TY - JOUR A1 - Rutten, BPF A1 - Vermetten, E A1 - Vinkers, CH A1 - Ursini, G A1 - Daskalakis, NP A1 - Pishva, E A1 - de Nijs, L A1 - Houtepen, LC A1 - Eijssen, L A1 - Jaffe, AE A1 - Kenis, G A1 - Viechtbauer, W A1 - van den Hove, D A1 - Schraut, KG A1 - Lesch, K-P A1 - Kleinman, JE A1 - Hyde, TM A1 - Weinberger, DR A1 - Schalkwyk, L A1 - Lunnon, K A1 - Mill, J A1 - Cohen, H A1 - Yehuda, R A1 - Baker, DG A1 - Maihofer, AX A1 - Nievergelt, CM A1 - Geuze, E A1 - Boks, MPM T1 - Longitudinal analyses of the DNA methylome in deployed military servicemen identify susceptibility loci for post-traumatic stress disorder JF - Molecular Psychiatry N2 - In order to determine the impact of the epigenetic response to traumatic stress on post-traumatic stress disorder (PTSD), this study examined longitudinal changes of genome-wide blood DNA methylation profiles in relation to the development of PTSD symptoms in two prospective military cohorts (one discovery and one replication data set). In the first cohort consisting of male Dutch military servicemen (n = 93), the emergence of PTSD symptoms over a deployment period to a combat zone was significantly associated with alterations in DNA methylation levels at 17 genomic positions and 12 genomic regions. Evidence for mediation of the relation between combat trauma and PTSD symptoms by longitudinal changes in DNA methylation was observed at several positions and regions. Bioinformatic analyses of the reported associations identified significant enrichment in several pathways relevant for symptoms of PTSD. Targeted analyses of the significant findings from the discovery sample in an independent prospective cohort of male US marines (n = 98) replicated the observed relation between decreases in DNA methylation levels and PTSD symptoms at genomic regions in ZFP57, RNF39 and HIST1H2APS2. Together, our study pinpoints three novel genomic regions where longitudinal decreases in DNA methylation across the period of exposure to combat trauma marks susceptibility for PTSD. KW - Molecular biology KW - Psychiatric disorders Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-227171 VL - 23 IS - 5 ER - TY - JOUR A1 - Abu-Halima, Masood A1 - Häusler, Sebastian A1 - Backes, Christina A1 - Fehlmann, Tobias A1 - Staib, Claudia A1 - Nestel, Sigrun A1 - Nazarenko, Irina A1 - Meese, Eckart A1 - Keller, Andreas T1 - Micro-ribonucleic acids and extracellular vesicles repertoire in the spent culture media is altered in women undergoing \(In\) \(Vitro\) Fertilization JF - Scientific Reports N2 - MicroRNAs (miRNAs) are class of small RNA molecules with major impact on gene regulation. We analyzed the potential of miRNAs secreted from pre-implantation embryos into the embryonic culture media as biomarkers to predict successful pregnancy. Using microarray analysis, we profiled the miRNome of the 56 spent culture media (SCM) after embryos transfer and found a total of 621 miRNAs in the SCM. On average, we detected 163 miRNAs in SCM of samples with failed pregnancies, but only 149 SCM miRNAs of embryos leading to pregnancies. MiR-634 predicted an embryo transfer leading to a positive pregnancy with an accuracy of 71% and a sensitivity of 85%. Among the 621 miRNAs, 102 (16.4%) showed a differential expression between positive and negative outcome of pregnancy with miR-29c-3p as the most significantly differentially expressed miRNA. The number of extracellular vehicles was lower in SCM with positive outcomes (3.8 × 10\(^9\)/mL EVs), as compared to a negative outcome (7.35 × 10\(^9\)/mL EVs) possibly explaining the reduced number of miRNAs in the SCM associated with failed pregnancies. The analysis of the miRNome in the SCM of couples undergoing fertility treatment lays the ground towards development of biomarkers to predict successful pregnancy and towards understanding the role of embryonic miRNAs found in the SCM. KW - Medicine KW - miRNAs KW - Molecular biology KW - Non-coding RNAs Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-173632 VL - 7 ER - TY - THES A1 - Neufeld, Bernd T1 - Neue Interaktionspartner der MAPKAP-Kinasen 3pK und MK2 T1 - New interaction partners of the MAPKAP-kinases 3pK and MK2 N2 - Auf der Suche nach physiologischen Substraten der MAPK-aktivierten Proteinkinasen (MAPKAP-Kinasen), 3pK und MAPKAP-K2 (MK2), wurden Mitglieder eines Säuger-Polycomb-Komplexes, HPH2 und das Protoonkoprotein Bmi1, als Interaktionspartner identifiziert. Proteine aus der Polycomb-Gruppe (PcG) sind dafür bekannt, multimere, Chromatin-assoziierte Proteinkomplexe zu bilden. Diese wirken als transkriptionelle Repressoren und spielen als solche eine wichtige Rolle sowohl in der Regulation von Entwicklungsprozessen als auch in der Kontrolle der zellulären Proliferation. HPH2 bindet im Hefe two-hybrid-System sowohl an 3pK als auch an MK2. Die Kinasen coimmunpräzipitieren auch mit den PcG-Proteinen. Weiterhin wurde festgestellt, daß nicht aktivierte und DNA-assoziierte 3pK, ähnlich wie Bmi1, in einem in vivo Repressionsassay als transkriptioneller Repressor wirkt. Dies unterstellt, daß 3pK, wie Bmi1, fähig sein muß, andere PcG-Proteine an das Zielgen zu rekrutieren, wo sich dann ein biologisch funktioneller Repressionskomplex rekonstituiert. Bmi1 ist ein Phosphoprotein und beide MAPKAP-Kinasen konnten in dieser Arbeit als in vitro Bmi1-Kinasen identifiziert werden. Da der Phosphorylierungsstatus von Bmi1 mit seiner Dissoziation und der anderer PcG-Proteine vom Chromatin korreliert, könnten die MAPKAP-Kinasen Regulatoren einer phosphorylierungs-abhängigen PcG-Komplex/Chromatin-Interaktion sein. 3pK und MK2 wurden hier als die ersten Kinasen identifiziert, die in Assoziation mit Proteinen von PcG-Komplexen vorliegen, was ein funktionelles Zusammenwirken von MAPK-Signaltransduktionsnetzwerk und der Regulation der PcG-Funktion nahe legt. Ein weiterer durch das two-hybrid-System und Coimmunpräzipitationsexperimente identifizierter Interaktionspartner beider hier analysierter MAPKAP-Kinasen ist der basische Helix-Loop-Helix- (bHLH) Transkriptionsfaktor E47. Dieses E2A-kodierte Protein bindet als Homo- bzw. Heterodimer mit gewebespezifischen bHLH-Proteinen an sogenannte E-Box-DNA-Motive und ist so in die Regulation gewebespezifischer Genexpression und Zelldifferenzierung involviert. In dieser Arbeit konnten 3pK und MK2 als in vitro Kinasen des in Zellen phosphoryliert vorliegenden Transkriptionsfaktors identifiziert werden. Weiterhin führte die transiente Expression jeder dieser Kinasen in einem Reportergenassay mit einem E-Box-Promotorkonstrukt zu einer Repression der transkriptionellen Aktivität von E47. Der bHLH-Transkriptionsfaktor E47 interagiert also mit beiden MAPKAP-Kinasen, 3pK und MK2, was die Kinasen als neu identifizierte Regulatoren der E47-abhängigen Genexpression präsentiert. Mit dieser Arbeit ist ein erster Aufschluß der physiologischen Aktivität der MAPKAP-Kinasen 3pK und MK2 als transkriptionelle Regulatoren gelungen. N2 - SUMMARY In a search for physiological substrates for the MAPK-activated protein kinases (MAPKAP kinases), 3pK and MAPKAPK-2 (MK2), constituents of a mammalian polycomb complex, HPH2 and the proto-oncoprotein Bmi1 were identified as interaction partners. Polycomb group (PcG) proteins are characterised to form large multimeric, chromatin-associated protein complexes with repressive transcriptional function. PcG complexes have an important role in the regulation of developmental processes and in the control of cellular proliferation. HPH2 binds to either kinase in a yeast two-hybrid assay and both, 3pK and MK2 are shown here to coimmunoprecipitate with HPH2 and Bmi1 or Bmi1 from mammalian cell lysates, respectively. Further, non-activated and DNA-bound 3pK could be identified as a transcriptional repressor of a chromatin-embedded gene in an artificial repression assay similar to the function of Bmi1. This suggests, that non-activated and DNA-bound 3pK, like Bmi1, must be able to recruit other PcG proteins to the target gene to reconstitute a functional repressive complex. Bmi1 is a phosphoprotein and both, 3pK and MK2 were identified in this paper to be in vitro Bmi1-kinases. Since the Bmi1 phosphorylation status was shown to be correlated with its dissociation from chromatin, it is likely that the MAPKAP kinases might be regulators of phosphorylation-dependent PcG-complex/chromatin interaction. In summary, the MAPK-activated protein kinases 3pK and MK2 are the first kinases identified to be assembled with members of PcG-protein complexes, suggesting a link of the MAPK signalling network to the regulation of PcG complex function. Another new interaction partner of both MAPKAP kinases which was identified by means of the two-hybrid system and coimmunoprecipitation experiments is the basic helix-loop-helix (bHLH) transcription factor E47. This E2A-encoded protein is known to be involved in the regulation of tissue-specific gene expression and cell differentiation. E47 is a phosphoprotein, and 3pK and MK2 were identified as E47-kinases in vitro. Further, expression of either kinase results in a repression of the transcriptional activity of overexpressed E47 in transient reporter gene assays with an E-box containing promoter construct. In summary, the MAPK-activated protein kinases 3pK and MK2 were identified to be assembled with the bHLH transcription factor E47 suggesting that these kinases are regulators of E47 activity and E47 dependent gene expression. These results provide first evidence for the physiological function of the MAPKAP kinases 3pK and MK2 as transcriptional regulators. KW - MAP-Kinase KW - Signaltransduktion KW - Molekularbiologie KW - intrazelluläre Signaltransduktion KW - MAPK-Signalwege KW - MAPKAP-Kinase KW - 3pK KW - MK2 KW - Polycomb KW - HPH2 KW - Bmi1 KW - Molecular biology KW - intracellular signal transduction KW - MAPK-Signalwege KW - MAPKAP kinase KW - 3pK KW - MK2 KW - Polycomb KW - HPH2 KW - Bmi1 KW - bHLH transcription factor Y1 - 2000 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-1765 ER -