated Candida Species JF - Frontiers in Microbiology N2 - Background/Objectives: With mucocutaneous candidiasis being highly prevalent in HIV patients, the emergence of fluconazole-resistant Candida species forms a major challenge in treating and eradicating these infections. The objective of this study was to establish the antifungal activity of K21, a membrane-rupturing antimicrobial compound derived from a silica quaternary ammonium compound (SiQAC) with tetraethoxysilane (TEOS). Methods: The study sample included 81 Candida species of which 9 were type strains and 72 were clinical isolates. Minimum inhibitory concentrations, synergy, fractional inhibitory concentration index (FICI), and time kill assays were determined by broth microdilution. Electron microscopy (EM) was used to determine the qualitative changes brought about after treatment with K21. Results: K21 inhibited the growth of all fluconazole-resistant and susceptible Candida strains with only 2 h of exposure required to effectively kill 99.9% of the inoculum, and a definite synergistic effect was observed with a combination of K21 and fluconazole. EM demonstrated the presence of two forms of extracellular vesicles indicative of biofilm formation and cell lysis. Conclusion: The study established the efficacy of K21 as an antifungal agent and with fluconazole-resistant candidiasis on the increase, the development of K21 can provide a promising alternative to combat acquired drug resistance. KW - HIV-associated candidiasis KW - antimicrobial compounds KW - Candida KW - fluconazole KW - antifungal susceptibility KW - broth microdilution Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-323505 VL - 10 ER - TY - JOUR A1 - Gryszel, Maciej A1 - Schlossarek, Tim A1 - Würthner, Frank A1 - Natali, Mirco A1 - Głowacki, Eric Daniel T1 - Water‐soluble cationic perylene diimide dyes as stable photocatalysts for H\(_2\)O\(_2\) evolution JF - ChemPhotoChem N2 - Photocatalytic generation of hydrogen peroxide, H\(_2\)O\(_2\), has gained increasing attention in recent years, with applications ranging from solar energy conversion to biophysical research. While semiconducting solid‐state materials are normally regarded as the workhorse for photogeneration of H\(_2\)O\(_2\), an intriguing alternative for on‐demand H\(_2\)O\(_2\) is the use of photocatalytic organic dyes. Herein we report the use of water‐soluble dyes based on perylene diimide molecules which behave as true molecular catalysts for the light‐induced conversion of dissolved oxygen to hydrogen peroxide. In particular, we address how to obtain visible‐light photocatalysts which are stable with respect to aggregation and photochemical degradation. We report on the factors affecting efficiency and stability, including variable electron donors, oxygen partial pressure, pH, and molecular catalyst structure. The result is a perylene diimide derivative with unprecedented peroxide evolution performance using a broad range of organic donor molecules and operating in a wide pH range. KW - hydrogen peroxide KW - oxygen reduction reaction KW - perylene KW - photocatalysis KW - dyes/pigments Y1 - 2023 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370250 SN - 2367-0932 VL - 7 IS - 9 ER - TY - JOUR A1 - Jarick, Katja J. A1 - Mokhtari, Zeinab A1 - Scheller, Lukas A1 - Hartweg, Julia A1 - Thusek, Sina A1 - Le, Duc-Dung A1 - Ranecky, Maria A1 - Shaikh, Haroon A1 - Qureischi, Musga A1 - Heinze, Katrin G. A1 - Beilhack, Andreas T1 - Photoconversion of Alloreactive T Cells in Murine Peyer’s Patches During Acute Graft-Versus-Host Disease: Tracking the Homing Route of Highly Proliferative Cells In Vivo JF - Frontiers in Immunology N2 - The regulation of immune cell migration throughout the body is essential to warrant immunosurveillance and to maintain immune homeostasis. Marking and tracking of these cells has proven important to study mechanisms of immune cell trafficking and cell interaction in vivo. Photoconversion is a well-suited technique for intravital application because it enables contactless time- and location-specific marking of cells in the tissue without surgically manipulating the microenvironment of the cells in question. However, in dividing cells the converted fluorescent protein may decline quickly. Here, we provide a detailed description of the photoconversion technique and its applicability to tracking highly proliferating T cells from the priming site of T cell activation to peripheral target organs of effector function in a preclinical model. Dendra2+ T cells were photoconverted in the Peyer’s patches during the initiation phase of acute graft-versus-host disease (GvHD) and tracked through the mesenteric lymph nodes and the peripheral blood to the small intestine with flow cytometry and intravital two-photon microscopy. Photoconverted alloreactive T cells preserved the full proliferative capacity, homing, and migration of alloreactive T cells in the intestinal lamina propria. We conclusively proved that photoconversion of highly proliferative alloreactive T cells in the Peyer’s patches is an effective tool to study trafficking of alloreactive T cells under physiologic conditions and to GvHD target tissues. This technique can also be applied to the study of immune cell tracking under inflammatory and non-inflammatory conditions. KW - T cell migration KW - acute graft-versus-host disease KW - mouse models KW - photoconversion KW - Dendra2 KW - Peyer's patch KW - in vivo cell tracking KW - lymphocyte homing Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-323309 VL - 9 ER - TY - JOUR A1 - Herster, Franziska A1 - Bittner, Zsofia A1 - Codrea, Marius Cosmin A1 - Archer, Nathan K. A1 - Heister, Martin A1 - Löffler, Markus W. A1 - Heumos, Simon A1 - Wegner, Joanna A1 - Businger, Ramona A1 - Schindler, Michael A1 - Stegner, David A1 - Schäkel, Knut A1 - Grabbe, Stephan A1 - Ghoreschi, Kamran A1 - Miller, Lloyd S. A1 - Weber, Alexander N. R. T1 - Platelets Aggregate With Neutrophils and Promote Skin Pathology in Psoriasis JF - Frontiers in Immunology N2 - Psoriasis is a frequent systemic inflammatory autoimmune disease characterized primarily by skin lesions with massive infiltration of leukocytes, but frequently also presents with cardiovascular comorbidities. Especially polymorphonuclear neutrophils (PMNs) abundantly infiltrate psoriatic skin but the cues that prompt PMNs to home to the skin are not well-defined. To identify PMN surface receptors that may explain PMN skin homing in psoriasis patients, we screened 332 surface antigens on primary human blood PMNs from healthy donors and psoriasis patients. We identified platelet surface antigens as a defining feature of psoriasis PMNs, due to a significantly increased aggregation of neutrophils and platelets in the blood of psoriasis patients. Similarly, in the imiquimod-induced experimental in vivo mouse model of psoriasis, disease induction promoted PMN-platelet aggregate formation. In psoriasis patients, disease incidence directly correlated with blood platelet counts and platelets were detected in direct contact with PMNs in psoriatic but not healthy skin. Importantly, depletion of circulating platelets in mice in vivo ameliorated disease severity significantly, indicating that both PMNs and platelets may be relevant for psoriasis pathology and disease severity. KW - psoriasis KW - neutrophil KW - platelet KW - platelet-neutrophil complexes (PNCs) KW - imiquimod Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-320175 VL - 10 ER - TY - JOUR A1 - Hammer, Eva M. A1 - Halder, Sebastian A1 - Kleih, Sonja C. A1 - Kübler, Andrea T1 - Psychological Predictors of Visual and Auditory P300 Brain-Computer Interface Performance JF - Frontiers in Neuroscience N2 - Brain-Computer Interfaces (BCIs) provide communication channels independent from muscular control. In the current study we used two versions of the P300-BCI: one based on visual the other on auditory stimulation. Up to now, data on the impact of psychological variables on P300-BCI control are scarce. Hence, our goal was to identify new predictors with a comprehensive psychological test-battery. A total of N = 40 healthy BCI novices took part in a visual and an auditory BCI session. Psychological variables were measured with an electronic test-battery including clinical, personality, and performance tests. The personality factor “emotional stability” was negatively correlated (Spearman's rho = −0.416; p < 0.01) and an output variable of the non-verbal learning test (NVLT), which can be interpreted as ability to learn, correlated positively (Spearman's rho = 0.412; p < 0.01) with visual P300-BCI performance. In a linear regression analysis both independent variables explained 24% of the variance. “Emotional stability” was also negatively related to auditory P300-BCI performance (Spearman's rho = −0.377; p < 0.05), but failed significance in the regression analysis. Psychological parameters seem to play a moderate role in visual P300-BCI performance. “Emotional stability” was identified as a new predictor, indicating that BCI users who characterize themselves as calm and rational showed worse BCI performance. The positive relation of the ability to learn and BCI performance corroborates the notion that also for P300 based BCIs learning may constitute an important factor. Further studies are needed to consolidate or reject the presented predictors. KW - predictors KW - visual P300-BCI KW - auditory P300-BCI KW - NVLT KW - emotional stability Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369207 VL - 12 ER - TY - JOUR A1 - Gronwald, Thomas A1 - Hoos, Olaf A1 - Hottenrott, Kuno T1 - Effects of Acute Normobaric Hypoxia on Non-linear Dynamics of Cardiac Autonomic Activity During Constant Workload Cycling Exercise JF - Frontiers in Physiology N2 - Aim: Measurements of Non-linear dynamics of heart rate variability (HRV) provide new possibilities to monitor cardiac autonomic activity during exercise under different environmental conditions. Using detrended fluctuation analysis (DFA) technique to assess correlation properties of heart rate (HR) dynamics, the present study examines the influence of normobaric hypoxic conditions (HC) in comparison to normoxic conditions (NC) during a constant workload exercise. Materials and Methods: Nine well trained cyclists performed a continuous workload exercise on a cycle ergometer with an intensity corresponding to the individual anaerobic threshold until voluntary exhaustion under both NC and HC (15% O2). The individual exercise duration was normalized to 10% sections (10–100%). During exercise HR and RR-intervals were continuously-recorded. Besides HRV time-domain measurements (meanRR, SDNN), fractal correlation properties using short-term scaling exponent alpha1 of DFA were calculated. Additionally, blood lactate (La), oxygen saturation of the blood (SpO2), and rating of perceived exertion (RPE) were recorded in regular time intervals. Results: We observed significant changes under NC and HC for all parameters from the beginning to the end of the exercise (10% vs. 100%) except for SpO2 and SDNN during NC: increases for HR, La, and RPE in both conditions; decreases for SpO2 and SDNN during HC, meanRR and DFA-alpha1 during both conditions. Under HC HR (40–70%), La (10–90%), and RPE (50–90%) were significantly-higher, SpO2 (10–100%), meanRR (40–70%), and DFA-alpha1 (20–60%) were significantly-lower than under NC. Conclusion: Under both conditions, prolonged exercise until voluntary exhaustion provokes a lower total variability combined with a reduction in the amplitude and correlation properties of RR fluctuations which may be attributed to increased organismic demands. Additionally, HC provoked higher demands and loss of correlation properties at an earlier stage during the exercise regime, implying an accelerated alteration of cardiac autonomic regulation. KW - autonomic nervous system KW - heart rate variability KW - detrended fluctuation analysis KW - endurance exercise KW - voluntary exhaustion KW - hypoxia Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369199 VL - 10 ER - TY - JOUR A1 - Geran, Rohat A1 - Uecker, Florian C. A1 - Prüss, Harald A1 - Haeusler, Karl Georg A1 - Paul, Friedemann A1 - Ruprecht, Klemens A1 - Harms, Lutz A1 - Schmidt, Felix A. T1 - Olfactory and Gustatory Dysfunction in Patients With Autoimmune Encephalitis JF - Frontiers in Neurology N2 - Objective: To test the hypothesis that olfactory (OF) and gustatory function (GF) is disturbed in patients with autoimmune encephalitides (AE). Methods: The orthonasal OF was tested in 32 patients with AE and 32 age- and sex-matched healthy controls (HC) with the standardized Threshold Discrimination Identification (TDI) score. This validated olfactory testing method yields individual scores for olfactory threshold (T), odor discrimination (D), and identification (I), along with a composite TDI score. The GF was determined by the Taste Strip Test (TST). Results: Overall, 24/32 (75%) of patients with AE, but none of 32 HC (p < 0.001) had olfactory dysfunction in TDI testing. The results of the threshold, discrimination and identification subtests were significantly reduced in patients with AE compared to HC (all p < 0.001). Assessed by TST, 5/19 (26.3%) of patients with AE, but none of 19 HC presented a significant limitation in GF (p < 0.001). The TDI score was correlated with the subjective estimation of the olfactory capacity on a visual analog scale (VAS; rs = 0.475, p = 0.008). Neither age, sex, modified Rankin Scale nor disease duration were associated with the composite TDI score. Conclusions: This is the first study investigating OF and GF in AE patients. According to unblinded assessment, patients with AE have a reduced olfactory and gustatory capacity compared to HC, suggesting that olfactory and gustatory dysfunction are hitherto unrecognized symptoms in AE. Further studies with larger number of AE patients would be of interest to verify our results. KW - autoimmune encephalitis KW - olfactory dysfunction KW - gustatory dysfunction KW - olfactory testing KW - threshold discrimination identification test Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-232921 VL - 10 ER - TY - JOUR A1 - Gál, Bernadett I. A1 - Kilencz, Tünde A1 - Albert, Anita A1 - Demeter, Ildikó A1 - Hegedűs, Klára Mária A1 - Janka, Zoltán A1 - Csifcsák, Gábor A1 - Álmos, Péter Z. T1 - Mild Effect of Nalmefene on Alcoholic Cue-Induced Response Invigoration in Alcohol Use Disorder Without Accompanying Changes in Electrophysiological Signatures of Early Visual Processing and Executive Control JF - Frontiers in Pharmacology N2 - Nalmefene is approved for as-needed pharmacological treatment in alcohol use disorder (AUD) by the European Medicines Agency. While the cellular effects of nalmefene have been thoroughly investigated, data are very limited on how this agent influences neural signals associated with inhibitory control and the visual analysis of environmental cues. This double-blind crossover study assessed the behavioral and neural effects of acute nalmefene administration in patients diagnosed with AUD. In experiment 1, we validated our experimental paradigm (electroencephalography combined with a modified Go/NoGo task using images of alcoholic and nonalcoholic drinks as prime stimuli) in 20 healthy adults to ensure that our protocol is suitable for assessing the behavioral and neural aspects of executive control. In experiment 2, we recruited 19 patients with AUD, and in a double-blind crossover design, we investigated the effects of nalmefene versus placebo on task performance (response accuracy, the sensitivity index, and reaction times), visual responses to appetitive cues (occipital P1, N1, and P2 components), and electrophysiological markers of conflict detection and response inhibition (frontal N2 and P3 waveforms). Under placebo, patients produced faster reaction times to alcohol-primed Go stimuli, an effect that was weak despite being statistically significant. However, the effect of alcoholic cues on the speed of response initiation disappeared after receiving nalmefene. We found no placebo versus nalmefene difference regarding our patients’ ability to accurately inhibit responses to NoGo stimuli or for occipital and frontal event-related potentials. Our results suggest that nalmefene might be potent in reducing the vigor to act upon alcoholic cues in AUD patients, but this effect is most probably mediated via subcortical (rather than cortical) neural circuits. KW - nalmefene KW - alcohol use disorder KW - response inhibition KW - incentive salience KW - event-related potentials KW - Go/NoGo task Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369182 VL - 10 ER - TY - JOUR A1 - Franke, Maximilian A1 - Conzelmann, Annette A1 - Grünblatt, Edna A1 - Werling, Anna M. A1 - Spieles, Helen A1 - Wewetzer, Christoph A1 - Warnke, Andreas A1 - Romanos, Marcel A1 - Walitza, Susanne A1 - Renner, Tobias J. T1 - No Association of Variants of the NPY-System With Obsessive-Compulsive Disorder in Children and Adolescents JF - Frontiers in Molecular Neuroscience N2 - Obsessive-compulsive disorder (OCD) causes severe distress and is therefore counted by the World Health Organisation (WHO) as one of the 10 most impairing illnesses. There is evidence for a strong genetic underpinning especially in early onset OCD (eoOCD). Though several genes involved in neurotransmission have been reported as candidates, there is still a need to identify new pathways. In this study, we focussed on genetic variants of the Neuropeptide Y (NPY) system. NPY is one of the most abundant neuropeptides in the human brain with emerging evidence of capacity to modulate stress response, which is of high relevance in OCD. We focussed on tag-SNPs of NPY and its receptor gene NPY1R in a family-based approach. The sample comprised 86 patients (children and adolescents) with eoOCD with both their biological parents. However, this first study on genetic variants of the NPY-system could not confirm the association between the investigated SNPs and eoOCD. Based on the small sample size results have to be interpreted as preliminary and should be replicated in larger samples. However, also in an additional GWAS analysis in a large sample, we could not observe an associations between NPY and OCD. Overall, these preliminary results point to a minor role of NPY on the stress response of OCD. KW - NPY KW - obsessive-compulsive KW - children KW - anxiety KW - neuropeptide Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-229051 VL - 12 ER - TY - JOUR A1 - Fahmy-Garcia, Shorouk A1 - Farrell, Eric A1 - Witte-Bouma, Janneke A1 - Robbesom-van den Berge, Iris A1 - Suarez, Melva A1 - Mumcuoglu, Didem A1 - Walles, Heike A1 - Kluijtmans, Sebastiaan G. J. M. A1 - van der Eerden, Bram C. J. A1 - van Osch, Gerjo J. V. M. A1 - van Leeuwen, Johannes P. T. M. A1 - van Driel, Marjolein T1 - Follistatin Effects in Migration, Vascularization, and Osteogenesis in vitro and Bone Repair in vivo JF - Frontiers in Bioengineering and Biotechnology N2 - The use of biomaterials and signaling molecules to induce bone formation is a promising approach in the field of bone tissue engineering. Follistatin (FST) is a glycoprotein able to bind irreversibly to activin A, a protein that has been reported to inhibit bone formation. We investigated the effect of FST in critical processes for bone repair, such as cell recruitment, osteogenesis and vascularization, and ultimately its use for bone tissue engineering. In vitro, FST promoted mesenchymal stem cell (MSC) and endothelial cell (EC) migration as well as essential steps in the formation and expansion of the vasculature such as EC tube-formation and sprouting. FST did not enhance osteogenic differentiation of MSCs, but increased committed osteoblast mineralization. In vivo, FST was loaded in an in situ gelling formulation made by alginate and recombinant collagen-based peptide microspheres and implanted in a rat calvarial defect model. Two FST variants (FST288 and FST315) with major differences in their affinity to cell-surface proteoglycans, which may influence their effect upon in vivo bone repair, were tested. In vitro, most of the loaded FST315 was released over 4 weeks, contrary to FST288, which was mostly retained in the biomaterial. However, none of the FST variants improved in vivo bone healing compared to control. These results demonstrate that FST enhances crucial processes needed for bone repair. Further studies need to investigate the optimal FST carrier for bone regeneration. KW - follistatin 315 (FST315) KW - follistatin 288 (FST288) KW - migration KW - vascularization KW - osteogenesis KW - injectable in situ gelling slow release system KW - bone tissue engineering KW - regenerative medicine Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-227617 VL - 7 ER - TY - JOUR A1 - Gil-Sepulcre, Marcos A1 - Lindner, Joachim O. A1 - Schindler, Dorothee A1 - Velasco, Lucía A1 - Moonshiram, Dooshaye A1 - Rüdiger, Olaf A1 - DeBeer, Serena A1 - Stepanenko, Vladimir A1 - Solano, Eduardo A1 - Würthner, Frank A1 - Llobet, Antoni T1 - Surface-promoted evolution of Ru-bda coordination oligomers boosts the efficiency of water oxidation molecular anodes JF - Journal of the American Chemical Society N2 - A new Ru oligomer of formula {[Ru-\(^{II}\)(bda-\(\kappa\)-N\(^2\)O\(^2\))(4,4'-bpy)]\(_{10}\)(4,4'-bpy)}, 10 (bda is [2,2'-bipyridine]-6,6'-dicarbox-ylate and 4,4'-bpy is 4,4'-bipyridine), was synthesized and thoroughly characterized with spectroscopic, X-ray, and electrochemical techniques. This oligomer exhibits strong affinity for graphitic materials through CH-\(\pi\) interactions and thus easily anchors on multiwalled carbon nanotubes (CNT), generating the molecular hybrid material 10@CNT. The latter acts as a water oxidation catalyst and converts to a new species, 10'(H\(_2\)O)\(_2\)@CNT, during the electrochemical oxygen evolution process involving solvation and ligand reorganization facilitated by the interactions of molecular Ru catalyst and the surface. This heterogeneous system has been shown to be a powerful and robust molecular hybrid anode for electrocatalytic water oxidation into molecular oxygen, achieving current densities in the range of 200 mA/cm\(^2\) at pH 7 under an applied potential of 1.45 V vs NHE. The remarkable long-term stability of this hybrid material during turnover is rationalized based on the supramolecular interaction of the catalyst with the graphitic surface. KW - electrodes KW - ligands KW - oligomers KW - surface interactions KW - water oxidation Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-351514 VL - 143 IS - 30 ER - TY - THES A1 - Geißendörfer, Lisa T1 - The Macroeconomic Dimensions of Credit: A Comprehensive Analysis of Finance, Inequality and Growth T1 - Die makroökonomischen Dimensionen von Kredit: Eine umfassende Analyse von Finanzsystem, Ungleichheit und Wachstum N2 - Besonders einflussreich für das moderne Verständnis zur makroökonomischen Rolle von Banken und Kredit ist die monetäre Wachstumstheorie von Schumpeter. Ausgehend von dieser wird in dieser Dissertation die makroökonomische Rolle des Finanzsystems für die (1) Erzeugung von Wirtschaftswachstum, (2) Lenkung von ökonomischen Ressourcen und (3) Verteilung von Wohlstand untersucht. In Kapitel 3 wird zunächst empirisch gezeigt, dass 1.) ein positiver Zusammenhang zwischen dem Wachstum von Krediten und Wirtschaftswachstum besteht, auch für entwickelte Länder, 2.) kein empirischer Zusammenhang von Haushaltssparen und Wirtschaftswachstum festgestellt werden kann, und 3.) auf länderspezifischer Ebene sowohl positive, als auch negative und insignifikante Effekte von Kredit auf Wirtschaftswachstum existieren. Damit zeigt sich eine breite empirische Evidenz für Schumpeters monetäre Hypothesen. Eine besonders interessante Anwendung von Schumpeters Wachstumstheorie zeigt sich in China. Die Ergebnisse der empirischen Analyse legen nahe, dass es generell einen positiven Zusammenhang zwischen Kredit- und Wirtschaftswachstum in China gibt, der aber nicht linear in Bezug auf Regionen, Zeitpunkte und Größe des Finanzsystems ist. Weiterhin deuten die Ergebnisse darauf hin, dass die kreditfinanzierte Industriepolitik in China zu mehr Investitionen und BIP-Wachstum beigetragen haben könnte, wobei es jedoch Nichtlinearitäten zwischen einzelnen Branchen und Unternehmenstypen gibt. Zuletzt wird in Kapitel 5 die Frage aufgeworfen, welche Rolle das Finanzsystem bei der Verteilung des Wohlstands spielt. Während Kredite an Haushalte und Unternehmen, zusammen mit Indikatoren zum Arbeits- und Sparverhalten, sowie zur Altersstruktur der Bevölkerung, die wichtigsten Determinanten von Vermögensungleichheit sind, zeigen sich in der Beziehung von Krediten und Vermögensungleichheit ebenfalls verschiedene Nichtlinearitäten, u.a. im Bezug auf den Entwicklungsstand von Finanzsystemen und Wohneigentumsquoten. N2 - Schumpeter's monetary growth theory is particularly influential for the modern understanding of the macroeconomic role of banks and credit. Based on this theory, this dissertation examines the macroeconomic role of the financial system, especially credit, in (1) generating economic growth, (2) directing economic resources and (3) distributing wealth. Chapter 3 first shows empirically that 1) there is a positive correlation between the growth of credit and economic growth, even for developed countries, 2) no empirical correlation between household saving and economic growth can be established, and 3) there are both positive, negative and insignificant effects of credit on economic growth at country-specific level. Thus, there is broad empirical support for Schumpeter's monetary hypotheses. A particularly interesting application of Schumpeter's growth theory can be seen in China. The results of the empirical study suggest that there is generally a positive correlation between credit and economic growth in China, that is, however, not linear in terms of regions, time and size of the financial system. Furthermore, the results in Chapter 4 suggest that credit-financed industrial policy in China may have contributed to more investment and GDP growth, although there are non-linearities between individual industries and types of companies. Finally, Chapter 5 raises the question of the role of the financial system in the distribution of wealth. While credit to households and companies, together with indicators of working and saving behavior and the age structure of the population, are the most important determinants of wealth inequality, there are also various non-linearities in the relationship between credit and wealth inequality, including in relation to the level of development of financial systems and home ownership ratios. KW - Kredit KW - Wirtschaftswachstum KW - Industriepolitik KW - Ungleichheit KW - Finance-Growth-Nexus KW - Vermögensungleichheit KW - Finanzwirtschaft KW - Finanzsystem Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-370037 ER - TY - THES A1 - Waltmann, Maria T1 - Neurocognitive mechanisms of loss of control in Binge Eating Disorder T1 - Neurokognitive Mechanismen des Kontrollverlusts im Rahmen der Binge- Eating-Störung N2 - Binge Eating Disorder (BED) is a common, early-onset mental health condition characterised by uncontrollable episodes of overeating followed by negative emotions such as guilt and shame. An improved understanding of the neurocognitive mechanisms underlying BED is central to the development of more targeted and effective treatments. This thesis comprises a systematic review and three empirical studies contributing to this endeavour. BED can be thought of as a disorder of cognitive-behavioural control. Indeed, self-report evidence points towards enhanced impulsivity and compulsivity in BED. However, retrospective self-reports do not capture the mechanisms underlying impulsive and compulsive lapses of control in the moment. The systematic review therefore focussed on the experimental literature on impulsivity and compulsivity in BED. The evidence was very mixed, although there was some indication of altered goal-directed control and behavioural flexibility in BED. We highlight poor reliability of experimental paradigms and the failure to properly account for weight status as potential reasons for inconsistencies between studies. Moreover, we propose that impulsivity and/or compulsivity may be selectively enhanced in negative mood states in BED and may therefore not be consistently detected in lab-based studies. In the empirical studies, we explored the role of behavioural flexibility in BED using experimental and neuroimaging methods in concert with computational modelling. In the first empirical study, we assessed the reliability of a common measure of behavioural flexibility, the Probabilistic Reversal Learning Task (PRLT). We demonstrate that the behavioural and computational metrics of the PRLT have sufficient reliability to justify past and future applications if calculated using hierarchical modelling. This substantially improves reliability by reducing error variance. The results support the use of the PRLT in the second and third empirical studies on development and BED. Because a majority of patients develop BED as adolescents or young adults, we speculated that it may emerge as a consequence of disrupted or deficient maturation of behavioural flexibility. Little is known about typical development in this domain. We therefore investigated normative development of reversal learning from adolescence to adulthood in the second empirical study. Typically- developing adolescents exhibited less adaptive and more erratic and explorative behaviour than adults. This behaviour was accounted for by reduced sensitivity to positive feedback in a reinforcement learning model, and partially mediated by reduced activation reflecting uncertainty in the medial prefrontal cortex, a region known to mature substantially during adolescence. In the third empirical study, we investigated reversal learning in BED, paying special attention to potential biases associated with learning from wins vs learning from losses. We speculated that negative urgency could make it more difficult for BED patients to learn and make decisions under pressure to avoid losses. To dissociate between effects of excess weight and BED, we collected data from obese individuals with and without BED as well as normal-weight controls. As hypothesised, there were subtle neurocognitive differences between obese participants with and without BED with regard to learning to obtain rewards and to avoid losses. Obese individuals showed relatively impaired learning to obtain rewards, while BED patients showed relatively impaired learning to avoid losses. This was reflected in differential learning signals in the brain and associated with BED symptom severity. In sum, this thesis shows that the evidence on impulsivity and compulsivity in BED is inconsistent and offers potential explanations for this inconsistency. It highlights the need for reliability in interindividual difference research and indicates ways to improve it. Further, it charts the typical development of reversal learning from adolescence to adulthood and underscores the relevance of exploration in the context of learning and decision-making in adolescence. Finally, it demonstrates qualitative differences between BED and obesity, hinting at a pivotal role of aversive states in loss of control in BED. N2 - Binge-Eating-Störung (BES) ist eine weit verbreitete psychische Erkrankung, die häufig im Jugend- oder jungen Erwachsenenalter beginnt und von Episoden unkontrollierten Überessens gefolgt von negativen Emotionen wie Schuld und Scham gekennzeichnet ist. Ein verbessertes Verständnis der neurokognitiven Mechanismen, die der BES zugrunde liegen, ist zentral für die Entwicklung zielgerichteterer und effektiverer Therapieansätze. Die vorliegende Dissertation umfasst eine systematische Übersichtsarbeit und drei empirische Studien, die zu diesem Vorhaben beitragen. BES kann als eine Störung der kognitiven oder Verhaltenskontrolle betrachtet werden. Selbsteinschätzungsdaten aus Fragebogenstudien deuten klar auf erhöhte Impulsivität und Zwanghaftigkeit hin. Retrospektive Selbsteinschätzungsdaten können jedoch wenig Aufschluss über die Mechanismen geben, die impulsiven und zwanghaften Kontrollverlusten zugrunde liegen. Als Ausgangspunkt dieser Arbeit haben wir daher eine systematische Übersicht der experimentellen Literatur zu Impulsivität und Zwanghaftigkeit bei BES erstellt, die in dieser Hinsicht mehr Einblick verspricht. Die Studienlage war sehr heterogen, aber es gab vorläufige Hinweise auf veränderte zielgerichtete Kontrolle und Verhaltensflexibilität bei BES. Wir zeigen auf, dass unzureichende Reliabilität experimenteller Paradigmen und mangelnde Berücksichtigung wichtiger Störvariablen wie Körpergewicht mögliche Gründe für die großen Inkonsistenzen zwischen Studien sein könnten. Weiterhin vermuten wir, dass Impulsivität und/oder Zwanghaftigkeit im Rahmen der BES selektiv erhöht sein könnten, wenn Patient*innen sich in negativen Gemütszuständen befinden, und daher in Laborstudien nicht konsistent nachgewiesen werden können. Die empirischen Studien untersuchten die Rolle von Verhaltensflexibilität bei BES anhand experimenteller und bildgebender Verfahren sowie mathematischer Modellierung. In der ersten empirischen Studie untersuchten wir die Reliabilität der Probabilistic Reversal Learning Task (PRLT), eines gängigen Maßes der Verhaltensflexibilität. Wir konnten zeigen, dass die Verhaltensmaße und Metriken der mathematischen Modelle der PRLT adäquate Reliabilität aufweisen – allerdings nur, wenn sie anhand von hierarchischen Modellen errechnet werden. Letzteres reduziert die Fehlervarianz und verbessert die Reliabilität damit erheblich. Die Ergebnisse stützen die Verwendung der PRLT in unseren Studien zu Verhaltensflexibilität in der Entwicklung und bei BES. Da BES seine Erstmanifestation oft im Jugend- oder frühen Erwachsenenalter hat, liegt die Vermutung nahe, dass sie sich als Folge einer gestörten oder defizitären Reifung der Verhaltensflexibilität entwickeln könnte. Da jedoch wenig über die typische Entwicklung in diesem Bereich bekannt ist, haben wir in der zweiten empirischen Studie zunächst die normative Entwicklung von Reversal- Learning vom Jugend- zum Erwachsenenalter untersucht. Gesunde Jugendliche zeigten weniger adaptives, erratischeres und explorativeres Verhalten als Erwachsene. Unser mathematisches Modell des Verstärkungslernens erklärt dieses Muster durch eine verringerte Empfindlichkeit gegenüber positivem Feedback. Zudem konnten wir zeigen, dass dieses Verhalten teilweise durch reduzierte Aktivierung des medialen prefrontalen Kortex vermittelt war, einer Region, die im Jugendalter eine substanzielle Reifung durchmacht. In der dritten empirischen Studie haben wir schließlich Reversal-Learning bei BES untersucht und dabei spezielles Augenmerk auf potenzielle Verzerrungen im Lernen zum Erlangen von Belohnungen im Gegensatz zum Lernen zur Verlustvermeidung gelegt. Um Effekte von BES und Adipositas zu unterscheiden, haben wir Daten von adipösen Personen mit und ohne BES, sowie gesunden Normalgewichtigen erhoben. Wie erwartet gab es subtile neurokognitive Unterschiede zwischen adipösen Proband*innen mit und ohne BES im Hinblick auf Lernen zum Erlangen von Belohnungen und Vermeiden von Verlusten. So war Adipositas durch relativ beeinträchtigtes Lernen zum Erlangen von Belohnungen gekennzeichnet, während BES durch relativ beeinträchtigtes Lernen zur Vermeidung von Verlusten gekennzeichnet war. Dieser Unterschied spiegelte sich in der neuronalen Kodierung von Lernsignalen wieder und korrelierte mit der Symptomschwere der BES. Zusammenfassend zeigt diese Dissertation, dass die Literatur zu Impulsivität und Zwanghaftigkeit in BES inkonsistent ist und legt Gründe für diese Inkonsistenzen nahe. Sie hebt die kritische Rolle der Reliabilität von Instrumenten in der Forschung in differentieller und klinischer Psychologie sowie Psychiatrie hervor und zeigt Möglichkeiten auf, diese zu verbessern. Weiterhin zeichnet sie ein Bild der Entwicklung von Reversal Learning vom Jugend- zum Erwachsenenalter und unterstreicht die Relevanz von Explorationsverhalten im Kontext von Lernen und Entscheiden im Jugendalter. Schließlich zeigt sie qualitative Unterschiede zwischen BES und Adipositas auf und legt weitere Forschung in Hinblick auf eine möglicherweise zentrale Rolle negativer Emotionen für Kontrollverlust bei BES nahe. KW - Binge-eating Disorder KW - Kognitive Entwicklung KW - Reliabilität KW - Impulsivität KW - Computational Psychiatry KW - fMRI / Neuroimaging KW - Binge-Eating-Störung Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-364300 ER - TY - THES A1 - Jorgacevic, Ivana T1 - Elucidating the interconnection of GvHD and Western diet-induced atherosclerosis T1 - Aufklärung des Zusammenhangs von GvHD und durch westliche Ernährung induzierter Atherosklerose N2 - Allogeneic hematopoietic cell transplantation (Allo-HCT) is the main and only treatment for many malignant and non-malignant haematological disorders. Even though the treatment has improved through the years and patient life expectancy has increased, graft versus host disease (GvHD) is still considered the main obstacle and one of the main reasons for increased mortality. Furthermore, improved patient’s survival and life expectancy brought into question the late post-HCT complications. The leading cause of late death after allo-HCT is the relapse of primary disease as well as chronic GvHD (cGvHD). However, a clear relationship was also described with pulmonary complications, endocrine dysfunction and infertility, and cataracts in post-HCT patients. In the last years big concern regarding a cumulative cardiovascular incidence in long-term survivors has been raised. Severe cardiovascular disease (CVD) is caused by atherosclerosis which is considered a chronic inflammatory disease of blood vessels. As such, it takes a long time from endothelial damage, as the onset event, and followed plaque formation to a manifestation of severe consequences, such as stroke, coronary heart disease, or peripheral arterial disease. Endothelial damage is well documented in patients post-HCT. In the context of allo-HCT, the endothelial damage is induced by the conditioning regimen with or without total body irradiation (TBI). Furthermore, endothelial cells (ECs) have been documented as a target of GvHD and increased concentration of circulating endothelial cells (CEC) coinciding with an increase in the number of circulating alloreactive T cells. According to 2021 ESC Guidelines on CVD prevention, the main atherosclerotic CVD (ASCVD) risk factors are blood apolipoprotein B (ApoB)-containing lipoproteins (of which low-density lipoprotein (LDL) is the most abundant), high blood pressure, cigarette smoking and diabetes mellitus (DM). GvHD is considered a high-risk factor for the onset of dyslipidaemia, hypertension, and DM. Overall, the risk of premature cardiovascular death is 2.7 fold increased in comparison to the general population, while the cumulative incidence of cardiovascular complications was shown to be up to 47% at ten years after reduced intensity conditioning (RIC), post-HCT. However, up to date, there are no available studies elucidating the interconnection between GvHD and atherosclerosis. The goal of this study was, therefore, to investigate the involvement of GvHD in the progression of atherosclerosis as well as to elucidate whether cytotoxic, CD8+ T cells that were shown to play a significant role in endothelial damage during the course of skin GvHD on one hand, and inducers of formation of unstable plaque on the other, are involved in this interconnection. For that purpose we established a novel minor histocompatibility anti gens (miHAg) allo-HCT Western diet (WD)-induced atherosclerosis mouse model. We were able to show that GvHD has a significant impact on atherosclerosis development in B6.Ldlr−/− recipient mice even in the absence of overt clinical disease activity. It seems that the impact is at least partly induced by CD8+ T cells, that showed significantly increased infiltration of aortic lesions in mice facing subclinical GvHD. As studies have shown in regular atherosclerotic mouse models as well as in humans, these CD8+ T cells exhibited not only increased expression of genes involved in activation, survival and differentiation to cytotoxic phenotype, but also some genes pointing out their exhaustion, that were absent in CD4+ T cell cluster. When anti-CD8β antibody was applied once per week along with WD feeding for eight weeks, the plaque formation was significantly reduced in aorta and aortic root pointing out the importance of these cells in an alloreactivity induced lesion formation. Furthermore, anti-CD8β treatment led to significantly decreased necrotic core formation followed by overall increase in plaque stability. Strikingly, bone marrow plus T cells (BMT) recipients fed WD showed significantly increased serum cholesterol levels in comparison to bone marrow (BM) (a group lacking alloreactive T cells that induce GvHD). This effect was reversed when anti-CD8β treatment was applied, suggesting, at least partly, an impact of alloreactive CD8+ T cells on cholesterol levels. Expression of genes responsible for lipid metabolism pointed out the tendency of the liver to regulate the increased cholesterol levels, however, the mechanism behind this phenotype still remains to be revealed. On the other hand, the impact of obesity, induced by chronic high-fat diet (HFD) feeding, has been shown to be an independent risk factor for gastrointestinal GvHD. Similarly, in major histocompatibility complex (MHC) disparate allo-HCT mouse model, we have noticed that even short-term WD intake leads to a significant decrease in survival of mice post-HCT. When the concentration of transplanted alloreactive T cells was reduced, the survival was improved, pointing out the involvement of these cells in the pathogenesis. Additionally, bioluminescence imaging (BLI) during initiation and effector phase of acute GvHD (aGvHD) revealed increased infiltration of alloreactive T cells in mice fed WD. Studies in an obesity model, we could confirm the involvement of specifically CD4+ T cells in WD induced impact, as the relative number of these cells was significantly increased in small intestine on day six post-HCT in mice fed WD. This increased intestinal infiltration was preceded by increase in the number of alloreactive T cells expressing intestine homing receptor (α4β7 integrin) in peripheral lymph nodes (LNs). Even though the number of T cells was not changed in the spleen of WD fed mice, the subset of CD4+ and CD8+ T cells that were highly secreting TNFα was increased as well as the expression of genes regulating pro-inflammatory cytokines such as IL-6 and interferon (IFN)γ pointing out significant WD-induced inflammation. Moreover, slight tendency towards increased intestinal permeability and load of translocated luminal bacteria, that we observed, could induce severe endotoxemia and dysregulated systemic immune response that could lead to detrimental induction of cell death. Justifying our speculations, we noted increased levels of transaminases and an increase in lactate dehydrogenase (LDH) levels (pointing out significant tissue damages). However, the exact mechanism behind this detrimental WD impact still remains to be elucidated. N2 - Die allogene hämatopoetische Zelltransplantation (engl.: allogeneic hematopoietic cell transplantation; allo-HCT) ist die wichtigste und einzige Behandlung für viele bösartige und nicht bösartige hämatologische Erkrankungen. Auch wenn sich die Behandlung im Laufe der Jahre verbessert hat und die Lebenserwartung der Patienten gestiegen ist, gilt die Transplantat-gegen-Wirt-Krankheit (engl.: graft versus host disease; GvHD) nach wie vor als Haupthindernis und ist einer der Hauptgründe für die erhöhte Sterblichkeit. Darüber hinaus hat die Verbesserung der Überlebensrate und der Lebenserwartung der Patienten dazu geführt, dass die Spätkomplikationen nach der HCT in Frage gestellt wer den. Die Hauptursache für den späten Tod nach einer allo-HCT ist das Wiederauftreten der Primärerkrankung und die chronische GvHD (cGvHD). Es wurde jedoch auch ein ein deutiger Zusammenhang mit pulmonalen Komplikationen, endokriner Dysfunktion und Unfruchtbarkeit sowie Katarakten bei Patienten nach einer HCT beschrieben. In den letzten Jahren wurde große Besorgnis hinsichtlich einer kumulativen kardio vaskulären Inzidenz bei Langzeitüberlebenden geäußert. Schwere Herz-Kreislauf Erkrankungen werden durch Atherosklerose verursacht, die als chronische Entzündu ngserkrankung der Blutgefäße gilt. Von der Endothelschädigung als Beginn und der anschließenden Plaquebildung bis zur Manifestation schwerwiegender Folgen wie Schla ganfall, koronare Herzkrankheit oder periphere arterielle Verschlusskrankheit vergeht eine lange Zeit. Endothelschäden sind bei Patienten nach HCT gut dokumen tiert. Im Zusammenhang mit der allo-HCT wird die Endothelschädigung durch das Konditionierungsschema mit oder ohne TBI induziert. Darüber hinaus wurde dokumentiert, dass Endothelzellen ein Ziel der GvHD sind und dass eine erhöhte Konzentration zirkulierender Endothelzellen (engl: circulating endothelial cells; CEC) mit einem Anstieg der Anzahl zirkulierender alloreaktiver T-Zellen korreliert. Nach den ESC-Leitlinien 2021 zur Prävention von Herz-Kreislauf-Erkrankungen sind die wichtigsten Risikofaktoren für atherosklerotische Herz-Kreislauf-Erkrankungen (engl.: atherosclerotic cardiovascular disease; ASCVD) Apolipoprotein B (ApoB)-haltige Lipoproteine im Blut (von denen das Low-Density-Lipoprotein (LDL) am häufigsten vorkommt), Bluthochdruck, Zigarettenrauchen und Diabetes mellitus (DM). GvHD gilt als Hochrisikofaktor für das Auftreten von Dyslipidämie, Bluthochdruck und DM. Insgesamt ist das Risiko eines vorzeitigen kardiovaskulären Todes im Vergleich zur Allgemeinbevölkerung um das 2,7-fache erhöht, während die kumulative Inzidenz kardiovaskulärer Komp likationen zehn Jahre nach einer Konditionierung mit reduzierter Intensität (RIC) nach einer HCT bei bis zu 47% lag. Bislang gibt es jedoch keine Studien, die den Zusam menhang zwischen GvHD und Atherosklerose aufklären. Ziel dieser Studie war es daher, die Beteiligung der GvHD am Fortschreiten der Atherosklerose zu untersuchen und zu klären, ob zytotoxische CD8+ T-Zellen, die einerseits eine bedeutende Rolle bei der En dothelschädigung im Verlauf der Haut-GvHD spielen und andererseits die Bildung insta biler Plaques induzieren, an diesem Zusammenhang beteiligt sind. Zu diesem Zweck haben wir ein neuartiges miHAg-allo-HCT Atherosklerose-Mausmodell etabliert. Wir konnten zeigen, dass GvHD einen signifikanten Einfluss auf die Entwicklung von Atherosklerose in B6.Ldlr−/−-Empfängermäusen hat, selbst wenn keine klinische Krankheitsaktivität vor 3 Chapter 1. Summary liegt. Es scheint, dass dieser Einfluss zumindest teilweise durch CD8+ T-Zellen induziert wird, die bei Mäusen mit subklinischer GvHD eine signifikant erhöhte Infiltration von Aortenläsionen zeigten. Dies wurde auch in Studien in regulären Atherosklerose-Modellen sowie beim Menschen gezeigt. Diese CD8+-T-Zellen wiesen nicht nur eine erhöhte Expression von Genen auf, die an der Aktivierung, dem Überleben und der Differenzierung zum zytotoxischen Phänotyp beteiligt sind, sondern auch einige Gene, die auf zelluläre Erschöpfung hinweisen, die im CD4+-T-Zell-Cluster fehlten. Wurde ein Anti-CD8β-Antikörper einmal wöchentlich zusammen mit der Fütterung von WD acht Wochen lang verabreicht, so wurde die Plaquebildung in der Aorta und der Aortenwurzel signifikant reduziert, was auf die Bedeutung dieser Zellen bei der durch Alloreaktivität induzierten Läsionsbildung hinweist. Darüber hinaus führte eine Anti-CD8β-Behandlung zu einer signifikant verringerten Bildung eines nekrotischen Kerns, gefolgt von einer allge meinen Zunahme der Plaquestabilität. Auffallend ist, dass BMT-Empfänger, die mit WD gefüttert wurden, im Vergleich zu BM (einer Gruppe ohne alloreaktive T-Zellen, die GvHD induzieren) signifikant erhöhte Serumcholesterinwerte aufwiesen. Dieser Effekt kehrte sich um, wenn eine Anti-CD8β-Behandlung durchgeführt wurde, was zumindest teilweise auf einen Einfluss alloreaktiver CD8+-T-Zellen auf den Cholesterinspiegel schließen lässt. Die Expression von Genen, die für den Lipidstoffwechsel verantwortlich sind, wies auf die Tendenz der Leber hin, den erhöhten Cholesterinspiegel zu regulieren; der Mechanismus, der diesem Phänotyp zugrunde liegt, muss jedoch noch aufgeklärt werden. Andererseits hat sich gezeigt, dass die durch chronische Fütterung induzierte Fettleibigkeit ein un abhängiger Risikofaktor für gastrointestinale GvHD ist. In ähnlicher Weise haben wir in dem MHC disparaten allo-HCT-Mausmodell festgestellt, dass selbst eine kurzfristige WD-Zufuhr zu einer signifikanten Verringerung des Überlebens der Mäuse nach der HCT führte. Wenn die Konzentration der transplantierten alloreaktiven T-Zellen reduziert wurde, verbesserte sich die Überlebensrate, was auf die Beteiligung dieser Zellen an der Pathogenese hinweist. Darüber hinaus zeigte die Biolumineszenz-Bildgebung (engl.: bio luminiscence imaging; BLI) während der Initiations- und Effektorphase der aGvHD eine erhöhte Infiltration alloreaktiver T-Zellen bei Mäusen, die mit WD gefüttert wurden. Wie Studien gezeigt in einem Adipositasmodell vorgeschlagen haben, konnten wir die Beteili gung von spezifisch CD4+ T-Zellen an der WD-induzierten Wirkung bestätigen, da die relative Anzahl dieser Zellen im Dünndarm am sechsten Tag nach der HCT bei Mäusen, die mit WD gefüttert wurden, signifikant erhöht war. Dieser erhöhten Darminfiltration ging ein Anstieg der Zahl alloreaktiver T-Zellen voraus, die den Darm-Homing-Rezeptor (α4β7-Integrin) in den peripheren LNs exprimieren. Obwohl sich die Anzahl der T-Zellen in der Milz von mit WD gefütterten Mäusen nicht veränderte, war die Untergruppe der CD4+- und CD8+-T-Zellen, die in hohem Maße TNFα sezernierten, ebenso erhöht wie die Expression von Genen, die pro-inflammatorische Zytokine wie IL-6 und IFNγ reg ulieren, was auf eine signifikante WD-induzierte Entzündung hinweist. Darüber hinaus könnte die von uns beobachtete leichte Tendenz zu einer erhöhten intestinalen Perme abilität und Belastung mit translozierten luminalen Bakterien eine schwere Endotoxämie und eine dysregulierte systemische Immunantwort auslösen, die zu einer schädlichen In duktion des Zelltods führen könnte. Zur Untermauerung unserer Spekulationen stellten wir erhöhte Transaminasenwerte und einen Anstieg der LDH-Werte fest (was auf erhe bliche Gewebeschäden hinweist).Jedoch verbleibt der genaue Mechanismus, der zu den verheerenden Auswirkungen von WD führt, ungeklärt. KW - Periphere Stammzellentransplantation KW - Arteriosklerose KW - GvHD KW - HCT KW - Atherosclerosis Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-325792 ER - TY - THES A1 - Kreisz, Philipp T1 - Group S1 bZIP transcription factors regulate sink tissue development by controlling carbon and nitrogen resource allocation in \(Arabidopsis\) \(thaliana\) T1 - Gruppe S1 bZIP Transkriptionsfaktoren regulieren die Entwicklung von sink-Geweben durch Kontrolle der Verteilung von Kohlen- und Stickstoff Ressourcen in \(Arabidopsis\) \(thaliana\) N2 - The evolutionary success of higher plants is largely attributed to their tremendous developmental plasticity, which allows them to cope with adverse conditions. However, because these adaptations require investments of resources, they must be tightly regulated to avoid unfavourable trade-offs. Most of the resources required are macronutrients based on carbon and nitrogen. Limitations in the availability of these nutrients have major effects on gene expression, metabolism, and overall plant morphology. These changes are largely mediated by the highly conserved master kinase SNF1-RELATED PROTEIN KINASE1 (SnRK1), which represses growth and induces catabolic processes. Downstream of SnRK1, a hub of heterodimerising group C and S1 BASIC LEUCINE ZIPPER (bZIP) transcription factors has been identified. These bZIPs act as regulators of nutrient homeostasis and are highly expressed in strong sink tissues, such as flowers or the meristems that initiate lateral growth of both shoots and roots. However, their potential involvement in controlling developmental responses through their impact on resource allocation and usage has been largely neglected so far. Therefore, the objective of this work was to elucidate the impact of particularly S1 bZIPs on gene expression, metabolism, and plant development. Due to the high homology and suspected partial redundancy of S1 bZIPs, higher order loss-of-function mutants were generated using CRISPR-Cas9. The triple mutant bzip2/11/44 showed a variety of robust morphological changes but maintained an overall growth comparable to wildtype plants. In detail however, seedlings exhibited a strong reduction in primary root length. In addition, floral transition was delayed, and siliques and seeds were smaller, indicating a reduced supply of resources to the shoot and root apices. However, lateral root density and axillary shoot branching were increased, suggesting an increased ratio of lateral to apical growth in the mutant. The full group S1 knockout bzip1/2/11/44/53 showed similar phenotypes, albeit far more pronounced and accompanied by growth retardation. Metabolomic approaches revealed that these architectural changes were accompanied by reduced sugar levels in distal sink tissues such as flowers and roots. Sugar levels were also diminished in leaf apoplasts, indicating that long distance transport of sugars by apoplastic phloem loading was impaired in the mutants. In contrast, an increased sugar supply to the proximal axillary buds and elevated starch levels in the leaves were measured. In addition, free amino acid levels were increased in bzip2/11/44 and bzip1/2/11/44/53, especially for the important transport forms asparagine and glutamine. The increased C and N availability in the proximal tissues could be the cause of the increased axillary branching in the mutants. To identify bZIP target genes that might cause the observed shifts in metabolic status, RNAseq experiments were performed. Strikingly, clade III SUGARS WILL EVENTUALLY BE EXPORTED (SWEET) 8 genes were abundant among the differentially expressed genes. As SWEETs are crucial for sugar export to the apoplast and long-distance transport through the phloem, their reduced expression is likely to be the cause of the observed changes in sugar allocation. Similarly, the reduced expression of GLUTAMINE AMIDOTRANSFERASE 1_2.1 (GAT1_2.1), which exhibits glutaminase activity, could be an explanation for the abundance of glutamine in the mutants. Additional experiments (ATAC-seq, DAP� seq, PTA, q-RT-PCR) supported the direct induction of SWEETs and GAT1_2.1 by S1 bZIPs. To confirm the involvement of these target genes in the observed S1 bZIP mutant phenotypes, loss-of-function mutants were obtained, which showed moderately increased axillary branching. At the same time, the induced overexpression of bZIP11 in axillary meristems had the opposite effect. Collectively, a model is proposed for the function of S1 bZIPs in regulating sink tissue development. For efficient long-distance sugar transport, bZIPs may be required to induce the expression of clade III SWEETs. Thus, reduced SWEET expression in the S1 bZIP mutants would lead to a decrease in apoplastic sugar loading and a reduced supply to distal sinks such as shoot or root apices. The reduction in long� distance transport could lead to sugar accumulation in the leaves, which would then increasingly be transported via symplastic routes towards proximal sinks such as axillary branches and lateral roots or sequestered as starch. The reduced GAT1_2.1 levels lead to an abundance of glutamine, a major nitrogen transport form. The combined effect on C and N allocation results in increased nutrient availability in proximal tissues, promoting the formation of lateral plant organs. Alongside emerging evidence highlighting the power of bZIPs to steer nutrient allocation in other species, a novel but evolutionary conserved role for S1 bZIPs as regulators of developmental plasticity is proposed, while the generation of valuable data sets and novel genetic resources will help to gain a deeper understanding of the molecular mechanisms involved N2 - Der evolutionäre Erfolg höherer Pflanzen wird weitgehend auf ihre enorme Entwicklungsplastizität zurückgeführt, die es ihnen ermöglicht, widrigen Bedingungen zu trotzen. Da diese Anpassungen jedoch einen immensen Ressourceneinsatz erfordern, müssen sie streng reguliert werden, um unvorteilhafte Reaktionen zu vermeiden. Den Großteil der benötigten Ressourcen machen Makronährstoffe auf der Basis von Kohlenstoff und Stickstoff aus. Eine eingeschränkte Verfügbarkeit dieser Nährstoffe hat erhebliche Auswirkungen auf die Genexpression, den Stoffwechsel und die Morphologie der Pflanzen. Diese Veränderungen werden größtenteils durch die hochkonservierte Kinase SNF1-RELATED PROTEIN KINASE1 (SnRK1) vermittelt, die das Wachstum unterdrückt und katabole Prozesse einleitet. Downstream von SnRK1 wurde ein Netzwerk von heterodimerisierenden Transkriptionsfaktoren der Gruppe C und S1 BASIC LEUCINE ZIPPER (bZIP) identifiziert. Diese bZIPs wirken als Regulatoren der Nährstoffhomöostase und werden vor allem in starken sink-Geweben wie Blüten oder den Meristemen, die das Seitenwachstum von Sprossen und Wurzeln ermöglichen, exprimiert. Ihre potenzielle Beteiligung an der Steuerung von Entwicklungsreaktionen durch ihren Einfluss auf die Ressourcenzuteilung und -nutzung wurde bisher jedoch weitgehend vernachlässigt. Ziel dieser Arbeit war es daher, die Auswirkungen insbesondere von S1 bZIPs auf die Genexpression, den Stoffwechsel und die Pflanzenentwicklung zu erforschen. Aufgrund der hohen Homologie und der vermuteten teilweisen Redundanz der S1 bZIPs wurden mithilfe von CRISPR-Cas9 loss-of-function Mutanten höherer Ordnung erzeugt. Die Dreifachmutante bzip2/11/44 zeigte eine Vielzahl robuster morphologischer Veränderungen, behielt aber insgesamt ein mit Wildtyp-Pflanzen vergleichbares Wachstum bei. Im Detail jedoch wiesen die Keimlinge eine starke Verringerung der Primärwurzellänge auf. Darüber hinaus verzögerte sich der Blühzeitpunkt, und die Schoten und Samen waren kleiner, was auf eine geringere Versorgung der Spross- und Wurzelspitzen mit Ressourcen hinweist. Die Dichte der Seitenwurzeln und die axilläre Verzweigung des Sprosses waren jedoch erhöht, was auf ein erhöhtes Verhältnis von lateralem zu apikalem Wachstum in der Mutante hindeutet. Die Knockout-Mutante bzip1/2/11/44/53 zeigte ähnliche Phänotypen, wenn auch weitaus ausgeprägter und begleitet von Wachstumsverzögerungen. Metabolische Untersuchungen ergaben, dass diese Veränderungen in der Architektur mit reduzierten Zuckerspiegeln in distalen sink� Geweben wie Blüten und Wurzeln einhergingen. Die Zuckerspiegel waren auch in den Apoplasten der Blätter vermindert, was darauf hindeutet, dass der Ferntransport von Zucker durch apoplastische Phloembeladung in den Mutanten beeinträchtigt war. Im Gegensatz dazu wurden eine erhöhte Zuckerzufuhr zu den proximalen Achselknospen und erhöhte Stärkekonzentrationen in den Blättern gemessen. Zusätzlich war die Konzentration freier Aminosäuren in bzip2/11/44 und bzip1/2/11/44/53 10 erhöht, insbesondere für die wichtigen Transportformen Asparagin und Glutamin. Die erhöhte C- und N-Verfügbarkeit in den proximalen Geweben könnte die Ursache für die verstärkte axilläre Verzweigung in den Mutanten sein. Um bZIP-Zielgene zu identifizieren, die die beobachteten Verschiebungen im Stoffwechselstatus verursachen könnten, wurden RNAseq-Experimente durchgeführt. Auffallend ist, dass die Gene der Gruppe III SUGARS WILL EVENTUALLY BE EXPORTED (SWEET) unter den unterschiedlich exprimierten Genen sehr häufig vorkamen. Da SWEETs für den Zuckerexport in den Apoplasten und den Langstreckentransport durch das Phloem von entscheidender Bedeutung sind, ist ihre verringerte Expression wahrscheinlich die Ursache für die beobachteten Veränderungen in der Zuckerallokation. Ebenso könnte die verringerte Expression von GLUTAMIN AMIDOTRANSFERASE 1_2.1 (GAT1_2.1), die Glutaminase-Aktivität aufweist, eine Erklärung für die Häufigkeit von Glutamin in den Mutanten sein. Zusätzliche Experimente (ATAC-seq, DAP-seq, PTA, q-RT-PCR) bestätigten die direkte Induktion von SWEETs und GAT1_2.1 durch S1 bZIPs. Um die Beteiligung dieser Zielgene an den in den S1 bZIP� Mutanten beobachteten Phänotypen zu bestätigen, wurden loss-of-function-Mutanten untersucht, die eine mäßig erhöhte axilläre Verzweigung aufwiesen. Gleichzeitig hatte die induzierte Überexpression von bZIP11 in axillären Meristemen den gegenteiligen Effekt. Auf Basis dieser Ergebnisse wird ein Modell für die Funktion von S1 bZIPs bei der Regulierung der Entwicklung von sink-Geweben vorgeschlagen. Für einen effizienten Zuckertransport über große Entfernungen könnten bZIPs erforderlich sein, um die Expression von SWEETs der Gruppe III zu induzieren. Eine verringerte SWEET-Expression in den S1 bZIP-Mutanten würde zu einem Rückgang der apoplastischen Zuckerbeladung und einer verringerten Versorgung von distalen sink-Geweben wie den Spross- oder Wurzelspitzen führen. Die Verringerung des Ferntransports könnte zu einer Anhäufung von Zucker in den Blättern führen, der dann verstärkt über symplastische Wege zu proximalen sink� Geweben wie den axillären Meristem und Seitenwurzeln transportiert oder als Stärke gespeichert wird. Die verringerte GAT1_2.1 Expression führt zu einem Überfluss an Glutamin, einer wichtigen Stickstofftransportform. Die kombinierte Wirkung auf die C- und N-Allokation führt zu einer erhöhten Nährstoffverfügbarkeit in den proximalen Geweben und fördert die Bildung von seitlichen Pflanzenorganen. Neben neuen Erkenntnissen, die die Wirksamkeit von bZIPs bei der Steuerung der Nährstoffallokation in anderen Arten unterstreichen, wird eine neuartige, jedoch evolutionär konservierte Rolle für S1 bZIPs als Regulatoren der Entwicklungsplastizität vorgeschlagen, während die Generierung wertvoller Datensätze und neuer genetischer Ressourcen dazu beitragen wird, ein tieferes Verständnis der beteiligten molekularen Mechanismen zu gewinnen. KW - Molekularbiologie KW - Sugar allocation KW - Nitrogen allocation KW - Basic leucine zipper KW - Developmental plasticity KW - CRISPR Cas9 KW - Ackerschmalwand KW - CRISPR/Cas-Methode KW - Arabidopsis thaliana Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-321925 ER - TY - THES A1 - Kumar, Manish T1 - Structural and compositional effects on tree-water relation T1 - Strukturelle und Zusammenseztungseffekte auf die Beziehung zwischen Baum und Wasser N2 - Forests are essential sources of tangible and intangible benefits, but global climate change associated with recurrent extreme drought episodes severely affects forest productivity due to extensive tree die-back. On that, it appeals to an urgency for large-scale reforestation efforts to mitigate the impact of climate change worldwide; however, there is a lack of understanding of drought-effect on sapling growth and survival mechanisms. It is also challenging to anticipate how long trees can survive and when they succumb to drought. Hence, to ensure success of reforestation programs and sustainable forest productivity, it is essential to identify drought-resistant saplings. For that, profound knowledge of hydraulic characteristics is needed. To achieve this, the study was split into two phases which seek to address (1) how the hydraulic and anatomical traits influence the sapling’s growth rate under drought stress. (2) how plant water potential regulation and physiological traits are linked to species’ water use strategies and their drought tolerance. The dissertation is assembled of two study campaigns carried out on saplings at the Chair of Botany II, University of Würzburg, Germany. The first study involved three ecologically important temperate broadleaved tree species — saplings of 18-month (Acer pseudoplatanus, Betula pendula, and Sorbus aucuparia) — grown from seeds in contrasting conditions (inside a greenhouse and outside), with the latter being subjected to severe natural heat waves. In the second study, two additional temperate species (Fagus sylvatica and Tilia cordata) were added. The drying-out event was conducted using a randomised blocked design by monitoring plant water status in a climate-controlled chamber and a greenhouse. In campaign I, I present the result based on analysed data of 82 plants of temperate deciduous species and address the juvenile growth rate trade-off with xylem safety-efficiency. Our results indicate biomass production varies considerably due to the contrasted growing environment. High hydraulic efficiency is necessary for increased biomass production, while safety-efficiency traits are decoupled and species-specific. Furthermore, productivity was linked considerably to xylem safety without revealing a well-defined pattern among species. Moreover, plasticity in traits differed between stressed and non-stressed plants. For example, safety-related characteristics were more static than efficiency-related traits, which had higher intra-specific variation. Moreover, we recorded anatomical and leaf traits adjustments in response to a stress condition, but consistency among species is lacking. In campaign II, I combined different ways to estimate the degree of isohydry based on water potential regulation and connected the iso-anisohydric spectrum (i.e., hydroscape area, HSA) to hydraulic traits to elucidate actual plant performance during drought. We analysed plant water potential regulation (Ψpd and Ψmd) and stomatal conductance of 28-29 month saplings of five species. I used a linear mixed modelling approach that allowed to control individual variations to describe the water potential regulation and tested different conceptual definitions of isohydricity. The combined methods allowed us to estimate species' relative degree of isohydry. Further, we examined the traits coordination, including hydraulic safety margin, HSM; embolism resistance, P88; turgor loss, Ψtlp; stomata closure, Ps90; capacitance, C; cuticular conductance, gmin, to determine time to hydraulic failure (Thf). Thf is the cumulative effect of time to stomata closure (Tsc) and time after stomatal closure to catastrophic hydraulic failure (Tcrit). Our results show the species' HSA matches their stomatal stringency, which confirms the relationship between stomatal response and leaf water potential decline. Species that close stomata at lower water potential notably had a larger HSA. Isohydric behaviour was mostly associated with leaf hydraulic traits and poorly to xylem safety traits. Species' degree of isohydry was also unrelated to the species' time to death during drying-out experiments. This supports the notion that isohydry behaviours are linked to water use rather than drought survival strategies. Further, consistent with our assumptions, more isohydric species had larger internal water storage and lost their leaf turgor at less negative water potentials. Counter to our expectations, neither embolism resistance nor the associated hydraulic safety margins were related to metrics of isohydry. Instead, our results indicate traits associated with plant drought response to cluster along two largely independent axes of variation (i.e., stomatal stringency and xylem safety). Furthermore, on the temporal progression of plant drought responses, stomatal closure is critical in coordinating various traits to determine species' hydraulic strategies. Desiccation avoidance strategy was linked to Tsc and coordinated traits response of Ps90, Ψtlp, and HSA, whereas desiccation tolerance was related to Tcrit and traits such as lower P88 value, high HSM, and lower gmin. Notably, the shoot capacitance (C) is crucial in Thf and exhibits dichotomous behaviour linked to both Tsc and Tcrit. In conclusion, knowledge of growth rate trade-offs with xylem safety-efficiency combined with traits linked to species’ hydraulic strategies along the isohydry could substantially enhance our ability to identify drought-resistant saplings to ensure the success of reforestation programs and predicting sensitivity to drought for achieving sustainable forest ecosystems. N2 - Wälder sind wichtige Quellen materieller und immaterieller Vorteile, aber der globale Klimawandel, der mit wiederkehrenden extremen Dürreperioden einhergeht, beeinträchtigt die Produktivität der Wälder aufgrund des starken Absterbens von Bäumen erheblich. Deshalb werden dringend groß angelegte Aufforstungsmaßnahmen gefordert, um die Auswirkungen des Klimawandels weltweit abzumildern. Allerdings fehlt es an Kenntnissen über die Auswirkungen von Dürre auf das Wachstum und die Überlebensmechanismen von Jungbäumen. Es ist auch schwierig, vorherzusehen, wie lange Bäume überleben können und wann sie der Trockenheit erliegen. Um den Erfolg von Wiederaufforstungsprogrammen und die nachhaltige Produktivität der Wälder zu gewährleisten, ist es daher unerlässlich, trockenheitsresistente Setzlinge zu identifizieren. Dazu ist eine profunde Kenntnis der hydraulischen Eigenschaften erforderlich. Um dies zu erreichen, wurde die Studie in zwei Phasen aufgeteilt, in denen untersucht werden soll, (1) wie die hydraulischen und anatomischen Merkmale die Wachstumsrate der Setzlinge unter Trockenstress beeinflussen. (2) wie die Regulierung des pflanzlichen Wasserpotenzials und die physiologischen Merkmale mit den Wassernutzungsstrategien der Arten und ihrer Trockentoleranz zusammenhängen. Die Dissertation setzt sich aus zwei Studienkampagnen zusammen, die am Lehrstuhl für Botanik II der Universität Würzburg an Setzlingen durchgeführt wurden. In der ersten Studie wurden drei ökologisch wichtige Laubbaumarten der gemäßigten Zonen - 18-monatige Setzlinge (Acer pseudoplatanus, Betula pendula und Sorbus aucuparia) - aus Samen unter unterschiedlichen Bedingungen (in einem Gewächshaus und im Freien) aufgezogen, wobei letztere schweren natürlichen Hitzewellen ausgesetzt waren. In der zweiten Studie wurden zwei weitere gemäßigte Arten (Fagus sylvatica und Tilia cordata) hinzugefügt. Der Austrocknungsversuch wurde in einem randomisierten Blockdesign durchgeführt, bei dem der Wasserhaushalt der Pflanzen in einer klimatisierten Kammer und einem Gewächshaus überwacht wurde. In Kampagne I präsentiere ich die Ergebnisse, die auf den analysierten Daten von 82 Pflanzen gemäßigter Laubbaumarten basieren, und gehe auf den Kompromiss zwischen der Wachstumsrate von Jungpflanzen und der Sicherheitseffizienz des Xylems ein. Unsere Ergebnisse zeigen, dass die Biomasseproduktion aufgrund der unterschiedlichen Wachstumsbedingungen stark variiert. Eine hohe hydraulische Effizienz ist für eine erhöhte Biomasseproduktion notwendig, während die Sicherheitseffizienz entkoppelt und artspezifisch ist. Darüber hinaus war die Produktivität in erheblichem Maße mit der Xylemsicherheit verknüpft, ohne dass sich ein klar definiertes Muster zwischen den Arten ergab. Darüber hinaus war die Plastizität der Merkmale zwischen gestressten und nicht gestressten Pflanzen unterschiedlich. So waren beispielsweise sicherheitsbezogene Merkmale statischer als effizienzbezogene Merkmale, die eine stärkere intra-spezifische Variation aufwiesen. Darüber hinaus haben wir Anpassungen der anatomischen Merkmale und der Blatteigenschaften als Reaktion auf eine Stressbedingung festgestellt, aber es fehlt die Konsistenz zwischen den Arten. In Kampagne II kombinierte ich verschiedene Methoden zur Schätzung des Isohydrierungsgrads auf der Grundlage der Wasserpotenzialregulierung und verknüpfte das iso-anisohydrische Spektrum (d. h. die Hydroscape-Fläche, HSA) mit hydraulischen Merkmalen, um die tatsächliche Leistung der Pflanzen bei Trockenheit zu ermitteln. Wir analysierten die Regulierung des pflanzlichen Wasserpotenzials (Ψpd und Ψmd) und die stomatäre Leitfähigkeit von 28-29 Monate alten Setzlingen von fünf Arten. Ich verwendete einen linearen gemischten Modellierungsansatz, der die Kontrolle individueller Variationen zur Beschreibung der Wasserpotenzialregulierung ermöglichte, und testete verschiedene konzeptionelle Definitionen der Isohydrizität. Die kombinierten Methoden ermöglichten es uns, den relativen Grad der Isohydrizität der Arten zu schätzen. Darüber hinaus untersuchten wir die Koordination der Merkmale, einschließlich der hydraulischen Sicherheitsspanne (HSM), des Embolieresistenz (P88), des Turgorverlustes (Ψtlp), des Spaltöffnungsgrades (Ps90), der Kapazität (C) und des kutikulären Leitwertes (gmin), um die Zeit bis zum hydraulischen Versagen (Thf) zu bestimmen. Thf ist der kumulative Effekt der Zeit bis zum Schließen der Spaltöffnungen (Tsc) und der Zeit nach dem Schließen der Spaltöffnungen bis zum katastrophalen hydraulischen Versagen (Tcrit). Unsere Ergebnisse zeigen, dass die HSA der Arten mit ihrer Spaltöffnungsintensität übereinstimmt, was die Beziehung zwischen der Spaltöffnungsreaktion und dem Rückgang des Wasserpotenzials der Blätter bestätigt. Arten, die ihre Spaltöffnungen bei einem niedrigeren Wasserpotenzial schließen, hatten einen deutlich größeren HSA. Das isohydrische Verhalten stand hauptsächlich mit den hydraulischen Eigenschaften der Blätter in Verbindung und kaum mit den Sicherheitsmerkmalen des Xylems. Der Grad der Isohydrierung der Arten stand auch in keinem Zusammenhang mit der Zeit bis zum Absterben der Arten während der Austrocknungsversuche. Dies unterstützt die Annahme, dass das Isohydrie-Verhalten eher mit der Wassernutzung als mit Überlebensstrategien bei Trockenheit zusammenhängt. Darüber hinaus wiesen isohydrische Arten, wie von uns angenommen, einen größeren internen Wasserspeicher auf und verloren ihren Blattturgor bei weniger negativen Wasserpotentialen. Entgegen unseren Erwartungen standen weder die Embolieresistenz noch die damit verbundenen hydraulischen Sicherheitsspannen in Zusammenhang mit Isohydratisierungsmerkmalen. Stattdessen deuten unsere Ergebnisse darauf hin, dass sich die Merkmale, die mit der Reaktion der Pflanzen auf Trockenheit in Verbindung stehen, entlang zweier weitgehend unabhängiger Variationsachsen (d. h. stomatäre Strenge und Xylem-Sicherheit) gruppieren. Was den zeitlichen Verlauf der pflanzlichen Reaktionen auf Trockenheit betrifft, so ist der Stomataverschluss für die Koordinierung der verschiedenen Merkmale entscheidend, um die hydraulischen Strategien der Arten zu bestimmen. Die Strategie zur Vermeidung von Austrocknung war mit Tsc und koordinierten Merkmalen wie Ps90, Ψtlp und HSA verbunden, während die Austrocknungstoleranz mit Tcrit und Merkmalen wie einem niedrigeren P88-Wert, einem hohen HSM und einem niedrigeren gmin zusammenhing. Insbesondere die Sprosskapazität (C) ist für Thf entscheidend und zeigt ein dichotomes Verhalten, das sowohl mit Tsc als auch mit Tcrit zusammenhängt. Zusammenfassend lässt sich sagen, dass das Wissen um die Wechselwirkungen zwischen der Wachstumsrate und der Sicherheitseffizienz des Xylems in Verbindung mit Merkmalen, die mit den hydraulischen Strategien der Arten entlang der Isohydrie zusammenhängen, unsere Fähigkeit, trockenheitsresistente Setzlinge zu identifizieren, erheblich verbessern könnte, um den Erfolg von Aufforstungsprogrammen zu gewährleisten und die Empfindlichkeit gegenüber Trockenheit vorherzusagen, um nachhaltige Waldökosysteme zu erreichen. KW - Wachstumsrate KW - hydraulic efficiency KW - phenotypic plasticity KW - growth rate KW - safety-efficiency trade-off KW - vulnerability curve KW - stomatal closure KW - desiccation time KW - hydroscape KW - cuticular conductance KW - shoot capacitance KW - Baum KW - Wasser KW - hydraulische Effizienz KW - Verwundbarkeitskurve KW - Stomatenverschluss KW - Hydroscape-Gebiet Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-326245 ER - TY - THES A1 - Franken, Robert T1 - Precision Predictions for \(\mathrm W^+ \mathrm W^-\) Scattering at the LHC T1 - Präzisionsvorhersagen für \(\mathrm W^+ \mathrm W^-\) -Streuung am LHC N2 - In this thesis we examine the vector boson scattering (VBS) process \(\mathrm p \mathrm p \to \mathrm e^+ \nu_\mathrm e\mu^-\bar\nu_\mu\mathrm j\mathrm j +X\) (short: \(\mathrm W^+\mathrm W^-\) scattering) at NLO accuracy in two experimental setups by performing a Monte Carlo analysis of a \(13\,\mathrm{TeV}\) LHC run. \(\mathrm W^+\mathrm W^-\) scattering shows similarities and differences compared to the scattering of other vector bosons. We present a detailed description of the types of appearing subprocesses and background processes. We give insight into our code which solves the problems we are faced within \(\mathrm W^+\mathrm W^-\) scattering. This is especially the presence of the Higgs-boson resonance in the fiducial phase-space region. Particular attention is dedicated to the permutation of resonances. The integrated signal cross section at LO \(\mathcal O(\alpha^6)\) amounts to \(2.6988(3)\,\mathrm{fb}\) and \(1.5322(2)\,\mathrm{fb}\), respectively, in the two experimental setups. The LO QCD-induced background of \(\mathcal O(\alpha_\mathrm s^2\alpha^4)\) amounts to \(6.9115(9)\,\mathrm{fb}\) and \(1.6923(3)\,\mathrm{fb}\). The EW corrections to the signal are \(-11.4\%\) and \(-6.7\%\), the QCD corrections amount to \(-5.2\%\) and \(-23.0\%\). The EW corrections to the background are \(-8.3\%\) and \(-5.3\%\), the QCD corrections amount to \(-30.3\%\) and \(-77.6\%\). Our results for the QCD corrections and the QCD-induced background include a large uncertainty from varying the renormalisation and factorisation scale, and we discuss improvements for future calculations. We show the differential cross sections with unique features of \(\mathrm W^+\mathrm W^-\) scattering compared to other VBS processes and investigate in particular the subprocess of Higgs-boson production by using a modified version of our setups. N2 - In dieser Arbeit untersuchen wir den Vektorboson-Streuprozess (VBS-Prozess) \(\mathrm p\mathrm p \to \mathrm e^+\nu_\mathrm e\mu^-\bar\nu_\mu\mathrm j\mathrm j + X\) (kurz: \(\mathrm W^+\mathrm W^-\)-Streuung) auf nächstführender Ordnung in zwei Versuchsanordnungen, indem wir eine Monte-Carlo-Analyse des LHC-Betriebs bei \(13\,\mathrm{TeV}\) durchführen. \(\mathrm W^+\mathrm W^-\)-Streuung zeigt Gemeinsamkeiten mit der und Unterschiede zur Streuung anderer Vektorbosonen. Wir stellen eine detaillierte Beschreibung der Arten auftauchender Subprozesse und Hintergrundprozesse vor und geben Einsicht in unseren Code, der die Probleme löst, vor die wir im Rahmen der \(\mathrm W^+\mathrm W^-\)-Streuung gestellt wurden. Dies ist insbesondere die Präsenz der Higgs-Boson-Resonanz im Bezugsphasenraum. Besonderes Augenmerk wird auf die Permutation der Resonanzen gelegt. Wir präsentieren den integrierten Wirkungsquerschnitt. Der integrierte Wirkungsquerschnitt des Signals beträgt \(2{,}6988(3)\,\mathrm{fb}\) beziehungsweise \(1{,}5322(2)\,\mathrm{fb}\) auf führender Ordnung \(\mathcal O(\alpha^6)\) in den beiden experimentellen Setups. Der QCD-Hintergrund auf führender Ordnung \(\mathcal O(\alpha_\mathrm s^2\alpha^4)\) beträgt \(6{,}9115(9)\,\mathrm{fb}\) bzw. \(1{,}6923(3)\,\mathrm{fb}\). Die elektroschwachen Korrekturen zum Signal belaufen sich auf \(-11{,}4\%\) bzw. \(-6{,}7\%\), die QCD-Korrekturen auf \(-5{,}2\%\) bzw. \(-23{,}0\%\). Die elektroschwachen Korrekturen zum Hintergrund sind \(-8{,}3\%\) bzw. \(-5{,}3\%\), die QCD-Korrekturen \(-30{,}3\%\) bzw. \(-77{,}6\%\). Unsere Ergebnisse für die QCD-Korrekturen und den QCD-induzierten Hintergrund enthalten eine große Unsicherheit durch die Variation der Renormierungs- und Faktorisierungsskala und wir diskutieren Verbesserungen für zukünftige Rechnungen. Wir zeigen die differentiellen Wirkungsquerschnitte mit Eigenheiten von \(\mathrm W^+\mathrm W^-\)-Streuung verglichen mit anderen VBS-Prozessen und betrachten insbesondere den Subprozess der Higgs-Boson-Produktion, indem wir eine modifizierte Version unserer Versuchsanordnungen verwenden. KW - W-Boson KW - Streuquerschnitt KW - LHC KW - Präzisionsvorhersage Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369445 ER - TY - THES A1 - Fohmann, Ingo T1 - The Role of Sphingosine 1-phosphate and S1PR1-3 in the Pathophysiology of Meningococcal Meningitis T1 - Die Rolle von Sphingosin 1-Phosphat und S1PR1-3 in der Pathophysiologie der durch Meningokokken ausgelösten Meningitis N2 - Neisseria meningitidis (N. meningitidis) is an obligate human pathogen which causes live-threatening sepsis and meningitis. The fatality rate after meningococcal infection is high and surviving patients often suffer from severe sequelae. To cause meningitis, N. meningitidis must overcome the endothelium of the blood-brain barrier. The bacterium achieves this through the interaction with endothelial surface receptors leading to alternations of the cellular metabolism and signaling, which lastly results in cellular uptake and barrier traversal of N. meningitidis. Sphingosine 1-phosphate (S1P) is a lipid mediator that belongs to the class of sphingolipids and regulates the integrity of the blood-brain barrier through the interaction with its cognate receptors S1P receptors 1-3 (S1PR1-3). In this study, high performance liquid chromatography coupled with mass spectrometry (LC-MS/MS) was used to generate a time-resolved picture of the sphingolipid metabolism in a brain endothelial cell line (hCMEC/D3) upon meningococcal infection. Among various changes, S1P was elevated in the cellular compartment as well as in the supernatant of infected hCMEC/D3s. Analysis of mRNA expression in infected hCMEC/D3s with quantitative real-time polymerase chain reaction (RT-qPCR) revealed that the increase in S1P could be attributed to the enhanced expression of the S1P-generating enzyme sphingosine kinase 1 (SphK1). Antibody-based detection of SphK1 protein or phosphorylation at SphK1 residue Serine 225 in hCMEC/D3 plasma membrane fractions via Western Blot revealed that N. meningitidis also induced SphK1 phospho-activation and recruitment to the plasma membrane. Importantly, recruitment of SphK1 to the plasma membrane increases the probability of substrate encounter, thus elevating SphK activity. Enhanced SphK activity was also reflected on a functional level, as detected by a commercially available ATP depletion assay used for measuring the enzymatic activity of SphK. Infection of hCMEC/D3 cells with pilus-deficient mutants resulted in a lower SphK activation compared to the N. meningitidis wild type strain. hCMEC/D3 treatment with pilus-enriched protein fractions showed SphK activation similar to the infection with living bacteria and could be ascribed to pilus interaction with the membrane-proximal domain of cellular surface receptor CD147. Inhibition of SphK1 or SphK2 through pre-treatment with specific inhibitors or RNA interference reduced uptake of N. meningitidis into hCMEC/D3 cells, as measured with Gentamicin protection assays. Released S1P induced the phospho-activation of epidermal growth factor receptor (EGFR) via S1PR2 activation, whose expression was also increasing during infection. Furthermore, S1PR2 blockage had a preventive effect on bacterial invasion into hCMEC/D3 cells. On the contrary, activation of S1PR1+3 also reduced bacterial uptake, indicating an opposing regulatory role of S1PR1+3 and S1PR2 during N. meningitidis uptake. Moreover, SphK2 inhibition prevented inflammatory cytokine expression as well as release of interleukin-8 after N. meningitidis infection. Taken together, this study demonstrates the central role of S1P and its cognate receptors S1PR1-3 in the pathophysiology of meningococcal meningitis. N2 - Neisseria meningitidis (N. meningitidis) ist ein obligat humanpathogenes Bakterium, welches lebensbedrohliche Sepsis und Meningitis auslöst. Die Todesrate nach einer Meningokokkeninfektion ist hoch und überlebende Patienten leiden oft unter gravierenden Folgeschäden. N. meningitidis muss zuerst das Endothel der Blut-Hirn-Schranke überwinden, um Meningitis auslösen zu können. Das Bakterium erzielt dies durch die Interaktion mit endothelialen Rezeptoren, welche den zellulären Metabolismus und die zellulären Signalwege beeinflusst und letztlich zur zellulären Aufnahme von N. meningitidis und zur Überwindung der Barriere führt. Sphingosine 1-phosphat (S1P) ist ein Lipidmediator, der zur Klasse der Sphingolipide gehört und die Integrität der Blut-Hirn-Schranke durch die Interaktion mit den zugehörigen S1P Rezeptoren 1-3 (S1PR1-3s) beeinflusst. In dieser Arbeit wurde Hochleistungsflüssigkeitschromatographie-gekoppelte Massenspektrometrie (LC-MS/MS) genutzt, um ein zeitlich aufgelöstes Bild des Sphingolipidmetabolismus in einer Hinendothelzelllinie (hCMEC/D3) nach Meningokokkeninfektion zu generieren. Neben zahlreichen Veränderungen zeigte sich ein Anstieg von S1P im zellulären Kompartiment und im Überstand von infizierten hCMEC/D3 Zellen. Die Analyse der mRNA Expression in infizierten hCMEC/D3 Zellen mittels quantitativer Echtzeit-Polymerase-Kettenreaktion (RT-qPCR) offenbarte, dass der Anstieg von S1P auf eine erhöhte Expression der S1P-bildenden Sphingosinkinase 1 (SphK1) zurückzuführen war. Die ntikörperbasierte Detektion des Proteins SphK1 oder dessen Phosphorylierung an Serin 225 in den Membranfraktionen von hCMEC/D3 Zellen mittels Western Blot zeigte, dass N. meningitidis außerdem die Phospho-Aktivierung und Membrantranslokation von SphK1 induzierte. Die Plasmamembrantranslokation von SphK1 erhöht die Wahrscheinlichkeit auf das Substrat Sphingosine zu treffen und verstärkt somit die SphK-Aktivität. Die erhöhte SphK-Aktivität zeigte sich auch auf funktioneller Ebene, wie mittels eines ATP-Verbrauchs-Assays zur Messung der SphK-Aktivität nachgewiesen werden konnte. Die Infektion von hCMEC/D3 Zellen mit Pilus-defizienten Mutanten resultierte in einer geringeren SphK-Aktivierung im Vergleich zum Wildtypstamm. Die Behandlung von hCMEC/D3 Zellen mit Pilus-aufgereinigten Fraktionen zeigte eine SphK-Aktivierung, die mit der Aktivierung durch lebende Bakterien vergleichbar war und der Interaktion des Pilus mit der membranproximalen Domäne des zellulären Oberflächenrezeptors CD147 zugeordnet werden konnte. Die Inhibition von SphK1 und SphK2 durch die Vorbehandlung mit spezifischen Inhibitoren oder RNA-Interferenz reduzierte die Aufnahme von N. meningitidis in hCMEC/D3 Zellen, wie mittels Gentamicin Protection Assay nachgewiesen wurde. Das freigesetzte S1P induzierte die Phospho-Aktivierung des epidermalen Wachstumsfaktorrezeptors (EGFR) durch die Aktivierung von S1PR2, welcher während der Infektion vermehrt exprimiert wurde. Die Blockierung von S1PR2 hatte einen präventiven Effekt auf die bakterielle Invasion in hCMEC/D3 Zellen. Im Gegenzug reduzierte die Aktivierung von S1PR1+3 ebenfalls die bakterielle Aufnahme, was auf eine gegensätzliche regulatorische Rolle von S1PR1+3 und S1PR2 während der Aufnahme von N. meningitidis in hCMEC/D3 Zellen hindeutet. Darüber hinaus verhinderte die Inhibition von SphK2 die Expression von inflammatorischen Cytokinen sowie die Freisetzung von Interleukin-8 nach Infektion mit N. meningitidis. Zusammenfassend zeigt diese Arbeit die zentrale Rolle von S1P und den zugehörigen Rezeptoren S1PR1-3 in der Pathophysiologie der durch Meningokokken ausgelösten Meningitis. KW - Blut-Hirn-Schranke KW - Sphingosinkinase KW - Sphingolipide KW - Bakterielle Infektion KW - Sphingosine 1-phosphate KW - Sphingosine 1-phosphate receptor KW - Epidermal growth factor receptor KW - CD147 KW - S1P KW - S1PR KW - Meningococci KW - Basigin KW - EGFR KW - Meningitis cerebrospinalis epidemica KW - Meningitis, Meningococcal Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369764 ER - TY - THES A1 - Baumann, Johannes T1 - Induced Superconductivity in HgTe Quantum Point Contacts T1 - Induzierte Supraleitung in Quecksilbertellurid Quantenpunktkontakten N2 - In this thesis, the Josephson effect in mercury telluride based superconducting quantum point contacts (SQPCs) is studied. Implementing such confined structures into topological superconductors has been proposed as a means to detect and braid Majorana fermions. For the successful realization of such experiments though, coherent transport across the constriction is essential. By demonstrating the Josephson effect in a confined topological system, the presented experiments lay the foundation for future quantum devices that can be used for quantum computation. In addition, the experiments also provide valuable insights into the behavior of the Josephson effect in the low-channel limit (N<20). Due to the confinement of the weak link, we can also study the Josephson effect in a topological insulator, where the edge modes interact. In conclusion, this thesis discusses the fabrication of, and low-temperature measurements on mercury telluride quantum point contacts embedded within Josephson junctions. We find that the merging of the currently used fabrication methods for mercury telluride quantum point contacts and Josephson junctions does not yield a good enough device quality to resolve subbands of the quantum point contact as quantization effects in the transport properties. As we attribute this to the long dry etching time that is necessary for a top-contact, the fabrication process was adapted to reduce the defect density at the superconductor-semiconductor interface. Employing a technique that involves side contacting the mercury telluride quantum well and reducing the size of the mercury telluride mesa to sub-micrometer dimensions yields a quantized supercurrent across the junction. The observed supercurrent per mode is in good agreement with theoretical predictions for ballistic, one-dimensional modes that are longer than the Josephson penetration depth. Moreover, we find that oscillatory features superimpose the plateaus of the supercurrent and the conductance. The strength of these oscillatory features are sample-dependent and complicate the identification of plateaus. We suggest that the oscillatory features originate mainly from local defects and the short gate electrode. Additionally, resonances are promoted within the weak link if the transparency of the superconductor-HgTe interface differs from one. Furthermore, the research explores the regimes of the quantum spin Hall effect and the 0.5 anomaly. Notably, a small yet finite supercurrent is detected in the QSH regime. In samples fabricated from thick mercury telluride quantum wells, the supercurrent appears to vanish when the quantum point contact is tuned into the regime of the 0.5 anomaly. For samples fabricated from thin mercury telluride quantum wells, the conductance as well as the supercurrent vanish for strong depopulation. In these samples though, the supercurrent remains detectable even for conductance values significantly below 2 e²/h. Numerical calculation reproduce the transport behavior of the superconducting quantum point contacts. Additionally, the topological nature of the weak link is thoroughly investigated using the supercurrent diffraction pattern and the absorption of radio frequency photons. The diffraction pattern reveals a gate independent, monotonous decay of $I_\text{sw}(B)$, which is associated with the quantum interference of Andreev bound states funneled through the quantum point contact. Interestingly, the current distribution in the weak link appears unaffected as the quantum point contact is depleted. In the RF measurements, indications of a 4π periodic supercurrent are observed as a suppression of odd Shapiro steps. The ratio of the 4π periodic current to the 2π periodic current appears to decrease for smaller supercurrents, as odd Shapiro steps are exclusively suppressed for large supercurrents. Additionally, considering the observation that the supercurrent is small when the bulk modes in the quantum point contact are fully depleted, we suggest that the re-emerging of odd Shapiro steps is a consequence of the group velocity of the edge modes being significantly suppressed when the bulk modes are absent. Consequently, the topological nature of the superconducting quantum point contact is only noticeable in the transport properties when bulk modes are transmitted through the superconducting quantum point contact. The shown experiments are the first demonstration of mercury telluride superconducting quantum point contacts that exhibit signatures of quantization effects in the conductance as well as the supercurrent. Moreover, the experiments suggest that the regime of interacting topological edge channels is also accessible in mercury telluride superconducting quantum point contacts. This is potentially relevant for the realization of Majorana fermions and their application in the field of quantum computation. N2 - Gegenstand dieser Arbeit ist der Josephson-Effekt in supraleitenden Quantenpunktkontakten (SQPCs) aus Quecksilbertellurid. Grundsätzlich wurde postuliert, dass räumlich eingeschränkte topologische Supraleitung in Quantenpunktkontakten verwendet werden kann, um Majorana-Fermionen zu realisieren und zu manipulieren. Dafür ist allerdings kohärente Supraleitung durch die Verjüngung des Quantenpunktkontaktes unerlässlich. Dies wird durch die Beobachtung des Josephson-Effektes durch den Quecksilbertellurid-Quantenpunktkontakt demonstriert. Somit legen die präsentierten Experimente den Grundstein für zukünftige Quanten-Bauelemente mit Anwendung im Bereich des Quantencomputings. Darüber hinaus liefern die Experimente auch einen Einblick in das Verhalten eines Josephson-Kontaktes, wenn dessen Verbindungsstück nur eine kleinen Anzahl an Transportmoden befördern kann (N<20). Durch die räumliche Nähe der Randkanäle des zwei-dimensionalen topologischen Isolators in der Verjüngung wird außerdem untersucht, wie sich der Josephson-Effekt unter Interaktion der helikalen Randkanäle verhält. Grundsätzlich behandelt diese Arbeit die Herstellung und Vermessung von supraleitenden Quecksilbertellurid-Quantenpunktkontakten, welche in einen Josephson-Kontakt eingebettet sind. Zunächst wird gezeigt, dass bei dem Versuch einen supraleitenden Quecksilbertellurid-Quantenpunktkontakt durch Anwenden der bekannten Fabrikationsprozesse von Quecksilbertellurid-Quantenpunktkontakten und Josephson-Kontakten herzustellen, die Qualität der Probe nicht gut genug ist, um quantisierten Transport durch einzelne Subbänder des Quantenpunktkontaktes aufzuweisen. Dies wird auf das lange Trockenätzen zurückgeführt, welche für einen Kontakt von oben notwendig ist. Daher wurde der Strukturierungsprozess angepasst, um die Defektdichte an dem Supraleiter-Halbleiter-Kontakt zu verringern. Durch das seitliche Kontaktieren des Quecksilbertellurid-Quantentroges und die Verkleinerung der Mesa auf submikrometer Größe, wird ein quantisierter Suprastrom durch den Josepshon-Kontakt beobachtet. Hierbei stimmt der von den Transportmoden getragene Suptrastrom gut mit den theoretischen Vorhersagen für ballistische, eindimensionale Moden überein, wenn deren Modenlänge größer als die Josephson-Eindringtiefe ist. Darüber hinaus wird beobachtet, dass die Stufen im Suprastrom und im Leitwert von Oszillationen überlagert werden. Die Stärke der Oszillationen ist hierbei probenabhängig, was die Identifikation einzelner Stufen erschwert. Die Oszillationen sind auf lokale Defekte und die kurze Gateelektrode zurückzuführen. Zusätzlich entstehen Resonanzen im Verbindungsstück des Josephson-Kontaktes, wenn die Transparenz der Supraleiter-HgTe-Kontaktes von eins abweicht. Des Weiteren werden die Bereiche des Quanten-Spin-Hall-Effektes und der 0.5-Anomalie untersucht. Bemerkenswerterweise wird im Quanten-Spin-Hall-Regime ein kleiner, aber endlicher Suprastrom detektiert. In Proben aus dicken Quecksilbertellurid-Quantentrögen verschwindet der Suprastrom, wenn der Quantenpunktkontakt in das Regime der 0.5-Anomalie gebracht wird. Bei dünnen Quecksilbertellurid-Quantentrögen verschwinden sowohl Leitwert als auch Suprastrom, wenn die Ladungsträgerdichte über das Quanten-Spin-Hall-Regime hinaus verringert wird. In diesen Proben bleibt allerdings der Suprastrom selbst für Leitwerte, die deutlich unter G=2 e²/h liegen, eindeutig erhalten. Das Transportverhalten der supraleitenden Quantenpunktkontakte wird durch numerische Simulationen reproduziert. Letztendlich werden die topologischen Eigenschaften des Verbindungsstückes auch durch das Beugungsbild des Suprastromes und durch die Absorption von RF-Photonen untersucht. Das Beugungsbild des Suprastromes zeigt einen monotonen Abfall von ebendiesem bei ansteigendem Magnetfeld, welcher unabhängig von der angelegten Gatespannung ist. Dieses Verhalten basiert auf Interferenzeffekten von gebundenen Andreev-Zuständen, welche die Verjüngung passieren. Interessanterweise scheint die Stromverteilung in dem Verbindungsstück unverändert zu bleiben, wenn der Quantenpunktkontakt entleert wird. In den RF-Messungen wird mit der Unterdrückung von ungeraden Shapiro-Stufen ein Anzeichen für einen 4\π-periodischen Suprastroms beobachtet. Das Verhältnis des 4π-periodischen Anteils des Suprastroms zum 2π-periodischen Anteil des Suprastroms wird kleiner, wenn der gesamte Suprastrom verringert wird. Demnach sind ungerade Shapiro-Stufen nur für große Supraströme unterdrückt. Wenn man darüber hinaus berücksichtigt, dass der Suprastrom klein ist, wenn die Volumenzustände im Quantenpunktkontakt entleert sind, liegt es nahe, dass das Wiederauftreten der ungeraden Shapiro-Stufen eine Konsequenz daraus ist, dass die Gruppengeschwindigkeit der helikalen Randkanäle unter Abwesenheit von Volumenzuständen deutlich verringert ist. Demzufolge sind die topologischen Eigenschaften des Verbindungsstückes nur bemerkbar, wenn auch Volumenzustände die Verjüngung passieren. Die gezeigten Experimente sind der erste Nachweis von supraleitenden Quantenpunktkontakten im zwei-dimensionalen topologischen Isolator Quecksilbertellurid, welche Kennzeichen von Quantisierungseffekte sowohl im Leitwert als auch im Suprastrom aufzeigen. Darüber hinaus implizieren die Experimente, dass der Bereich von interagierenden topologischen Randkanälen auch in supraleitenden Quecksilbertellurid-Quantenpunktkontakten zugänglich ist. Dies hat potenziell Relevanz für die Realisierung von Majorana-Fermionen in vergleichbaren Systemen und deren Anwendung im Bereich des Quantencomputing. KW - Topologischer Isolator KW - Supraleitung KW - Quecksilbertellurid KW - Niederdimensionaler Halbleiter KW - Topologische Supraleitung KW - Topological superconductivity KW - HgTe Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369405 ER - TY - THES A1 - Gamboa Vargas, Juan Fernando T1 - Receptors of the TNFSF in the biology and regulation of Tregs T1 - Rezeptoren der TNFSF in der Biologie und Regulation von regulatorischen T-Zellen N2 - In this work we expanded upon a study from our group where a ligand-based TNF-α mutein was developed to engage specifically TNFR2 and not TNFR1 activating Tregs and expanding them, which in an allo-HCT context conferred protection from GvHD. Fusing TNF trimers to the heavy chain of an Fc-dead and mouse irrelevant antibody, a new generation of this agonist was developed called NewSTAR2. It is believed that other members of the TNFSF can also target Tregs, therefore additional agonists against DR3 and GITR were developed under the same principles as for NewSTAR2. Phenotyping analysis of the expression of these three receptors were done to confirm their specificity for Tregs before in vitro and in vivo testings with mice or murine splenic cells. A potent expansion of Tregs was seen with NewSTAR2 and the other agonists as well as upregulation of activation markers on Tregs. Thorough analyses with NewSTAR2-treated mice showed how Tregs in several immune and non-immune organs were expanded and upregulated immunomodulatory receptors. A miniature suppressive assay and other cocultures with responder cells confirmed their enhanced suppression over unstimulated Tregs through contact dependent and independent mechanisms. Despite other myeloid cells also being increased after treatment, no undesired effects were observed under steady-state and prophylactic administration of a single dose of NewSTAR2 improved survival frequencies and lessened development of clinical symptoms. Prophylactic treatment with the other TNFRSF agonists showed similar protection yet Fc(DANA)-muTL1A was superior in in terms of less death events and lower clinical score. It was found that not all the three TNFSF members have redundant functions as development of skin lesions was observed with GITRL-based agonist Fc(DANA)-muGITRL, although its expansion of Tregs in steady-state was remarkable with no apparent adverse effects. Neither agonist had an impact on donor cell engraftment or allorective T cell response, however NewSTAR2-treatmend proved to reduce inflammation in small intestine and liver. This work is proof of concept of the effectivity of selectively engaging TNFSF to activate Tregs and expand them systemically allowing them to control strong and complex immune interactions like those governing GvHD. N2 - In dieser Arbeit erweiterten wir eine Studie unserer Gruppe, in der ein ligandenbasiertes TNF-α-Mutein entwickelt wurde, um spezifisch TNFR2 und nicht TNFR1 zu aktivieren und Tregs zu erweitern, was in einem allo-HCT-Kontext Schutz vor GvHD verlieh. Durch die Fusion von TNF-Trimeren mit der schweren Kette eines Fc-toten und Maus-irrelevanten Antikörpers wurde eine neue Generation dieses Agonisten namens NewSTAR2 entwickelt. Es wird angenommen, dass andere Mitglieder des TNFSF ebenfalls auf Tregs abzielen können. Daher wurden zusätzliche Agonisten gegen DR3 und GITR nach denselben Prinzipien wie für NewSTAR2 entwickelt. Eine phänotypische Analyse der Expression dieser drei Rezeptoren wurde durchgeführt, um ihre Spezifität für Tregs vor In-vitro- und In-vivo-Tests mit Mäusen oder murinen Milzzellen zu bestätigen. Bei NewSTAR2 und den anderen Agonisten wurde eine starke Expansion der Tregs sowie eine Hochregulierung der Aktivierungsmarker auf Tregs beobachtet. Gründliche Analysen mit NewSTAR2-behandelten Mäusen zeigten, wie Tregs in mehreren Immun- und Nichtimmunorganen erweitert und immunmodulatorische Rezeptoren hochreguliert wurden. Ein Miniatur-Suppressionstest und andere Kokulturen mit Responderzellen bestätigten deren verstärkte Unterdrückung nicht stimulierter Tregs durch kontaktabhängige und unabhängige Mechanismen. Obwohl auch andere myeloische Zellen nach der Behandlung zunahmen, wurden unter der Steady-State- und prophylaktischen Verabreichung einer Einzeldosis NewSTAR2 keine unerwünschten Wirkungen beobachtet, was die Überlebenshäufigkeit verbesserte und die Entwicklung klinischer Symptome verringerte. Die prophylaktische Behandlung mit den anderen TNFRSF-Agonisten zeigte einen ähnlichen Schutz, Fc(DANA)-muTL1A war jedoch in Bezug auf weniger Todesereignisse und einen niedrigeren klinischen Score überlegen. Es wurde festgestellt, dass nicht alle drei TNFSF-Mitglieder über redundante Funktionen verfügen, da die Entwicklung von Hautläsionen mit dem GITRL-basierten Agonisten Fc(DANA)-muGITRL beobachtet wurde, obwohl die Expansion der Tregs im Steady-State bemerkenswert war und keine offensichtlichen nachteiligen Auswirkungen auftrat. Keiner der beiden Agonisten hatte einen Einfluss auf die Transplantation von Spenderzellen oder die allorektive T-Zell-Reaktion, allerdings reduzierte die NewSTAR2-Behandlung nachweislich Entzündungen im Dünndarm und in der Leber. Diese Arbeit ist ein Beweis für die Wirksamkeit der selektiven Aktivierung von TNFSF, um Tregs zu aktivieren und sie systemisch zu erweitern, sodass sie starke und komplexe Immuninteraktionen steuern können, wie sie GvHD steuern. KW - Regulatorischer T-Lymphozyt KW - Transplantat-Wirt-Reaktion KW - Tumor-Nekrose-Faktor KW - TNFRSF KW - Regulatory T cells KW - Graft versus host disease KW - Tumornekrosefaktor Rezeptor-Superfamilie KW - Regulatorische T-Zellen KW - Transplantat-gegen-Wirt-Reaktion Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-369801 ER - TY - JOUR A1 - Milanese, Alessio A1 - Mende, Daniel R A1 - Paoli, Lucas A1 - Salazar, Guillem A1 - Ruscheweyh, Hans-Joachim A1 - Cuenca, Miguelangel A1 - Hingamp, Pascal A1 - Alves, Renato A1 - Costea, Paul I A1 - Coelho, Luis Pedro A1 - Schmidt, Thomas S. B. A1 - Almeida, Alexandre A1 - Mitchell, Alex L A1 - Finn, Robert D. A1 - Huerta-Cepas, Jaime A1 - Bork, Peer A1 - Zeller, Georg A1 - Sunagawa, Shinichi T1 - Microbial abundance, activity and population genomic profiling with mOTUs2 JF - Nature Communications N2 - Metagenomic sequencing has greatly improved our ability to profile the composition of environmental and host-associated microbial communities. However, the dependency of most methods on reference genomes, which are currently unavailable for a substantial fraction of microbial species, introduces estimation biases. We present an updated and functionally extended tool based on universal (i.e., reference-independent), phylogenetic marker gene (MG)-based operational taxonomic units (mOTUs) enabling the profiling of >7700 microbial species. As more than 30% of them could not previously be quantified at this taxonomic resolution, relative abundance estimates based on mOTUs are more accurate compared to other methods. As a new feature, we show that mOTUs, which are based on essential housekeeping genes, are demonstrably well-suited for quantification of basal transcriptional activity of community members. Furthermore, single nucleotide variation profiles estimated using mOTUs reflect those from whole genomes, which allows for comparing microbial strain populations (e.g., across different human body sites). KW - microbiome KW - software Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-224089 VL - 10 ER - TY - JOUR A1 - Ludwig, Heinz A1 - Delforge, Michel A1 - Facon, Thierry A1 - Einsele, Hermann A1 - Gay, Francesca A1 - Moreau, Philippe A1 - Avet-Loiseau, Hervé A1 - Boccadoro, Mario A1 - Hajek, Roman A1 - Mohty, Mohamad A1 - Cavo, Michele A1 - Dimopoulos, Meletios A A1 - San-Miguel, Jesús F A1 - Terpos, Evangelos A1 - Zweegman, Sonja A1 - Garderet, Laurent A1 - Mateos, María-Victoria A1 - Cook, Gordon A1 - Leleu, Xavier A1 - Goldschmidt, Hartmut A1 - Jackson, Graham A1 - Kaiser, Martin A1 - Weisel, Katja A1 - van de Donk, Niels W. C. J. A1 - Waage, Anders A1 - Beksac, Meral A1 - Mellqvist, Ulf H. A1 - Engelhardt, Monika A1 - Caers, Jo A1 - Driessen, Christoph A1 - Bladé, Joan A1 - Sonneveld, Pieter T1 - Prevention and management of adverse events of novel agents in multiple myeloma: a consensus of the European Myeloma Network JF - Leukemia N2 - During the last few years, several new drugs have been introduced for treatment of patients with multiple myeloma, which have significantly improved the treatment outcome. All of these novel substances differ at least in part in their mode of action from similar drugs of the same drug class, or are representatives of new drug classes, and as such present with very specific side effect profiles. In this review, we summarize these adverse events, provide information on their prevention, and give practical guidance for monitoring of patients and for management of adverse events. KW - disease prevention KW - myeloma Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-237338 VL - 32 ER - TY - JOUR A1 - Kreinberg, Sören A1 - Grbešić, Tomislav A1 - Strauß, Max A1 - Carmele, Alexander A1 - Emmerling, Monika A1 - Schneider, Christian A1 - Höfling, Sven A1 - Porte, Xavier A1 - Reitzenstein, Stephan T1 - Quantum-optical spectroscopy of a two-level system using an electrically driven micropillar laser as a resonant excitation source JF - Light: Science & Applications N2 - Two-level emitters are the main building blocks of photonic quantum technologies and are model systems for the exploration of quantum optics in the solid state. Most interesting is the strict resonant excitation of such emitters to control their occupation coherently and to generate close to ideal quantum light, which is of utmost importance for applications in photonic quantum technology. To date, the approaches and experiments in this field have been performed exclusively using bulky lasers, which hinders the application of resonantly driven two-level emitters in compact photonic quantum systems. Here we address this issue and present a concept for a compact resonantly driven single-photon source by performing quantum-optical spectroscopy of a two-level system using a compact high-β microlaser as the excitation source. The two-level system is based on a semiconductor quantum dot (QD), which is excited resonantly by a fiber-coupled electrically driven micropillar laser. We dress the excitonic state of the QD under continuous wave excitation, and trigger the emission of single photons with strong multi-photon suppression (g\(^{(2)}\)(0)=0.02) and high photon indistinguishability (V = 57±9%) via pulsed resonant excitation at 156 MHz. These results clearly demonstrate the high potential of our resonant excitation scheme, which can pave the way for compact electrically driven quantum light sources with excellent quantum properties to enable the implementation of advanced quantum communication protocols. KW - near-infrared spectroscopy KW - photonic devices KW - semiconductor lasers KW - single photons and quantum effects Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-229802 VL - 7 ER - TY - JOUR A1 - Krah, Franz-Sebastian A1 - Büntgen, Ulf A1 - Schaefer, Hanno A1 - Müller, Jörg A1 - Andrew, Carrie A1 - Boddy, Lynne A1 - Diez, Jeffrey A1 - Egli, Simon A1 - Freckleton, Robert A1 - Gange, Alan C. A1 - Halvorsen, Rune A1 - Heegaard, Einar A1 - Heideroth, Antje A1 - Heibl, Christoph A1 - Heilmann-Clausen, Jacob A1 - Høiland, Klaus A1 - Kar, Ritwika A1 - Kauserud, Håvard A1 - Kirk, Paul M. A1 - Kuyper, Thomas W. A1 - Krisai-Greilhuber, Irmgard A1 - Norden, Jenni A1 - Papastefanou, Phillip A1 - Senn-Irlet, Beatrice A1 - Bässler, Claus T1 - European mushroom assemblages are darker in cold climates JF - Nature Communications N2 - Thermal melanism theory states that dark-colored ectotherm organisms are at an advantage at low temperature due to increased warming. This theory is generally supported for ectotherm animals, however, the function of colors in the fungal kingdom is largely unknown. Here, we test whether the color lightness of mushroom assemblages is related to climate using a dataset of 3.2 million observations of 3,054 species across Europe. Consistent with the thermal melanism theory, mushroom assemblages are significantly darker in areas with cold climates. We further show differences in color phenotype between fungal lifestyles and a lifestyle differentiated response to seasonality. These results indicate a more complex ecological role of mushroom colors and suggest functions beyond thermal adaption. Because fungi play a crucial role in terrestrial carbon and nutrient cycles, understanding the links between the thermal environment, functional coloration and species’ geographical distributions will be critical in predicting ecosystem responses to global warming. KW - evolutionary ecology KW - fungal ecology KW - fungal evolution KW - macroecology Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-224815 VL - 10 ER - TY - JOUR A1 - Hauer, Nadine N. A1 - Popp, Bernt A1 - Schoeller, Eva A1 - Schuhmann, Sarah A1 - Heath, Karen E. A1 - Hisado-Oliva, Alfonso A1 - Klinger, Patricia A1 - Kraus, Cornelia A1 - Trautmann, Udo A1 - Zenker, Martin A1 - Zweier, Christiane A1 - Wiesener, Antje A1 - Jamra, Rami Abou A1 - Kunstmann, Erdmute A1 - Wieczorek, Dagmar A1 - Uebe, Steffen A1 - Ferrazzi, Fulvia A1 - Büttner, Christian A1 - Ekici, Arif B. A1 - Rauch, Anita A1 - Sticht, Heinrich A1 - Dörr, Helmuth-Günther A1 - Reis, André A1 - Thiel, Christian T. T1 - Clinical relevance of systematic phenotyping and exome sequencing in patients with short stature JF - Genetics in Medicine N2 - Purpose Short stature is a common condition of great concern to patients and their families. Mostly genetic in origin, the underlying cause often remains elusive due to clinical and genetic heterogeneity. Methods We systematically phenotyped 565 patients where common nongenetic causes of short stature were excluded, selected 200 representative patients for whole-exome sequencing, and analyzed the identified variants for pathogenicity and the affected genes regarding their functional relevance for growth. Results By standard targeted diagnostic and phenotype assessment, we identified a known disease cause in only 13.6% of the 565 patients. Whole-exome sequencing in 200 patients identified additional mutations in known short-stature genes in 16.5% of these patients who manifested only part of the symptomatology. In 15.5% of the 200 patients our findings were of significant clinical relevance. Heterozygous carriers of recessive skeletal dysplasia alleles represented 3.5% of the cases. Conclusion A combined approach of systematic phenotyping, targeted genetic testing, and whole-exome sequencing allows the identification of the underlying cause of short stature in at least 33% of cases, enabling physicians to improve diagnosis, treatment, and genetic counseling. Exome sequencing significantly increases the diagnostic yield and consequently care in patients with short stature. KW - growth KW - phenotypic spectrum KW - short stature KW - skeletal dysplasia KW - whole-exome sequencing Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-227888 VL - 20 ER - TY - JOUR A1 - Woodcock, B. A. A1 - Garratt, M. P. D. A1 - Powney, G. D. A1 - Shaw, R. F. A1 - Osborne, J. L. A1 - Soroka, J. A1 - Lindström, S. A. M. A1 - Stanley, D. A1 - Ouvrard, P. A1 - Edwards, M. E. A1 - Jauker, F. A1 - McCracken, M. E. A1 - Zou, Y. A1 - Potts, S. G. A1 - Rundlöf, M. A1 - Noriega, J. A. A1 - Greenop, A. A1 - Smith, H. G. A1 - Bommarco, R. A1 - van der Werf, W. A1 - Stout, J. C. A1 - Steffan-Dewenter, I. A1 - Morandin, L. A1 - Bullock, J. M. A1 - Pywell, R. F. T1 - Meta-analysis reveals that pollinator functional diversity and abundance enhance crop pollination and yield JF - Nature Communications N2 - How insects promote crop pollination remains poorly understood in terms of the contribution of functional trait differences between species. We used meta-analyses to test for correlations between community abundance, species richness and functional trait metrics with oilseed rape yield, a globally important crop. While overall abundance is consistently important in predicting yield, functional divergence between species traits also showed a positive correlation. This result supports the complementarity hypothesis that pollination function is maintained by non-overlapping trait distributions. In artificially constructed communities (mesocosms), species richness is positively correlated with yield, although this effect is not seen under field conditions. As traits of the dominant species do not predict yield above that attributed to the effect of abundance alone, we find no evidence in support of the mass ratio hypothesis. Management practices increasing not just pollinator abundance, but also functional divergence, could benefit oilseed rape agriculture. KW - agroecology KW - agriculture KW - ecosystem services KW - environmental sciences Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233787 VL - 10 ER - TY - JOUR A1 - Went, Molly A1 - Sud, Amit A1 - Speedy, Helen A1 - Sunter, Nicola J. A1 - Försti, Asta A1 - Law, Philip J. A1 - Johnson, David C. A1 - Mirabella, Fabio A1 - Holroyd, Amy A1 - Li, Ni A1 - Orlando, Giulia A1 - Weinhold, Niels A1 - van Duin, Mark A1 - Chen, Bowang A1 - Mitchell, Jonathan S. A1 - Mansouri, Larry A1 - Juliusson, Gunnar A1 - Smedby, Karin E A1 - Jayne, Sandrine A1 - Majid, Aneela A1 - Dearden, Claire A1 - Allsup, David J. A1 - Bailey, James R. A1 - Pratt, Guy A1 - Pepper, Chris A1 - Fegan, Chris A1 - Rosenquist, Richard A1 - Kuiper, Rowan A1 - Stephens, Owen W. A1 - Bertsch, Uta A1 - Broderick, Peter A1 - Einsele, Hermann A1 - Gregory, Walter M. A1 - Hillengass, Jens A1 - Hoffmann, Per A1 - Jackson, Graham H. A1 - Jöckel, Karl-Heinz A1 - Nickel, Jolanta A1 - Nöthen, Markus M. A1 - da Silva Filho, Miguel Inacio A1 - Thomsen, Hauke A1 - Walker, Brian A. A1 - Broyl, Annemiek A1 - Davies, Faith E. A1 - Hansson, Markus A1 - Goldschmidt, Hartmut A1 - Dyer, Martin J. S. A1 - Kaiser, Martin A1 - Sonneveld, Pieter A1 - Morgan, Gareth J. A1 - Hemminki, Kari A1 - Nilsson, Björn A1 - Catovsky, Daniel A1 - Allan, James M. A1 - Houlston, Richard S. T1 - Genetic correlation between multiple myeloma and chronic lymphocytic leukaemia provides evidence for shared aetiology JF - Blood Cancer Journal N2 - The clustering of different types of B-cell malignancies in families raises the possibility of shared aetiology. To examine this, we performed cross-trait linkage disequilibrium (LD)-score regression of multiple myeloma (MM) and chronic lymphocytic leukaemia (CLL) genome-wide association study (GWAS) data sets, totalling 11,734 cases and 29,468 controls. A significant genetic correlation between these two B-cell malignancies was shown (Rg = 0.4, P = 0.0046). Furthermore, four of the 45 known CLL risk loci were shown to associate with MM risk and five of the 23 known MM risk loci associate with CLL risk. By integrating eQTL, Hi-C and ChIP-seq data, we show that these pleiotropic risk loci are enriched for B-cell regulatory elements and implicate B-cell developmental genes. These data identify shared biological pathways influencing the development of CLL and, MM and further our understanding of the aetiological basis of these B-cell malignancies. KW - cancer genetics KW - myeloma Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233627 VL - 9 ER - TY - JOUR A1 - Wen, Lai A1 - Feil, Susanne A1 - Wolters, Markus A1 - Thunemann, Martin A1 - Regler, Frank A1 - Schmidt, Kjestine A1 - Friebe, Andreas A1 - Olbrich, Marcus A1 - Langer, Harald A1 - Gawaz, Meinrad A1 - de Wit, Cor A1 - Feil, Robert T1 - A shear-dependent NO-cGMP-cGKI cascade in platelets acts as an auto-regulatory brake of thrombosis JF - Nature Communications N2 - Mechanisms that limit thrombosis are poorly defined. One of the few known endogenous platelet inhibitors is nitric oxide (NO). NO activates NO sensitive guanylyl cyclase (NO-GC) in platelets, resulting in an increase of cyclic guanosine monophosphate (cGMP). Here we show, using cGMP sensor mice to study spatiotemporal dynamics of platelet cGMP, that NO-induced cGMP production in pre-activated platelets is strongly shear-dependent. We delineate a new mode of platelet-inhibitory mechanotransduction via shear-activated NO-GC followed by cGMP synthesis, activation of cGMP-dependent protein kinase I (cGKI), and suppression of Ca2+ signaling. Correlative profiling of cGMP dynamics and thrombus formation in vivo indicates that high cGMP concentrations in shear-exposed platelets at the thrombus periphery limit thrombosis, primarily through facilitation of thrombus dissolution. We propose that an increase in shear stress during thrombus growth activates the NO-cGMP-cGKI pathway, which acts as an auto-regulatory brake to prevent vessel occlusion, while preserving wound closure under low shear. KW - calcium signalling KW - fluorescence imaging KW - platelets KW - thrombosis Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-233616 VL - 9 ER -