TY - JOUR A1 - Böhm, Lena A1 - Torsin, Sanda A1 - Tint, Su Hlaing A1 - Eckstein, Marie Therese A1 - Ludwig, Tobias A1 - Pérez, J. Christian T1 - The yeast form of the fungus Candida albicans promotes persistence in the gut of gnotobiotic mice JF - PLoS Pathogens N2 - Many microorganisms that cause systemic, life-threatening infections in humans reside as harmless commensals in our digestive tract. Yet little is known about the biology of these microbes in the gut. Here, we visualize the interface between the human commensal and pathogenic fungus Candida albicans and the intestine of mice, a surrogate host. Because the indigenous mouse microbiota restricts C. albicans settlement, we compared the patterns of colonization in the gut of germ free and antibiotic-treated conventionally raised mice. In contrast to the heterogeneous morphologies found in the latter, we establish that in germ free animals the fungus almost uniformly adopts the yeast cell form, a proxy of its commensal state. By screening a collection of C. albicans transcription regulator deletion mutants in gnotobiotic mice, we identify several genes previously unknown to contribute to in vivo fitness. We investigate three of these regulators—ZCF8, ZFU2 and TRY4—and show that indeed they favor the yeast form over other morphologies. Consistent with this finding, we demonstrate that genetically inducing non-yeast cell morphologies is detrimental to the fitness of C. albicans in the gut. Furthermore, the identified regulators promote adherence of the fungus to a surface covered with mucin and to mucus-producing intestinal epithelial cells. In agreement with this result, histology sections indicate that C. albicans dwells in the murine gut in close proximity to the mucus layer. Thus, our findings reveal a set of regulators that endows C. albicans with the ability to endure in the intestine through multiple mechanisms. KW - Candida albicans KW - deletion mutagenesis KW - gastrointestinal tract KW - fungi KW - regulator genes KW - gene regulation KW - mouse models KW - fungal genetics Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-159120 VL - 13 IS - 10 ER - TY - JOUR A1 - Weiste, Christoph A1 - Pedrotti, Lorenzo A1 - Selvanayagam, Jebasingh A1 - Muralidhara, Prathibha A1 - Fröschel, Christian A1 - Novák, Ondřej A1 - Ljung, Karin A1 - Hanson, Johannes A1 - Dröge-Laser, Wolfgang T1 - The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth JF - PLoS Genetics N2 - Plants have to tightly control their energy homeostasis to ensure survival and fitness under constantly changing environmental conditions. Thus, it is stringently required that energy-consuming stress-adaptation and growth-related processes are dynamically tuned according to the prevailing energy availability. The evolutionary conserved SUCROSE NON-FERMENTING1 RELATED KINASES1 (SnRK1) and the downstream group C/S\(_{1}\) basic leucine zipper (bZIP) transcription factors (TFs) are well-characterised central players in plants’ low-energy management. Nevertheless, mechanistic insights into plant growth control under energy deprived conditions remains largely elusive. In this work, we disclose the novel function of the low-energy activated group S\(_{1}\) bZIP11-related TFs as regulators of auxin-mediated primary root growth. Whereas transgenic gain-of-function approaches of these bZIPs interfere with the activity of the root apical meristem and result in root growth repression, root growth of loss-of-function plants show a pronounced insensitivity to low-energy conditions. Based on ensuing molecular and biochemical analyses, we propose a mechanistic model, in which bZIP11-related TFs gain control over the root meristem by directly activating IAA3/SHY2 transcription. IAA3/SHY2 is a pivotal negative regulator of root growth, which has been demonstrated to efficiently repress transcription of major auxin transport facilitators of the PIN-FORMED (PIN) gene family, thereby restricting polar auxin transport to the root tip and in consequence auxin-driven primary root growth. Taken together, our results disclose the central low-energy activated SnRK1-C/S\(_{1}\)-bZIP signalling module as gateway to integrate information on the plant’s energy status into root meristem control, thereby balancing plant growth and cellular energy resources. KW - root growth KW - sucrose KW - auxins KW - meristems KW - regulator genes KW - genetically modified plants KW - gene expression KW - plant growth and development Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-157742 VL - 13 IS - 2 ER - TY - JOUR A1 - Morschhäuser, Joachim A1 - Ramírez-Zavala, Bernardo A1 - Weyler, Michael A1 - Gildor, Tsvia A1 - Schmauch, Christian A1 - Kornitzer, Daniel A1 - Arkowitz, Robert T1 - Activation of the Cph1-Dependent MAP Kinase Signaling Pathway Induces White-Opaque Switching in Candida albicans JF - PLoS Pathogens N2 - Depending on the environmental conditions, the pathogenic yeast Candida albicans can undergo different developmental programs, which are controlled by dedicated transcription factors and upstream signaling pathways. C. albicans strains that are homozygous at the mating type locus can switch from the normal yeast form (white) to an elongated cell type (opaque), which is the mating-competent form of this fungus. Both white and opaque cells use the Ste11-Hst7-Cek1/Cek2 MAP kinase signaling pathway to react to the presence of mating pheromone. However, while opaque cells employ the transcription factor Cph1 to induce the mating response, white cells recruit a different downstream transcription factor, Tec1, to promote the formation of a biofilm that facilitates mating of opaque cells in the population. The switch from the white to the opaque cell form is itself induced by environmental signals that result in the upregulation of the transcription factor Wor1, the master regulator of white-opaque switching. To get insight into the upstream signaling pathways controlling the switch, we expressed all C. albicans protein kinases from a tetracycline-inducible promoter in a switching-competent strain. Screening of this library of strains showed that a hyperactive form of Ste11 lacking its N-terminal domain (Ste11ΔN467) efficiently stimulated white cells to switch to the opaque phase, a behavior that did not occur in response to pheromone. Ste11ΔN467-induced switching specifically required the downstream MAP kinase Cek1 and its target transcription factor Cph1, but not Cek2 and Tec1, and forced expression of Cph1 also promoted white-opaque switching in a Wor1-dependent manner. Therefore, depending on the activation mechanism, components of the pheromone-responsive MAP kinase pathway can be reconnected to stimulate an alternative developmental program, switching of white cells to the mating-competent opaque phase. KW - biofilms KW - candida albicans KW - library screening KW - pheromones KW - protein expressions KW - protein kinase signaling cascade KW - regulator genes KW - transcription factors Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-97281 ER - TY - THES A1 - Cho, Seung-Hak T1 - Epidemiologische und molekulare Untersuchungen zur Biofilmbildung in Staphylococcus epidermidis und Staphylococcus aureus T1 - Epidemiological and molecular investigations of the biofilm formation in Staphylococcus epidermidis and Staphylococcus aureus N2 - Staphylococcus aureus und Staphylococcus epidermidis gehören zu den häufigsten Erregern nosokomialer Infektionen bei immunsupprimierten Patienten. Gleichzeitig bilden diese Bakterien einen wesentlichen Teil der gesunden Hautflora des Menschen. Bisher ist wenig darüber bekannt, ob es Unterschiede in der genetischen Ausstattung zwischen klinischen und kommensalen Isolaten gibt und welche Faktoren zur Etablierung von Staphylokokken im Hospitalmilieu beitragen. Die Ergebnisse der vorliegenden Arbeit zeigen, daß die Fähigkeit zur Biofilmbildung offensichtlich ein wesentliches Merkmal pathogener Staphylokokken ist. Die Expression dieses Virulenzfaktors ist dabei hochvariabel und hängt von der genetischen Ausstattung der Stämme mit dem für die Biofilmbildung verantwortlichen ica-Operon, bestimmten Umweltfaktoren und dem Einfluß von Insertionssequenzen ab. In einer epidemiologische Untersuchung wurde gezeigt, daß in S. epidermidis das ica-Operon häufiger in klinischen als in kommensalen Stämmen vorkommt. Der überwiegende Teil dieser ica-positiven Stämme bildete phänotypisch einen Biofilm aus. Im Unterschied dazu enthielten alle untersuchten S. aureus-Stämme, unabhängig von ihrer Herkunft, das vollständige ica-Gencluster, wobei jedoch keiner dieser Stämme unter Laborbedingungen einen Biofilm bildete. Durch subinhibitorischen Konzentrationen bestimmter Antibiotika bzw. durch Osmostress ließ sich die Biofilmbildung in 30 Prozent der S. aureus-Stämme induzieren. Ebenso konnte in ica-positiven S. epidermidis-Stämmen die Biofilmbildung dirch diese Umweltfaktoren stimuliert werden. Die Studie ergab auch, daß es einen Zusammenhang zwischen der Biofilmbildung, der Antibiotikaresistenz und dem Vorkommen der Insertionssequenz IS256 gibt. So war IS256 signifikant häufig in klinischen S. epidermidis und S. aureus-Stämmen nachweisbar, während es keinen Unterschied im Auftreten von IS257 zwischen klinischen und saprophytären Isolaten gab. Die IS256-positiven S. epidermidis-Stämme wiesen überdurchschnittlich oft das ica-Operon auf und waren gegen mindestens zwei Antibiotika gleichzeitig resistent. Weiterhin konnte gezeigt werden, daß IS256 an der Phasenvariation der Biofilmbildung in vivo beteiligt ist. Bei einem klinischen S. epidermidis-Stamm, der von einem Patienten mit einer Katheter-assoziierten Harnwegsinfektion isoliert wurde, wurde die Insertion des Elementes im icaC-Gen nachgewiesen, was in einem Biofilm-negativen Phänotyp resultierte. Subkultivierung der Insertionsmutante führte nach wenigen Passagen zur Ausbildung eines Biofilms. Die Nukleotidsequenzierung ergab die vollständige Exzision von IS256 aus dem icaC-Gen einschließlich der duplizierten Zielsequenz von sieben Basenpaaren. Diese Daten stimmen vollständig mit den zuvor in einer in-vitro-Studie erhaltenenen Ergebnissen überein und sie zeigen, daß IS256 die Expression des ica-Operons offensichtlich auch in vivo während einer Infektion beeinflußt. Bei S. aureus konnte in dieser Arbeit ebenfalls eine Phasenvariation der Biofilmexpression nachgewiesen werden. Durch Mehrfachpassagen wurden aus ehemals Biofilm-negativen Einzelkolonien mehrere Biofilmproduzenten gewonnen, die auch wieder zum Biofilm-negativen Phänotyp revertieren konnten. Die DNA-Analyse mittels Pulsfeldgelelektrophorese zeigte, daß es in den varianten Stämmen zu größeren DNA-Rearrangements gekommen war, die neben der variablen Biofilmbildung auch mit Unterschieden in der Expression des alternativen Transkriptionsfaktors SigmaB einhergingen. Die Nukleotidsequenzierung des sigB-Systems ergab in den Varianten mehrere Punktmutationen in den SigB-Regulatorgenen rsbU und rsbW. Dies legt nahe, daß der SigB-Genlokus einer starken genetischen Variabilität unterliegt, die wiederum pleiotrope Effekte auf die Genexpression in S. aureus ausübt. Durch Northern-Blot-Analysen konnte allerdings gezeigt werden, daß die Biofilmbildung in den S. aureus-Varianten nicht mit der veränderten SigB-Expression in Zusammenhang steht. N2 - Staphylococcus aureus and Staphylococcus epidermidis belong to the most frequent causes of nosocomial infections in immunocompromised patients. These bacteria form an essential part of the healthy skin flora of human beings. Little is known, whether there are differences in the genetic equipment between clinical and commensal isolates and which factors contribute to the setup of staphylococci in the hospital environment. The results of the presented work show that the ability to form biofilms is an essential feature of pathogenic staphylococci. The expression of this virulence factor is highly variable and depends on the presence of the ica operon which is responsible for biofilm formation, specific environmental factors and the influence of insertion sequences. In an epidemiological investigation, it was shown that the ica operon in S. epidermidis is more often present in clinical strains than in commensal ones. The predominant part of these ica-positive strains formed phenotypically a biofilm. In contrast, all examined S. aureus contained, independent of their origin, the complete ica gene clusters, while, however, none of these strains formed a biofilm under laboratory conditions. Biofilm formation could be induced by subinhibitory concentrations of specific antibiotics or osmotic stress in 30 percent of the S. aureus strains. Also, biofilm formation could be stimulated in ica-positive S. epidermidis strains through these environmental factors. The study also revealed that there is an association between biofilm formation, antibiotic resistance and the occurrence of the insertion sequence IS256. Thus, IS256 was significantly more often detected in clinical S. epidermidis and S. aureus strains, while there was no difference in the occurrence of IS257 between clinical and saprophytic isolates. Most of the IS256-positive S. epidermidis strains carried the ica operon and were simultaneously resistant against at least two antibiotics. Furthermore, it was shown that IS256 is involved in phase variation of biofilm formation in vivo. In case of a clinical S. epidermidis strain that was isolated from a patient with a catheter-associated urinary tract infection, the insertion of the element in the icaC gene was detected resulting in a biofilm-negative phenotype. Subcultivation of the insertion mutant resulted in biofilm-forming variants after a few passages. Nucleotide sequencing indicated the complete excision of IS256 from the icaC gene including the duplicated target site sequence of seven base pairs. These data are in agreement with the results received in a recent in vitro study and show that IS256 has an influence on the ica-expression during an infection. In this study, phase variation of biofilm formation was also shown in S. aureus. After serial passages, several biofilm producers were derived from formerly biofilm-negative single colonies which could also revert to the biofilm-negative phenotype again. DNA analysis by pulsed-field gel electrophoresis showed that in the variants large DNA-rearrangements took place. In addition to the variable biofilm production, differences in the expression of the alternative transcription factor SigmaB were observed in the variants. Nucleotide sequencing of the sigB system indicated several point mutations in the SigB regulatory genes rsbU and rsbW of the variants. This implies that the SigB gene locus is subject to a strong genetic variability that results, in turn, in pleiotropic effects on gene expression in S. aureus. However, Northern blot analysis revealed that the biofilm formation in the S. aureus variants are not associated with the varying SigB expression. KW - Staphylococcus aureus KW - Staphylococcus epidermis KW - Biofilm KW - Molekulargenetik KW - Staphylokokken KW - nosokomiale Infektionen KW - Biofilmbildung KW - ica-Operon KW - Insertionssequenzen KW - Phasenvariation KW - Regulatorgene KW - staphylococci KW - nosocomial infections KW - biofilm formation KW - ica Operon KW - insertion sequences KW - phase variation KW - regulator genes Y1 - 2001 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-1181296 ER -