TY - THES A1 - Gilfert, Julia T1 - "Die machen schon was mit Menschen" : Eine kulturanthropologische Annäherung an Mensch-Rabenvogel-Beziehungen T1 - "They do change people in a way” : A cultural anthropological approach to human-corvid relationships N2 - Menschen und Rabenvögel teilen eine lange gemeinsame Kulturgeschichte. Wer hierbei den Anfang gemacht hat, ist schwer zu sagen. Fest steht aber, dass beide Spezies einander in mancherlei Hinsicht verblüffend ähnlich sind, und dass nicht nur Menschen Vögel beobachten, sondern auch umgekehrt. Über teilnehmende Beobachtung und zahlreiche Interviews mit Menschen, die regelmäßig Rabenvögel beobachten oder sie im Rahmen der Wildvogelhilfe pflegen, werden die unterschiedlichen Beschaffenheiten von Mensch-Rabenvogel-Beziehungen aufgezeigt. Dabei wird nach speziesübergreifenden Fürsorgepraktiken, Wissensaushandlungen und ethischen Diskursen gleichermaßen gefragt. Wie wichtig sind haptische und emotionale Berührungen bei der Pflege verletzter Krähen? Wie sind historisch-mythologische Bilder über Raben und Krähen in den Diskurs um Multispezies-Gemeinschaften zwischen Menschen und Rabenvögeln einzuordnen? Welches Potenzial könnten Mensch-Rabenvogel-Beziehungen für die verhaltensbiologische Forschung haben? Vor dem Hintergrund der Multispecies Studies werden Raben und Krähen als Akteur*innen verstanden, die mit Handlungs- und Wirkmacht (agency) ausgestattet sind. Ebenso wie die menschlichen Individuen sind sie dazu fähig, sich in andere Lebewesen, in Dinge und Orte einzuschreiben. Ziel der Studie ist es, Rabenvögel neu zu denken und ebenso Menschen in Verbindung mit Rabenvögeln neu zu denken, um dadurch den Tieren letztlich auf eine neue Art und Weise zu begegnen. N2 - Humans and corvids have been sharing their cultural history for a long time. It is hard to say who started it, but as a matter of fact, both species are stunningly similar to each other in several ways. And it is not only humans watching birds – it is them watching us right back. Using participant observation and numerous interviews with people frequently watching corvids or taking care of injured ones, various qualities of human-corvid relationships can be shown. The study enquires cross-species care practices, negotiations of knowledge and ethical discourses equally. How important is haptic and emotional touch in caring for corvids? How can historical and mythological images be contextualized within the discourse about multispecies communities? What could be the benefit of human-corvid relationships for behavioral biology? Against the background of multispecies studies, corvids are to be understood as actors provided with an agency. Just like human individuals they are capable of inscribing themselves into other creatures, places, and things. This study’s purpose is to understand and to think corvids (and humans in connection with corvids) in a new way to finally encounter them more adequately. T3 - Würzburger Studien zur Europäischen Ethnologie - 11 KW - Kulturanthropologie KW - Rabenvögel KW - Mensch KW - Tiere KW - Human-Animal Studies KW - Mensch-Tier-Studien KW - Multispecies Ethnography KW - Agency KW - Corvids KW - Vögel Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-249464 ER - TY - THES A1 - Mesquita i Joanes, David T1 - "El Contrapunto se estudia para echarlo de repente". Improvisierter Kontrapunkt in Spanien um 1700. T1 - "Counterpoint is studied in order to improvise it". Improvised counterpoint in Spain around 1700. N2 - Mit der vorliegenden Dissertation möchte ich einen Beitrag zur Erforschung des schriftlosen Kontrapunktes leisten. Damit sollen die Studien zum contrapunto alla mente aus den letzten Jahren, die neues Licht auf dieses Phänomen geworfen haben, um einen Bereich erweitert werden, der bis jetzt wenig Beachtung gefunden hat: die weitere Entwicklung des improvisierten Kontrapunktes in Spanien bis ins 18. Jahrhundert. Dadurch eröffnen sich neue Perspektiven für das Verständnis der spanischen Musikkultur des Barockzeitalters. Zu den expliziten Informationen aus den Quellen, die bereits zugänglich gemacht worden sind, soll ein Teil des implizites Wissens hinzutreten, das in den Contrapunto-Lehren – insbesondere in den Notenbeispielen – eingefangen ist. Die vorliegende Arbeit ist also ein Versuch, dieses implizite Wissen freizusetzen. Auch wenn die tatsächlich erklungenen Improvisationen nicht konkret rekonstruierbar sind, lässt sich die Methodik, mit der professionelle Kontrapunktisten ausgebildet wurden, anhand der Contrapunto-Lehren gut nachvollziehen. Im Kern der Dissertation steht eine vergleichende Untersuchung der Quellen, die versucht, Antworten auf eine zentrale Frage zu finden: Nach welchen Methoden und Techniken hat man in Spanien um 1700 gelernt, Kontrapunkt zu improvisieren? N2 - With this dissertation, I would like to make a contribution to the study of scriptless counterpoint. In doing so, the studies on contrapunto alla mente from recent years, which have shed new light on this phenomenon, will be expanded to include an area that has received little attention until now: the further development of improvised counterpoint in Spain up to the 18th century. The core of the dissertation is a comparative study of the sources, which attempts to find answers to a central question: What methods were used to learn to improvise counterpoint in Spain around 1700? KW - Kontrapunkt KW - Improvisation KW - Barock KW - Spanien KW - Contrapunto alla mente Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-251115 ER - TY - RPRT A1 - Heinemann, Oliver A1 - Intraschak, Nils A1 - Salzer, Michel A1 - Simon, Christoph T1 - (Un-)Sichtbarkeit der EU in der Corona-Krise N2 - Die Corona-Krise stellt eine der größten Herausforderungen in der Geschichte der EU dar. Aufgrund der geringen Kompetenzen der EU im Gesundheitsbereich liegt die Pandemiebekämpfung fast ausschließlich in den Händen der Mitgliedstaaten. Diese reagierten jedoch zunächst mit „nationalen Reflexen“ und unsolidarischem Verhalten. Erst nach Überwindung des ersten Schocks im Frühjahr 2020 konnte die EU sichtbarer bei der Krisenbewältigung werden. Den Höhepunkt stellte die Einigung auf das historische 750 Mrd. EUR schwere Corona-Hilfspaket „Next Generation EU“ (NGEU) dar, welches mit einer gemeinsamen Schuldenaufnahme einen Präzedenzfall geschaffen hat. Diese Arbeit untersucht, wie die EU auf die Pandemie reagiert hat und ob diese Reaktion zu ihrer Stärkung führen kann. Sie soll einen Beitrag zum besseren Verständnis der Geschehnisse in der EU zwischen Januar 2020 und Mai 2021 leisten. Hierfür werden zunächst die Kompetenzen der EU im Gesundheitsbereich und beim Katastrophenschutz sowie deren Nutzung in der Pandemie aufgezeigt. Hauptteil der Arbeit ist die Untersuchung von Entstehung und Inhalt des NGEU-Hilfspaktes. Hier zeigt sich, dass die EU – mit Hilfe des deutsch-französischen Motors – zur Solidarität zurückgefunden hat. Die Schwerpunktsetzung von NGEU verdeutlicht, dass neben dem Wiederaufbau auch die aktuellen Kernthemen der EU – Digitalisierung und Klimaschutz – einen zentralen Stellenwert einnehmen. Damit kann NGEU zur wesentlichen Stärkung der EU beitragen. Eine Stärkung ist ebenfalls im Gesundheitsbereich festzustellen, wo erste Schritte zu einer Gesundheitsunion vollzogen wurden. N2 - The Covid crisis is one of the greatest challenges in the history of the EU. Due to the EU's limited competences in the health sector, the fight against the pandemic is almost exclusively in the hands of the member states. However, these initially reacted with "national reflexes" and showed a lack of solidarity. Only after overcoming the first shock in spring 2020 was the EU able to become more visible in crisis management. The culmination was the agreement on the historic EUR 750 billion Corona "Next Generation EU" (NGEU) aid package, which set a precedent with joint borrowing. This paper examines how the EU has responded to the pandemic and whether this response can lead to its strengthening. It aims to contribute to a better understanding of what happened in the EU between January 2020 and May 2021. To this end, the paper first identifies the EU's health and civil protection capabilities and their usage in the pandemic. The main part is an examination of the genesis and content of the NGEU recovery plan. Here it is shown that the EU - with the help of the Franco-German motor - has found its way back to solidarity. The focus of NGEU makes it clear that, in addition to the recovery aspect, the current core issues of the EU - digitalization and climate protection - also have a central position. In this way, NGEU can contribute to the essential strengthening of the EU. Strengthening can also be seen in the healthcare sector, where the first steps towards a health union have been taken. T3 - Würzburger Jean-Monnet-Papers - 4 KW - Europäische Union KW - Covid-19 Pandemie KW - Corona-Krise KW - Krisenbewältigung KW - Covid crisis KW - European Union Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-240625 SN - 2625-6193 ER - TY - THES A1 - Purger, Georg T1 - ,Ein New Wundartzney‘ des Johannes Beris. Eine Quelle zur spätmittelalterlich-frühneuzeitlichen Traumatologie T1 - ,Ein New Wundartzney‘ by Johannes Beris. A source for traumatology of the late medieval and early modern period N2 - Die Zielsetzung der vorliegenden Studie war es, die New Wundartzney von Johannes Beris (in der Ausgabe aus dem Verlag Hermann Gülferich aus Frankfurt am Main von 1552) anhand einer Strukturvorgabe aufzubereiten, so wie Ralf Vollmuth sie in seiner Traumatologie und Feldchirurgie an der Wende vom Mittelalter zur Neuzeit erarbeitet hat. Der Hintergrund für die Analyse und Aufarbeitung mittel¬alter¬lich-frühneuzeitlicher wundärztlicher Quellen nach einer Strukturvorgabe ist, eine wissenschaftliche Vergleichbarkeit herzustellen und folglich den Stand der zeitgenössischen medizinischen und pharma¬zeutischen Bildung aufzuzeigen. Die einseitige Rezeption nur der Werke, die eine zahlreiche Auflage erlebten und demnach weit verbreitet und leicht zugänglich waren, ergibt ein verzerrtes Bild des chirurgischen Wissensstands dieser Zeit. Die Struktur des Originaltexts wurde durchbrochen und die erarbeiteten Informationen an die neue, für einen Vergleich geeignete Struktur angepasst. In diesem Rahmen wurden auch die zahlreichen Wiederholungen von Behand¬lungs¬ansätzen im Original eingekürzt. Diese lassen sich in der Quelle auf die Struktur der Darstellung nach Körperregionen zurückführen und auf die Tatsache, dass zahlreiche Ansätze für mehrere Regionen gleich sind und daher immer wieder erneut vom Verfasser beschrieben werden. In dieser Arbeit werden sie genannt und bei Wiederholung auf die Erstnennung verwiesen. Leider liefert Beris keine aussagekräftigen Informationen über das Instrumentarium und die chirurgischen Techniken seiner Zeit, sondern beschränkt sich auf die wesent¬li¬chen Aspekte der Behandlung, die sich in vielen Fällen sinngemäß oder fast wörtlich wiederholen. Dies ist jedoch in Anbetracht der Art seiner Schrift, nämlich eines Manuals für seine Schüler, verständlich: Er setzt beim Leser Grund¬wissen voraus, was sich im Werk an einem Mangel an Grundlageninformationen wider¬spiegelt. Betrachtet man die New Wundarztney, liefert Beris nur wenige innovative Punkte neben der Hygiene und Sauberkeit am Arbeitsplatz des Wundarztes. Auf Sauberkeit zu achten, mahnt er vor allem bei der Ver¬wen¬dung der pharmazeutischen Bestandteile bei der Herstellung der Salben an. Wei¬ter¬hin lehnt er das erneute Brechen von nicht korrekt positionierten und damit disloziert verheilten Brüchen ab, ebenso das chirurgische Entfernen von Pfeilspitzen; er führt so selten wie möglich eine chirurgische Adaptation der Wundränder aus und lässt Pflaster über Tage hinweg ruhen mit dem Hinweis auf bessere Wundheilung bei Ent¬zündungsfreiheit. Ansonsten entsprechen seine Ausführungen dem Stand der Zeit und klassifizieren Beris als Vertreter von unblutigen Therapien. Die Tatsache, dass die New Wundartzney keine Bildtafeln aufweist, trübt ein wenig das Erscheinungsbild der Quelle, obwohl Bildtafeln in der damaligen Zeit, beispielsweise in gedruckten Handbüchern zur Anatomie und Chirurgie, durchaus üblich waren. Dieses lässt sich darauf zurückführen, dass hier überwiegend Rezepte und Behandlungs¬maßnah¬men für die eigenen Schüler geschildert werden und es sich bei dem Manual um eine wissen¬schaft¬lich eher kleine Schrift handelt. Insgesamt betrachtet kann somit festgehalten werden, dass die Schrift von Beris nur wenig innovatives Wissen vermittelt. Ihren Anspruch, dem damaligen Wundarzt als praxisorientierte Anleitung zur Behandlung von Wunden und zur Herstellung von Pflastern und Wundtränken zu dienen, erfüllt sie jedoch voll und ganz. Viel detaillierter hingegen sind die Rezepte in der New Wundartzney, die nicht von Beris selbst stammen und die der Verleger, wie oben erwähnt, als Wissens¬erweite¬rung eingegliedert hat. Der von Ralf Vollmuth begonnene Katalog von Drogenmonographien konnte anhand der New Wundartzney um 32 neu erarbeitete Beiträge ergänzt werden. Die restlichen 47 der 79 Monographien wurden anhand aktueller Veröffentlichungen verifiziert und wenn notwendig aktualisiert oder ergänzt. Sie stehen damit einer weiteren wissen¬schaft¬lichen Verwen¬dung zur Verfügung. Zum profunderen Studium der Quelle und zur Ergänzung der Arbeit mit einer neuen aktualisierten Textfassung findet man in Kapitel 6 eine Transkription der New Wundartzney. Die vorliegende Arbeit soll als ein ergänzender Baustein in der Aufarbeitung der spät¬mit¬tel-alterlich-frühneuzeitlichen chirurgischen Quellen und als Beitrag zu einem spä¬te¬ren kritischen Vergleich weiterer Quellen dienen. N2 - The main goal of this dissertation was to imply Johannes Beris´ ´New Wundartzney` (published by Hermann Gülferich in Frankfurt am Main in 1552) into the structure developed by Ralf Vollmuth in his ´Traumatologie und Feldchirurgie an der Wende vom Mittelalter zur Neuzeit` , published in 2001. The background for analyzing these surgeons’ books of the late medieval and early modern period are to make these texts scientifically comparable to each other regarding to the surgeons medical and pharmaceutical education of that time. Unfortunately, the broad understanding of this knowledge was not provided by in depth studies, but by the reception of some few, often printed and easy to obtain, medical books published in that period. Beris appears to have only little innovative knowledge to teach in regards of methods of treatment and his recipes for plasters, except for example he was teaching tidiness and cleanness while performing the surgeons duty, already at that time. At the end of this study there is a literal transcription of the original ´New Wundartzney´. KW - Beris, Johannes KW - New Wundartzney Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-223782 ER - TY - JOUR A1 - Zapf, Ludwig A1 - Radius, Udo A1 - Finze, Maik T1 - 1,3-bis(tricyanoborane)imidazoline-2-ylidenate anion - a ditopic dianionic N-heterocyclic carbene ligand JF - Angewandte Chemie International Edition N2 - The 1,3-bis(tricyanoborane)imidazolate anion 1 was obtained in high yield from lithium imidazolate and B(CN)\(_3\)−pyridine adduct. Anion 1 is chemically very robust and thus allowed the isolation of the corresponding H\(_5\)O\(_2\)\(^+\) salt. Furthermore, monoanion 1 served as starting species for the novel dianionic N-heterocyclic carbene (NHC), 1,3-bis(tricyanoborane)imidazoline-2-ylidenate anion 3 that acts as ditopic ligand via the carbene center and the cyano groups at boron. First reactions of this new NHC 3 with methyl iodide, elemental selenium, and [Ni(CO)\(_4\)] led to the methylated imidazolate ion 4, the dianionic selenium adduct 5, and the dianionic nickel tricarbonyl complex 6. These NHC derivatives provide a first insight into the electronic and steric properties of the dianionic NHC 3. Especially the combination of properties, such as double negative charge, different coordination sites, large buried volume and good σ-donor and π-acceptor ability, make NHC 3 a unique and promising ligand and building block. KW - inorganic chemistry KW - N-heterocyclic carbene KW - anioniccarbene KW - boron KW - cyanoborate KW - imidazolate Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-256498 VL - 60 IS - 33 ER - TY - JOUR A1 - Kole, Goutam Kumar A1 - Merz, Julia A1 - Amar, Anissa A1 - Fontaine, Bruno A1 - Boucekkine, Abdou A1 - Nitsch, Jörn A1 - Lorenzen, Sabine A1 - Friedrich, Alexandra A1 - Krummenacher, Ivo A1 - Košćak, Marta A1 - Braunschweig, Holger A1 - Piantanida, Ivo A1 - Halet, Jean-François A1 - Müller-Buschbaum, Klaus A1 - Marder, Todd B. T1 - 2- and 2,7-substituted para-N-methylpyridinium pyrenes: syntheses, molecular and electronic structures, photophysical, electrochemical, and spectroelectrochemical properties and binding to double-stranded (ds) DNA JF - Chemistry - A European Journal N2 - Two N-methylpyridinium compounds and analogous N-protonated salts of 2- and 2,7-substituted 4-pyridyl-pyrene compounds were synthesised and their crystal structures, photophysical properties both in solution and in the solid state, electrochemical and spectroelectrochemical properties were studied. Upon methylation or protonation, the emission maxima are significantly bathochromically shifted compared to the neutral compounds, although the absorption maxima remain almost unchanged. As a result, the cationic compounds show very large apparent Stokes shifts of up to 7200 cm\(^{-1}\). The N-methylpyridinium compounds have a single reduction at ca. −1.5 V vs. Fc/Fc\(^+\) in MeCN. While the reduction process was reversible for the 2,7-disubstituted compound, it was irreversible for the mono-substituted one. Experimental findings are complemented by DFT and TD-DFT calculations. Furthermore, the N-methylpyridinium compounds show strong interactions with calf thymus (ct)-DNA, presumably by intercalation, which paves the way for further applications of these multi-functional compounds as potential DNA-bioactive agents. KW - inorganic chemistry KW - viologens KW - chromophores KW - luminescent KW - pyrenes KW - pyridinium Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-256642 VL - 27 IS - 8 ER - TY - JOUR A1 - Rüger, Carolin T1 - 20 Jahre nach 9/11 – Wie zukunftsfähig ist die Außenpolitik der Europäischen Union? JF - Zeitschrift für Politikwissenschaft N2 - Kein Abstract verfügbar KW - Europäische Union KW - Außenpolitik KW - Gemeinsamen Außen- und Sicherheitspolitik (GASP) KW - Gemeinsame Sicherheits- und Verteidigungspolitik (GSVP) Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-271723 SN - 2366-2638 VL - 31 IS - 4 ER - TY - JOUR A1 - Meyer, Malin Tordis A1 - Watermann, Christoph A1 - Dreyer, Thomas A1 - Ergün, Süleyman A1 - Karnati, Srikanth T1 - 2021 update on diagnostic markers and translocation in salivary gland tumors JF - International Journal of Molecular Sciences N2 - Salivary gland tumors are a rare tumor entity within malignant tumors of all tissues. The most common are malignant mucoepidermoid carcinoma, adenoid cystic carcinoma, and acinic cell carcinoma. Pleomorphic adenoma is the most recurrent form of benign salivary gland tumor. Due to their low incidence rates and complex histological patterns, they are difficult to diagnose accurately. Malignant tumors of the salivary glands are challenging in terms of differentiation because of their variability in histochemistry and translocations. Therefore, the primary goal of the study was to review the current literature to identify the recent developments in histochemical diagnostics and translocations for differentiating salivary gland tumors. KW - salivary gland tumors KW - epithelial salivary gland KW - adenoid cystic carcinoma (ACC) KW - pleomorphic adenoma KW - mucoepidermoid carcinoma KW - diagnostic markers Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-261057 SN - 1422-0067 VL - 22 IS - 13 ER - TY - JOUR A1 - Andelovic, Kristina A1 - Winter, Patrick A1 - Kampf, Thomas A1 - Xu, Anton A1 - Jakob, Peter Michael A1 - Herold, Volker A1 - Bauer, Wolfgang Rudolf A1 - Zernecke, Alma T1 - 2D Projection Maps of WSS and OSI Reveal Distinct Spatiotemporal Changes in Hemodynamics in the Murine Aorta during Ageing and Atherosclerosis JF - Biomedicines N2 - Growth, ageing and atherosclerotic plaque development alter the biomechanical forces acting on the vessel wall. However, monitoring the detailed local changes in wall shear stress (WSS) at distinct sites of the murine aortic arch over time has been challenging. Here, we studied the temporal and spatial changes in flow, WSS, oscillatory shear index (OSI) and elastic properties of healthy wildtype (WT, n = 5) and atherosclerotic apolipoprotein E-deficient (Apoe\(^{−/−}\), n = 6) mice during ageing and atherosclerosis using high-resolution 4D flow magnetic resonance imaging (MRI). Spatially resolved 2D projection maps of WSS and OSI of the complete aortic arch were generated, allowing the pixel-wise statistical analysis of inter- and intragroup hemodynamic changes over time and local correlations between WSS, pulse wave velocity (PWV), plaque and vessel wall characteristics. The study revealed converse differences of local hemodynamic profiles in healthy WT and atherosclerotic Apoe\(^{−/−}\) mice, and we identified the circumferential WSS as potential marker of plaque size and composition in advanced atherosclerosis and the radial strain as a potential marker for vascular elasticity. Two-dimensional (2D) projection maps of WSS and OSI, including statistical analysis provide a powerful tool to monitor local aortic hemodynamics during ageing and atherosclerosis. The correlation of spatially resolved hemodynamics and plaque characteristics could significantly improve our understanding of the impact of hemodynamics on atherosclerosis, which may be key to understand plaque progression towards vulnerability. KW - atherosclerosis KW - mouse KW - 4D flow MRI KW - aortic arch KW - flow dynamics KW - WSS KW - mapping KW - PWV KW - plaque characteristics Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-252164 SN - 2227-9059 VL - 9 IS - 12 ER - TY - JOUR A1 - Popp, Sandy A1 - Schmitt-Böhrer, Angelika A1 - Langer, Simon A1 - Hofmann, Ulrich A1 - Hommers, Leif A1 - Schuh, Kai A1 - Frantz, Stefan A1 - Lesch, Klaus-Peter A1 - Frey, Anna T1 - 5-HTT Deficiency in Male Mice Affects Healing and Behavior after Myocardial Infarction JF - Journal of Clinical Medicine N2 - Anxiety disorders and depression are common comorbidities in cardiac patients. Mice lacking the serotonin transporter (5-HTT) exhibit increased anxiety-like behavior. However, the role of 5-HTT deficiency on cardiac aging, and on healing and remodeling processes after myocardial infarction (MI), remains unclear. Cardiological evaluation of experimentally naïve male mice revealed a mild cardiac dysfunction in ≥4-month-old 5-HTT knockout (−/−) animals. Following induction of chronic cardiac dysfunction (CCD) by MI vs. sham operation 5-HTT−/− mice with infarct sizes >30% experienced 100% mortality, while 50% of 5-HTT+/− and 37% of 5-HTT+/+ animals with large MI survived the 8-week observation period. Surviving (sham and MI < 30%) 5-HTT−/− mutants displayed reduced exploratory activity and increased anxiety-like behavior in different approach-avoidance tasks. However, CCD failed to provoke a depressive-like behavioral response in either 5-Htt genotype. Mechanistic analyses were performed on mice 3 days post-MI. Electrocardiography, histology and FACS of inflammatory cells revealed no abnormalities. However, gene expression of inflammation-related cytokines (TGF-β, TNF-α, IL-6) and MMP-2, a protein involved in the breakdown of extracellular matrix, was significantly increased in 5-HTT−/− mice after MI. This study shows that 5-HTT deficiency leads to age-dependent cardiac dysfunction and disrupted early healing after MI probably due to alterations of inflammatory processes in mice. KW - chronic heart failure KW - myocardial infarction KW - serotonin transporter deficient mice KW - anxiety KW - depression KW - behavior KW - inflammation Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-242739 SN - 2077-0383 VL - 10 IS - 14 ER - TY - JOUR A1 - Nose, Naoko A1 - Nogami, Suguru A1 - Koshino, Kazuhiro A1 - Chen, Xinyu A1 - Werner, Rudolf A. A1 - Kashima, Soki A1 - Rowe, Steven P. A1 - Lapa, Constantin A1 - Fukuchi, Kazuki A1 - Higuchi, Takahiro T1 - [18F]FDG-labelled stem cell PET imaging in different route of administrations and multiple animal species JF - Scientific Reports N2 - Stem cell therapy holds great promise for tissue regeneration and cancer treatment, although its efficacy is still inconclusive and requires further understanding and optimization of the procedures. Non-invasive cell tracking can provide an important opportunity to monitor in vivo cell distribution in living subjects. Here, using a combination of positron emission tomography (PET) and in vitro 2-deoxy-2-[18F]fluoro-D-glucose ([18F]FDG) direct cell labelling, the feasibility of engrafted stem cell monitoring was tested in multiple animal species. Human mesenchymal stem cells (MSCs) were incubated with phosphate-buffered saline containing [18F]FDG for in vitro cell radiolabelling. The pre-labelled MSCs were administrated via peripheral vein in a mouse (n=1), rats (n=4), rabbits (n=4) and non-human primates (n=3), via carotid artery in rats (n=4) and non-human primates (n=3), and via intra-myocardial injection in rats (n=5). PET imaging was started 10 min after cell administration using a dedicated small animal PET system for a mouse and rats. A clinical PET system was used for the imaging of rabbits and non-human primates. After MSC administration via peripheral vein, PET imaging revealed intense radiotracer signal from the lung in all tested animal species including mouse, rat, rabbit, and non-human primate, suggesting administrated MSCs were trapped in the lung tissue. Furthermore, the distribution of the PET signal significantly differed based on the route of cell administration. Administration via carotid artery showed the highest activity in the head, and intra-myocardial injection increased signal from the heart. In vitro [18F]FDG MSC pre-labelling for PET imaging is feasible and allows non-invasive visualization of initial cell distribution after different routes of cell administration in multiple animal models. Those results highlight the potential use of that imaging approach for the understanding and optimization of stem cell therapy in translational research. KW - biomarkers KW - molecular medicine KW - stem-cell research KW - stem cells Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-260590 VL - 11 IS - 1 ER - TY - JOUR A1 - Schneider, Verena A1 - Kruse, Daniel A1 - Bernardelli de Mattos, Ives A1 - Zöphel, Saskia A1 - Tiltmann, Kendra-Kathrin A1 - Reigl, Amelie A1 - Khan, Sarah A1 - Funk, Martin A1 - Bodenschatz, Karl A1 - Groeber-Becker, Florian T1 - A 3D in vitro model for burn wounds: monitoring of regeneration on the epidermal level JF - Biomedicines N2 - Burns affect millions every year and a model to mimic the pathophysiology of such injuries in detail is required to better understand regeneration. The current gold standard for studying burn wounds are animal models, which are under criticism due to ethical considerations and a limited predictiveness. Here, we present a three-dimensional burn model, based on an open-source model, to monitor wound healing on the epidermal level. Skin equivalents were burned, using a preheated metal cylinder. The healing process was monitored regarding histomorphology, metabolic changes, inflammatory response and reepithelialization for 14 days. During this time, the wound size decreased from 25% to 5% of the model area and the inflammatory response (IL-1β, IL-6 and IL-8) showed a comparable course to wounding and healing in vivo. Additionally, the topical application of 5% dexpanthenol enhanced tissue morphology and the number of proliferative keratinocytes in the newly formed epidermis, but did not influence the overall reepithelialization rate. In summary, the model showed a comparable healing process to in vivo, and thus, offers the opportunity to better understand the physiology of thermal burn wound healing on the keratinocyte level. KW - skin models KW - open-source epidermis KW - wound model KW - impedance spectroscopy KW - wound physiology KW - burn wound Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-246068 SN - 2227-9059 VL - 9 IS - 9 ER - TY - JOUR A1 - Vona, Barbara A1 - Mazaheri, Neda A1 - Lin, Sheng-Jia A1 - Dunbar, Lucy A. A1 - Maroofian, Reza A1 - Azaiez, Hela A1 - Booth, Kevin T. A1 - Vitry, Sandrine A1 - Rad, Aboulfazl A1 - Rüschendorf, Franz A1 - Varshney, Pratishtha A1 - Fowler, Ben A1 - Beetz, Christian A1 - Alagramam, Kumar N. A1 - Murphy, David A1 - Shariati, Gholamreza A1 - Sedaghat, Alireza A1 - Houlden, Henry A1 - Petree, Cassidy A1 - VijayKumar, Shruthi A1 - Smith, Richard J. H. A1 - Haaf, Thomas A1 - El-Amraoui, Aziz A1 - Bowl, Michael R. A1 - Varshney, Gaurav K. A1 - Galehdari, Hamid T1 - A biallelic variant in CLRN2 causes non-syndromic hearing loss in humans JF - Human Genetics N2 - Deafness, the most frequent sensory deficit in humans, is extremely heterogeneous with hundreds of genes involved. Clinical and genetic analyses of an extended consanguineous family with pre-lingual, moderate-to-profound autosomal recessive sensorineural hearing loss, allowed us to identify CLRN2, encoding a tetraspan protein, as a new deafness gene. Homozygosity mapping followed by exome sequencing identified a 14.96 Mb locus on chromosome 4p15.32p15.1 containing a likely pathogenic missense variant in CLRN2 (c.494C > A, NM_001079827.2) segregating with the disease. Using in vitro RNA splicing analysis, we show that the CLRN2 c.494C > A variant leads to two events: (1) the substitution of a highly conserved threonine (uncharged amino acid) to lysine (charged amino acid) at position 165, p.(Thr165Lys), and (2) aberrant splicing, with the retention of intron 2 resulting in a stop codon after 26 additional amino acids, p.(Gly146Lysfs*26). Expression studies and phenotyping of newly produced zebrafish and mouse models deficient for clarin 2 further confirm that clarin 2, expressed in the inner ear hair cells, is essential for normal organization and maintenance of the auditory hair bundles, and for hearing function. Together, our findings identify CLRN2 as a new deafness gene, which will impact future diagnosis and treatment for deaf patients. KW - deafness KW - CLRN2 KW - gene Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-267740 SN - 1432-1203 VL - 140 IS - 6 ER - TY - JOUR A1 - Doryab, Ali A1 - Taskin, Mehmet Berat A1 - Stahlhut, Philipp A1 - Schröppel, Andreas A1 - Orak, Sezer A1 - Voss, Carola A1 - Ahluwalia, Arti A1 - Rehberg, Markus A1 - Hilgendorff, Anne A1 - Stöger, Tobias A1 - Groll, Jürgen A1 - Schmid, Otmar T1 - A Bioinspired in vitro Lung Model to Study Particokinetics of Nano-/Microparticles Under Cyclic Stretch and Air-Liquid Interface Conditions JF - Frontiers in Bioengineering and Biotechnology N2 - Evolution has endowed the lung with exceptional design providing a large surface area for gas exchange area (ca. 100 m\(^{2}\)) in a relatively small tissue volume (ca. 6 L). This is possible due to a complex tissue architecture that has resulted in one of the most challenging organs to be recreated in the lab. The need for realistic and robust in vitro lung models becomes even more evident as causal therapies, especially for chronic respiratory diseases, are lacking. Here, we describe the Cyclic In VItro Cell-stretch (CIVIC) “breathing” lung bioreactor for pulmonary epithelial cells at the air-liquid interface (ALI) experiencing cyclic stretch while monitoring stretch-related parameters (amplitude, frequency, and membrane elastic modulus) under real-time conditions. The previously described biomimetic copolymeric BETA membrane (5 μm thick, bioactive, porous, and elastic) was attempted to be improved for even more biomimetic permeability, elasticity (elastic modulus and stretchability), and bioactivity by changing its chemical composition. This biphasic membrane supports both the initial formation of a tight monolayer of pulmonary epithelial cells (A549 and 16HBE14o\(^{-}\)) under submerged conditions and the subsequent cell-stretch experiments at the ALI without preconditioning of the membrane. The newly manufactured versions of the BETA membrane did not improve the characteristics of the previously determined optimum BETA membrane (9.35% PCL and 6.34% gelatin [w/v solvent]). Hence, the optimum BETA membrane was used to investigate quantitatively the role of physiologic cyclic mechanical stretch (10% linear stretch; 0.33 Hz: light exercise conditions) on size-dependent cellular uptake and transepithelial transport of nanoparticles (100 nm) and microparticles (1,000 nm) for alveolar epithelial cells (A549) under ALI conditions. Our results show that physiologic stretch enhances cellular uptake of 100 nm nanoparticles across the epithelial cell barrier, but the barrier becomes permeable for both nano- and micron-sized particles (100 and 1,000 nm). This suggests that currently used static in vitro assays may underestimate cellular uptake and transbarrier transport of nanoparticles in the lung. KW - lung cell model KW - cyclic stretch KW - ALI culture KW - bioinspired membrane KW - particle study Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-223830 SN - 2296-4185 VL - 9 ER - TY - JOUR A1 - Doryab, Ali A1 - Taskin, Mehmet Berat A1 - Stahlhut, Philipp A1 - Schröppel, Andreas A1 - Wagner, Darcy E. A1 - Groll, Jürgen A1 - Schmid, Otmar T1 - A Biomimetic, Copolymeric Membrane for Cell‐Stretch Experiments with Pulmonary Epithelial Cells at the Air‐Liquid Interface JF - Advanced Functional Materials N2 - Chronic respiratory diseases are among the leading causes of death worldwide, but only symptomatic therapies are available for terminal illness. This in part reflects a lack of biomimetic in vitro models that can imitate the complex environment and physiology of the lung. Here, a copolymeric membrane consisting of poly(ε‐)caprolactone and gelatin with tunable properties, resembling the main characteristics of the alveolar basement membrane is introduced. The thin bioinspired membrane (≤5 μm) is stretchable (up to 25% linear strain) with appropriate surface wettability and porosity for culturing lung epithelial cells under air–liquid interface conditions. The unique biphasic concept of this membrane provides optimum characteristics for initial cell growth (phase I) and then switch to biomimetic properties for cyclic cell‐stretch experiments (phase II). It is showed that physiologic cyclic mechanical stretch improves formation of F‐actin cytoskeleton filaments and tight junctions while non‐physiologic over‐stretch induces cell apoptosis, activates inflammatory response (IL‐8), and impairs epithelial barrier integrity. It is also demonstrated that cyclic physiologic stretch can enhance the cellular uptake of nanoparticles. Since this membrane offers considerable advantages over currently used membranes, it may lead the way to more biomimetic in vitro models of the lung for translation of in vitro response studies into clinical outcome. KW - alveolar‐capillary barrier KW - cyclic mechanical stretch KW - hybrid polymers KW - in vitro cell‐stretch model KW - tunable ultra‐thin biphasic membrane Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-225645 VL - 31 IS - 10 ER - TY - JOUR A1 - Würthner, Frank A1 - Noll, Niklas T1 - A Calix[4]arene‐Based Cyclic Dinuclear Ruthenium Complex for Light‐Driven Catalytic Water Oxidation JF - Chemistry - A European Journal N2 - A cyclic dinuclear ruthenium(bda) (bda: 2,2’‐bipyridine‐6,6’‐dicarboxylate) complex equipped with oligo(ethylene glycol)‐functionalized axial calix[4]arene ligands has been synthesized for homogenous catalytic water oxidation. This novel Ru(bda) macrocycle showed significantly increased catalytic activity in chemical and photocatalytic water oxidation compared to the archetype mononuclear reference [Ru(bda)(pic)\(_2\)]. Kinetic investigations, including kinetic isotope effect studies, disclosed a unimolecular water nucleophilic attack mechanism of this novel dinuclear water oxidation catalyst (WOC) under the involvement of the second coordination sphere. Photocatalytic water oxidation with this cyclic dinuclear Ru complex using [Ru(bpy)\(_3\)]Cl\(_2\) as a standard photosensitizer revealed a turnover frequency of 15.5 s\(^{−1}\) and a turnover number of 460. This so far highest photocatalytic performance reported for a Ru(bda) complex underlines the potential of this water‐soluble WOC for artificial photosynthesis. KW - water KW - oxidation KW - ruthenium KW - dinuclear KW - catalytic KW - artificial photosynthesis KW - homogenous catalysis KW - photocatalysis KW - ruthenium complexes KW - water oxidation Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-230030 UR - https://chemistry-europe.onlinelibrary.wiley.com/doi/10.1002/chem.202004486 VL - 27 IS - 1 ER - TY - JOUR A1 - Rosenfeldt, Mathias T. A1 - Hartmann, Elena M. A1 - Leng, Corinna A1 - Rosenwald, Andreas A1 - Anagnostopoulos, Ioannis T1 - A case of nodular lymphocyte predominant Hodgkin lymphoma with unexpected EBV-latency type JF - Annals of Hematology N2 - No abstract available. KW - nodular lymphcyte KW - Hodgkin lymphoma Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-232571 SN - 0939-5555 VL - 100 ER - TY - JOUR A1 - Ziegler, Georg C. A1 - Ehlis, Ann-Christine A1 - Weber, Heike A1 - Vitale, Maria Rosaria A1 - Zöller, Johanna E. M. A1 - Ku, Hsing-Ping A1 - Schiele, Miriam A. A1 - Kürbitz, Laura I. A1 - Romanos, Marcel A1 - Pauli, Paul A1 - Kalisch, Raffael A1 - Zwanzger, Peter A1 - Domschke, Katharina A1 - Fallgatter, Andreas J. A1 - Reif, Andreas A1 - Lesch, Klaus-Peter T1 - A Common CDH13 Variant is Associated with Low Agreeableness and Neural Responses to Working Memory Tasks in ADHD JF - Genes N2 - The cell—cell signaling gene CDH13 is associated with a wide spectrum of neuropsychiatric disorders, including attention-deficit/hyperactivity disorder (ADHD), autism, and major depression. CDH13 regulates axonal outgrowth and synapse formation, substantiating its relevance for neurodevelopmental processes. Several studies support the influence of CDH13 on personality traits, behavior, and executive functions. However, evidence for functional effects of common gene variation in the CDH13 gene in humans is sparse. Therefore, we tested for association of a functional intronic CDH13 SNP rs2199430 with ADHD in a sample of 998 adult patients and 884 healthy controls. The Big Five personality traits were assessed by the NEO-PI-R questionnaire. Assuming that altered neural correlates of working memory and cognitive response inhibition show genotype-dependent alterations, task performance and electroencephalographic event-related potentials were measured by n-back and continuous performance (Go/NoGo) tasks. The rs2199430 genotype was not associated with adult ADHD on the categorical diagnosis level. However, rs2199430 was significantly associated with agreeableness, with minor G allele homozygotes scoring lower than A allele carriers. Whereas task performance was not affected by genotype, a significant heterosis effect limited to the ADHD group was identified for the n-back task. Heterozygotes (AG) exhibited significantly higher N200 amplitudes during both the 1-back and 2-back condition in the central electrode position Cz. Consequently, the common genetic variation of CDH13 is associated with personality traits and impacts neural processing during working memory tasks. Thus, CDH13 might contribute to symptomatic core dysfunctions of social and cognitive impairment in ADHD. KW - ADHD KW - CDH13 KW - neurodevelopment KW - executive functions KW - working memory KW - Big Five KW - agreeableness Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-245220 SN - 2073-4425 VL - 12 IS - 9 ER - TY - THES A1 - Karimi, Sohail Mehmood T1 - A Comparative Study on Guard Cell Function of the Glycophyte \(Arabidopsis\) \(thaliana\) and the Halophyte \(Thellungiella\) \(salsuginea\) Under Saline Growth Conditions T1 - Eine vergleichende Studie zur Schließzellfunktion des Glycophyten \(Arabidopsis\) \(thaliana\) und des Halophyten \(Thellungiella\) \(salsuginea\) unter salinen Wachstumsbedingungen N2 - The greatest problems faced during the 21st century is climate change which is a big threat to food security due to increasing number of people. The increase in extreme weather events, such as drought and heat, makes it difficult to cultivate conventional crops that are not stress tolerant. As a result, increasing irrigation of arable land leads to additional salinization of soils with plant-toxic sodium and chloride ions. Knowledge about the adaptation strategies of salt-tolerant plants to salt stress as well as detailed knowledge about the control of transpiration water loss of these plants are therefore important to guarantee productive agriculture in the future. In the present study, I have characterized salt sensitive and salt tolerant plant species at physiological, phenotypic and transcriptomic level under short (1x salt) and long-time (3x) saline growth conditions. Two approaches used for long-time saline growth conditions (i.e increasing saline conditions (3x salt) and constant high saline conditions (3x 200 mM salt) were successfully developed in the natural plant growth medium i.e soil. Salt sensitive plants, A. thaliana, were able to survive and successfully set seeds at the toxic concentrations on the increasing saline growth mediums, with minor changes in the phenotype. However, under constant high saline conditions they could not survive. This was due to keeping low potassium, and high salt ions (sodium and chloride) in the photosynthetic tissue i.e leaf. Similarly, high potassium and low salt ions in salt tolerant T. salsuginea on both saline environments were the key for survival of this plant species. Being salt tolerant, T. salsuginea always kept high potassium levels and low sodium (during 1x) and chloride levels (during both 1x and 3x) in the leaf tissue. A strict control over transpirational water loss via stomata (formed by pair of guard cells) is important to maintain plant water balance. Aperture size of the stomata is regulated by the turgidity of the guard cells. More turgid the guard cells, bigger the apertures are and hence more transpiration. Under osmotic stress, the water loss is reduced which was evident in the salt sensitive A. thaliana plants under both short and long-time saline growth conditions. As the osmotic stress was only increased during long time saline growth conditions in T. salsuginea therefore, water loss was also decreased only under these saline conditions. Environmental CO2 assimilation also takes place via stomata in plants which then is used for photosynthesis. Stomatal apertures also influence CO2 assimilation. As the light absorbing photosynthetic pigments were more affected in A. thaliana, therefore photosynthetic activity of the whole plant was also reduced. Similarly, both short and long-time saline growth conditions also reduced the effective quantum yield of A. thaliana guard cells. Growth of the plant is dependent on energy which comes from photosynthesis. Reduced environmental CO2 assimilation would affect photosynthesis and hence growth, which was clearly observed in A. thaliana guard cells under long-time saline growth conditions. Major differences in both guard cells types were observed in their chloride and potassium levels. Energy Dispersive X-Ray Analysis (EDXA) suggested strict control of chloride accumulation in T. salsuginea guard cells as the levels remain unchanged under all conditions. Similarly, use of sodium in place of potassium for osmotic adjustments seems to be dependent on Na+/K+ rations in both guard cell types. Increased salt ions and reduced potassium levels in A. thaliana guard cells posed negative effect on photochemistry which in turn increased ROS metabolism and reduced energy related pathways at transcriptomic level in this plant species. Moreover, photosynthesis was strongly affected in A. thaliana guard cells both at transcriptomic and physiological levels. Similarly, global phytohormones induced changes were more evident in A. thaliana guard cells especially on 3x salt medium. Among all phytohormones, genes under the control of auxin were more differentially expressed in A. thaliana guard cells which suggests wide changes in growth and development in this plant species under salinity. Phytohormone, ABA is vital for closing the stomata under abiotic stress conditions. Increased levels of ABA during saline conditions led to efflux of potassium and counter anions (chloride, malate, nitrate) from the guard cells which caused the outward flow of water and hence reduction in turgor pressure. Reduced turgor pressure led to reduced water loss and CO2 assimilation especially in A. thaliana. Guard cells of both plant species synthesized ABA during saline conditions which was reflected from transcriptomic data and ABA quantification in the guard cells. ABA induced signaling in both plant species varied at the ABA receptor (PYL/PYR) levels where totally contrasting responses were observed. PYL2, PYL8 and PYL9 were specific to A. thaliana, furthermore, PYL2 was found to be differentially expressed only under 3x salt growth conditions thus suggesting its role during long term salt stress in this plant species. Protein phosphatases, which negatively regulate ABA signaling on one hand and act as ABA sensor on the other hand were found to be more differentially expressed in A. thaliana than T. salsuginea guard cells, which suggests their diverse role in both plant species under saline conditions. Differential expression of more ABA signaling players in long time saline conditions was prominent which could be because of darkness, as it is well known that rapid closure of stomata under dark conditions require ABA signaling. Moreover, representation of these components in dark also suggests that plants become more sensitive to dark under saline conditions which is also evident from the transpiration rates. Altogether, increased salt ions in A. thaliana guard cells and leaves led to pigment degradation and ABA induced reduction in transpiration which in turn influenced its growth. In contrast, T. salsuginea is the salt excluder and therefore keeps low levels of salt ions especially the chloride both in leaves and guard cells which mildly affects its growth. Guard cells of A. thaliana encounter severe energy problems at physiological and transcriptomic level. Main differences in the ABA signalling between both plant species were observed at the ABA receptor level. N2 - Das größte Problem des 21. Jahrhunderts ist der Klimawandel, der aufgrund der wachsenden Zahl von Menschen eine große Bedrohung für die Ernährungssicherheit darstellt. Die Zunahme extremer Wetterereignisse wie Dürre und Hitze erschwert den Anbau konventioneller, nicht stressresistenter Pflanzen. Eine zunehmende Bewässerung von Ackerland führt daher zu einer zusätzlichen Versalzung der Böden mit pflanzentoxischen Natrium- und Chloridionen. Kenntnisse über die Anpassungsstrategien salztoleranter Pflanzen an Salzstress sowie detaillierte Kenntnisse über die Kontrolle des Wasserverlusts durch Transpiration dieser Pflanzen sind daher wichtig, um eine produktive Landwirtschaft auch in Zukunft zu gewährleisten. In der vorliegenden Studie habe ich salzempfindliche und salztolerante Pflanzenarten auf physiologischer, phänotypischer und transkriptioneller Ebene unter kurzen (1x Salz) und langen (3x) Salzwachstumsbedingungen charakterisiert. In dem natürlichen Pflanzenwachstumsmedium, dh. dem Boden, wurden zwei Ansätze erfolgreich entwickelt, die für lang anhaltende Salzwachstumsbedingungen (dh zunehmende Salzbedingungen (3x Salz) und konstant hohe Salzbedingungen (3x 200 mM Salz) verwendet wurden. Die Pflanzen waren in der Lage, Samen bei den toxischen Konzentrationen auf den ansteigenden Salzwachstumsmedien zu überleben und erfolgreich zu setzen, wobei geringfügige Änderungen des Phänotyps auftraten. Unter konstant hohen Salzbedingungen konnten sie jedoch nicht überleben. Dies lag daran, dass wenig Kalium und hohe Salzionen vorhanden waren (Natrium und Chlorid) im photosynthetischen Gewebe, dh im Blatt. Ebenso stellten hohe Kalium- und niedrige Salzionen in salztoleranten T. salsuginea in beiden salzhaltigen Umgebungen den Schlüssel zum Überleben dieser Pflanzenart dar. Da T. salsuginea salztolerant war, blieb der Kaliumspiegel stets hoch und der Natrium- (während 1x) und Chloridspiegel (während 1x und 3x) im Blattgewebe niedrig. Eine strikte Kontrolle des transpirationelen Wasserverlusts über Stomata (gebildet von zwei Schließzellen) ist wichtig, um den Wasserhaushalt der Pflanzen aufrechtzuerhalten. Die Öffnungsgröße der Stomata wird durch den Turgor der Schutzzellen reguliert. Je praller die Schließzellen, desto größer die Öffnungen und damit die Transpiration. Unter osmotischem Stress wird der Wasserverlust verringert, was bei den salzempfindlichen A. thaliana-Pflanzen sowohl unter kurz- als auch langfristigen Salzwachstumsbedingungen offensichtlich war. Da der osmotische Stress in T. salsuginea nur über einen langen Zeitraum unter Salzwachstumsbedingungen anstieg, verringerte sich auch der Wasserverlust nur unter diesen Salzbedingungen. Die Aufnahme von CO2 in die Umwelt erfolgt auch über die Stomata und wird dann für die Photosynthese verwendet. Stomata beeinflussen daher auch die CO2-Assimilation. Da die lichtabsorbierenden photosynthetischen Pigmente in A. thaliana stärker betroffen waren, war auch die photosynthetische Aktivität der gesamten Pflanze verringert. In ähnlicher Weise verringerten sowohl kurz- als auch langzeitige Salzwachstumsbedingungen auch die effektive Quantenausbeute von A. thaliana-Schließzellen. Das Wachstum der Pflanze hängt von der Energie ab, die aus der Photosynthese stammt. Eine verringerte CO2-Assimilation aus der Umwelt würde die Photosynthese und damit das Wachstum beeinträchtigen, was bei A. thaliana-Schließzellenn unter lang andauerenden Salzwachstumsbedingungen deutlich zu beobachten war. Wesentliche Unterschiede bei beiden Schließzelltypen wurden in ihren Chlorid- und Kaliumspiegeln beobachtet. Die energiedispersive Röntgenanalyse (EDXA) ergab eine strikte Kontrolle der Chloridakkumulation in T. salsuginea Schließzellen, da die Chloridkonzentrationen unter allen Bedingungen unverändert bleiben. In ähnlicher Weise scheint die Verwendung von Natrium anstelle von Kalium für osmotische Anpassungen von Na + / K + -Verhältnissen in beiden Schließzelltypen abhängig zu sein. Erhöhte Salzionen und verringerte Kaliumspiegel in A. thaliana-Schließzellen wirkten sich negativ auf die Photochemie aus, was wiederum den ROS-Metabolismus erhöhte und die energiebezogenen Wege auf transkriptomischem Niveau bei dieser Pflanzenart verringerte. Darüber hinaus war die Photosynthese in A. thaliana-Schließzellen sowohl auf transkriptioneller als auch auf physiologischer Ebene stark beeinträchtigt. In ähnlicher Weise waren globale Phytohormon-induzierte Veränderungen in A. thaliana-Schließzellen, insbesondere auf 3 × Salzmedium, deutlicher. Unter allen Phytohormonen wurden Gene unter der Kontrolle von Auxin in A. thaliana-Schließzellen differenzierter exprimiert, was auf weitreichende Veränderungen im Wachstum und in der Entwicklung dieser Pflanzenart unter Salzgehalt hindeutet. Das Phytohormon ABA ist für das Schließen der Stomata unter abiotischen Stressbedingungen von entscheidender Bedeutung. Erhöhte ABA-Spiegel unter Salzbedingungen führten zum Austritt von Kalium und Gegenanionen (Chlorid, Malat, Nitrat) aus den Schließzellen, was den Wasserfluss nach außen und damit eine Verringerung des Turgordrucks bewirkte. Reduzierter Turgordruck führte insbesondere bei A. thaliana zu einem geringeren Wasserverlust und einer geringeren CO2-Aufnahme. Die Schließzellen beider Pflanzenarten synthetisierten ABA unter Salzbedingungen, was sich aus den Transkriptomdaten und der ABA-Quantifizierung in den Schließzellen widerspiegelte. Die ABA-induzierte Signalübertragung in beiden Pflanzenarten variierte bei den ABA-Rezeptor- (PYL / PYR-) Spiegeln, bei denen völlig unterschiedliche Reaktionen beobachtet wurden. PYL2, PYL8 und PYL9 waren spezifisch für A. thaliana. Darüber hinaus wurde festgestellt, dass PYL2 nur unter dreifachen Salzwachstumsbedingungen unterschiedlich exprimiert wird, was auf seine Rolle bei langfristigem Salzstress bei dieser Pflanzenart hindeutet. Es wurde gefunden, dass Proteinphosphatasen, die einerseits die ABA-Signalübertragung negativ regulieren und andererseits als ABA-Sensor wirken, in A. thaliana differenzierter exprimiert werden als in T. salsuginea-Schließzellen, was auf ihre vielfältige Rolle in beiden Pflanzenarten unter Salzbedingungen hindeutet. Eine differenzierte Expression von mehr ABA-Signalgebern unter Bedingungen mit langer Salzwasserbewässerung war auffällig, was auf Dunkelheit zurückzuführen sein könnte, da bekanntlich ein schnelles Schließen der Stomata unter dunklen Bedingungen eine ABA-Signalgebung erfordert. Darüber hinaus deutet die Darstellung dieser Komponenten im Dunkeln auch darauf hin, dass Pflanzen unter salzhaltigen Bedingungen empfindlicher gegenüber Dunkelheit werden, was auch aus den Transpirationsraten hervorgeht. Insgesamt führten erhöhte Salzionen in A. thaliana-Schließzzellen und Blättern zu einem Pigmentabbau und einer durch ABA verursachten Reduktion der Transpiration, was deren Wachstum beeinflusste. Im Gegensatz dazu ist T. salsuginea in der Lage Salz auszuschließen und hält daher geringe Mengen an Salzionen, insbesondere das Chlorid sowohl in Blättern als auch in Schließzellen, dass sein Wachstum geringfügig beeinflusst. Schließzellen von A. thaliana stoßen auf physiologischer und transkriptomischer Ebene auf schwerwiegende Energieprobleme. Hauptunterschiede in der ABA-Signalgebung zwischen beiden Pflanzenarten wurden auf der ABA-Rezeptorebene beobachtet. KW - Glycophyten KW - Halophyten KW - salinen Wachstumsbedingungen KW - Schließzellfunktion KW - Transkriptomik anlyze KW - Halophytes KW - glycophytes KW - salt stress KW - guard cells KW - transcriptomic analysis Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-190942 ER - TY - THES A1 - Beer, Katharina T1 - A Comparison of the circadian clock of highly social bees (\(Apis\) \(mellifera\)) and solitary bees (\(Osmia\) \(spec.\)): Circadian clock development, behavioral rhythms and neuroanatomical characterization of two central clock components (PER and PDF) T1 - Ein Vergleich der Inneren Uhr von sozialen Bienen (\(Apis\) \(mellifera\)) und solitären Bienen (\(Osmia\) \(spec.\)): Entwicklung der circadianen Uhr, Verhaltensrhythmen und neuroanatomische Beschreibung von zwei zentralen Uhr Komponenten (PER und PDF) N2 - Summary Bees, like many other organisms, evolved an endogenous circadian clock, which enables them to foresee daily environmental changes and exactly time foraging flights to periods of floral resource availability. The social lifestyle of a honey bee colony has been shown to influence circadian behavior in nurse bees, which do not exhibit rhythmic behavior when they are nursing. On the other hand, forager bees display strong circadian rhythms. Solitary bees, like the mason bee, do not nurse their offspring and do not live in hive communities, but face the same daily environmental changes as honey bees. Besides their lifestyle mason and honey bees differ in their development and life history, because mason bees overwinter after eclosion as adults in their cocoons until they emerge in spring. Honey bees do not undergo diapause and have a relatively short development of a few weeks until they emerge. In my thesis, I present a comparison of the circadian clock of social honey bees (Apis mellifera) and solitary mason bees (Osmia bicornis and Osmia cornuta) on the neuroanatomical level and behavioral output level. I firstly characterized in detail the localization of the circadian clock in the bee brain via the expression pattern of two clock components, namely the clock protein PERIOD (PER) and the neuropeptide Pigment Dispersing Factor (PDF), in the brain of honey bee and mason bee. PER is localized in lateral neuron clusters (which we called lateral neurons 1 and 2: LN1 and LN2) and dorsal neuron clusters (we called dorsal lateral neurons and dorsal neurons: DLN, DN), many glia cells and photoreceptor cells. This expression pattern is similar to the one in other insect species and indicates a common ground plan of clock cells among insects. In the LN2 neuron cluster with cell bodies located in the lateral brain, PER is co-expressed with PDF. These cells build a complex arborization network throughout the brain and provide the perfect structure to convey time information to brain centers, where complex behavior, e.g. sun-compass orientation and time memory, is controlled. The PDF arborizations centralize in a dense network (we named it anterio-lobular PDF hub: ALO) which is located in front of the lobula. In other insects, this fiber center is associated with the medulla (accessory medulla: AME). Few PDF cells build the ALO already in very early larval development and the cell number and complexity of the network grows throughout honey bee development. Thereby, dorsal regions are innervated first by PDF fibers and, in late larval development, the fibers grow laterally to the optic lobe and central brain. The overall expression pattern of PER and PDF are similar in adult social and solitary bees, but I found a few differences in the PDF network density in the posterior protocerebrum and the lamina, which may be associated with evolution of sociality in bees. Secondly, I monitored activity rhythms, for which I developed and established a device to monitor locomotor activity rhythms of individual honey bees with contact to a mini colony in the laboratory. This revealed new aspects of social synchronization and survival of young bees with indirect social contact to the mini colony (no trophalaxis was possible). For mason bees, I established a method to monitor emergence and locomotor activity rhythms and I could show that circadian emergence rhythms are entrainable by daily temperature cycles. Furthermore, I present the first locomotor activity rhythms of solitary bees, which show strong circadian rhythms in their behavior right after emergence. Honey bees needed several days to develop circadian locomotor rhythms in my experiments. I hypothesized that honey bees do not emerge with a fully matured circadian system in the hive, while solitary bees, without the protection of a colony, would need a fully matured circadian clock right away after emergence. Several indices in published work and preliminary studies support my hypothesis and future studies on PDF expression in different developmental stages in solitary bees may provide hard evidence. N2 - Zusammenfassung Bienen, sowie viele andere Organismen, evolvierten eine innere circadiane Uhr, die es ihnen ermöglicht, tägliche Umweltveränderungen voraus zu sehen und ihre Foragierflüge zu Tageszeiten durchzuführen, wenn sie möglichst viele Blüten besuchen können. Es zeigte sich, dass der soziale Lebensstil der Honigbiene Einfluss auf das rhythmische Verhalten der Ammenbienen hat, die während der Brutpflege keinen täglichen Rhythmus im Verhalten aufweisen. Sammlerbienen auf der anderen Seite zeigen ein stark rhythmisches Verhalten. Solitäre Bienen, wie die Mauerbiene, betreiben keine Brutpflege und leben nicht in einer Staatengemeinschaft, aber sind den gleichen Umweltveränderungen ausgesetzt. Nicht nur Lebensstil, sondern auch Entwicklung und Lebenszyklus unterscheiden sich zwischen Honig- und Mauerbienen. Mauerbienen überwintern als adulte Insekten in einem Kokon bis sie im Frühjahr schlüpfen. Honigbienen durchleben keine Diapause und schlüpfen nach wenigen Wochen der Entwicklung im Bienenstock. In meiner Dissertation vergleiche ich die circadiane Uhr von sozialen Honigbienen (Apis mellifera) und solitären Mauerbienen (Osmia bicornis und Osmia cornuta) auf Ebene der Neuroanatomie und das durch die innere Uhr verursachte rhythmische Verhalten. Erstens charakterisierte ich detailliert die Lage der circadianen Uhr im Gehirn von Honig- und Mauerbiene anhand des Expressionsmusters von zwei Uhrkomponenten. Diese sind das Uhrprotein PERIOD (PER) und das Neuropeptid Pigment Dispersing Factor (PDF). PER wird exprimiert in lateralen Neuronen-Gruppen (die wir laterale Neurone 1 und 2 nannten: LN1 und LN2) und dorsalen Neuronen-Gruppen (benannt dorsal laterale Neurone und dorsale Neurone: DLN und DN), sowie in vielen Gliazellen und Fotorezeptorzellen. Dieses Expressionsmuster liegt ähnlich in anderen Insektengruppen vor und deutet auf einen Grundbauplan der Inneren Uhr im Gehirn von Insekten hin. In der LN2 Neuronen-Gruppe, deren Zellkörper im lateralen Gehirn liegen, sind PER und PDF in den gleichen Zellen co-lokalisiert. Diese Zellen bilden ein komplexes Netzwerk aus Verzweigungen durch das gesamte Gehirn und liefern damit die perfekte Infrastruktur, um Zeitinformation an Gehirnregionen weiterzuleiten, die komplexe Verhaltensweisen, wie Sonnenkompass-Orientierung und Zeitgedächtnis, steuern. Alle PDF Neuriten laufen in einer anterior zur Lobula liegenden Region zusammen (sie wurde ALO, anterio-lobular PDF Knotenpunkt, genannt). Dieser Knotenpunkt ist in anderen Insekten mit der Medulla assoziiert und wird akzessorische Medulla (AME) genannt. Wenige PDF Zellen bilden bereits im frühen Larvalstadium diesen ALO und die Zellzahl sowie die Komplexität des Netzwerks wächst die gesamte Entwicklung der Honigbiene hindurch. Dabei werden zuerst die dorsalen Gehirnregionen von PDF Neuronen innerviert und in der späteren Larvalentwicklung wachsen die Neurite lateral in Richtung der optischen Loben und des Zentralgehirns. Das generelle Expressionsmuster von PER und PDF in adulten sozialen und solitären Bienen ähnelt sich stark, aber ich identifizierte kleine Unterschiede in der PDF Netzwerkdichte im posterioren Protocerebrum und in der Lamina. Diese könnten mit der Evolution von sozialen Bienen assoziiert sein. Zweitens entwickelte und etablierte ich eine Methode, Lokomotionsrhythmen von individuellen Bienen im Labor aufzunehmen, die in Kontakt mit einem Miniaturvolk standen. Diese Methode enthüllte neue Aspekte der sozialen Synchronisation unter Honigbienen und des Überlebens von jungen Bienen, die indirekten sozialen Kontakt zu dem Miniaturvolk hatten (Trophalaxis war nicht möglich). Für Mauerbienen etablierte ich eine Methode Schlupf- und lokomotorische Aktivitätsrhythmik aufzuzeichnen und konnte damit zeigen, dass tägliche Rhythmen im Schlupf durch Synchronisation der circadianen Uhr in Mauerbienen durch Tagestemperatur-Zyklen erzielt werden kann. Des Weiteren präsentiere ich die ersten lokomotorischen Aktivitätsrhythmen von solitären Bienen, die sofort nach ihrem Schlupf einen starken circadianen Rhythmus im Verhalten aufwiesen. Honigbienen brauchten in meinen Experimenten mehrere Tage, um circadiane Rhythmen in Lokomotion zu entwickeln. Ich erstellte die Hypothese, dass Honigbienen zum Zeitpunkt des Schlupfes im Bienenvolk ein noch nicht vollständig ausgereiftes circadianes System besitzen, während solitäre Bienen, die ohne den Schutz eines Volkes sind, direkt nach dem Schlupf eine vollständig ausgereifte Uhr brauchen. Mehrere Hinweise in Publikationen und Vorversuchen unterstützen meine Hypothese. Zukünftige Studien der Entwicklung des PDF Neuronen-Netzwerkes in solitären Bienen unterschiedlicher Entwicklungsstufen könnten dies nachweisen. KW - Chronobiologie KW - circadian rhythms KW - honeybee KW - Mauerbiene KW - Neuroanatomie Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-159765 ER - TY - JOUR A1 - Peters, Simon A1 - Fohmann, Ingo A1 - Rudel, Thomas A1 - Schubert-Unkmeir, Alexandra T1 - A Comprehensive Review on the Interplay between Neisseria spp. and Host Sphingolipid Metabolites JF - Cells N2 - Sphingolipids represent a class of structural related lipids involved in membrane biology and various cellular processes including cell growth, apoptosis, inflammation and migration. Over the past decade, sphingolipids have become the focus of intensive studies regarding their involvement in infectious diseases. Pathogens can manipulate the sphingolipid metabolism resulting in cell membrane reorganization and receptor recruitment to facilitate their entry. They may recruit specific host sphingolipid metabolites to establish a favorable niche for intracellular survival and proliferation. In contrast, some sphingolipid metabolites can also act as a first line defense against bacteria based on their antimicrobial activity. In this review, we will focus on the strategies employed by pathogenic Neisseria spp. to modulate the sphingolipid metabolism and hijack the sphingolipid balance in the host to promote cellular colonization, invasion and intracellular survival. Novel techniques and innovative approaches will be highlighted that allow imaging of sphingolipid derivatives in the host cell as well as in the pathogen. KW - sphingolipids KW - host–pathogen interaction KW - Neisseria meningitidis KW - Neisseria gonorrhoeae Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-250203 SN - 2073-4409 VL - 10 IS - 11 ER - TY - JOUR A1 - Libre, Camille A1 - Seissler, Tanja A1 - Guerrero, Santiago A1 - Batisse, Julien A1 - Verriez, Cédric A1 - Stupfler, Benjamin A1 - Gilmer, Orian A1 - Cabrera-Rodriguez, Romina A1 - Weber, Melanie M. A1 - Valenzuela-Fernandez, Agustin A1 - Cimarelli, Andrea A1 - Etienne, Lucie A1 - Marquet, Roland A1 - Paillart, Jean-Christophe T1 - A conserved uORF regulates APOBEC3G translation and is targeted by HIV-1 Vif protein to repress the antiviral factor JF - Biomedicines N2 - The HIV-1 Vif protein is essential for viral fitness and pathogenicity. Vif decreases expression of cellular restriction factors APOBEC3G (A3G), A3F, A3D and A3H, which inhibit HIV-1 replication by inducing hypermutation during reverse transcription. Vif counteracts A3G at several levels (transcription, translation, and protein degradation) that altogether reduce the levels of A3G in cells and prevent its incorporation into viral particles. How Vif affects A3G translation remains unclear. Here, we uncovered the importance of a short conserved uORF (upstream ORF) located within two critical stem-loop structures of the 5′ untranslated region (5′-UTR) of A3G mRNA for this process. A3G translation occurs through a combination of leaky scanning and translation re-initiation and the presence of an intact uORF decreases the extent of global A3G translation under normal conditions. Interestingly, the uORF is also absolutely required for Vif-mediated translation inhibition and redirection of A3G mRNA into stress granules. Overall, we discovered that A3G translation is regulated by a small uORF conserved in the human population and that Vif uses this specific feature to repress its translation. KW - HIV-1 KW - APOBEC3G KW - Vif KW - mRNA KW - translation KW - uORF Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-252147 SN - 2227-9059 VL - 10 IS - 1 ER - TY - JOUR A1 - Haack, J. A1 - Hauck, C. A1 - Klingenberg, C. A1 - Pirner, M. A1 - Warnecke, S. T1 - A Consistent BGK Model with Velocity-Dependent Collision Frequency for Gas Mixtures JF - Journal of Statistical Physics N2 - We derive a multi-species BGK model with velocity-dependent collision frequency for a non-reactive, multi-component gas mixture. The model is derived by minimizing a weighted entropy under the constraint that the number of particles of each species, total momentum, and total energy are conserved. We prove that this minimization problem admits a unique solution for very general collision frequencies. Moreover, we prove that the model satisfies an H-Theorem and characterize the form of equilibrium. KW - plasma physics KW - multi-fluid mixture KW - kinetic model KW - BGK approximation KW - velocity-dependent collision frequency KW - entropy minimization Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-269146 SN - 1572-9613 VL - 184 IS - 3 ER - TY - JOUR A1 - Fakhri, Seyed Arvin A1 - Latifi, Hooman T1 - A consumer grade UAV-based framework to estimate structural attributes of coppice and high oak forest stands in semi-arid regions JF - Remote Sensing N2 - Semi-arid tree covers, in both high and coppice growth forms, play an essential role in protecting water and soil resources and provides multiple ecosystem services across fragile ecosystems. Thus, they require continuous inventories. Quantification of forest structure in these tree covers provides important measures for their management and biodiversity conservation. We present a framework, based on consumer-grade UAV photogrammetry, to separately estimate primary variables of tree height (H) and crown area (A) across diverse coppice and high stands dominated by Quercus brantii Lindl. along the latitudinal gradient of Zagros mountains of western Iran. Then, multivariate linear regressions were parametrized with H and A to estimate the diameter at breast height (DBH) of high trees because of its importance to accelerate the existing practical DBH inventories across Zagros Forests. The estimated variables were finally applied to a model tree aboveground biomass (AGB) for both vegetative growth forms by local allometric equations and Random Forest models. In each step, the estimated variables were evaluated against the field reference values, indicating practically high accuracies reaching root mean square error (RMSE) of 0.68 m and 4.74 cm for H and DBH, as well as relative RMSE < 10% for AGB estimates. The results generally suggest an effective framework for single tree-based attribute estimation over mountainous, semi-arid coppice, and high stands. KW - tree structure KW - biomass KW - DBH KW - Zagros Forests KW - Q. brantii Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-248469 SN - 2072-4292 VL - 13 IS - 21 ER - TY - JOUR A1 - Seibel, Sebastian A1 - Volmer, Judith T1 - A Diary Study on Anticipated Leisure Time, Morning Recovery, and Employees’ Work Engagement JF - International Journal of Environmental Research and Public Health N2 - Recovery during yesterday’s leisure time is beneficial for morning recovery, and morning recovery fosters employees’ work engagement, a positive, motivational state associated with job performance. We extended existing research by assuming that both, morning recovery (considered a resource) and anticipated leisure time (considered an anticipated resource gain), relate to work engagement. Anticipated leisure time comprises two constructs: general anticipation of leisure time, which refers to employees’ cognitive evaluation of their entire upcoming leisure time, and pleasant anticipation of a planned leisure activity, which describes a positive affective reaction because of one specific, upcoming leisure activity. We suggested that employees with high pleasant anticipation generate more thoughts of a planned leisure activity (ToPLA), which may distract them from their work, reducing their work engagement. A diary study over five days showed that morning recovery and general anticipation of leisure time were positively related to work engagement. Furthermore, employees with higher pleasant anticipation of a planned leisure activity reported more ToPLA. In contrast to our expectations, neither pleasant anticipation nor ToPLA was related to work engagement. In sum, this study introduced anticipated leisure time as a novel antecedent of work engagement and demonstrated that anticipated resource gains are important for high work engagement. KW - morning recovery KW - leisure time KW - pleasant anticipation KW - work engagement KW - thoughts of a planned leisure activity KW - diary study Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-246090 SN - 1660-4601 VL - 18 IS - 18 ER - TY - JOUR A1 - Eisenhuth, Nicole A1 - Vellmer, Tim A1 - Rauh, Elisa T. A1 - Butter, Falk A1 - Janzen, Christian J. T1 - A DOT1B/Ribonuclease H2 Protein Complex Is Involved in R-Loop Processing, Genomic Integrity, and Antigenic Variation in Trypanosoma brucei JF - mbio N2 - The parasite Trypanosoma brucei periodically changes the expression of protective variant surface glycoproteins (VSGs) to evade its host's immune sys-tem in a process known as antigenic variation. One route to change VSG expres-sion is the transcriptional activation of a previously silent VSG expression site (ES), a subtelomeric region containing the VSG genes. Homologous recombination of a different VSG from a large reservoir into the active ES represents another route. The conserved histone methyltransferase DOT1B is involved in transcriptional silencing of inactive ES and influences ES switching kinetics. The molecular machin-ery that enables DOT1B to execute these regulatory functions remains elusive, however. To better understand DOT1B-mediated regulatory processes, we purified DOT1B-associated proteins using complementary biochemical approaches. We iden-tified several novel DOT1B interactors. One of these was the RNase H2 complex, previously shown to resolve RNA-DNA hybrids, maintain genome integrity, and play a role in antigenic variation. Our study revealed that DOT1B depletion results in an increase in RNA-DNA hybrids, accumulation of DNA damage, and ES switch-ing events. Surprisingly, a similar pattern of VSG deregulation was observed in RNase H2 mutants. We propose that both proteins act together in resolving R-loops to ensure genome integrity and contribute to the tightly regulated process of anti-genic variation. KW - DOT1B KW - R-loop KW - antigenic variation KW - chromatin structure KW - genomic integrity Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-260698 VL - 12 IS - 6 ER - TY - JOUR A1 - Adolfi, Mateus C. A1 - Du, Kang A1 - Kneitz, Susanne A1 - Cabau, Cédric A1 - Zahm, Margot A1 - Klopp, Christophe A1 - Feron, Romain A1 - Paixão, Rômulo V. A1 - Varela, Eduardo S. A1 - de Almeida, Fernanda L. A1 - de Oliveira, Marcos A. A1 - Nóbrega, Rafael H. A1 - Lopez-Roques, Céline A1 - Iampietro, Carole A1 - Lluch, Jérôme A1 - Kloas, Werner A1 - Wuertz, Sven A1 - Schaefer, Fabian A1 - Stöck, Matthias A1 - Guiguen, Yann A1 - Schartl, Manfred T1 - A duplicated copy of id2b is an unusual sex-determining candidate gene on the Y chromosome of arapaima (Arapaima gigas) JF - Scientific Reports N2 - Arapaima gigas is one of the largest freshwater fish species of high ecological and economic importance. Overfishing and habitat destruction are severe threats to the remaining wild populations. By incorporating a chromosomal Hi-C contact map, we improved the arapaima genome assembly to chromosome-level, revealing an unexpected high degree of chromosome rearrangements during evolution of the bonytongues (Osteoglossiformes). Combining this new assembly with pool-sequencing of male and female genomes, we identified id2bbY, a duplicated copy of the inhibitor of DNA binding 2b (id2b) gene on the Y chromosome as candidate male sex-determining gene. A PCR-test for id2bbY was developed, demonstrating that this gene is a reliable male-specific marker for genotyping. Expression analyses showed that this gene is expressed in juvenile male gonads. Its paralog, id2ba, exhibits a male-biased expression in immature gonads. Transcriptome analyses and protein structure predictions confirm id2bbY as a prime candidate for the master sex-determiner. Acting through the TGF beta signaling pathway, id2bbY from arapaima would provide the first evidence for a link of this family of transcriptional regulators to sex determination. Our study broadens our current understanding about the evolution of sex determination genetic networks and provide a tool for improving arapaima aquaculture for commercial and conservation purposes. KW - evolutionary genetics KW - genetic markers KW - genome Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-265672 VL - 11 IS - 1 ER - TY - THES A1 - Blum, Carina T1 - A first step to an integral biointerface design for the early phase of regeneration T1 - Ein erster Schritt zur Etablierung eines integralen biologischen Grenzflächendesigns für die frühe Phase der Regeneration N2 - The implantation of any foreign material into the body automatically starts an immune reaction that serves as the first, mandatory step to regenerate tissue. The course of this initial immune reaction decides on the fate of the implant: either the biomaterial will be integrated into the host tissue to subsequently fulfill its intended function (e.g., tissue regeneration), or it will be repelled by fibrous encapsulation that determines the implant failure. Especially neutrophils and macrophages play major roles during this inflammatory response and hence mainly decide on the biomaterial's fate. For clinically relevant tissue engineering approaches, biomaterials may be designed in shape and morphology as well as in their surface functionality to improve the healing outcome, but also to trigger stem cell responses during the subsequent tissue regeneration phase. The main focus of this thesis was to unravel the influence of scaffold characteristics, including scaffold morphology and surface functionality, on primary human innate immune cells (neutrophils and macrophages) and human mesenchymal stromal cells (hMSCs) to assess their in vitro immune response and tissue regeneration capacity, respectively. The fiber-based constructs were produced either via melt electrowriting (MEW), when the precise control over scaffold morphology was required, or via solution electrospinning (ES), when the scaffold design could be neglected. All the fiber-based scaffolds used throughout this thesis were composed of the polymer poly(ε caprolactone) (PCL). A novel strategy to model and alleviate the first direct cell contact of the immune system with a peptide-bioactived fibrous material was presented in chapter 3 by treating the material with human neutrophil elastase (HNE) to imitate the neutrophil attack. The main focus of this study was put on the effect of HNE towards an RGDS-based peptide that was immobilized on the surface of a fibrous material to improve subsequent L929 cell adhesion. The elastase efficiently degraded the peptide-functionality, as evidenced by a decreased L929 cell adhesion, since the peptide integrated a specific HNE-cleavage site (AAPV-motif). A sacrificial hydrogel coating based on primary oxidized hyaluronic acid (proxHA), which dissolved within a few days after the neutrophil attack, provided an optimal protection of the peptide-bioactivated fibrous mesh, i.e, the hydrogel alleviated the neutrophil attack and largely ensured the biomaterial's integrity. Thus, according to these results, a means to protect the biomaterial is required to overcome the neutrophil attack. Chapter 4 was based on the advancement of melt electrowriting (MEW) to improve the printing resolution of MEW scaffolds in terms of minimal inter-fiber distances and a concomitant high stacking precision. Initially, to gain a better MEW understanding, the influence of several parameters, including spinneret diameter, applied pressure, and collector velocity on mechanical properties, crystallinity, fiber diameter and fiber surface morphology was analyzed. Afterward, innovative MEW designs (e.g., box-, triangle-, round , and wall-shaped scaffolds) have been established by pushing the printing parameters to their physical limits. Further, the inter-fiber distance within a standardized box-structured scaffold was successfully reduced to 40 µm, while simultaneously a high stacking precision was maintained. In collaboration with a co-worker of my department (Tina Tylek, who performed all cell-based experiments in this study), these novel MEW scaffolds have been proven to facilitate human monocyte-derived macrophage polarization towards the regenerative M2 type in an elongation-driven manner with a more pronounced effect with decreasing pore sizes. Finally, a pro-adipogenic platform for hMSCs was developed in chapter 5 using MEW scaffolds with immobilized, complex ECM proteins (e.g., human decellularized adipose tissue (DAT), laminin (LN), and fibronectin (FN)) to test for the adipogenic differentiation potential in vitro. Within this thesis, a special short-term adipogenic induction regime enabled to more thoroughly assess the intrinsic pro-adipogenic capacity of the composite biomaterials and prevented any possible masking by the commonly used long-term application of adipogenic differentiation reagents. The scaffolds with incorporated DAT consistently showed the highest adipogenic outcome and hence provided an adipo-inductive microenvironment for hMSCs, which holds great promise for applications in soft tissue regeneration. Future studies should combine all three addressed projects in a more in vivo-related manner, comprising a co-cultivation setup of neutrophils, macrophages, and MSCs. The MEW-scaffold, particularly due to its ability to combine surface functionality and adjustable morphology, has been proven to be a successful approach for wound healing and paves the way for subsequent tissue regeneration. N2 - Die Implantation eines Biomaterials löst stets eine Immunreaktion im Körper aus, die den ersten zwingenden Schritt zur Geweberegeneration darstellt. Der Verlauf dieser anfänglichen Immunreaktion entscheidet über das Schicksal des Implantats: Entweder wird das Biomaterial in das Wirtsgewebe integriert, um anschließend seine vorgesehene Funktion (z.B. Geweberegeneration) zu erfüllen, oder aber es findet eine Abstoßungsreaktion durch Einkapselung des Implantats statt. Insbesondere Neutrophile und Makrophagen spielen für die Immunantwort eine wichtige Rolle und entscheiden daher hauptsächlich über das Schicksal des Biomaterials. Für klinisch relevante Ansätze der Gewebezüchtung können Biomaterialien sowohl in ihrer Morphologie als auch in ihrer Oberflächenfunktionalität so gestaltet werden, dass sie zum einen die Wundheilung verbessern, zum anderen auch Stammzellreaktionen während der anschließenden Geweberegenerationsphase auslösen. Der Fokus dieser Doktorarbeit lag auf der Beurteilung des Einflusses von Morphologie und Oberflächenfunktionalität fasriger Scaffolds auf die frühe Phase der Geweberegeneration. Insbesondere wurde die in vitro-Immunantwort von primären humanen Immunzellen (Neutrophile und Makrophagen) sowie die Geweberegenerationskapazität von humanen mesenchymalen Stromazellen (hMSCs) untersucht. Die hierfür verwendeten faserbasierten Poly(ε-Caprolacton) (PCL) Scaffolds wurden entweder mittels Solution Electrospinning (ES) oder Melt Electrowriting (MEW) hergestellt. Während ES eine zufällig orientierte Faserablage zur Folge hat, erlaubt MEW eine präzise Kontrolle der Scaffold-Morphologie. Zunächst wurde eine neue Strategie zur Nachahmung und Abmilderung des ersten direkten Zellkontakts während der Immunreaktion vorgestellt. Dabei wurde die Interaktion zwischen Neutrophilen mit einem Peptid-bioaktivierten Fasermaterial untersucht (Kapitel 3), wobei der sog. Neutrophilen-Angriff mittels des Enzyms Neutrophilen Elastase (HNE) nachgeahmt wurde. Das an der Faseroberfläche immobilisierte CGGGAAPVGGRGDS-Peptid verfügte über eine spezifische HNE-Schnittstelle (AAPV-Motiv), an welcher die Elastase das Peptid effizient degradieren konnte. Das Degradationsverhalten des Enzyms wurde anschließend über L929 Zelladhärenz analysiert, welche über das RGDS-Motiv im Peptid vermittelt wurde. Im Rahmen der Arbeit konnte nachgewiesen werden, dass der Neutrophilen-Angriff und die damit einhergehende Verringerung des RGDS-Motivs zu einer reduzierten Zelladhärenz führte. Die Einbettung des Scaffolds in ein Hydrogel auf der Basis von Aldehyd-haltiger Hyaluronsäure (proxHA) bot während des Neutrophilen-Angriffs einen optimalen Schutz der Peptidfunktionalität. Um diese wiederum anschließend für Adhäsionsversuche verfügbar zu machen, konnte das Hydrogelsystem derartig eingestellt werden, dass sich dieses innerhalb weniger Tage auflöste. Auf diese Weise konnte das Hydrogel den Neutrophilen-Angriff abmildern und so die Integrität des Biomaterials weitestgehend gewährleisten. Kapitel 4 behandelt die Präzisierung der Faserablage, insbesondere die Verringerung des Faserabstands, während des MEW-Prozesses. Zunächst wurde der Einfluss verschiedener Parameter (Spinndüsendurchmesser, angelegter Luftdruck und Kollektorgeschwindigkeit) auf die mechanischen Eigenschaften, die Kristallinität, den Faserdurchmesser und die Faseroberflächenmorphologie analysiert. Durch Optimierung der Druckparameter konnten innovative MEW-Designs (u.a. mit runder Porengeometrie) gedruckt werden. Der Abstand zwischen den Fasern in einem Scaffold mit standardisierter kastenförmiger Porengeometrie wurde erfolgreich auf 40 µm reduziert, während gleichzeitig eine hohe Stapelpräzision gewährleistet wurde. In Zusammenarbeit mit einer Kollegin am Lehrstuhl (Tina Tylek, die alle zellbasierten Experimente in dieser Studie durchführte) wurde nachgewiesen, dass diese innovativen MEW-Scaffolds die Polarisierung menschlicher Makrophagen in Richtung des regenerativen M2-Typs förderten. Die Makrophagen-Polarisierung ging einher mit einer Zellelongation, wobei dieser Effekt verstärkt für kleinere Porengrößen auftrat. Abschließend stand die Untersuchung der pro-adipogenen Wirkung von faserfunktionalisierten MEW-Scaffolds im Fokus (Kapitel 5), welche mit ECM-Proteinen, wie beispielsweise dezellularisiertes Fettgewebe (DAT), beschichtet wurden. Das pro-adipogene Potential dieser Materialien wurde mit Hilfe einer adipogenen Kurzzeitinduktion näher analysiert, da eine Langzeitapplikation der Differenzierungsreagenzien diesen Effekt überdeckte. Die Scaffolds mit der DAT-Beschichtung zeigten durchweg die höchste adipogene Differenzierung und boten somit für Stammzellen eine adipo-induzierende Mikroumgebung, weshalb sie für die Anwendung in der Weichgeweberegeneration sehr vielversprechend sind. An diese Arbeit anschließende Experimente sollten alle drei Projekte in einem Co-Kulturansatz von Neutrophilen, Makrophagen und MSCs kombinieren, um so einen stärkeren in vivo-Bezug herzustellen. Hierfür erweist sich das MEW-Scaffold insbesondere durch seine Kombinationsfähigkeit der Oberflächenfunktionalität und Morphologie als Ansatz für einen erfolgreichen Wundheilungsprozess und ebnet damit den Weg für eine bestmögliche Geweberegeneration. KW - Scaffold KW - Biomaterial KW - tissue regeneration KW - melt electrowriting KW - Scaffold Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-212117 ER - TY - JOUR A1 - Luis, Werner A1 - Horrer, Günther A1 - Philipp, Michael A1 - Lubitz, Katharina A1 - Kuntze‐Fechner, Maximilian W. A1 - Radius, Udo T1 - A General Synthetic Route to NHC‐Phosphinidenes: NHC‐mediated Dehydrogenation of Primary Phosphines JF - Zeitschrift für anorganische und allgemeine Chemie N2 - The dehydrocoupling of primary phosphines with N-heterocyclic carbenes (NHCs) to yield NHC-phosphinidenes is reported. The reaction of two equivalents of the NHCs Me\(_2\)Im (1,3-dimethylimidazolin-2-ylidene), Me\(_4\)Im (1,3,4,5-tetramethylimidazolin-2-ylidene), iPr\(_2\)Im (1,3-di-iso-propylimidazolin-2-ylidene) and Mes\(_2\)Im (2,4,6-trimethylphenylimidazolin-2-ylidene) with PhPH\(_2\) and MesPH\(_2\) led to the NHC stabilized phosphinidenes (NHC)PAr: (iPr\(_2\)Im)PPh (1), (Mes\(_2\)Im)PPh (2), (Me\(_4\)Im)PPh (3), (Mes\(_2\)Im)PMes (4), (Me\(_2\)Im)PMes (5), (Me\(_4\)Im)PMes (6) and (iPr\(_2\)Im)PMes (7). The reaction of tBuPH\(_2\) with two equivalents of the NHCs afforded the corresponding NHC stabilized parent phosphinidenes (NHC)PH: (iPr\(_2\)Im)PH (8), (Mes\(_2\)Im)PH (9) and (Me\(_4\)Im)PH (10). Reaction of 1 with oxygen and sulfur led to isolation of iPr\(_2\)Im-P(O)\(_2\)Ph (11) and iPr\(_2\)Im-P(S)\(_2\)Ph (12), whereas the reaction with elemental selenium and tellurium gave (NHC)PPh cleavage with formation of (iPr\(_2\)Im)Se (13), iPr\(_2\)ImTe (14) and different cyclo-oligophosphines. Furthermore, the complexes [{(iPr\(_2\)Im)PPh}W(CO)\(_5\)] (15), [Co(CO)\(_2\)(NO){(iPr\(_2\)Im)PPh}] (16) and [(η\(^5\)-C\(_5\)Me\(_2\))Co(η\(^2\)-C\(_2\)H\(_4\)){(iPr\(_2\)Im)PPh}] (17) have been prepared starting from 1 and a suitable transition metal complex precursor. The complexes 16 and 17 decompose in solution upon heating to ca. 80 °C to yield the NHC complexes [Co(iPr\(_2\)Im)(CO)\(_2\)(NO)] and [(η\(^5\)-C\(_5\)Me\(_5\))Co(iPr\(_2\)Im)(η\(^2\)-C\(_2\)H\(_4\))] with formation of cyclo-oligophosphines. The reaction of 1 with [Ni(COD)\(_2\)] afforded the diphosphene complex [Ni(iPr\(_2\)Im)\(_2\)(trans-PhP=PPh)] 18. KW - transition metal complexes KW - N-heterocyclic carbenes KW - phosphinidenes KW - dehydrocoupling Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-258016 VL - 647 IS - 8 ER - TY - JOUR A1 - Gerova, Milan A1 - Wicke, Laura A1 - Chihara, Kotaro A1 - Schneider, Cornelius A1 - Lavigne, Rob A1 - Vogel, Jörg T1 - A grad-seq view of RNA and protein complexes in Pseudomonas aeruginosa under standard and bacteriophage predation conditions JF - mbio N2 - The Gram-negative rod-shaped bacterium Pseudomonas aeruginosa is not only a major cause of nosocomial infections but also serves as a model species of bacterial RNA biology. While its transcriptome architecture and posttranscriptional regulation through the RNA-binding proteins Hfq, RsmA, and RsmN have been studied in detail, global information about stable RNA-protein complexes in this human pathogen is currently lacking. Here, we implement gradient profiling by sequencing (Grad-seq) in exponentially growing P. aeruginosa cells to comprehensively predict RNA and protein complexes, based on glycerol gradient sedimentation profiles of >73% of all transcripts and ∼40% of all proteins. As to benchmarking, our global profiles readily reported complexes of stable RNAs of P. aeruginosa, including 6S RNA with RNA polymerase and associated product RNAs (pRNAs). We observe specific clusters of noncoding RNAs, which correlate with Hfq and RsmA/N, and provide a first hint that P. aeruginosa expresses a ProQ-like FinO domain-containing RNA-binding protein. To understand how biological stress may perturb cellular RNA/protein complexes, we performed Grad-seq after infection by the bacteriophage ΦKZ. This model phage, which has a well-defined transcription profile during host takeover, displayed efficient translational utilization of phage mRNAs and tRNAs, as evident from their increased cosedimentation with ribosomal subunits. Additionally, Grad-seq experimentally determines previously overlooked phage-encoded noncoding RNAs. Taken together, the Pseudomonas protein and RNA complex data provided here will pave the way to a better understanding of RNA-protein interactions during viral predation of the bacterial cell. IMPORTANCE Stable complexes by cellular proteins and RNA molecules lie at the heart of gene regulation and physiology in any bacterium of interest. It is therefore crucial to globally determine these complexes in order to identify and characterize new molecular players and regulation mechanisms. Pseudomonads harbor some of the largest genomes known in bacteria, encoding ∼5,500 different proteins. Here, we provide a first glimpse on which proteins and cellular transcripts form stable complexes in the human pathogen Pseudomonas aeruginosa. We additionally performed this analysis with bacteria subjected to the important and frequently encountered biological stress of a bacteriophage infection. We identified several molecules with established roles in a variety of cellular pathways, which were affected by the phage and can now be explored for their role during phage infection. Most importantly, we observed strong colocalization of phage transcripts and host ribosomes, indicating the existence of specialized translation mechanisms during phage infection. All data are publicly available in an interactive and easy to use browser. KW - Grad-seq KW - Pseudomonas KW - UKZ KW - bacteriophage KW - infection KW - Pseudomonas aeruginosa KW - RNA-binding proteins KW - noncoding RNA KW - phage Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-259054 VL - 12 IS - 1 ER - TY - JOUR A1 - Latifi, Hooman A1 - Holzwarth, Stefanie A1 - Skidmore, Andrew A1 - Brůna, Josef A1 - Červenka, Jaroslav A1 - Darvishzadeh, Roshanak A1 - Hais, Martin A1 - Heiden, Uta A1 - Homolová, Lucie A1 - Krzystek, Peter A1 - Schneider, Thomas A1 - Starý, Martin A1 - Wang, Tiejun A1 - Müller, Jörg A1 - Heurich, Marco T1 - A laboratory for conceiving Essential Biodiversity Variables (EBVs)—The ‘Data pool initiative for the Bohemian Forest Ecosystem’ JF - Methods in Ecology and Evolution N2 - Effects of climate change‐induced events on forest ecosystem dynamics of composition, function and structure call for increased long‐term, interdisciplinary and integrated research on biodiversity indicators, in particular within strictly protected areas with extensive non‐intervention zones. The long‐established concept of forest supersites generally relies on long‐term funds from national agencies and goes beyond the logistic and financial capabilities of state‐ or region‐wide protected area administrations, universities and research institutes. We introduce the concept of data pools as a smaller‐scale, user‐driven and reasonable alternative to co‐develop remote sensing and forest ecosystem science to validated products, biodiversity indicators and management plans. We demonstrate this concept with the Bohemian Forest Ecosystem Data Pool, which has been established as an interdisciplinary, international data pool within the strictly protected Bavarian Forest and Šumava National Parks and currently comprises 10 active partners. We demonstrate how the structure and impact of the data pool differs from comparable cases. We assessed the international influence and visibility of the data pool with the help of a systematic literature search and a brief analysis of the results. Results primarily suggest an increase in the impact and visibility of published material during the life span of the data pool, with highest visibilities achieved by research conducted on leaf traits, vegetation phenology and 3D‐based forest inventory. We conclude that the data pool results in an efficient contribution to the concept of global biodiversity observatory by evolving towards a training platform, functioning as a pool of data and algorithms, directly communicating with management for implementation and providing test fields for feasibility studies on earth observation missions. KW - bohemian forest ecosystem KW - data pool KW - forest ecosystem science KW - remote sensing KW - remote sensing‐enabled essential biodiversity variables Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-262743 VL - 12 IS - 11 ER - TY - JOUR A1 - Gerhard-Hartmann, Elena A1 - Wiegering, Verena A1 - Benoit, Clemens A1 - Meyer, Thomas A1 - Rosenwald, Andreas A1 - Maurus, Katja A1 - Ernestus, Karen T1 - A large retroperitoneal lipoblastoma as an incidental finding: a case report JF - BMC Pediatrics N2 - Background Lipoblastoma is a rare benign mesenchymal neoplasm of infancy that most commonly occurs on the extremities and trunk but can arise at variable sites of the body. Retroperitoneal lipoblastomas are particularly rare but can grow to enormous size, and preoperative diagnosis is difficult with diverse, mostly malignant differential diagnoses that would lead to aggressive therapy. Since lipoblastoma is a benign tumor that has an excellent prognosis after resection, correct diagnosis is crucial. Case presentation A case of a large retroperitoneal tumor of a 24-month old infant that was clinically suspicious of a malignant tumor is presented. Due to proximity to the right kidney, clinically most probably a nephroblastoma or clear cell sarcoma of the kidney was suspected. Radiological findings were ambiguous. Therefore, the mass was biopsied, and histology revealed an adipocytic lesion. Although mostly composed of mature adipocytes, in view of the age of the patient, the differential diagnosis of a (maturing) lipoblastoma was raised, which was supported by molecular analysis demonstrating a HAS2-PLAG1 fusion. The tumor was completely resected, and further histopathological workup led to the final diagnosis of a 13 cm large retroperitoneal maturing lipoblastoma. The child recovered promptly from surgery and showed no evidence of recurrence so far. Conclusion Although rare, lipoblastoma should be included in the differential diagnoses of retroperitoneal tumors in infants and children, and molecular diagnostic approaches could be a helpful diagnostic adjunct in challenging cases. KW - retroperitoneal tumor KW - pediatric KW - lipoblastoma KW - PLAG1 rearrangement KW - case report Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-260173 VL - 21 ER - TY - JOUR A1 - Rother, Lisa A1 - Kraft, Nadine A1 - Smith, Dylan B. A1 - El Jundi, Basil A1 - Gill, Richard J. A1 - Pfeiffer, Keram T1 - A micro-CT-based standard brain atlas of the bumblebee JF - Cell and Tissue Research N2 - In recent years, bumblebees have become a prominent insect model organism for a variety of biological disciplines, particularly to investigate learning behaviors as well as visual performance. Understanding these behaviors and their underlying neurobiological principles requires a clear understanding of brain anatomy. Furthermore, to be able to compare neuronal branching patterns across individuals, a common framework is required, which has led to the development of 3D standard brain atlases in most of the neurobiological insect model species. Yet, no bumblebee 3D standard brain atlas has been generated. Here we present a brain atlas for the buff-tailed bumblebee Bombus terrestris using micro-computed tomography (micro-CT) scans as a source for the raw data sets, rather than traditional confocal microscopy, to produce the first ever micro-CT-based insect brain atlas. We illustrate the advantages of the micro-CT technique, namely, identical native resolution in the three cardinal planes and 3D structure being better preserved. Our Bombus terrestris brain atlas consists of 30 neuropils reconstructed from ten individual worker bees, with micro-CT allowing us to segment neuropils completely intact, including the lamina, which is a tissue structure often damaged when dissecting for immunolabeling. Our brain atlas can serve as a platform to facilitate future neuroscience studies in bumblebees and illustrates the advantages of micro-CT for specific applications in insect neuroanatomy. KW - neuropils KW - Bombus terrestris KW - insect standard brain atlas KW - iterative shape averaging KW - reconstruction Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-267783 SN - 1432-0878 VL - 386 IS - 1 ER - TY - JOUR A1 - Ye, Mingyu A1 - Wilhelm, Martina A1 - Gentschev, Ivaylo A1 - Szalay, Aladár T1 - A modified limiting dilution method for monoclonal stable cell line selection using a real-time fluorescence imaging system: A practical workflow and advanced applications JF - Methods and Protocols N2 - Stable cell lines are widely used in laboratory research and pharmaceutical industry. They are mainly applied in recombinant protein and antibody productions, gene function studies, drug screens, toxicity assessments, and for cancer therapy investigation. There are two types of cell lines, polyclonal and monoclonal origin, that differ regarding their homogeneity and heterogeneity. Generating a high-quality stable cell line, which can grow continuously and carry a stable genetic modification without alteration is very important for most studies, because polyclonal cell lines of multicellular origin can be highly variable and unstable and lead to inconclusive experimental results. The most commonly used technologies of single cell originate monoclonal stable cell isolation in laboratory are fluorescence-activated cell sorting (FACS) sorting and limiting dilution cloning. Here, we describe a modified limiting dilution method of monoclonal stable cell line selection using the real-time fluorescence imaging system IncuCyte\(^®\)S3. KW - monoclonal stable cell KW - limiting dilution cloning KW - ncuCyte\(^®\)S3 Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-228896 VL - 4 IS - 1 ER - TY - JOUR A1 - Canu, Letizia A1 - Puglisi, Soraya A1 - Berchialla, Paola A1 - De Filpo, Giuseppina A1 - Brignardello, Francesca A1 - Schiavi, Francesca A1 - Ferrara, Alfonso Massimiliano A1 - Zovato, Stefania A1 - Luconi, Michaela A1 - Pia, Anna A1 - Appetecchia, Marialuisa A1 - Arvat, Emanuela A1 - Letizia, Claudio A1 - Maccario, Mauro A1 - Parasiliti-Caprino, Mirko A1 - Altieri, Barbara A1 - Faggiano, Antongiulio A1 - Modica, Roberta A1 - Morelli, Valentina A1 - Arosio, Maura A1 - Verga, Uberta A1 - Pellegrino, Micaela A1 - Petramala, Luigi A1 - Concistrè, Antonio A1 - Razzore, Paola A1 - Ercolino, Tonino A1 - Rapizzi, Elena A1 - Maggi, Mario A1 - Stigliano, Antonio A1 - Burrello, Jacopo A1 - Terzolo, Massimo A1 - Opocher, Giuseppe A1 - Mannelli, Massimo A1 - Reimondo, Giuseppe T1 - A multicenter epidemiological study on second malignancy in non-syndromic pheochromocytoma/paraganglioma patients in Italy JF - Cancers N2 - No studies have carried out an extensive analysis of the possible association between non-syndromic pheochromocytomas and paragangliomas (PPGLs) and other malignancies. To assess >the risk of additional malignancy in PPGL, we retrospectively evaluated 741 patients with PPGLs followed-up in twelve referral centers in Italy. Incidence of second malignant tumors was compared between this cohort and Italian patients with two subsequent malignancies. Among our patients, 95 (12.8%) developed a second malignant tumor, which were mainly prostate, colorectal and lung/bronchial cancers in males, breast cancer, differentiated thyroid cancer and melanoma in females. The standardized incidence ratio was 9.59 (95% CI 5.46–15.71) in males and 13.21 (95% CI 7.52–21.63) in females. At multivariable analysis, the risk of developing a second malignant tumor increased with age at diagnosis (HR 2.50, 95% CI 1.15–5.44, p = 0.021 for 50–59 vs. <50-year category; HR 3.46, 95% CI 1.67–7.15, p < 0.001 for >60- vs. <50-year). In patients with available genetic evaluation, a positive genetic test was inversely associated with the risk of developing a second tumor (HR 0.25, 95% CI 0.10–0.63, p = 0.003). In conclusion, PPGLs patients have higher incidence of additional malignant tumors compared to the general population who had a first malignancy, which could have an impact on the surveillance strategy. KW - pheochromocytoma KW - paraganglioma KW - epidemiology KW - genetic analysis KW - mortality KW - surveillance Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-250148 SN - 2072-6694 VL - 13 IS - 22 ER - TY - JOUR A1 - Tran-Gia, Johannes A1 - Denis-Bacelar, Ana M. A1 - Ferreira, Kelley M. A1 - Robinson, Andrew P. A1 - Calvert, Nicholas A1 - Fenwick, Andrew J. A1 - Finocchiaro, Domenico A1 - Fioroni, Federica A1 - Grassi, Elisa A1 - Heetun, Warda A1 - Jewitt, Stephanie J. A1 - Kotzassarlidou, Maria A1 - Ljungberg, Michael A1 - McGowan, Daniel R. A1 - Scott, Nathaniel A1 - Scuffham, James A1 - Gleisner, Katarina Sjögreen A1 - Tipping, Jill A1 - Wevrett, Jill A1 - Lassmann, Michael T1 - A multicentre and multi-national evaluation of the accuracy of quantitative Lu-177 SPECT/CT imaging performed within the MRTDosimetry project JF - EJNMMI Physics N2 - Purpose Patient-specific dosimetry is required to ensure the safety of molecular radiotherapy and to predict response. Dosimetry involves several steps, the first of which is the determination of the activity of the radiopharmaceutical taken up by an organ/lesion over time. As uncertainties propagate along each of the subsequent steps (integration of the time–activity curve, absorbed dose calculation), establishing a reliable activity quantification is essential. The MRTDosimetry project was a European initiative to bring together expertise in metrology and nuclear medicine research, with one main goal of standardizing quantitative \(^{177}\)Lu SPECT/CT imaging based on a calibration protocol developed and tested in a multicentre inter-comparison. This study presents the setup and results of this comparison exercise. Methods The inter-comparison included nine SPECT/CT systems. Each site performed a set of three measurements with the same setup (system, acquisition and reconstruction): (1) Determination of an image calibration for conversion from counts to activity concentration (large cylinder phantom), (2) determination of recovery coefficients for partial volume correction (IEC NEMA PET body phantom with sphere inserts), (3) validation of the established quantitative imaging setup using a 3D printed two-organ phantom (ICRP110-based kidney and spleen). In contrast to previous efforts, traceability of the activity measurement was required for each participant, and all participants were asked to calculate uncertainties for their SPECT-based activities. Results Similar combinations of imaging system and reconstruction lead to similar image calibration factors. The activity ratio results of the anthropomorphic phantom validation demonstrate significant harmonization of quantitative imaging performance between the sites with all sites falling within one standard deviation of the mean values for all inserts. Activity recovery was underestimated for total kidney, spleen, and kidney cortex, while it was overestimated for the medulla. Conclusion This international comparison exercise demonstrates that harmonization of quantitative SPECT/CT is feasible when following very specific instructions of a dedicated calibration protocol, as developed within the MRTDosimetry project. While quantitative imaging performance demonstrates significant harmonization, an over- and underestimation of the activity recovery highlights the limitations of any partial volume correction in the presence of spill-in and spill-out between two adjacent volumes of interests. KW - quantitative SPECT/CT KW - 177Lu SPECT/CT imaging KW - standardization of SPECT/CT imaging KW - harmonization of SPECT/CT imaging KW - international multicenter comparison exercise KW - traceability of SPECT/CT imaging KW - molecular radiotherapy (MRT) KW - 3D printing KW - phantom Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-270380 VL - 8 ER - TY - JOUR A1 - Peseschkian, Tara A1 - Cordts, Isabell A1 - Günther, René A1 - Stolte, Benjamin A1 - Zeller, Daniel A1 - Schröter, Carsten A1 - Weyen, Ute A1 - Regensburger, Martin A1 - Wolf, Joachim A1 - Schneider, Ilka A1 - Hermann, Andreas A1 - Metelmann, Moritz A1 - Kohl, Zacharias A1 - Linker, Ralf A. A1 - Koch, Jan Christoph A1 - Büchner, Boriana A1 - Weiland, Ulrike A1 - Schönfelder, Erik A1 - Heinrich, Felix A1 - Osmanovic, Alma A1 - Klopstock, Thomas A1 - Dorst, Johannes A1 - Ludolph, Albert C. A1 - Boentert, Matthias A1 - Hagenacker, Tim A1 - Deschauer, Marcus A1 - Lingor, Paul A1 - Petri, Susanne A1 - Schreiber-Katz, Olivia T1 - A nation-wide, multi-center study on the quality of life of ALS patients in Germany JF - Brain Sciences N2 - Improving quality of life (QoL) is central to amyotrophic lateral sclerosis (ALS) treatment. This Germany-wide, multicenter cross-sectional study analyses the impact of different symptom-specific treatments and ALS variants on QoL. Health-related QoL (HRQoL) in 325 ALS patients was assessed using the Amyotrophic Lateral Sclerosis Assessment Questionnaire 5 (ALSAQ-5) and EuroQol Five Dimension Five Level Scale (EQ-5D-5L), together with disease severity (captured by the revised ALS Functional Rating Scale (ALSFRS-R)) and the current care and therapies used by our cohort. At inclusion, the mean ALSAQ-5 total score was 56.93 (max. 100, best = 0) with a better QoL associated with a less severe disease status (β = −1.96 per increase of one point in the ALSFRS-R score, p < 0.001). “Limb-onset” ALS (lALS) was associated with a better QoL than “bulbar-onset” ALS (bALS) (mean ALSAQ-5 total score 55.46 versus 60.99, p = 0.040). Moreover, with the ALSFRS-R as a covariate, using a mobility aid (β = −7.60, p = 0.001), being tracheostomized (β = −14.80, p = 0.004) and using non-invasive ventilation (β = −5.71, p = 0.030) were associated with an improved QoL, compared to those at the same disease stage who did not use these aids. In contrast, antidepressant intake (β = 5.95, p = 0.007), and increasing age (β = 0.18, p = 0.023) were predictors of worse QoL. Our results showed that the ALSAQ-5 was better-suited for ALS patients than the EQ-5D-5L. Further, the early and symptom-specific clinical management and supply of assistive devices can significantly improve the individual HRQoL of ALS patients. Appropriate QoL questionnaires are needed to monitor the impact of treatment to provide the best possible and individualized care. KW - Amyotrophic Lateral Sclerosis (ALS) KW - Amyotrophic Lateral Sclerosis Assessment Questionnaire 5 (ALSAQ-5) KW - ALS treatment KW - “bulbar-onset” ALS (bALS) KW - “limb-onset” ALS (lALS) KW - EuroQol Five Dimension Five Level Scale (EQ-5D-5L) KW - health-related quality of life (HRQoL) KW - quality of life (QoL) KW - symptom-specific treatment KW - assistive devices Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-234147 SN - 2076-3425 VL - 11 IS - 3 ER - TY - JOUR A1 - Czernetzki, Corinna A1 - Arrowsmith, Merle A1 - Fantuzzi, Felipe A1 - Gärtner, Annalena A1 - Tröster, Tobias A1 - Krummenacher, Ivo A1 - Schorr, Fabian A1 - Braunschweig, Holger T1 - A neutral beryllium(I) radical JF - Angewandte Chemie International Edition N2 - The reduction of a cyclic alkyl(amino)carbene (CAAC)-stabilized organoberyllium chloride yields the first neutral beryllium radical, which was characterized by EPR, IR, UV/Vis spectroscopy and X-ray crystallography. DFT calculations show significant spin density at beryllium and confirm donor–acceptor bonding between an alkylberyllium radical fragment and a neutral CAAC ligand. KW - inorganic chemistry KW - X-ray crystallography KW - Beryllium KW - cyclic alkyl(amino)carbene KW - EDA-NOCV KW - radical Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-256529 VL - 60 IS - 38 ER - TY - RPRT A1 - Dandekar, Thomas T1 - A new cosmology of a crystallization process (decoherence) from the surrounding quantum soup provides heuristics to unify general relativity and quantum physics by solid state physics T1 - Eine neue Kosmologie eines Kristallisationsprozesses (Dekohärenz) vom umgebenden Quantenschaum bietet Heuristiken, um allgemeine Relativitätstheorie und Quantenphysik durch Festkörperphysik zu vereinen N2 - We explore a cosmology where the Big Bang singularity is replaced by a condensation event of interacting strings. We study the transition from an uncontrolled, chaotic soup (“before”) to a clearly interacting “real world”. Cosmological inflation scenarios do not fit current observations and are avoided. Instead, long-range interactions inside this crystallization event limit growth and crystal symmetries ensure the same laws of nature and basic symmetries over our domain. Tiny mis-arrangements present nuclei of superclusters and galaxies and crystal structure leads to the arrangement of dark (halo regions) and normal matter (galaxy nuclei) so convenient for galaxy formation. Crystals come and go, allowing an evolutionary cosmology where entropic forces from the quantum soup “outside” of the crystal try to dissolve it. These would correspond to dark energy and leads to a big rip scenario in 70 Gy. Preference of crystals with optimal growth and most condensation nuclei for the next generation of crystals may select for multiple self-organizing processes within the crystal, explaining “fine-tuning” of the local “laws of nature” (the symmetry relations formed within the crystal, its “unit cell”) to be particular favorable for self-organizing processes including life or even conscious observers in our universe. Independent of cosmology, a crystallization event may explain quantum-decoherence in general: The fact, that in our macroscopic everyday world we only see one reality. This contrasts strongly with the quantum world where you have coherence, a superposition of all quantum states. We suggest that a “real world” (so our everyday macroscopic world) happens only in our domain, i.e. inside a crystal. “Outside” of our domain and our observable universe there is the quantum soup of boiling quantum foam and superposition of all possibilities. In our crystallized world the vacuum no longer boils but is cooled down by the crystallization event and hence is 10**20 smaller, exactly as observed in our everyday world. As we live in a “solid” state, within a crystal, the different quanta which build our world have all their different states nicely separated. This theory postulates there are only n quanta and m states available for them (there is no Everett-like ever splitting multiverse after each decision). In the solid state we live in, there is decoherence, the states are nicely separated. The arrow of entropy for each edge of the crystal forms one fate, one worldline or clear development of a world, while the layers of the crystal are different system states. Some mathematical leads from loop quantum gravity point to required interactions and potentials. A complete mathematical treatment of this unified theory is far too demanding currently. Interaction potentials for strings or membranes of any dimension allow a solid state of quanta, so allowing decoherence in our observed world are challenging to calculate. However, if we introduce here the heuristic that any type of physical interaction of strings corresponds just to a type of calculation, there is already since 1898 the Hurwitz theorem showing that then only 1D, 2D, 4D and 8D (octonions) allow complex or hypercomplex number calculations. No other hypercomplex numbers and hence dimensions or symmetries are possible to allow calculations without yielding divisions by zero. However, the richest solution allowed by the Hurwitz theorem, octonions, is actually the observed symmetry of our universe, E8.   KW - Kosmologie KW - cosmology KW - Hurwitz-Theorem KW - Quantenschleifen-Gravitation KW - Verschränkung KW - Qubits KW - Hurwitz-Theorem KW - loop quantum gravity KW - entanglement KW - Qubits Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-230769 ER - TY - JOUR A1 - Rogers, Bruce A1 - Giles, David A1 - Draper, Nick A1 - Hoos, Olaf A1 - Gronwald, Thomas T1 - A New Detection Method Defining the Aerobic Threshold for Endurance Exercise and Training Prescription Based on Fractal Correlation Properties of Heart Rate Variability JF - Frontiers in Physiology N2 - The short-term scaling exponent alpha1 of detrended fluctuation analysis (DFA a1), a nonlinear index of heart rate variability (HRV) based on fractal correlation properties, has been shown to steadily change with increasing exercise intensity. To date, no study has specifically examined using the behavior of this index as a method for defining a low intensity exercise zone. The aim of this report is to compare both oxygen intake (VO\(_{2}\)) and heart rate (HR) reached at the first ventilatory threshold (VT1), a well-established delimiter of low intensity exercise, to those derived from a predefined DFA a1 transitional value. Gas exchange and HRV data were obtained from 15 participants during an incremental treadmill run. Comparison of both VO\(_{2}\) and HR reached at VT1 defined by gas exchange (VT1 GAS) was made to those parameters derived from analysis of DFA a1 reaching a value of 0.75 (HRVT). Based on Bland Altman analysis, linear regression, intraclass correlation (ICC) and t testing, there was strong agreement between VT1 GAS and HRVT as measured by both HR and VO\(_{2}\). Mean VT1 GAS was reached at 39.8 ml/kg/min with a HR of 152 bpm compared to mean HRVT which was reached at 40.1 ml/kg/min with a HR of 154 bpm. Strong linear relationships were seen between test modalities, with Pearson’s r values of 0.99 (p < 0.001) and.97 (p < 0.001) for VO\(_{2}\) and HR comparisons, respectively. Intraclass correlation between VT1 GAS and HRVT was 0.99 for VO\(_{2}\) and 0.96 for HR. In addition, comparison of VT1 GAS and HRVT showed no differences by t testing, also supporting the method validity. In conclusion, it appears that reaching a DFA a1 value of 0.75 on an incremental treadmill test is closely associated with crossing the first ventilatory threshold. As training intensity below the first ventilatory threshold is felt to have great importance for endurance sport, utilization of DFA a1 activity may provide guidance for a valid low training zone. KW - detrended fluctuation analysis KW - ventilatory threshold KW - aerobic threshold KW - intensity distribution KW - intensity zones KW - endurance exercise KW - endurance training KW - polarized training Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-222601 SN - 1664-042X VL - 11 ER - TY - JOUR A1 - Walter, Thomas A1 - Degen, Jacqueline A1 - Pfeiffer, Keram A1 - Stöckl, Anna A1 - Montenegro, Sergio A1 - Degen, Tobias T1 - A new innovative real-time tracking method for flying insects applicable under natural conditions JF - BMC Zoology N2 - Background Sixty percent of all species are insects, yet despite global efforts to monitor animal movement patterns, insects are continuously underrepresented. This striking difference between species richness and the number of species monitored is not due to a lack of interest but rather to the lack of technical solutions. Often the accuracy and speed of established tracking methods is not high enough to record behavior and react to it experimentally in real-time, which applies in particular to small flying animals. Results Our new method of real-time tracking relates to frequencies of solar radiation which are almost completely absorbed by traveling through the atmosphere. For tracking, photoluminescent tags with a peak emission (1400 nm), which lays in such a region of strong absorption through the atmosphere, were attached to the animals. The photoluminescent properties of passivated lead sulphide quantum dots were responsible for the emission of light by the tags and provide a superb signal-to noise ratio. We developed prototype markers with a weight of 12.5 mg and a diameter of 5 mm. Furthermore, we developed a short wave infrared detection system which can record and determine the position of an animal in a heterogeneous environment with a delay smaller than 10 ms. With this method we were able to track tagged bumblebees as well as hawk moths in a flight arena that was placed outside on a natural meadow. Conclusion Our new method eliminates the necessity of a constant or predictable environment for many experimental setups. Furthermore, we postulate that the developed matrix-detector mounted to a multicopter will enable tracking of small flying insects, over medium range distances (>1000m) in the near future because: a) the matrix-detector equipped with an 70 mm interchangeable lens weighs less than 380 g, b) it evaluates the position of an animal in real-time and c) it can directly control and communicate with electronic devices. KW - natural environment KW - insect tracking KW - real-time KW - movement ecology KW - heterogeneous background Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-265716 VL - 6 ER - TY - JOUR A1 - Kölligan, Daniel T1 - A note on Vedic cīti- JF - Indogermanische Forschungen N2 - Vedic cīti-, attested in the Atharvaveda, is argued to be related to Av. ṣ̌āitī-, OP šiyāti- ‘happiness’ built to PIE *kʷi̯eh₁- ‘to (come to) rest’. KW - Vedic KW - Atharvaveda KW - disease KW - healing KW - etymology Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-250986 SN - 1613-0405 SN - 0019-7262 N1 - This publication is with permission of the rights owner freely accessible due to an Alliance licence and a national licence (funded by the DFG, German Research Foundation) respectively. VL - 126 IS - 1 SP - 135 EP - 140 ER - TY - JOUR A1 - Dirscherl, Mariel A1 - Dietz, Andreas J. A1 - Kneisel, Christof A1 - Kuenzer, Claudia T1 - A novel method for automated supraglacial lake mapping in Antarctica using Sentinel-1 SAR imagery and deep learning JF - Remote Sensing N2 - Supraglacial meltwater accumulation on ice sheets can be a main driver for accelerated ice discharge, mass loss, and global sea-level-rise. With further increasing surface air temperatures, meltwater-induced hydrofracturing, basal sliding, or surface thinning will cumulate and most likely trigger unprecedented ice mass loss on the Greenland and Antarctic ice sheets. While the Greenland surface hydrological network as well as its impacts on ice dynamics and mass balance has been studied in much detail, Antarctic supraglacial lakes remain understudied with a circum-Antarctic record of their spatio-temporal development entirely lacking. This study provides the first automated supraglacial lake extent mapping method using Sentinel-1 synthetic aperture radar (SAR) imagery over Antarctica and complements the developed optical Sentinel-2 supraglacial lake detection algorithm presented in our companion paper. In detail, we propose the use of a modified U-Net for semantic segmentation of supraglacial lakes in single-polarized Sentinel-1 imagery. The convolutional neural network (CNN) is implemented with residual connections for optimized performance as well as an Atrous Spatial Pyramid Pooling (ASPP) module for multiscale feature extraction. The algorithm is trained on 21,200 Sentinel-1 image patches and evaluated in ten spatially or temporally independent test acquisitions. In addition, George VI Ice Shelf is analyzed for intra-annual lake dynamics throughout austral summer 2019/2020 and a decision-level fused Sentinel-1 and Sentinel-2 maximum lake extent mapping product is presented for January 2020 revealing a more complete supraglacial lake coverage (~770 km\(^2\)) than the individual single-sensor products. Classification results confirm the reliability of the proposed workflow with an average Kappa coefficient of 0.925 and a F\(_1\)-score of 93.0% for the supraglacial water class across all test regions. Furthermore, the algorithm is applied in an additional test region covering supraglacial lakes on the Greenland ice sheet which further highlights the potential for spatio-temporal transferability. Future work involves the integration of more training data as well as intra-annual analyses of supraglacial lake occurrence across the whole continent and with focus on supraglacial lake development throughout a summer melt season and into Antarctic winter. KW - Antarctica KW - Antarctic ice sheet KW - supraglacial lakes KW - ice sheet hydrology KW - Sentinel-1 KW - remote sensing KW - machine learning KW - deep learning KW - semantic segmentation KW - convolutional neural network Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-222998 SN - 2072-4292 VL - 13 IS - 2 ER - TY - THES A1 - Haack, Stephanie T1 - A novel mouse model for systemic cytokine release upon treatment with a superagonistic anti-CD28 antibody T1 - Ein neues Mausmodell zur Untersuchung der Zytokinfreisetzung nach Behandlung mit einem superagonistischen anti-CD28 Antikörper N2 - The adaptive immune system is known to provide highly specific and effective immunity against a broad variety of pathogens due to different effector cells. The most prominent are CD4+ T-cells which differentiate after activation into distinct subsets of effector and memory cells, amongst others T helper 1 (Th1) cells. We have recently shown that mouse as well as human Th1 cells depend on T cell receptor (TCR) signals concomitant with CD28 costimulation in order to secrete interferon  (IFN) which is considered as their main effector function. Moreover, there is a class of anti-CD28 monoclonal antibodies that is able to induce T cell (re-)activation without concomitant TCR ligation. These so-called CD28-superagonists (CD28-SA) have been shown to preferentially activate and expand CD4+ Foxp3+ regulatory T (Treg) cells and thereby efficaciously conferring protection e.g. against autoimmune responses in rodents and non-human primates. Considering this beneficial effect, CD28-SA were thought to be of great impact for immunotherapeutic approaches and a humanized CD28-SA was subjected to clinical testing starting with a first-in-man trial in London in 2006. Unexpectedly, the volunteers experienced life-threatening side effects due to a cytokine release syndrome (CRS) that was unpredicted by the preclinical studies prior to the trial. Retrospectively, CD4+ memory T cells within the tissues were identified as source of pro-inflammatory cytokines released upon CD28-SA administration. This was not predicted by the preclinical testing indicating a need for more reliable and predictive animal models. Whether mouse CD4+ T cells are generally irresponsive to CD28-SA stimulation or rather the lack of a bona fide memory T cell compartment in cleanly housed specific-pathogen-free (SPF) mice is the reason why the rodent models failed to predict the risk for a CRS remained unclear. To provide SPF mice with a true pool of memory/effector T cells, we transferred in vitro differentiated TCR-transgenic OT-II Th1 cells into untreated recipient mice. Given that Treg cells suppress T cell activation after CD28- SA injection in vivo, recipients were either Treg-competent or Treg-deficient, wild type or DEREG mice, respectively. Subsequent CD28-SA administration resulted in induction of systemic pro-inflammatory cytokine release, dominated by IFN, that was observed to be much more pronounced and robust in Treg-deficient recipients. Employing a newly established in vitro system mirroring the in vivo responses to CD28-SA stimulation of Th1 cells revealed that antigen-presenting cells (APCs) amplify CD28-SAinduced IFN release by Th1 cells due to CD40/CD40L-interactions. Thus, these data are the first to show that mouse Th1 cells are indeed sensitive to CD28-SA stimulation in vivo and in vitro responding with strong IFN release accompanied by secretion of further pro-inflammatory cytokines, which is compatible with a CRS. In conclusion, this study will facilitate preclinical testing of immunomodulatory agents providing a mouse model constituting more “human-like” conditions allowing a higher degree of reliability and translationability. N2 - Das adaptive Immunsystem ermöglicht mittels hocheffektiver, antigen-spezifischer Mechanismen und unterschiedlicher Effektorzellen den Schutz vor einer nahezu unbegrenzten Vielfalt von Pathogenen. Die Hauptakteure stellen hierbei CD4+ T-Zellen dar, welche nach Aktivierung distinkte Effektorpopulationen, unter anderem Th1 Zellen, bilden. Wir zeigten kürzlich, dass sowohl für Maus- als auch humane Th1-Zellen CD28-Kostimulation mit zeitgleicher T-Zellrezeptor (TZR)-Aktivierung essentiell für die Sekretion von Interferon  (IFN), deren Haupteffektorfunktion, ist. Allerdings sind monoklonale anti-CD28 Anti-körper bekannt, die auch ohne TZR-Signal T-Zellen aktivieren können. Diese sogenannten CD28 Supera-gonisten (CD28-SA) aktivieren und expandieren vorrangig CD4+ Foxp3+ regulatorische T-Zellen (Treg) und vermitteln wirksamen Schutz vor z.B. Autoimmunreaktionen in Nagern und Primaten. Um diesen erfolgversprechenden Effekt für immuntherapeutische Ansätze nutzen zu können, wurde 2006 in Lon-don eine erste klinische Erprobung eines humanisierten CD28-SA begonnen. Unerwarteterweise zeigten sich bei den Probanden lebensbedrohliche Nebenwirkungen, die Ausdruck eines Zytokin-Ausschüttungs-Syndroms (Cytokine Release Syndrome, CRS) waren, welches durch die vorangegangenen präklinischen Studien nicht vorhersagbar war. Rückblickend konnte die Sekretion pro-inflammatorischer Zytokine auf CD4+ Gedächtnis-T-Zellen im Gewebe zurückgeführt werden, die so auf die Gabe des CD28-SA reagier-ten. Die unvorhersehbare Reaktion im Menschen zeigt deutlich, dass verlässlichere und prädiktivere Tiermodelle unverzichtbar sind. Ob Maus CD4+-T-Zellen möglicherweise nicht durch CD28-SA stimulier-bar sind oder dieser fehlgeleiteten Einschätzung über das mögliche Risiko eines CRS eher das Fehlen eines echten CD4+ Gedächtnis-T-Zellen-Kompartiments in sauber gehaltenen spezifischen-Pathogen-freien (SPF) Mäusen zugrunde liegt, ist bisher ungeklärt. Um in SPF-Mäusen ein Gedächtnis-T-Zell-Kompartiment zu etablieren, wurden in vitro-differenzierte Th1 Zellen, die TZR-transgenen OT-II-Mäusen entstammen, in unbehandelte Empfängermäuse transferiert. Da bekannt ist, dass Treg-Zellen die Aktivierung von T-Zellen nach Anwendung von CD28-SA in vivo supprimieren, wurden Treg-kompetente (wildtypische) oder -defiziente (DEREG) Empfänger verwendet. Die anschließend erfolgte Injektion von CD28-SA löste die systemische Sekretion pro-inflammatorischer Zytokine aus, wobei eine stark erhöhter IFN-Konzentration im Serum zu beobachten war, welche deutlich ausgeprägter und robuster bei den Treg-defizienten Empfängern ausfiel. Ein neu etabliertes in vitro-System, welches die in vivo Antwort der Th1-Zellen auf CD28-SA-Stimulation widerspiegelt, identifizierte Antigen-präsentierende Zellen (APZs) als essentiellen Faktor für die erhöhte IFN-Sekretion der Th1-Zellen nach CD28-SA-Stimulation in Abhängigkeit von CD40/CD40L-Interaktionen. Zusammenfassend zeigt diese Thesis zum ersten Mal, dass Maus Th1 Zellen sowohl in vivo als auch in vitro durch CD28 SA stimulierbar sind, wodurch eine starke IFN-Sekretion induziert wird, die von der gesteigerten Ausschüttung anderer pro-inflammatorischer Zytokine begleitet wird und in Abwesenheit von Treg einem CRS gleicht. Folglich kann diese Erkenntnis die präklinische Forschung bei der Erprobung neuer immuntherapeutischer Ansät-ze durch ein neues Mausmodell voranbringen, das dem menschlichen erfahreneren Immunsystem mehr als bisherige Modelle entspricht und somit verlässlichere Vorhersagen erlaubt und eine verbesserte Übertragbarkeit von Maus zu Mensch ermöglicht. KW - CD28 KW - CD28-SA KW - cytokine release syndrome Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-237757 ER - TY - JOUR A1 - Bartsch, Jan A1 - Borzì, Alfio A1 - Fanelli, Francesco A1 - Roy, Souvik T1 - A numerical investigation of Brockett’s ensemble optimal control problems JF - Numerische Mathematik N2 - This paper is devoted to the numerical analysis of non-smooth ensemble optimal control problems governed by the Liouville (continuity) equation that have been originally proposed by R.W. Brockett with the purpose of determining an efficient and robust control strategy for dynamical systems. A numerical methodology for solving these problems is presented that is based on a non-smooth Lagrange optimization framework where the optimal controls are characterized as solutions to the related optimality systems. For this purpose, approximation and solution schemes are developed and analysed. Specifically, for the approximation of the Liouville model and its optimization adjoint, a combination of a Kurganov–Tadmor method, a Runge–Kutta scheme, and a Strang splitting method are discussed. The resulting optimality system is solved by a projected semi-smooth Krylov–Newton method. Results of numerical experiments are presented that successfully validate the proposed framework. KW - numerical analysis KW - Brockett KW - ensemble optimal control problems Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-265352 VL - 149 IS - 1 ER - TY - JOUR A1 - Homburg, Annika A1 - Weiß, Christian H. A1 - Alwan, Layth C. A1 - Frahm, Gabriel A1 - Göb, Rainer T1 - A performance analysis of prediction intervals for count time series JF - Journal of Forecasting N2 - One of the major motivations for the analysis and modeling of time series data is the forecasting of future outcomes. The use of interval forecasts instead of point forecasts allows us to incorporate the apparent forecast uncertainty. When forecasting count time series, one also has to account for the discreteness of the range, which is done by using coherent prediction intervals (PIs) relying on a count model. We provide a comprehensive performance analysis of coherent PIs for diverse types of count processes. We also compare them to approximate PIs that are computed based on a Gaussian approximation. Our analyses rely on an extensive simulation study. It turns out that the Gaussian approximations do considerably worse than the coherent PIs. Furthermore, special characteristics such as overdispersion, zero inflation, or trend clearly affect the PIs' performance. We conclude by presenting two empirical applications of PIs for count time series: the demand for blood bags in a hospital and the number of company liquidations in Germany. KW - coherent forecasting KW - count time series KW - estimation error KW - Gaussian approximation KW - prediction interval Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-217906 VL - 40 IS - 4 SP - 603 EP - 609 ER - TY - JOUR A1 - Natemeyer, Carolin A1 - Wachsmuth, Daniel T1 - A proximal gradient method for control problems with non-smooth and non-convex control cost JF - Computational Optimization and Applications N2 - We investigate the convergence of the proximal gradient method applied to control problems with non-smooth and non-convex control cost. Here, we focus on control cost functionals that promote sparsity, which includes functionals of L\(^{p}\)-type for p\in [0,1). We prove stationarity properties of weak limit points of the method. These properties are weaker than those provided by Pontryagin’s maximum principle and weaker than L-stationarity. KW - sparse control problems KW - proximal gradient method KW - non-smooth and non-convex optimization Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-269069 SN - 1573-2894 VL - 80 IS - 2 ER - TY - JOUR A1 - Hennig, Thomas A1 - Djakovic, Lara A1 - Dölken, Lars A1 - Whisnant, Adam W. T1 - A Review of the Multipronged Attack of Herpes Simplex Virus 1 on the Host Transcriptional Machinery JF - Viruses N2 - During lytic infection, herpes simplex virus (HSV) 1 induces a rapid shutoff of host RNA synthesis while redirecting transcriptional machinery to viral genes. In addition to being a major human pathogen, there is burgeoning clinical interest in HSV as a vector in gene delivery and oncolytic therapies, necessitating research into transcriptional control. This review summarizes the array of impacts that HSV has on RNA Polymerase (Pol) II, which transcribes all mRNA in infected cells. We discuss alterations in Pol II holoenzymes, post-translational modifications, and how viral proteins regulate specific activities such as promoter-proximal pausing, splicing, histone repositioning, and termination with respect to host genes. Recent technological innovations that have reshaped our understanding of previous observations are summarized in detail, along with specific research directions and technical considerations for future studies. KW - herpes simplex virus KW - RNA polymerase II KW - transcription KW - host shutoff KW - promoter-proximal pausing KW - C-terminal domain KW - polyadenylation KW - splicing Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-246165 SN - 1999-4915 VL - 13 IS - 9 ER - TY - JOUR A1 - Ockermann, Philipp A1 - Headley, Laura A1 - Lizio, Rosario A1 - Hansmann, Jan T1 - A Review of the Properties of Anthocyanins and Their Influence on Factors Affecting Cardiometabolic and Cognitive Health JF - Nutrients N2 - The incidence of cardiovascular and metabolic diseases has increased over the last decades and is an important cause of death worldwide. An upcoming ingredient on the nutraceutical market are anthocyanins, a flavonoid subgroup, abundant mostly in berries and fruits. Epidemiological studies have suggested an association between anthocyanin intake and improved cardiovascular risk, type 2 diabetes and myocardial infarct. Clinical studies using anthocyanins have shown a significant decrease in inflammation markers and oxidative stress, a beneficial effect on vascular function and hyperlipidemia by decreasing low-density lipoprotein and increasing high-density lipoprotein. They have also shown a potential effect on glucose homeostasis and cognitive decline. This review summarizes the effects of anthocyanins in in-vitro, animal and human studies to give an overview of their application in medical prevention or as a dietary supplement. KW - anthocyanins KW - antioxidative KW - blood pressure KW - hyperlipidemia KW - diabetes KW - inflammation Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-245116 SN - 2072-6643 VL - 13 IS - 8 ER - TY - JOUR A1 - Pirner, Marlies T1 - A review on BGK models for gas mixtures of mono and polyatomic molecules JF - Fluids N2 - We consider the Bathnagar–Gross–Krook (BGK) model, an approximation of the Boltzmann equation, describing the time evolution of a single momoatomic rarefied gas and satisfying the same two main properties (conservation properties and entropy inequality). However, in practical applications, one often has to deal with two additional physical issues. First, a gas often does not consist of only one species, but it consists of a mixture of different species. Second, the particles can store energy not only in translational degrees of freedom but also in internal degrees of freedom such as rotations or vibrations (polyatomic molecules). Therefore, here, we will present recent BGK models for gas mixtures for mono- and polyatomic particles and the existing mathematical theory for these models. KW - multi-fluid mixture KW - kinetic model KW - BGK approximation KW - degrees of freedom in internal energy KW - existence of solutions KW - large-time behaviour Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-250161 SN - 2311-5521 VL - 6 IS - 11 ER -