TY  - JOUR
A1  - Wolfahrt, Sonja
A1  - Herman, Sandra
A1  - Scholz, Claus-Jürgen
A1  - Sauer, Georg
A1  - Deissler, Helmut
T1  - Identification of alternative transcripts of rat CD9 expressed by tumorigenic neural cell lines and in normal tissues
JF  - Genetics and Molecular Biology
N2  - CD9 is the best-studied member of the tetraspanin family of transmembrane proteins. It is involved in various fundamental cellular processes and its altered expression is a characteristic of malignant cells of different origins. Despite numerous investigations confirming its fundamental role, the heterogeneity of CD9 or other tetraspanin proteins was considered only to be caused by posttranslational modification, rather than alternative splicing. Here we describe the first identification of CD9 transcript variants expressed by cell lines derived from fetal rat brain cells. Variant mRNA-B lacks a potential translation initiation codon in the alternative exon 1 and seems to be characteristic of the tumorigenic BT cell lines. In contrast, variant mRNA-C can be translated from a functional initiation codon located in its extended exon 2, and substantial amounts of this form detected in various tissues suggest a contribution to CD9 functions. From the alternative sequence of variant C, a different membrane topology ( 5 transmembrane domains) and a deviating spectrum of functions can be expected.
KW  - tetraspanin
KW  - CD9
KW  - antigen
KW  - cancer
KW  - noncoding RNAs
KW  - nervous system
KW  - poor prognosis
KW  - tetraspanin protein
KW  - transcript
KW  - splice variant
KW  - membrane topology
Y1  - 2013
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-131801
VL  - 36
IS  - 2
ER  -