TY - JOUR A1 - Fichtner, Alina Suzann A1 - Karunakaran, Mohindar Murugesh A1 - Starick, Lisa A1 - Truman, Richard W. A1 - Herrmann, Thomas T1 - The armadillo (Dasypus novemcinctus): a witness but not a functional example for the emergence of the butyrophilin 3/Vγ9Vδ2 system in placental mammals JF - Frontiers in Immunology N2 - 1-5% of human blood T cells are Vγ9Vδ2 T cells whose T cell receptor (TCR) contain a TRGV9/TRGJP rearrangement and a TRDV2 comprising Vδ2-chain. They respond to phosphoantigens (PAgs) like isopentenyl pyrophosphate or (E)-4-hydroxy-3-methyl-but-2-enyl-pyrophosphate (HMBPP) in a butyrophilin 3 (BTN3)-dependent manner and may contribute to the control of mycobacterial infections. These cells were thought to be restricted to primates, but we demonstrated by analysis of genomic databases that TRGV9, TRDV2, and BTN3 genes coevolved and emerged together with placental mammals. Furthermore, we identified alpaca (Vicugna pacos) as species with typical Vγ9Vδ2 TCR rearrangements and currently aim to directly identify Vγ9Vδ2 T cells and BTN3. Other candidates to study this coevolution are the bottlenose dolphin (Tursiops truncatus) and the nine-banded armadillo (Dasypus novemcinctus) with genomic sequences encoding open reading frames for TRGV9, TRDV2, and the extracellular part of BTN3. Dolphins have been shown to express Vγ9- and Vδ2-like TCR chains and possess a predicted BTN3-like gene homologous to human BTN3A3. The other candidate, the armadillo, is of medical interest since it serves as a natural reservoir for Mycobacterium leprae. In this study, we analyzed the armadillo genome and found evidence for multiple non-functional BTN3 genes including genomic context which closely resembles the organization of the human, alpaca, and dolphin BTN3A3 loci. However, no BTN3 transcript could be detected in armadillo cDNA. Additionally, attempts to identify a functional TRGV9/TRGJP rearrangement via PCR failed. In contrast, complete TRDV2 gene segments preferentially rearranged with a TRDJ4 homolog were cloned and co-expressed with a human Vγ9-chain in murine hybridoma cells. These cells could be stimulated by immobilized anti-mouse CD3 antibody but not with human RAJI-RT1Bl cells and HMBPP. So far, the lack of expression of TRGV9 rearrangements and BTN3 renders the armadillo an unlikely candidate species for PAg-reactive Vγ9Vδ2 T cells. This is in line with the postulated coevolution of the three genes, where occurrence of Vγ9Vδ2 TCRs coincides with a functional BTN3 molecule. KW - TRDV2 KW - butyrophilin 3 KW - coevolution KW - nine-banded armadillo KW - placental mammals KW - Vγ9Vδ2 KW - TRGV9 Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-176044 VL - 9 IS - 265 ER - TY - THES A1 - Karunakaran, Mohindar Murugesh T1 - Evolution of Vγ9Vδ2 T-cells T1 - Die Evolution der Vγ9Vδ2 T-Zellen N2 - Human Vγ9Vδ2 T cells are the major subset of blood γδ T cells and account for 1-5% of blood T cells. Pyrophosphorylated metabolites of isoprenoid biosynthesis are recognized by human Vγ9Vδ2 T cells and are called as phosphoantigens (PAg). Isopentenyl pyrophosphate (IPP) and (E)-4-Hydroxy-3-methyl-but-2-enyl pyrophosphate (HMBPP) are among the few well studied PAg. IPP is found in all organisms while HMBPP is a precursor of IPP found only in eubacteria, plants and apicomplexaen parasite. Interestingly, the PAg reactive Vγ9Vδ2 T cells are so far identified only in human and higher primates but not in rodents. Hence, Vγ9Vδ2 T cells are believed to be restricted to primates. With regard to PAg recognition, a Vγ9JP recombined TCRγ chain and certain CDR3 motifs of the TCR chain are mandatory. The BTN3A1 molecule is essential for a response to PAg. BTN3 is a trans-membrane protein belonging to butyrophilin family of proteins. Though BTN3A1 was found to be essential for PAg presentation, the exact molecular basis of PAg presentation still remains unclear. This thesis presents new data on the evolution of Vγ9Vδ2 TCR and its ligands (BTN3) as well as the genetic basis of PAg presentation to Vγ9Vδ2 TCR. The comprehensive analysis of genomic database sequences at NCBI and other public domain databases revealed for the first time that Vγ9, Vδ2 and BTN3 genes emerged and co-evolved along with the placental mammals. Vγ9, Vδ2 and BTN3 genes are scattered across mammalian species and not restricted to primates. But interestingly, all three genes are highly conserved between phylogenetically distinct species. Moreover, the distribution pattern of Vγ9, Vδ2 TCR genes and BTN3 genes suggests a functional association between these genes representing the TCR - ligand relationship. Alpaca (Vicugna pacos), a member of the camelid family, is one among the 6 candidate non-primate species which were found to possess functional Vγ9, Vδ2 and BTN3 genes. From peripheral lymphocytes of alpaca, Vγ9 chain transcripts with a characteristic JP rearrangement and transcripts of Vδ2 chains with a CDR3 typical for PAg-reactive TCR were identified. The transduction of αβ TCR negative mouse thymoma BW cells with alpaca Vγ9 and Vδ2 TCR chains resulted in surface expression of the TCR complex as it was deduced from detection of cell surface expression of mouse CD3. Cross-linking of alpaca Vγ9Vδ2 TCR transductants with anti-CD3ε led to IL-2 production which confirmed that alpaca Vγ9 and Vδ2 TCR chains pair to form a functional TCR. Besides the conservation of human like Vγ9 and Vδ2 TCR chains, alpaca has conserved an orthologue for human BTN33A1 as well. Interestingly, the predicted PAg binding sites of human BTN3A1 was 100% conserved in deduced amino acid sequence of alpaca BTN3A1. All together alpaca is a promising candidate for further studies as it might have preserved Vγ9Vδ2 T cells to function in surveillance of stress and infections. This thesis also provides the sequence of Vγ9Vδ2 TCR of African green monkey (Chlorocebus aethiops), which was previously unknown. Moreover, our data indicates the lack of any species specific barrier which could hinder the PAg presentation by African monkey derived COS cells to human Vγ9Vδ2 TCR and vice versa of human cells to African green monkey Vγ9Vδ2 TCR which was in contradiction to previously reported findings. Apart from the above, the thesis also presents new data on the genetic basis of PAg presentation to Vγ9Vδ2 T cells, which revealed that human chromosome 6 is sufficient for the presentation of exogenous and endogenous PAg. By employing human/mouse somatic hybrids, we identified the role of human chromosome 6 in PAg presentation and in addition, we observed the lack of capacity of human chromosome 6 positive hybrids to activate Vγ9Vδ2 TCR transductants in the presence of the alkylamine sec-butylamine (SBA). Investigation of Chinese hamster ovary (CHO) cells containing the human chromosome 6 also yielded similar results. This suggests that aminobisphosphonates (zoledronate) and alkylamines employ different mechanisms for activation of Vγ9Vδ2 T cells although both have been described to act by inhibition of farnesyl pyrophosphate synthase activity which is known to increase intracellular levels of the IPP. In conclusion, this thesis suggests that Vγ9, Vδ2 and BTN3 genes controlling Vγ9Vδ2 TCR- ligand relationship emerged and co-evolved along with placental mammals; and also identified candidate non-primate species which could possess Vγ9Vδ2 T cells. Furthermore, it suggests alpaca as a promising non-primate species to investigate the physiological function of Vγ9Vδ2 T cells. With respect to PAg antigen presentation it was shown that chromosome 6 is essential and sufficient for exogenous and endogenous PAg presentation. Moreover, the alkylamine SBA and aminobisphosphonate zoledronate may engage different cellular mechanism to exert inhibition over IPP consumption. The thesis raises interesting questions which need to be addressed in future: 1) What are the environmental and evolutionary factors involved in preservation of Vγ9Vδ2 T cells only by few species? 2) What could be the functional nature and antigen recognition properties of such a conserved T cell subset? 3) What is the genetic and molecular basis of the differential capacity of human chromosome 6 bearing rodent-human hybridoma cells in activating Vγ9Vδ2 T cells in presence of SBA and aminobisphosphonates? N2 - Vγ9Vδ2 T Zellen stellen im Menschen die größte Population an γδ T Zellen im Blut dar. Ihr Anteil an den Blut-T Zellen beträgt 1-5%. Humane Vγ9Vδ2 T Zellen erkennen als Phosphoantigene (PAg) bezeichnete pyrophosphorylierte Metabolite der Isoprenoidbiosynthese wobei Isopentenylpyrophosphat (IPP) und (E)-4-Hydroxy-3-methyl-but-2-enylpyrophosphat (HMBPP) zu den wenigen gut erforschten PAg gehören. IPP ist in allen Organismen zu finden während HMBPP ein IPP Vorläufer ist, der nur in Eubakterien, Pflanzen und Apikomplexa vorkommt. Interessanterweise wurden PAg-reaktive Vγ9Vδ2 T Zellen bisher nur im Menschen und höheren Primaten gefunden, aber nicht in Nagern. Daher wurde angenommen, dass Vγ9Vδ2 T Zellen eine exklusiv in Primaten vorkommende Population darstellt. Hinsichtlich der PAg-Bindung sind TCR  Ketten mit einer Rekombination von Vγ9 und JP zwingend notwendig und bestimmte CDR3 Motive der V2 TCR Kette, wobei die Erkennung der PAg von der Präsenz des BTN3A1 Moleküls abhängt. BTN3 ist ein Transmembranprotein und gehört zur Butyrophilinfamilie. Obwohl gezeigt wurde, das BTN3A für die PAg-Präsentierung unerlässlich ist, ist deren molekularer Mechanismus noch immer unklar. Die vorgelegte Arbeit beinhaltet sowohl neue Daten über die Evolution des Vγ9Vδ2 TCR und dessen Liganden (BTN3), als auch über die genetischen Grundlagen der PAg-Präsentierung. Eine umfassende Analyse genomischer Datenbanksequenzen des NCBI sowie anderer öffentlicher Datenbanken zeigte erstmals, dass Vγ9, Vδ2 und BTN3 Gene zusammen mit den höheren Säugetieren (Placentalia) entstanden und sich gemeinsam weiter entwickelten. Vγ9, Vδ2 und BTN3 Gene existieren über die gesamten Placentalia verteilt und nicht allein in Primaten. Erstaunlicherweise sind alle drei Gene auch zwischen phylogenetisch unterschiedlichen Spezies hoch konserviert und das Verteilungsmuster von Vγ9, Vδ2 und BTN3 Genen lässt auf eine funktionale Verbindung dieser Gene schliessen, wie sie die TCR/Ligand Interaktion darstellt. Weitergehende Analysen resultierten in der Identifizierung von sechs möglichen Kandidatenspezies, die nicht zu den Primaten gehören und funktionelle Vγ9, Vδ2 und BTN3 Gene besitzen. Hierzu gehört auch das Alpaka (Vicugna pacos), ein Mitglied der Famile der Kamele. Aus periphären Alpakalymphozyten wurden TCR-γ-Kettentranskripte mit charakteristischem Vγ9JP Rearrangement sowie TCR-δ-Kettentranskripte mit für PAg-reaktive Zellen typischen CDR3 amplifiziert. Die Transduktion der Alpaka-Vγ9 und Vδ2 Ketten in die TCR-negativen Maus T-Zell Hybridomlinie BW resultierte in einer Oberflächenexpression des TCR Komplex wie aus der Zelloberflächenexpression von Maus CD3 geschlossen werde konnte. Die Aktivierung dieses TCR Komplexes mittels anti-CD3ε Antikörpern führte zur Produktion von IL-2 durch die TCR-Transduktante, was die funktionelle Paarung der Alpaka Vγ9 und Vδ2 TCR-Ketten bestätigte. Neben den Vγ9 und Vδ2 TCR-Kettengenen existiert im Alpakagenom ebenso ein konserviertes Ortholog des humanen BTN3. Interessanterweise sind die mutmaßlichen PAg-Bindungsstellen des humanen BTN3A1 in dessen abgeleiteter Aminosäuresequenz zu 100% konserviert. Diese Daten machen das Alpaka zu einen vielversprechenden Kandidaten für weitere Untersuchungen, da hier möglicherweise die Population der Vγ9Vδ2 Zellen in ihrer Funktion zur Überwachung von Stress und Infektionen erhalten geblieben ist. Ebenso liefert diese Arbeit die Sequenz des Vγ9Vδ2 TCR der Grünen Meerkatze (Chlorocebus aethiops), welche zuvor nicht bekannt war. Darüber hinaus wurde keine Speziesspezifität in der Präsentierung von PAg durch COS Zellen der Grünen Meerkatze für den humanen Vγ9Vδ2 TCR oder umgekehrt der Präsentierung von PAg durch Meerkatzenzellen für humane Vγ9Vδ2 TCRs gefunden, was im im Widerspruch zu bisher veröffentlichten Ergebnissen steht. Zudem liefert diese Arbeit auch neue Ergebnisse zur genetischen Grundlage der PAg- Präsentierung für die Vγ9Vδ2 T Zellen. Hier zeigte sich, dass das humane Chromosom 6 für die Präsentierung exogener sowie endogener PAg ausreicht. Durch die Generierung somatischer Mensch/Maus Hybride konnten wir die Rolle des humanen Chromosom 6 in der Phosphoantigenpräsentierung ermitteln und zudem beobachten, dass Chromosom 6 positive Hybride nicht in der Lage waren, Vγ9Vδ2 TCR Transduktanten in Anwesenheit des Alkylamins sec-Butylamin (SBA) zu aktivieren. Desweiteren brachten Versuche mit Ovarialzellen des chinesischen Hamsters (CHO), die das humane Chromosom 6 enthielten, ähnliche Ergebnisse. Dies legt nahe, dass Aminobisphosphonate (Zoledronat) und Alkylamine unterschiedliche Mechanismen der Aktivierung von Vγ9Vδ2 T Zellen nutzen obwohl für beide beschrieben ist, dass sie durch Inhibition der Farnesylpyrophosphatsynthase wirken, die wiederum zum Anstieg des intrazellulären IPP-Spiegels führt. Zusammengefasst legt diese Arbeit die Co-Evolution der die Vγ9Vδ2 TCR/Ligand Interaktion kontrollierenden Vγ9, Vδ2 und BTN3 Gene in Placentalia nahe und identifiziert nicht den Primaten zugehörige Spezies als Kandidaten, die Vγ9Vδ2T Zellen besitzen könnten, von denen das Alpaka als vielversprechend für die Untersuchung der physiologischen Rolle von Vγ9Vδ2 T Zellen vorgeschlagen wird. Hinsichtlich der PAg-Präsentierung bestätigen die vorliegenden Ergebnisse, dass das humane Chromosom 6 zugleich nötig und ausreichend ist, endogene sowie exogene PAg zu präsentieren. Zudem könnten das Alkylamin SBA und Aminobiosphonat Zoledronat verschiedene Mechanismen zur Inhibierung des IPP Verbrauchs nutzen. Diese Ergebnisse werfen einige Fragen auf, die es in Zukunft zu beantworten gilt: 1) Was sind die Umwelt- und Evolutionsfaktoren, die dazu geführt haben, dass Vγ9Vδ2 T Zellen nur in wenigen Spezies erhalten blieben? 2) Was könnte die funktionale Natur und die Antigenbindungseigenschaften einer solchen konservierten T Zell Population sein? 3) Was ist die genetische und molekulare Grundlage für die unterschiedliche Fähigkeit von das humane Chromosom 6 tragenden Mensch-Nager Hybridomazellen, Vγ9Vδ2 T Zellen in Anwesenheit von SBA und Aminobisphosphonaten zu aktivieren? KW - Evolution KW - γδ T cells KW - Vγ9Vδ2 T cells KW - Alpaca KW - Chromosome 6 KW - BTN3A1 and Phospho-antigen presentation KW - T-Lymphozyt KW - Chromosom 6 Y1 - 2014 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-99871 ER - TY - JOUR A1 - Herrmann, Thomas A1 - Fichtner, Alina Suzann A1 - Karunakaran, Mohindar Murugesh T1 - An Update on the Molecular Basis of Phosphoantigen Recognition by Vγ9Vδ2 T Cells JF - Cells N2 - About 1–5% of human blood T cells are Vγ9Vδ2 T cells. Their hallmark is the expression of T cell antigen receptors (TCR) whose γ-chains contain a rearrangement of Vγ9 with JP (TRGV9JP or Vγ2Jγ1.2) and are paired with Vδ2 (TRDV2)-containing δ-chains. These TCRs respond to phosphoantigens (PAg) such as (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate (HMBPP), which is found in many pathogens, and isopentenyl pyrophosphate (IPP), which accumulates in certain tumors or cells treated with aminobisphosphonates such as zoledronate. Until recently, these cells were believed to be restricted to primates, while no such cells are found in rodents. The identification of three genes pivotal for PAg recognition encoding for Vγ9, Vδ2, and butyrophilin (BTN) 3 in various non-primate species identified candidate species possessing PAg-reactive Vγ9Vδ2 T cells. Here, we review the current knowledge of the molecular basis of PAg recognition. This not only includes human Vγ9Vδ2 T cells and the recent discovery of BTN2A1 as Vγ9-binding protein mandatory for the PAg response but also insights gained from the identification of functional PAg-reactive Vγ9Vδ2 T cells and BTN3 in the alpaca and phylogenetic comparisons. Finally, we discuss models of the molecular basis of PAg recognition and implications for the development of transgenic mouse models for PAg-reactive Vγ9Vδ2 T cells. KW - γδ T cell KW - phosphoantigen KW - BTN KW - butyrophilin 3 KW - butyrophilin 2A1 KW - evolution KW - alpaca KW - human Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-207937 SN - 2073-4409 VL - 9 IS - 6 ER - TY - JOUR A1 - Herrmann, Thomas A1 - Karunakaran, Mohindar Murugesh A1 - Fichtner, Alina Suzann T1 - A glance over the fence: Using phylogeny and species comparison for a better understanding of antigen recognition by human γδ T‐cells JF - Immunological Reviews N2 - Both, jawless and jawed vertebrates possess three lymphocyte lineages defined by highly diverse antigen receptors: Two T‐cell‐ and one B‐cell‐like lineage. In both phylogenetic groups, the theoretically possible number of individual antigen receptor specificities can even outnumber that of lymphocytes of a whole organism. Despite fundamental differences in structure and genetics of these antigen receptors, convergent evolution led to functional similarities between the lineages. Jawed vertebrates possess αβ and γδ T‐cells defined by eponymous αβ and γδ T‐cell antigen receptors (TCRs). “Conventional” αβ T‐cells recognize complexes of Major Histocompatibility Complex (MHC) class I and II molecules and peptides. Non‐conventional T‐cells, which can be αβ or γδ T‐cells, recognize a large variety of ligands and differ strongly in phenotype and function between species and within an organism. This review describes similarities and differences of non‐conventional T‐cells of various species and discusses ligands and functions of their TCRs. A special focus is laid on Vγ9Vδ2 T‐cells whose TCRs act as sensors for phosphorylated isoprenoid metabolites, so‐called phosphoantigens (PAg), associated with microbial infections or altered host metabolism in cancer or after drug treatment. We discuss the role of butyrophilin (BTN)3A and BTN2A1 in PAg‐sensing and how species comparison can help in a better understanding of this human Vγ9Vδ2 T‐cell subset. KW - antigen presentation KW - BTN2 KW - BTN3 KW - butyrophilin KW - evolution KW - γδ TCR Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-218373 VL - 298 IS - 1 SP - 218 EP - 236 ER -