TY  - JOUR
A1  - Konte, Tilen
A1  - Terpitz, Ulrich
A1  - Plemenitaš, Ana
T1  - Reconstruction of the High-Osmolarity Glycerol (HOG) Signaling Pathway from the Halophilic Fungus Wallemia ichthyophaga in Saccharomyces cerevisiae
JF  - Frontiers in Microbiology
N2  - The basidiomycetous fungus Wallemia ichthyophaga grows between 1.7 and 5.1 M NaCl and is the most halophilic eukaryote described to date. Like other fungi, W. ichthyophaga detects changes in environmental salinity mainly by the evolutionarily conserved high-osmolarity glycerol (HOG) signaling pathway. In Saccharomyces cerevisiae, the HOG pathway has been extensively studied in connection to osmotic regulation, with a valuable knock-out strain collection established. In the present study, we reconstructed the architecture of the HOG pathway of W. ichthyophaga in suitable S. cerevisiae knock-out strains, through heterologous expression of the W. ichthyophaga HOG pathway proteins. Compared to S. cerevisiae, where the Pbs2 (ScPbs2) kinase of the HOG pathway is activated via the SHO1 and SLN1 branches, the interactions between the W. ichthyophaga Pbs2 (WiPbs2) kinase and the W. ichthyophaga SHO1 branch orthologs are not conserved: as well as evidence of poor interactions between the WiSho1 Src-homology 3 (SH3) domain and the WiPbs2 proline-rich motif, the absence of a considerable part of the osmosensing apparatus in the genome of W. ichthyophaga suggests that the SHO1 branch components are not involved in HOG signaling in this halophilic fungus. In contrast, the conserved activation of WiPbs2 by the S. cerevisiae ScSsk2/ScSsk22 kinase and the sensitivity of W. ichthyophaga cells to fludioxonil, emphasize the significance of two-component (SLN1-like) signaling via Group III histidine kinase. Combined with protein modeling data, our study reveals conserved and non-conserved protein interactions in the HOG signaling pathway of W. ichthyophaga and therefore significantly improves the knowledge of hyperosmotic signal processing in this halophilic fungus.
KW  - signaling
KW  - protein-protein interaction
KW  - protein phosphorylation
KW  - mitogen activated protein kinase (MAPK)
KW  - high-osmolarity glycerol (HOG)
KW  - signaling pathway
KW  - Saccharomyces cerevisiae
KW  - halophilic fungus
KW  - Wallemia ichthyophaga
Y1  - 2016
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-165214
ER  - 
TY  - JOUR
A1  - Eisenhardt, Anja E.
A1  - Sprenger, Adrian
A1  - Röring, Michael
A1  - Herr, Ricarda
A1  - Weinberg, Florian
A1  - Köhler, Martin
A1  - Braun, Sandra
A1  - Orth, Joachim
A1  - Diedrich, Britta
A1  - Lanner, Ulrike
A1  - Tscherwinski, Natalja
A1  - Schuster, Simon
A1  - Dumaz, Nicolas
A1  - Schmidt, Enrico
A1  - Baumeister, Ralf
A1  - Schlosser, Andreas
A1  - Dengjel, Jörn
A1  - Brummer, Tilman
T1  - Phospho-proteomic analyses of B-Raf protein complexes reveal new regulatory principles
JF  - Oncotarget
N2  - B-Raf represents a critical physiological regulator of the Ras/RAF/MEK/ERK-pathway and a pharmacological target of growing clinical relevance, in particular in oncology. To understand how B-Raf itself is regulated, we combined mass spectrometry with genetic approaches to map its interactome in MCF-10A cells as well as in B-Raf deficient murine embryonic fibroblasts (MEFs) and B-Raf/Raf-1 double deficient DT40 lymphoma cells complemented with wildtype or mutant B-Raf expression vectors. Using a multi-protease digestion approach, we identified a novel ubiquitination site and provide a detailed B-Raf phospho-map. Importantly, we identify two evolutionary conserved phosphorylation clusters around T401 and S419 in the B-Raf hinge region. SILAC labelling and genetic/biochemical follow-up revealed that these clusters are phosphorylated in the contexts of oncogenic Ras, sorafenib induced Raf dimerization and in the background of the V600E mutation. We further show that the vemurafenib sensitive phosphorylation of the T401 cluster occurs in trans within a Raf dimer. Substitution of the Ser/Thr-residues of this cluster by alanine residues enhances the transforming potential of B-Raf, indicating that these phosphorylation sites suppress its signaling output. Moreover, several B-Raf phosphorylation sites, including T401 and S419, are somatically mutated in tumors, further illustrating the importance of phosphorylation for the regulation of this kinase.
KW  - BRAF
KW  - proteomics
KW  - phosphorylation
KW  - sorafenib
KW  - protein-protein interaction
Y1  - 2016
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-166529
VL  - 7
IS  - 18
ER  -