TY - JOUR A1 - Abdel-Latif, Rania A1 - Fathy, Moustafa A1 - Anwar, Hend Ali A1 - Naseem, Muhammad A1 - Dandekar, Thomas A1 - Othman, Eman M. T1 - Cisplatin-induced reproductive toxicity and oxidative stress: ameliorative effect of kinetin JF - Antioxidants N2 - Cisplatin is a commonly used chemotherapeutic agent; however, its potential side effects, including gonadotoxicity and infertility, are a critical problem. Oxidative stress has been implicated in the pathogenesis of cisplatin-induced testicular dysfunction. We investigated whether kinetin use at different concentrations could alleviate gonadal injury associated with cisplatin treatment, with an exploration of the involvement of its antioxidant capacity. Kinetin was administered in different doses of 0.25, 0.5, and 1 mg/kg, alone or along with cisplatin for 10 days. Cisplatin toxicity was induced via a single IP dose of 7 mg/kg on day four. In a dose-dependent manner, concomitant administration of kinetin with cisplatin significantly restored testicular oxidative stress parameters, corrected the distorted sperm quality parameters and histopathological changes, enhanced levels of serum testosterone and testicular StAR protein expression, as well as reduced the up-regulation of testicular TNF-α, IL-1β, Il-6, and caspase-3, caused by cisplatin. It is worth noting that the testicular protective effect of the highest kinetin dose was comparable/more potent and significantly higher than the effects of vitamin C and the lowest kinetin dose, respectively. Overall, these data indicate that kinetin may offer a promising approach for alleviating cisplatin-induced reproductive toxicity and organ damage, via ameliorating oxidative stress and reducing inflammation and apoptosis. KW - cytokinins KW - kinetin KW - cisplatin KW - reproductive toxicity Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-271223 SN - 2076-3921 VL - 11 IS - 5 ER - TY - JOUR A1 - Abendroth, Johanna A1 - Nauroth, Peter A1 - Richter, Tobias A1 - Gollwitzer, Mario T1 - Non-strategic detection of identity-threatening information: Epistemic validation and identity defense may share a common cognitive basis JF - PLoS ONE N2 - Readers use prior knowledge to evaluate the validity of statements and detect false information without effort and strategic control. The present study expands this research by exploring whether people also non-strategically detect information that threatens their social identity. Participants (N = 77) completed a task in which they had to respond to a “True” or “False” probe after reading true, false, identity-threatening, or non-threatening sentences. Replicating previous studies, participants reacted more slowly to a positive probe (“True”) after reading false (vs. true) sentences. Notably, participants also reacted more slowly to a positive probe after reading identity-threatening (vs. non-threatening) sentences. These results provide first evidence that identity-threatening information, just as false information, is detected at a very early stage of information processing and lends support to the notion of a routine, non-strategic identity-defense mechanism. KW - social identity KW - cognitive basis KW - identity defense Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-301019 VL - 17 IS - 1 ER - TY - JOUR A1 - Achenbach, Leonard A1 - Huppertz, Gunnar A1 - Zeman, Florian A1 - Weber, Johannes A1 - Luig, Patrick A1 - Rudert, Maximilian A1 - Krutsch, Werner T1 - Multicomponent stretching and rubber band strengthening exercises do not reduce overuse shoulder injuries: a cluster randomised controlled trial with 579 handball athletes JF - BMJ Open Sport & Exercise Medicine N2 - Objectives Handball is associated with a high risk of overuse shoulder injury. This study investigated if an injury prevention programme effectively reduces overuse injury to the throwing shoulder of handball athletes. Methods 61 men’s and women’s handball teams (u-19 and senior athletes) were cluster-randomised into an intervention and a control group in the 2019–2020 season. Players of the intervention group regularly carried out an injury prevention programme. Both groups documented overuse shoulder injuries via an online questionnaire every second week. The primary endpoint was the prevalence of overuse injury to the throwing shoulder. Secondary endpoints were the influence of compliance on the primary endpoint and intensity of overuse shoulder symptoms measured by a shortened, handball-specific Western Ontario Shoulder Index (WOSI). Results 31 teams (295 players) in the intervention group and 30 teams (284 players) in the control group were included for analyses. The overall questionnaire response rate was 61%. The average prevalence of overuse shoulder injury did not significantly differ between the intervention group (n=109, 38.4% (95% CI 32.9% to 44.2%)) and the control group (n=106, 35.9% (95% CI 30.7% to 41.6%), p=0.542). Compliance with the intervention programme did not significantly affect overuse shoulder injury (p=0.893). Using generalised estimating equations for WOSI, the estimated mean for the intervention group was 44.6 points (95% CI 42.0 to 47.1) and 47.6 points for the control group (95% CI 44.9 to 50.3, p=0.111). Conclusions A multicomponent exercise programme using rubber bands and stretching did not significantly reduce the prevalence or symptoms of overuse throwing shoulder injury in handball athletes of both sexes. Randomised controlled study; level of evidence I. KW - handball KW - multicomponent stretching KW - shoulder injuries Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-300770 SN - 2055-7647 VL - 8 IS - 1 ER - TY - JOUR A1 - Achenbach, Leonard A1 - Le Hanneur, Malo A1 - Camenzind, Roland S. A1 - Bouyer, Michael A1 - Pottecher, Pierre A1 - Lafosse, Thibault T1 - Systematic bifocal decompression for isolated long thoracic nerve paresis: A case series of 12 patients JF - Interdisciplinary Neurosurgery N2 - To date, no consensus exists regarding the best surgical management of isolated, micro-traumatic long thoracic nerve (LTN) paresis. Our hypothesis was that a combined decompression of the LTN at two potential locations for entrapment would be effective in the management of dynamic LTN paresis. We report on twelve patients with isolated LTN parersis, with tenderness at two entrapment sites, who underwent bifocal LTN decompression after undergoing unsuccessful conservative treatment for at least 6 months; all patients had preoperative electrodiagnostic studies that confirmed the paresis and ruled out peripheral neuritis. Clinical and electrical improvements were observed in eight patients (67%) regarding shoulder flexion, shoulder abduction, and Quick-DASH scores. Four patients (33%) did not improve after surgery. The results corroborate our hypothesis that a bifocal LTN decompression can be an effective and reliable therapeutic option in more than half of a very selective patient population suffering from serratus anterior muscle deficiency. KW - entrapment, traction KW - serratus anterior KW - scapular winging KW - scapula alata KW - dyskinesia KW - peripheral nerve KW - nerve compression KW - micro-traumatic KW - neurolysis Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-265085 VL - 27 ER - TY - JOUR A1 - Ademmer, Martin A1 - Horn, Wolfram A1 - Quast, Josefine T1 - Stock market dynamics and the relative importance of domestic, foreign, and common shocks JF - International Journal of Finance & Economics N2 - We quantify the contemporaneous relationships among stock markets in the euro area, the United States, and a group of emerging economies over the period from 2008 to 2017. Exploiting the heteroskedasticity in the stock market data, we identify shocks that originated in the respective domestic markets and shocks that are common to all markets. Our results underline the leading role of the United States in international equity markets, but also point to the importance of indirect spillovers for all economies. Variance decompositions show that while domestic shocks explain the bigger part of the variation in each stock market, a substantial part of the variation in the euro area and the emerging economies can be attributed to foreign shocks. A comparison with a sample covering the pre‐crisis period from 1999 to 2007 suggests a strengthening of the linkages among global stock markets in recent years. In particular, the spillovers from advanced to emerging economies have become more pronounced. KW - financial linkages KW - heteroskedasticity KW - identification KW - spillovers KW - stock markets Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-225729 VL - 27 IS - 4 SP - 3911 EP - 3923 ER - TY - JOUR A1 - Al-Hejailan, Reem A1 - Weigel, Tobias A1 - Schürlein, Sebastian A1 - Berger, Constantin A1 - Al-Mohanna, Futwan A1 - Hansmann, Jan T1 - Decellularization of full heart — optimizing the classical sodium-dodecyl-sulfate-based decellularization protocol JF - Bioengineering N2 - Compared to cell therapy, where cells are injected into a defect region, the treatment of heart infarction with cells seeded in a vascularized scaffold bears advantages, such as an immediate nutrient supply or a controllable and persistent localization of cells. For this purpose, decellularized native tissues are a preferable choice as they provide an in vivo-like microenvironment. However, the quality of such scaffolds strongly depends on the decellularization process. Therefore, two protocols based on sodium dodecyl sulfate or sodium deoxycholate were tailored and optimized for the decellularization of a porcine heart. The obtained scaffolds were tested for their applicability to generate vascularized cardiac patches. Decellularization with sodium dodecyl sulfate was found to be more suitable and resulted in scaffolds with a low amount of DNA, a highly preserved extracellular matrix composition, and structure shown by GAG quantification and immunohistochemistry. After seeding human endothelial cells into the vasculature, a coagulation assay demonstrated the functionality of the endothelial cells to minimize the clotting of blood. Human-induced pluripotent-stem-cell-derived cardiomyocytes in co-culture with fibroblasts and mesenchymal stem cells transferred the scaffold into a vascularized cardiac patch spontaneously contracting with a frequency of 25.61 ± 5.99 beats/min for over 16 weeks. The customized decellularization protocol based on sodium dodecyl sulfate renders a step towards a preclinical evaluation of the scaffolds. KW - tissue engineering KW - decellularization KW - vascularized scaffold KW - cardiac patch KW - dynamic culture Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-270781 SN - 2306-5354 VL - 9 IS - 4 ER - TY - JOUR A1 - Al-Warhi, Tarfah A1 - Elmaidomy, Abeer H. A1 - Maher, Sherif A. A1 - Abu-Baih, Dalia H. A1 - Selim, Samy A1 - Albqmi, Mha A1 - Al-Sanea, Mohammad M. A1 - Alnusaire, Taghreed S. A1 - Ghoneim, Mohammed M. A1 - Mostafa, Ehab M. A1 - Hussein, Shaimaa A1 - El-Damasy, Ashraf K. A1 - Saber, Entesar Ali A1 - Elrehany, Mahmoud A. A1 - Sayed, Ahmed M. A1 - Othman, Eman M. A1 - El-Sherbiny, Mohamed A1 - Abdelmohsen, Usama Ramadan T1 - The wound-healing potential of Olea europaea L. Cv. Arbequina leaves extract: an integrated in vitro, in silico, and in vivo investigation JF - Metabolites N2 - Olea europaea L. Cv. Arbequina (OEA) (Oleaceae) is an olive variety species that has received little attention. Besides our previous work for the chemical profiling of OEA leaves using LC–HRESIMS, an additional 23 compounds are identified. An excision wound model is used to measure wound healing action. Wounds are provided with OEA (2% w/v) or MEBO\(^®\) cream (marketed treatment). The wound closure rate related to vehicle-treated wounds is significantly increased by OEA. Comparing to vehicle wound tissues, significant levels of TGF-β in OEA and MEBO\(^®\) (p < 0.05) are displayed by gene expression patterns, with the most significant levels in OEA-treated wounds. Proinflammatory TNF-α and IL-1β levels are substantially reduced in OEA-treated wounds. The capability of several lignan-related compounds to interact with MMP-1 is revealed by extensive in silico investigation of the major OEA compounds (i.e., inverse docking, molecular dynamics simulation, and ΔG calculation), and their role in the wound-healing process is also characterized. The potential of OEA as a potent MMP-1 inhibitor is shown in subsequent in vitro testing (IC\(_{50}\) = 88.0 ± 0.1 nM). In conclusion, OEA is introduced as an interesting therapeutic candidate that can effectively manage wound healing because of its anti-inflammatory and antioxidant properties. KW - olive KW - LC–HRESIMS KW - wound KW - Olea KW - TNF-α KW - virtual docking KW - TGF-β KW - MMP-1 Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-286150 SN - 2218-1989 VL - 12 IS - 9 ER - TY - JOUR A1 - Aldejohann, Alexander Maximilian A1 - Wiese-Posselt, Miriam A1 - Gastmeier, Petra A1 - Kurzai, Oliver T1 - Expert recommendations for prevention and management of Candida auris transmission JF - Mycoses N2 - Candida auris was first described as a yeast pathogen in 2009. Since then, the species has emerged worldwide. In contrast to most other Candida spp., C. auris frequently exhibits multi-drug resistance and is readily transmitted in hospital settings. While most detections so far are from colonised patients, C. auris does cause superficial and life-threatening invasive infections. During management of the first documented C. auris transmission in a German hospital, experts from the National Reference Centers for Invasive Fungal Infections (NRZMyk) and the National Reference Center for Surveillance of Nosocomial Infections screened available literature and integrated available knowledge on infection prevention and C. auris epidemiology and biology to enable optimal containment. Relevant recommendations developed during this process are summarised in this guidance document, intended to assist in management of C. auris transmission and potential outbreak situations. Rapid and effective measures to contain C. auris spread require a multi-disciplinary approach that includes clinical specialists of the affected unit, nursing staff, hospital hygiene, diagnostic microbiology, cleaning staff, hospital management and experts in diagnostic mycology / fungal infections. Action should be initiated in a step-wise process and relevant interventions differ between management of singular C. auris colonised / infected patients and detection of potential C. auris transmission or nosocomial outbreaks. KW - Candida auris KW - nosocomial transmission KW - infection prevention KW - expert recommendation Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-318570 VL - 65 IS - 6 SP - 590 EP - 598 ER - TY - JOUR A1 - Allgaier, Johannes A1 - Schlee, Winfried A1 - Probst, Thomas A1 - Pryss, Rüdiger T1 - Prediction of tinnitus perception based on daily life mHealth data using country origin and season JF - Journal of Clinical Medicine N2 - Tinnitus is an auditory phantom perception without external sound stimuli. This chronic perception can severely affect quality of life. Because tinnitus symptoms are highly heterogeneous, multimodal data analyses are increasingly used to gain new insights. MHealth data sources, with their particular focus on country- and season-specific differences, can provide a promising avenue for new insights. Therefore, we examined data from the TrackYourTinnitus (TYT) mHealth platform to create symptom profiles of TYT users. We used gradient boosting engines to classify momentary tinnitus and regress tinnitus loudness, using country of origin and season as features. At the daily assessment level, tinnitus loudness can be regressed with a mean absolute error rate of 7.9% points. In turn, momentary tinnitus can be classified with an F1 score of 93.79%. Both results indicate differences in the tinnitus of TYT users with respect to season and country of origin. The significance of the features was evaluated using statistical and explainable machine learning methods. It was further shown that tinnitus varies with temperature in certain countries. The results presented show that season and country of origin appear to be valuable features when combined with longitudinal mHealth data at the level of daily assessment. KW - tinnitus KW - gradient boosting machine KW - mobile health KW - machine learning KW - multimodal data KW - explainable machine learning Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-281812 SN - 2077-0383 VL - 11 IS - 15 ER - TY - THES A1 - Amatobi, Kelechi Michael T1 - Circadian clocks determine transport and membrane lipid oscillation in \(Drosophila\) hemolymph in complex interactions between nutrient-type, photic conditions and feeding behaviour T1 - Die innere Uhr bestimmt den Transport und die Membranlipid-Oszillation in der \(Drosophila\) Hämolymphe in komplexen Interaktionen zwischen Nährstofftyp, photischen Bedingungen und Fressverhalten N2 - The interaction between circadian clocks and metabolism is of increasing interest, since clock dysfunction often correlates with metabolic pathologies. Many research articles have been published analysing the impact of factors such as circadian clock, light, feeding time and diet-type on energy homeostasis in various tissues/organs of organisms with most of the findings done in mammals. Little is known about the impact of circadian clock and the above-mentioned factors on circulating lipids, especially the transport form of lipids - diacylglycerol (DG) and membrane lipids such as phosphatidylethanolamine (PE) and phosphatidylcholine (PC) in the Drosophila hemolymph. The fruit fly Drosophila is a prime model organism in circadian, behaviour and metabolism research. To study the role of circadian clock and behaviour in metabolism, we performed an extensive comparative hemolymph lipid (diacylglycerol: DG, phosphatidylethanolamine: PE, phosphatidylcholine: PC) analysis using ultra performance liquid chromatography coupled to time-of-flight mass spectrometry (UPLC-MS) between wild-type flies (WTCS) and clock disrupted mutants (per01). In addition, clock controlled food intake– feeding behaviour was investigated. Time-dependent variation of transport (DG) and membrane lipids (PE and PC) were not rhythmic in WTCS under constant darkness and in per01 under LD, suggesting an impact of light and clock genes on daily lipid oscillations. Day-time and night-time restriction of food led to comparable lipid profiles, suggesting that lipid oscillations are not exclusively entrained by feeding but rather are endogenously regulated. Ultradian oscillations in lipid levels in WTCS under LD were masked by digested fatty acids since lipid levels peaked more robustly at the beginning and end of light phase when flies were fed a lipid- and protein-free diet. These results suggest that metabolite (DG, PE and PC) oscillation is influenced by complex interactions between nutrient-type, photic conditions, circadian clock and feeding time. In conclusion, the results of this thesis suggest that circadian clocks determine transport and membrane lipid oscillation in Drosophila hemolymph in complex interactions between nutrient-type, photic conditions and feeding behaviour. N2 - Die Interaktion zwischen Innerer Uhr und Metabolismus ist von zunehmendem Interesse, weil Störungen der Inneren Uhr oft mit metabolischen Störungen assoziiert sind. Zahlreiche Untersuchungen zum Einfluss verschiedener Faktoren, u.a. der Inneren Uhr, Lichtregime, Zeitpunkt der Nahrungsaufnahme und Art der Diät, auf die Energiehomöostase in verschiedenen Geweben und Organen wurden vor allem in Säugetieren durchgeführt. Der Einfluss der Inneren Uhr und der oben genannten weiteren Faktoren auf zirkulierende Lipide in der Hämolymphe von Drosophila, insbesondere auf die Transportform Diacylglycerol (DG) und Membranlipide (wie z.B. Phosphatidylethanolamin (PE) und Phospathidylcholine (PC)), ist jedoch kaum untersucht. Die Taufliege Drosophila dient dabei als hervorragendes Modell in der circadianen Verhaltens- und Metabolismusforschung. Um die Rolle der Inneren Uhr und circadianen Verhaltens auf den Metabolismus zu untersuchen, haben wir eine extensive und vergleichende Lipidanalyse (DG, PE, PC) in der Hämolymphe von Wildtyp-Fliegen (WTCS) und Uhrmutanten (per01) mittels Ultrahochleistungs-Flüssigkeits-chromatographie gekoppelt mit Flugzeit-Massenspektrometrie (UPLC-MS) durchgeführt. Gleichzeitig wurde auch die circadian gesteuerte Nahrungsaufnahme untersucht. Die zeitabhängigen Schwankungen der Transport-(DG) und Membranlipide (PE, PC) unterlagen keiner tageszeitlichen Rhythmik in konstanter Dunkelheit in Wildtypfliegen, und unter Licht-Dunkelwechsel (LD) in per01 Mutanten. Dies weist auf einen Einfluss der Inneren Uhr und des Lichts auf tägliche Lipidschwankungen hin. Restriktion der Futtergabe auf entweder Tag oder Nacht ergab ähnliche Lipidprofile, was darauf hinweist, daß Schwankungen in den Lipidkonzentrationen nicht ausschliesslich durch die Nahrungsaufnahme, sondern auch endogen geregelt werden. Ultradiane Oszillationen in der Lipidkonzentration in WTCS unter LD-Bedingungen wurden durch mit der Nahrung aufgenommene Fettsäuren maskiert, zeigten sich aber deutlicher zu Beginn und Ende der Lichtphase wenn die Fliegen auf einer Lipid- und Protein-freien Diät gehalten wurden. Diese Ergebnisse weisen darauf hin, daß Oszillationen in Lipiden (DG, PE und PC) in der Hämolymphe durch eine komplexe Interaktion zwischen Diättyp, Lichtregime, Innerer Uhr und Zeitpunkt der Nahrungsaufnahme bestimmt wird. Zusammengenommen zeigen die Resultate dieser Arbeit, dass die Innere Uhr in komplexer Interaktion mit Diättyp, Lichtregime und Freßverhalten das zeitliche Profil von Transport- und Membranlipiden in der Drosophila-Hämolymphe bestimmt. KW - Pharmaceutische Biologie KW - DG diacyglycerol KW - PE Phosphoethanolamine Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-244462 ER - TY - JOUR A1 - Ambrožová, Lucie A1 - Finnberg, Sven A1 - Feldmann, Benedikt A1 - Buse, Jörn A1 - Preuss, Henry A1 - Ewald, Jörg A1 - Thorn, Simon T1 - Coppicing and topsoil removal promote diversity of dung‐inhabiting beetles (Coleoptera: Scarabaeidae, Geotrupidae, Staphylinidae) in forests JF - Agricultural and Forest Entomology N2 - Central European forests experience a substantial loss of open-forest organisms due to forest management and increasing nitrogen deposition. However, management strategies, removing different levels of nitrogen, have been rarely evaluated simultaneously. We tested the additive effects of coppicing and topsoil removal on communities of dung-inhabiting beetles compared to closed forests. We sampled 57 021 beetles, using baited pitfall traps exposed on 27 plots. Experimental treatments resulted in significantly different communities by promoting open-habitat species. While alpha diversity did not differ among treatments, gamma diversity of Geotrupidae and Scarabaeidae and beta diversity of Staphylinidae were higher in coppice than in forest. Functional diversity of rove beetles was higher in both, coppice and topsoil-removed plots, compared to control plots. This was likely driven by higher habitat heterogeneity in established forest openings. Five dung beetle species and four rove beetle species benefitted from coppicing, one red-listed dung beetle and two rove beetle species benefitted from topsoil removal. Our results demonstrate that dung-inhabiting beetles related to open forest patches can be promoted by both, coppicing and additional topsoil removal. A mosaic of coppice and bare-soil-rich patches can hence promote landscape-level gamma diversity of dung and rove beetles within forests. KW - nitrogen uptake KW - dung beetle KW - forest management KW - functional diversity KW - insect decline KW - rove beetle Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-258296 VL - 24 IS - 1 ER - TY - JOUR A1 - Amereller, Felix A1 - Deutschbein, Timo A1 - Joshi, Mamta A1 - Schopohl, Jochen A1 - Schilbach, Katharina A1 - Detomas, Mario A1 - Duffy, Leo A1 - Carroll, Paul A1 - Papa, Sophie A1 - Störmann, Sylvère T1 - Differences between immunotherapy-induced and primary hypophysitis—a multicenter retrospective study JF - Pituitary N2 - Objective Immune checkpoint inhibitors can cause various immune-related adverse events including secondary hypophysitis. We compared clinical characteristics of immunotherapy-induced hypophysitis (IIH) and primary hypophysitis (PH) Design Retrospective multicenter cohort study including 56 patients with IIH and 60 patients with PH. Methods All patients underwent extensive endocrine testing. Data on age, gender, symptoms, endocrine dysfunction, MRI, immunotherapeutic agents and autoimmune diseases were collected. Results Median time of follow-up was 18 months in IIH and 69 months in PH. The median time from initiation of immunotherapy to IIH diagnosis was 3 months. IIH affected males more frequently than PH (p < 0.001) and led to more impaired pituitary axes in males (p < 0.001). The distribution of deficient adenohypophysial axes was comparable between both entities, however, central hypocortisolism was more frequent (p < 0.001) and diabetes insipidus considerably less frequent in IIH (p < 0.001). Symptoms were similar except that visual impairment occurred more rarely in IIH (p < 0.001). 20 % of IIH patients reported no symptoms at all. Regarding MRI, pituitary stalk thickening was less frequent in IIH (p = 0.009). Concomitant autoimmune diseases were more prevalent in PH patients before the diagnosis of hypophysitis (p = 0.003) and more frequent in IIH during follow-up (p = 0.002). Conclusions Clinically, IIH and PH present with similar symptoms. Diabetes insipidus very rarely occurs in IIH. Central hypocortisolism, in contrast, is a typical feature of IIH. Preexisting autoimmunity seems not to be indicative of developing IIH. KW - primary hypophysitis KW - immunotherapy-induced hypophysitis KW - checkpoint inhibitors KW - immune-related adverse events KW - pembrolizumab KW - ipilimumab KW - nivolumab Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-308704 SN - 1386-341X SN - 1573-7403 VL - 25 IS - 1 ER - TY - JOUR A1 - An, Ran A1 - Strissel, Pamela L. A1 - Al-Abboodi, Majida A1 - Robering, Jan W. A1 - Supachai, Reakasame A1 - Eckstein, Markus A1 - Peddi, Ajay A1 - Hauck, Theresa A1 - Bäuerle, Tobias A1 - Boccaccini, Aldo R. A1 - Youssef, Almoatazbellah A1 - Sun, Jiaming A1 - Strick, Reiner A1 - Horch, Raymund E. A1 - Boos, Anja M. A1 - Kengelbach-Weigand, Annika T1 - An innovative arteriovenous (AV) loop breast cancer model tailored for cancer research JF - Bioengineering N2 - Animal models are important tools to investigate the pathogenesis and develop treatment strategies for breast cancer in humans. In this study, we developed a new three-dimensional in vivo arteriovenous loop model of human breast cancer with the aid of biodegradable materials, including fibrin, alginate, and polycaprolactone. We examined the in vivo effects of various matrices on the growth of breast cancer cells by imaging and immunohistochemistry evaluation. Our findings clearly demonstrate that vascularized breast cancer microtissues could be engineered and recapitulate the in vivo situation and tumor-stromal interaction within an isolated environment in an in vivo organism. Alginate–fibrin hybrid matrices were considered as a highly powerful material for breast tumor engineering based on its stability and biocompatibility. We propose that the novel tumor model may not only serve as an invaluable platform for analyzing and understanding the molecular mechanisms and pattern of oncologic diseases, but also be tailored for individual therapy via transplantation of breast cancer patient-derived tumors. KW - arteriovenous loop KW - breast cancer KW - animal model Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-278919 SN - 2306-5354 VL - 9 IS - 7 ER - TY - JOUR A1 - Anger, Friedrich A1 - Lock, Johan Friso A1 - Klein, Ingo A1 - Hartlapp, Ingo A1 - Wiegering, Armin A1 - Germer, Christoph-Thomas A1 - Kunzmann, Volker A1 - Löb, Stefan T1 - Does concurrent cholestasis alter the prognostic value of preoperatively elevated CA19-9 serum levels in patients with pancreatic head adenocarcinoma? JF - Annals of Surgical Oncology N2 - Background Pancreatic adenocarcinoma (PDAC) patients with preoperative carbohydrate antigen 19-9 (CA19-9) serum levels higher than 500 U/ml are classified as biologically borderline resectable (BR-B). To date, the impact of cholestasis on preoperative CA19-9 serum levels in these patients has remained unquantified. Methods Data on 3079 oncologic pancreatic resections due to PDAC that were prospectively acquired by the German Study, Documentation and Quality (StuDoQ) registry were analyzed in relation to preoperative CA19-9 and bilirubin serum values. Preoperative CA19-9 values were adjusted according to the results of a multivariable linear regression analysis of pathologic parameters, bilirubin, and CA19-9 values. Results Of 1703 PDAC patients with tumor located in the pancreatic head, 420 (24.5 %) presented with a preoperative CA19-9 level higher than 500 U/ml. Although receiver operating characteristics (ROC) analysis failed to determine exact CA19-9 cut-off values for prognostic indicators (R and N status), the T, N, and G status; the UICC stage; and the number of simultaneous vein resections increased with the level of preoperative CA19-9, independently of concurrent cholestasis. After adjustment of preoperative CA19-9 values, 18.5 % of patients initially staged as BR-B showed CA19-9 values below 500 U/ml. However, the postoperative pathologic results for these patients did not change compared with the patients who had CA19-9 levels higher than 500 U/ml after bilirubin adjustment. Conclusions In this multicenter dataset of PDAC patients, elevation of preoperative CA19-9 correlated with well-defined prognostic pathologic parameters. Bilirubin adjustment of CA19-9 is feasible but does not affect the prognostic value of CA19-9 in jaundiced patients. KW - pancreatic adenocarcinoma (PDAC) KW - CA19-9 KW - cholestasis Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-323854 VL - 29 IS - 13 ER - TY - JOUR A1 - Ansah, Christabel Edena A1 - Abu, Itohan-Osa A1 - Kleemann, Janina A1 - Mahmoud, Mahmoud Ibrahim A1 - Thiel, Michael T1 - Environmental contamination of a biodiversity hotspot — action needed for nature conservation in the Niger Delta, Nigeria JF - Sustainability N2 - The Niger Delta belongs to the largest swamp and mangrove forests in the world hosting many endemic and endangered species. Therefore, its conservation should be of highest priority. However, the Niger Delta is confronted with overexploitation, deforestation and pollution to a large extent. In particular, oil spills threaten the biodiversity, ecosystem services, and local people. Remote sensing can support the detection of spills and their potential impact when accessibility on site is difficult. We tested different vegetation indices to assess the impact of oil spills on the land cover as well as to detect accumulations (hotspots) of oil spills. We further identified which species, land cover types, and protected areas could be threatened in the Niger Delta due to oil spills. The results showed that the Enhanced Vegetation Index, the Normalized Difference Vegetation Index, and the Soil Adjusted Vegetation Index were more sensitive to the effects of oil spills on different vegetation cover than other tested vegetation indices. Forest cover was the most affected land-cover type and oil spills also occurred in protected areas. Threatened species are inhabiting the Niger Delta Swamp Forest and the Central African Mangroves that were mainly affected by oil spills and, therefore, strong conservation measures are needed even though security issues hamper the monitoring and control. KW - nature conservation KW - NDVI KW - pollution KW - remote sensing KW - species KW - vegetation indices KW - oil spill Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-297214 SN - 2071-1050 VL - 14 IS - 21 ER - TY - THES A1 - Anwar, Ammarah T1 - Natural variation of gene regulatory networks in \(Arabidopsis\) \(thaliana\) T1 - Natürliche Variation genregulatorischer Netzwerke in \(Arabidopsis\) \(thaliana\) N2 - Understanding the causal relationship between genotype and phenotype is a major objective in biology. The main interest is in understanding trait architecture and identifying loci contributing to the respective traits. Genome-wide association mapping (GWAS) is one tool to elucidate these relationships and has been successfully used in many different species. However, most studies concentrate on marginal marker effects and ignore epistatic and gene-environment interactions. These interactions are problematic to account for, but are likely to make major contributions to many phenotypes that are not regulated by independent genetic effects, but by more sophisticated gene-regulatory networks. Further complication arises from the fact that these networks vary in different natural accessions. However, understanding the differences of gene regulatory networks and gene-gene interactions is crucial to conceive trait architecture and predict phenotypes. The basic subject of this study – using data from the Arabidopsis 1001 Genomes Project – is the analysis of pre-mature stop codons. These have been incurred in nearly one-third of the ~ 30k genes. A gene-gene interaction network of the co-occurrence of stop codons has been built and the over and under representation of different pairs has been statistically analyzed. To further classify the significant over and under- represented gene-gene interactions in terms of molecular function of the encoded proteins, gene ontology terms (GO-SLIM) have been applied. Furthermore, co- expression analysis specifies gene clusters that co-occur over different genetic and phenotypic backgrounds. To link these patterns to evolutionary constrains, spatial location of the respective alleles have been analyzed as well. The latter shows clear patterns for certain gene pairs that indicate differential selection. N2 - Das Verständnis des kausalen Zusammenhangs zwischen Genotyp und Phänotyp ist ein wichtiges Ziel in der Biologie. Das Hauptinteresse liegt darin, die Merkmalsarchitektur zu verstehen und Loci zu identifizieren, die zu den jeweiligen Merkmalen beitragen. Genome-wide association mapping (GWAS) ist ein Werkzeug, um diese Zusammenhänge aufzuklären und wurde erfolgreich in vielen verschiedenen Arten eingesetzt. Die meisten Studien konzentrieren sich jedoch auf marginale Markereffekte und ignorieren epistatische und Gen-Umwelt-Interaktionen. Diese Wechselwirkungen sind problematisch zu erklären, werden aber wahrscheinlich einen wichtigen Beitrag zu vielen Phänotypen leisten, die nicht durch unabhängige genetische Effekte, sondern durch ausgefeiltere genregulatorische Netzwerke reguliert werden. Eine weitere Komplikation ergibt sich aus der Tatsache, dass sich diese Netzwerke in verschiedenen natürlichen Akzessionen unterscheiden. Das Verständnis der Unterschiede zwischen genregulatorischen Netzwerken und Gen-Gen- Interaktionen ist jedoch entscheidend, um die Merkmalsarchitektur zu konzipieren und Phänotypen vorherzusagen. Das grundlegende Thema dieser Studie – unter Verwendung von Daten aus dem Arabidopsis 1001 Genomes Project – ist die Analyse von vorzeitigen Stop-Codons. Diese sind in fast einem Drittel der ~ 30k-Gene aufgetreten. Ein Gen-Gen- Interaktionsnetzwerk des gleichzeitigen Auftretens von Stop-Codons wurde aufgebaut und die Über- und Unterrepräsentation verschiedener Paare wurde statistisch analysiert. Um die signifikante über- und unterrepräsentierte Gen-Gen-Interaktion in Bezug auf den biologischen Prozess der kodierten Proteine weiter zu klassifizieren, wurden genonkologische Begriffe (GO-SLIM) verwendet. Darüber hinaus spezifiziert die Koexpressionsanalyse Gencluster, die über verschiedene genetische und phänotypische Hintergründe hinweg gleichzeitig auftreten. Um diese Muster mit evolutionären Einschränkungen in Verbindung zu bringen, wurde auch die räumliche Lage der jeweiligen Allele analysiert. Letzteres zeigt klare Muster für bestimmte Genepaare, die auf eine differentielle Selektion hinweisen. KW - Arabidopsis thaliana KW - Co-occurrence matrix KW - co-expression coefficient KW - gene expression networks KW - non-sense mutations KW - phenotype KW - local adaptation KW - variations in genome KW - Ackerschmalwand Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-291549 ER - TY - JOUR A1 - Appell, Jürgen A1 - Brito, Belén López A1 - Reinwand, Simon T1 - Counterexamples on compositions JF - Mathematische Semesterberichte N2 - We give a collection of 16 examples which show that compositions \(g\) \(\circ\) \(f\) of well-behaved functions \(f\) and \(g\) can be badly behaved. Remarkably, in 10 of the 16 examples it suffices to take as outer function \(g\) simply a power-type or characteristic function. Such a collection of examples may serve as a source of exercises for a calculus course. KW - composition of functions KW - examples and counterexamples Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-324306 SN - 0720-728X VL - 70 IS - 1 ER - TY - JOUR A1 - Appeltshauser, Luise A1 - Messinger, Julia A1 - Starz, Katharina A1 - Heinrich, David A1 - Brunder, Anna-Michelle A1 - Stengel, Helena A1 - Fiebig, Bianca A1 - Ayzenberg, Ilya A1 - Birklein, Frank A1 - Dresel, Christian A1 - Dorst, Johannes A1 - Dvorak, Florian A1 - Grimm, Alexander A1 - Joerk, Alexander A1 - Leypoldt, Frank A1 - Mäurer, Mathias A1 - Merl, Patrick A1 - Michels, Sebastian A1 - Pitarokoili, Kalliopi A1 - Rosenfeldt, Mathias A1 - Sperfeld, Anne-Dorte A1 - Weihrauch, Marc A1 - Welte, Gabriel Simon A1 - Sommer, Claudia A1 - Doppler, Kathrin T1 - Diabetes Mellitus Is a Possible Risk Factor for Nodo-paranodopathy With Antiparanodal Autoantibodies JF - Neurology: Neuroimmunology & Neuroinflammation N2 - Background and Objectives Nodo-paranodopathies are peripheral neuropathies with dysfunction of the node of Ranvier. Affected patients who are seropositive for antibodies against adhesion molecules like contactin-1 and neurofascin show distinct clinical features and a disruption of the paranodal complex. An axoglial dysjunction is also a characteristic finding of diabetic neuropathy. Here, we aim to investigate a possible association of antibody-mediated nodo-paranodopathy and diabetes mellitus (DM). Methods We retrospectively analyzed clinical data of 227 patients with chronic inflammatory demyelinating polyradiculoneuropathy and Guillain-Barré syndrome from multiple centers in Germany who had undergone diagnostic testing for antiparanodal antibodies targeting neurofascin-155, pan-neurofascin, contactin-1–associated protein 1, and contactin-1. To study possible direct pathogenic effects of antiparanodal antibodies, we performed immunofluorescence binding assays on human pancreatic tissue sections. Results The frequency of DM was 33.3% in seropositive patients and thus higher compared with seronegative patients (14.1%, OR = 3.04, 95% CI = 1.31–6.80). The relative risk of DM in seropositive patients was 3.4-fold higher compared with the general German population. Seropositive patients with DM most frequently harbored anti–contactin-1 antibodies and had higher antibody titers than seropositive patients without DM. The diagnosis of DM preceded the onset of neuropathy in seropositive patients. No immunoreactivity of antiparanodal antibodies against pancreatic tissue was detected. Discussion We report an association of nodo-paranodopathy and DM. Our results suggest that DM may be a potential risk factor for predisposing to developing nodo-paranodopathy and argue against DM being induced by the autoantibodies. Our findings set the basis for further research investigating underlying immunopathogenetic connections. KW - Diabetes mellitus KW - Nodo-parandopathy KW - Antiparanodal Autoantibodies Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-300551 VL - 9 IS - 3 ER - TY - JOUR A1 - Asam, Sarah A1 - Gessner, Ursula A1 - Almengor González, Roger A1 - Wenzl, Martina A1 - Kriese, Jennifer A1 - Kuenzer, Claudia T1 - Mapping crop types of Germany by combining temporal statistical metrics of Sentinel-1 and Sentinel-2 time series with LPIS data JF - Remote Sensing N2 - Nationwide and consistent information on agricultural land use forms an important basis for sustainable land management maintaining food security, (agro)biodiversity, and soil fertility, especially as German agriculture has shown high vulnerability to climate change. Sentinel-1 and Sentinel-2 satellite data of the Copernicus program offer time series with temporal, spatial, radiometric, and spectral characteristics that have great potential for mapping and monitoring agricultural crops. This paper presents an approach which synergistically uses these multispectral and Synthetic Aperture Radar (SAR) time series for the classification of 17 crop classes at 10 m spatial resolution for Germany in the year 2018. Input data for the Random Forest (RF) classification are monthly statistics of Sentinel-1 and Sentinel-2 time series. This approach reduces the amount of input data and pre-processing steps while retaining phenological information, which is crucial for crop type discrimination. For training and validation, Land Parcel Identification System (LPIS) data were available covering 15 of the 16 German Federal States. An overall map accuracy of 75.5% was achieved, with class-specific F1-scores above 80% for winter wheat, maize, sugar beet, and rapeseed. By combining optical and SAR data, overall accuracies could be increased by 6% and 9%, respectively, compared to single sensor approaches. While no increase in overall accuracy could be achieved by stratifying the classification in natural landscape regions, the class-wise accuracies for all but the cereal classes could be improved, on average, by 7%. In comparison to census data, the crop areas could be approximated well with, on average, only 1% of deviation in class-specific acreages. Using this streamlined approach, similar accuracies for the most widespread crop types as well as for smaller permanent crop classes were reached as in other Germany-wide crop type studies, indicating its potential for repeated nationwide crop type mapping. KW - agriculture KW - random forest classification KW - multispectral data KW - radar data KW - spectral statistics KW - temporal statistics KW - IACS Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-278969 SN - 2072-4292 VL - 14 IS - 13 ER - TY - JOUR A1 - Aster, H-C A1 - Evdokimov, D. A1 - Braun, A. A1 - Üçeyler, N. A1 - Sommer, C. T1 - Analgesic Medication in Fibromyalgia Patients: A Cross-Sectional Study JF - Pain Research and Management N2 - There is no approved drug for fibromyalgia syndrome (FMS) in Europe. In the German S3 guideline, amitriptyline, duloxetine, and pregabalin are recommended for temporary use. The aim of this study was to cross-sectionally investigate the current practice of medication in FMS patients in Germany. We systematically interviewed 156 patients with FMS, while they were participating in a larger study. The patients had been stratified into subgroups with and without a decrease in intraepidermal nerve fiber density. The drugs most commonly used to treat FMS pain were nonsteroidal anti-inflammatory drugs (NSAIDs) (41.0% of all patients), metamizole (22.4%), and amitriptyline (12.8%). The most frequent analgesic treatment regimen was “on demand” (53.9%), during pain attacks, while 35.1% of the drugs were administered daily and the remaining in other regimens. Median pain relief as self-rated by the patients on a numerical rating scale (0–10) was 2 points for NSAIDS, 2 for metamizole, and 1 for amitriptyline. Drugs that were discontinued due to lack of efficacy rather than side effects were acetaminophen, flupirtine, and selective serotonin reuptake inhibitors. Reduction in pain severity was best achieved by NSAIDs and metamizole. Our hypothesis that a decrease in intraepidermal nerve fiber density might represent a neuropathic subtype of FMS, which would be associated with better effectiveness of drugs targeting neuropathic pain, could not be confirmed in this cohort. Many FMS patients take “on-demand” medication that is not in line with current guidelines. More randomized clinical trials are needed to assess drug effects in FMS subgroups. KW - Fibromyalgia KW - analgesic medication KW - study Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-300578 VL - 2022 ER - TY - JOUR A1 - Aster, Hans-Christoph A1 - Evdokimov, Dimitar A1 - Braun, Alexandra A1 - Üçeyler, Nurcan A1 - Kampf, Thomas A1 - Pham, Mirko A1 - Homola, György A. A1 - Sommer, Claudia T1 - CNS imaging characteristics in fibromyalgia patients with and without peripheral nerve involvement JF - Scientific Reports N2 - We tested the hypothesis that reduced skin innervation in fibromyalgia syndrome is associated with specific CNS changes. This prospective case–control study included 43 women diagnosed with fibromyalgia syndrome and 40 healthy controls. We further compared the fibromyalgia subgroups with reduced (n = 21) and normal (n = 22) skin innervation. Brains were analysed for cortical volume, for white matter integrity, and for functional connectivity. Compared to controls, cortical thickness was decreased in regions of the frontal, temporal and parietal cortex in the fibromyalgia group as a whole, and decreased in the bilateral pericalcarine cortices in the fibromyalgia subgroup with reduced skin innervation. Diffusion tensor imaging revealed a significant increase in fractional anisotropy in the corona radiata, the corpus callosum, cingulum and fornix in patients with fibromyalgia compared to healthy controls and decreased FA in parts of the internal capsule and thalamic radiation in the subgroup with reduced skin innervation. Using resting-state fMRI, the fibromyalgia group as a whole showed functional hypoconnectivity between the right midfrontal gyrus and the posterior cerebellum and the right crus cerebellum, respectively. The subgroup with reduced skin innervation showed hyperconnectivity between the inferior frontal gyrus, the angular gyrus and the posterior parietal gyrus. Our results suggest that the subgroup of fibromyalgia patients with pronounced pathology in the peripheral nervous system shows alterations in morphology, structural and functional connectivity also at the level of the encephalon. We propose considering these subgroups when conducting clinical trials. KW - fibromyalgia syndrome KW - CNS imaging KW - peripheral nerve involvement Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-300562 VL - 12 IS - 1 ER - TY - JOUR A1 - Aster, Hans-Christoph A1 - Romanos, Marcel A1 - Walitza, Susanne A1 - Gerlach, Manfred A1 - Mühlberger, Andreas A1 - Rizzo, Albert A1 - Andreatta, Marta A1 - Hasenauer, Natalie A1 - Hartrampf, Philipp E. A1 - Nerlich, Kai A1 - Reiners, Christoph A1 - Lorenz, Reinhard A1 - Buck, Andreas K. A1 - Deserno, Lorenz T1 - Responsivity of the striatal dopamine system to methylphenidate — A within-subject I-123-β-CIT-SPECT study in male children and adolescents with attention-deficit/hyperactivity disorder JF - Frontiers in Psychiatry N2 - Background: Methylphenidate (MPH) is the first-line pharmacological treatment of attention-deficit/hyperactivity disorder (ADHD). MPH binds to the dopamine (DA) transporter (DAT), which has high density in the striatum. Assessments of the striatal dopamine transporter by single positron emission computed tomography (SPECT) in childhood and adolescent patients are rare but can provide insight on how the effects of MPH affect DAT availability. The aim of our within-subject study was to investigate the effect of MPH on DAT availability and how responsivity to MPH in DAT availability is linked to clinical symptoms and cognitive functioning. Methods Thirteen adolescent male patients (9–16 years) with a diagnosis of ADHD according to the DSM-IV and long-term stimulant medication (for at least 6 months) with MPH were assessed twice within 7 days using SPECT after application of I-123-β-CIT to examine DAT binding potential (DAT BP). SPECT measures took place in an on- and off-MPH status balanced for order across participants. A virtual reality continuous performance test was performed at each time point. Further clinical symptoms were assessed for baseline off-MPH. Results On-MPH status was associated with a highly significant change (−29.9%) of striatal DAT BP as compared to off-MPH (t = −4.12, p = 0.002). A more pronounced change in striatal DAT BP was associated with higher off-MPH attentional and externalizing symptom ratings (Pearson r = 0.68, p = 0.01). Striatal DAT BP off-MPH, but not on-MPH, was associated with higher symptom ratings (Pearson r = 0.56, p = 0.04). Conclusion Our findings corroborate previous reports from mainly adult samples that MPH changes striatal DAT BP availability and suggest higher off-MPH DAT BP, likely reflecting low baseline DA levels, as a marker of symptom severity. KW - methylphenidate KW - attention deficit/hyperactivity disorder (ADHD) KW - striatum KW - single photon emission computed tomography (SPECT) KW - responsivity KW - caudate nucleus KW - dopamine transporter (DAT) Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-270862 SN - 1664-0640 VL - 13 ER - TY - JOUR A1 - Augustin, Anne Marie A1 - Kertels, Olivia A1 - Wiegering, Verena A1 - Thurner, Annette A1 - Kickuth, Ralph T1 - Percutaneous implantation of peripherally inserted totally implantable venous access systems in the forearm in adolescent patients JF - Pediatric Radiology N2 - Background Children with different underlying malignant diseases require long-term central venous access. As for port systems in a pectoral position, peripherally implanted port systems in the forearm revealed high levels of technical and clinical success in adult cohorts. Objective To investigate the technical and clinical outcomes of percutaneous central venous port implantation in the forearm in adolescents. Materials and methods Between April 2010 and August 2020, 32 children ages 9 to 17 years with underlying malignancy received 35 totally implantable venous access ports (TIVAPs) in the forearm. All venous port systems were peripherally inserted under ultrasound guidance. Correct catheter placement was controlled by fluoroscopy. As primary endpoints, the technical success, rate of complications and catheter maintenance were analyzed. Secondary endpoints were the side of implantation, vein of catheter access, laboratory results on the day of the procedure, procedural radiation exposure, amount of contrast agent and reasons for port device removal. Results Percutaneous TIVAP placement under sonographic guidance was technically successful in 34 of 35 procedures (97.1%). Procedure-related complications did not occur. During the follow-up, 13,684 catheter days were analyzed, revealing 11 complications (0.8 per 1,000 catheter-duration days), Of these 11 complications, 7 were major and 10 occurred late. In seven cases, the port device had to be removed; removal-related complications did not occur. Conclusion Peripheral TIVAP placement in the forearms of children is a feasible, effective and safe technique with good midterm outcome. As results are comparable with standard access routes, this technique may be offered as an alternative when intermittent venous access is required. KW - adolescents KW - central venous catheter KW - children KW - forearm KW - interventional radiology KW - totally implantable venous access port KW - vascular access Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-324947 VL - 52 IS - 8 ER - TY - JOUR A1 - Augustin, Anne Marie A1 - Lucius, Leonie Johanna A1 - Thurner, Annette A1 - Kickuth, Ralph T1 - Malignant obstruction of the inferior vena cava: clinical experience with the self-expanding Sinus-XL stent system JF - Abdominal Radiology N2 - Purpose To evaluate the technical and clinical outcome of Sinus-XL stent placement in patients with malignant obstruction syndrome of the inferior vena cava. Methods Between October 2010 and January 2021, 21 patients with different malignant primary disease causing inferior vena cava obstruction were treated with Sinus-XL stent implantation. Procedural data, technical and clinical outcome parameters were retrospectively analyzed. Results Technical success was 100%. Analysis of available manometry data revealed a significant reduction of the mean translesional pressure gradient following the procedure (p = 0.008). Reintervention rate was 4.8% (1/21). The available follow-up imaging studies showed primary and primary-assisted stent patency rates of 93% (13/14) and 100% (14/14), respectively. Major complications did not occur. The clinical success regarding lower extremity edema was 82.4% (14/17) for the first and 85.7% (18/21) for the last follow-up. Longer lengths of IVC obstruction were associated with reduced clinical improvement after the procedure (p = 0.025). Improvement of intraprocedural manometry results and lower extremity edema revealed only minor correlation. Ascites and anasarca were not significantly positively affected by the procedure. Conclusion Sinus-XL stent placement in patients with malignant inferior vena cava obstruction showed high technical success and low complication rates. Regarding the clinical outcome, significant symptom improvement could be achieved in lower extremity edema, whereas ascites and anasarca lacked satisfying symptom relief. Based on our results, this procedure should be considered as a suitable therapy in a palliative care setting for patients with advanced malignant disease. KW - endovascular KW - inferior vena cava KW - interventional procedures KW - oncology KW - palliative care KW - stent Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-324951 VL - 47 IS - 10 ER - TY - JOUR A1 - Augustin, Anne Marie A1 - Wolfschmidt, Franziska A1 - Elsässer, Thilo A1 - Sauer, Alexander A1 - Dierks, Alexander A1 - Bley, Thorsten Alexander A1 - Kickuth, Ralph T1 - Color-coded summation images for the evaluation of blood flow in endovascular aortic dissection fenestration JF - BMC Medical Imaging N2 - Background To analyze the benefit of color-coded summation images in the assessment of target lumen perfusion in patients with aortic dissection and malperfusion syndrome before and after fluoroscopy-guided aortic fenestration. Methods Between December 2011 and April 2020 25 patients with Stanford type A (n = 13) or type B dissection (n = 12) and malperfusion syndromes were treated with fluoroscopy-guided fenestration of the dissection flap using a re-entry catheter. The procedure was technically successful in 100% of the cases and included additional iliofemoral stent implantation in four patients. Intraprocedural systolic blood pressure measurements for gradient evaluation were performed in 19 cases. Post-processed color-coded DSA images were obtained from all DSA series before and following fenestration. Differences in time to peak (dTTP) values in the compromised aortic lumen and transluminal systolic blood pressure gradients were analyzed retrospectively. Correlation analysis between dTTP and changes in blood pressure gradients was performed. Results Mean TTP prior to dissection flap fenestration was 6.85 ± 1.35 s. After fenestration, mean TTP decreased significantly to 4.96 ± 0.94 s (p < 0.001). Available systolic blood pressure gradients between the true and the false lumen were reduced by a median of 4.0 mmHg following fenestration (p = 0.031), with significant reductions in Stanford type B dissections (p = 0.013) and minor reductions in type A dissections (p = 0.530). A moderate correlation with no statistical significance was found between dTTP and the difference in systolic blood pressure (r = 0.226; p = 0.351). Conclusions Hemodynamic parameters obtained from color-coded DSA confirmed a significant reduction of TTP values in the aortic target lumen in terms of an improved perfusion in the compromised aortic region. Color-coded DSA might thus be a suitable complementary tool in the assessment of complex vascular patterns prevailing in aortic dissections, especially when blood pressure measurements are not conclusive or feasible. KW - angiography KW - fenestration KW - color-coding KW - aortic dissection KW - DSA KW - endovascular Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-301107 VL - 22 IS - 1 ER - TY - THES A1 - Awadallah, Abdelhaleem Aly Ahmed T1 - The Crew of the Sun Bark in the Amduat T1 - Die Mannschaft der Sonnenbarke im Amduat N2 - The Amduat is one of the most important Netherworld Books which was recorded in various kinds of Ancient Egyptian sources since the beginning of the 18th dynasty, especially the walls of the royal tombs. The main theme of the Amduat is the journey of the sun god through the underworld where the solar bark and its crew is the central scene of the journey. The study focuses on finding the reasons of choosing the crew’s members who manage the sun bark’s journey in the Amduat. It also aims at illustrating the functions and responsibilities of each crew member. Following a historical approach, the study analyzes the Pyramid Texts and Coffin Texts as the most important documents before the New Kingdom, and proceeding to the inscriptions and writings of the monuments which contain portrayals and inscriptions of the Amduat in the New Kingdom. Furthermore, it sheds some light on the solar cycle’s main features and primary aspects, and tries to scrutinize the date, meaning, and symbolisms of the Amduat and its indications in the earlier sources. N2 - Das Amduat ist eines der wichtigsten altägyptischen Unterweltbücher, das seit dem Anfang der 18. Dynastie durch zahlreiche Textzeugen auf unterschiedlichen Schrifträgern, insbesondere aber auf den Wänden der königlichen Gräber, überliefert ist. Die vorliegende Untersuchung gilt der Darstellung der Mannschaft der Sonnenbarke im Amduat. Sie konzentriert sich darauf, die Funktionen und Zuständigkeiten der einzelnen Mannschaftsmitglieder darzulegen und festzustellen, aus welchen Gründen sie jeweils für diese ausgewählt wurden. Des weiteren werden die hauptsächlichen Aspekte und Phasen des Sonnenzyklus ermittelt. Außerdem wird das Entstehungsdatum des Amduat bestimmt und seine Struktur, sein Bedeutungs- und sein Symbolgehalt untersucht. Dabei wird auch auf die Vorgeschichte und historischen Entwicklung des Amduat einge¬gangen, beginnend mit den Vorläuferfassungen einzelner Sprüche in den Pyramiden- und den Sargtexten als den bedeutendsten Texten vor dem Neuen Reich bis hin zu Inschriften und Darstellungen des Neuen Reiches, in denen sich einzelne Szenen und Sprüche aus dem Amduat finden. KW - Amduat KW - Solar bark Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-287115 ER - TY - JOUR A1 - Ayala-Carrillo, Mariana A1 - Farfán, Michelle A1 - Cárdenas-Nielsen, Anahí A1 - Lemoine-Rodríguez, Richard T1 - Are wildfires in the wildland-urban interface increasing temperatures? A land surface temperature assessment in a semi-arid Mexican city JF - Land N2 - High rates of land conversion due to urbanization are causing fragmented and dispersed spatial patterns in the wildland-urban interface (WUI) worldwide. The occurrence of anthropogenic fires in the WUI represents an important environmental and social issue, threatening not only vegetated areas but also periurban inhabitants, as is the case in many Latin American cities. However, research has not focused on the dynamics of the local climate in the WUI. This study analyzes whether wildfires contribute to the increase in land surface temperature (LST) in the WUI of the metropolitan area of the city of Guanajuato (MACG), a semi-arid Mexican city. We estimated the pre- and post-fire LST for 2018–2021. Spatial clusters of high LST were detected using hot spot analysis and examined using ANOVA and Tukey’s post-hoc statistical tests to assess whether LST is related to the spatial distribution of wildfires during our study period. Our results indicate that the areas where the wildfires occurred, and their surroundings, show higher LST. This has negative implications for the local ecosystem and human population, which lacks adequate infrastructure and services to cope with the effects of rising temperatures. This is the first study assessing the increase in LST caused by wildfires in a WUI zone in Mexico. KW - fire KW - grassland KW - urban climate KW - burned area KW - periurban Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-297308 SN - 2073-445X VL - 11 IS - 12 ER - TY - JOUR A1 - Aydinli, Muharrem A1 - Liang, Chunguang A1 - Dandekar, Thomas T1 - Motif and conserved module analysis in DNA (promoters, enhancers) and RNA (lncRNA, mRNA) using AlModules JF - Scientific Reports N2 - Nucleic acid motifs consist of conserved and variable nucleotide regions. For functional action, several motifs are combined to modules. The tool AIModules allows identification of such motifs including combinations of them and conservation in several nucleic acid stretches. AIModules recognizes conserved motifs and combinations of motifs (modules) allowing a number of interesting biological applications such as analysis of promoter and transcription factor binding sites (TFBS), identification of conserved modules shared between several gene families, e.g. promoter regions, but also analysis of shared and conserved other DNA motifs such as enhancers and silencers, in mRNA (motifs or regulatory elements e.g. for polyadenylation) and lncRNAs. The tool AIModules presented here is an integrated solution for motif analysis, offered as a Web service as well as downloadable software. Several nucleotide sequences are queried for TFBSs using predefined matrices from the JASPAR DB or by using one’s own matrices for diverse types of DNA or RNA motif discovery. Furthermore, AIModules can find TFBSs common to two or more sequences. Demanding high or low conservation, AIModules outperforms other solutions in speed and finds more modules (specific combinations of TFBS) than alternative available software. The application also searches RNA motifs such as polyadenylation site or RNA–protein binding motifs as well as DNA motifs such as enhancers as well as user-specified motif combinations (https://bioinfo-wuerz.de/aimodules/; alternative entry pages: https://aimodules.heinzelab.de or https://www.biozentrum.uni-wuerzburg.de/bioinfo/computing/aimodules). The application is free and open source whether used online, on-site, or locally. KW - AIModules KW - nucleic acid motifs KW - DNA Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-301268 VL - 12 IS - 1 ER - TY - JOUR A1 - Bachmann, Jonas A1 - Helbig, Andreas A1 - Crumbach, Merian A1 - Krummenacher, Ivo A1 - Braunschweig, Holger A1 - Helten, Holger T1 - Fusion of Aza‐ and Oxadiborepins with Furans in a Reversible Ring‐Opening Process Furnishes Versatile Building Blocks for Extended π‐Conjugated Materials JF - Chemistry – A European Journal N2 - A modular synthesis of both difurooxa‐ and difuroazadiborepins from a common precursor is demonstrated. Starting from 2,2′‐bifuran, after protection of the positions 5 and 5’ with bulky silyl groups, formation of the novel polycycles proceeds through opening of the furan rings to a dialkyne and subsequent re‐cyclization in the borylation step. The resulting bifuran‐fused diborepins show pronounced stability, highly planar tricyclic structures, and intense blue light emission. Deprotection and transformation into dibrominated building blocks that can be incorporated into π‐extended materials can be performed in one step. Detailed DFT calculations provide information about the aromaticity of the constituent rings of this polycycle. KW - aromaticity KW - boron KW - BN compounds KW - furan KW - polycycles Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-293926 VL - 28 IS - 63 ER - TY - JOUR A1 - Badr, Mohammad A1 - McFleder, Rhonda L. A1 - Wu, Jingjing A1 - Knorr, Susanne A1 - Koprich, James B. A1 - Hünig, Thomas A1 - Brotchie, Jonathan M. A1 - Volkmann, Jens A1 - Lutz, Manfred B. A1 - Ip, Chi Wang T1 - Expansion of regulatory T cells by CD28 superagonistic antibodies attenuates neurodegeneration in A53T-α-synuclein Parkinson’s disease mice JF - Journal of Neuroinflammation N2 - Background Regulatory CD4\(^+\)CD25\(^+\)FoxP3\(^+\) T cells (Treg) are a subgroup of T lymphocytes involved in maintaining immune balance. Disturbance of Treg number and impaired suppressive function of Treg correlate with Parkinson’s disease severity. Superagonistic anti-CD28 monoclonal antibodies (CD28SA) activate Treg and cause their expansion to create an anti-inflammatory environment. Methods Using the AAV1/2-A53T-α-synuclein Parkinson’s disease mouse model that overexpresses the pathogenic human A53T-α-synuclein (hαSyn) variant in dopaminergic neurons of the substantia nigra, we assessed the neuroprotective and disease-modifying efficacy of a single intraperitoneal dose of CD28SA given at an early disease stage. Results CD28SA led to Treg expansion 3 days after delivery in hαSyn Parkinson’s disease mice. At this timepoint, an early pro-inflammation was observed in vehicle-treated hαSyn Parkinson’s disease mice with elevated percentages of CD8\(^+\)CD69\(^+\) T cells in brain and increased levels of interleukin-2 (IL-2) in the cervical lymph nodes and spleen. These immune responses were suppressed in CD28SA-treated hαSyn Parkinson’s disease mice. Early treatment with CD28SA attenuated dopaminergic neurodegeneration in the SN of hαSyn Parkinson’s disease mice accompanied with reduced brain numbers of activated CD4\(^+\), CD8\(^+\) T cells and CD11b\(^+\) microglia observed at the late disease-stage 10 weeks after AAV injection. In contrast, a later treatment 4 weeks after AAV delivery failed to reduce dopaminergic neurodegeneration. Conclusions Our data indicate that immune modulation by Treg expansion at a timepoint of overt inflammation is effective for treatment of hαSyn Parkinson’s disease mice and suggest that the concept of early immune therapy could pose a disease-modifying option for Parkinson’s disease patients. KW - Parkinson’s disease KW - neuroinflammation KW - T cells KW - regulatory T cells KW - neuroprotection Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-300580 VL - 19 ER - TY - JOUR A1 - Bae, Soyeon A1 - Müller, Jörg A1 - Förster, Bernhard A1 - Hilmers, Torben A1 - Hochrein, Sophia A1 - Jacobs, Martin A1 - Leroy, Benjamin M. L. A1 - Pretzsch, Hans A1 - Weisser, Wolfgang W. A1 - Mitesser, Oliver T1 - Tracking the temporal dynamics of insect defoliation by high‐resolution radar satellite data JF - Methods in Ecology and Evolution N2 - Quantifying tree defoliation by insects over large areas is a major challenge in forest management, but it is essential in ecosystem assessments of disturbance and resistance against herbivory. However, the trajectory from leaf-flush to insect defoliation to refoliation in broadleaf trees is highly variable. Its tracking requires high temporal- and spatial-resolution data, particularly in fragmented forests. In a unique replicated field experiment manipulating gypsy moth Lymantria dispar densities in mixed-oak forests, we examined the utility of publicly accessible satellite-borne radar (Sentinel-1) to track the fine-scale temporal trajectory of defoliation. The ratio of backscatter intensity between two polarizations from radar data of the growing season constituted a canopy development index (CDI) and a normalized CDI (NCDI), which were validated by optical (Sentinel-2) and terrestrial laser scanning (TLS) data as well by intensive caterpillar sampling from canopy fogging. The CDI and NCDI strongly correlated with optical and TLS data (Spearman's ρ = 0.79 and 0.84, respectively). The ΔNCDII\(_{Defoliation(A−C)}\) significantly explained caterpillar abundance (R\(^{2}\) = 0.52). The NCDI at critical timesteps and ΔNCDI related to defoliation and refoliation well discriminated between heavily and lightly defoliated forests. We demonstrate that the high spatial and temporal resolution and the cloud independence of Sentinel-1 radar potentially enable spatially unrestricted measurements of the highly dynamic canopy herbivory. This can help monitor insect pests, improve the prediction of outbreaks and facilitate the monitoring of forest disturbance, one of the high priority Essential Biodiversity Variables, in the near future. KW - Sentinel-1 KW - canopy herbivory KW - defoliation severity KW - gypsy moth KW - insect disturbance KW - intra-annual time-series KW - Lymantria dispar KW - remote sensing Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-258222 VL - 13 IS - 1 ER - TY - JOUR A1 - Bahena, Paulina A1 - Daftarian, Narsis A1 - Maroofian, Reza A1 - Linares, Paola A1 - Villalobos, Daniel A1 - Mirrahimi, Mehraban A1 - Rad, Aboulfazl A1 - Doll, Julia A1 - Hofrichter, Michaela A. H. A1 - Koparir, Asuman A1 - Röder, Tabea A1 - Han, Seungbin A1 - Sabbaghi, Hamideh A1 - Ahmadieh, Hamid A1 - Behboudi, Hassan A1 - Villanueva-Mendoza, Cristina A1 - Cortés-Gonzalez, Vianney A1 - Zamora-Ortiz, Rocio A1 - Kohl, Susanne A1 - Kuehlewein, Laura A1 - Darvish, Hossein A1 - Alehabib, Elham A1 - La Arenas-Sordo, Maria de Luz A1 - Suri, Fatemeh A1 - Vona, Barbara A1 - Haaf, Thomas T1 - Unraveling the genetic complexities of combined retinal dystrophy and hearing impairment JF - Human Genetics N2 - Usher syndrome, the most prevalent cause of combined hereditary vision and hearing impairment, is clinically and genetically heterogeneous. Moreover, several conditions with phenotypes overlapping Usher syndrome have been described. This makes the molecular diagnosis of hereditary deaf-blindness challenging. Here, we performed exome sequencing and analysis on 7 Mexican and 52 Iranian probands with combined retinal degeneration and hearing impairment (without intellectual disability). Clinical assessment involved ophthalmological examination and hearing loss questionnaire. Usher syndrome, most frequently due to biallelic variants in MYO7A (USH1B in 16 probands), USH2A (17 probands), and ADGRV1 (USH2C in 7 probands), was diagnosed in 44 of 59 (75%) unrelated probands. Almost half of the identified variants were novel. Nine of 59 (15%) probands displayed other genetic entities with dual sensory impairment, including Alström syndrome (3 patients), cone-rod dystrophy and hearing loss 1 (2 probands), and Heimler syndrome (1 patient). Unexpected findings included one proband each with Scheie syndrome, coenzyme Q10 deficiency, and pseudoxanthoma elasticum. In four probands, including three Usher cases, dual sensory impairment was either modified/aggravated or caused by variants in distinct genes associated with retinal degeneration and/or hearing loss. The overall diagnostic yield of whole exome analysis in our deaf-blind cohort was 92%. Two (3%) probands were partially solved and only 3 (5%) remained without any molecular diagnosis. In many cases, the molecular diagnosis is important to guide genetic counseling, to support prognostic outcomes and decisions with currently available and evolving treatment modalities. KW - Usher syndrome KW - hearing impairment KW - combined retinal dystrophy Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-267750 SN - 1432-1203 VL - 141 IS - 3-4 ER - TY - JOUR A1 - Balakrishnan, Ashwin A1 - Hemmen, Katherina A1 - Choudhury, Susobhan A1 - Krohn, Jan-Hagen A1 - Jansen, Kerstin A1 - Friedrich, Mike A1 - Beliu, Gerti A1 - Sauer, Markus A1 - Lohse, Martin J. A1 - Heinze, Katrin G. T1 - Unraveling the hidden temporal range of fast β2-adrenergic receptor mobility by time-resolved fluorescence JF - Communications Biology N2 - G-protein-coupled receptors (GPCRs) are hypothesized to possess molecular mobility over a wide temporal range. Until now the temporal range has not been fully accessible due to the crucially limited temporal range of available methods. This in turn, may lead relevant dynamic constants to remain masked. Here, we expand this dynamic range by combining fluorescent techniques using a spot confocal setup. We decipher mobility constants of β\(_{2}\)-adrenergic receptor over a wide time range (nanosecond to second). Particularly, a translational mobility (10 µm\(^{2}\)/s), one order of magnitude faster than membrane associated lateral mobility that explains membrane protein turnover and suggests a wider picture of the GPCR availability on the plasma membrane. And a so far elusive rotational mobility (1-200 µs) which depicts a previously overlooked dynamic component that, despite all complexity, behaves largely as predicted by the Saffman-Delbrück model. KW - G-protein-coupled receptors KW - molecular mobility KW - temporal range Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-301140 VL - 5 IS - 1 ER - TY - THES A1 - Bangalore, Disha Mohan T1 - Mechanistic studies of protein-DNA interactions by single molecule atomic force microscopy T1 - Mechanistische Untersuchungen von protein-DNA-Wechselwirkungen mittels Einzelmolekül-Rasterkraftmikroskopie N2 - Protein-DNA interactions are central to many biological processes and form the bedrock of gene transcription, DNA replication, and DNA repair processes. Many proteins recognize specific sequences in DNA- a restriction enzyme must only cut at the correct sequence and a transcription factor should bind at its consensus sequence. Some proteins are designed to bind to specific structural or chemical features in DNA, such as DNA repair proteins and some DNA modifying enzymes. Target-specific DNA binding proteins initially bind to non-specific DNA and then search for their target sites through different types of diffusion mechanisms. Atomic force microscopy (AFM) is a single-molecule technique that is specifically well-suited to resolve the distinct states of target-specific as well as nonspecific protein-DNA interactions that are vital for a deeper insight into the target site search mechanisms of these enzymes. In this thesis, protein systems involved in epigenetic regulation, base excision repair (BER), and transcription are investigated by single-molecule AFM analyses complemented by biochemical and biophysical experiments. The first chapter of this thesis narrates the establishment of a novel, user-unbiased MatLab-based tool for automated DNA bend angle measurements on AFM data. This tool has then been employed to study the initial lesion detection step of several DNA glycosylases. These results promoted a model describing the altered plasticities of DNA at the target lesions of DNA glycosylases as the fundamental mechanism for their enhanced efficiency of lesion detection. In the second chapter of this thesis, the novel automated tool has been further extended to provide protein binding positions on the DNA along with corresponding DNA bend angles and applied to the study of DNMT3A DNA methyltransferase. These AFM studies revealed preferential co-methylation at specific, defined distances between two CpG sites by the enzyme and when combined with biochemical analyses and structural modelling supported novel modes of CpG co-methylation by DNMT3A. In the third chapter of this thesis, the role of 8-oxo-guanine glycosylase (hOGG1) in Myc-mediated transcription initiation has been investigated. AFM analyses revealed that in the presence of oxidative damage in DNA, Myc is recruited to its target site (E-box) by hOGG1 through direct protein-protein interactions, specifically under oxidizing conditions. Intriguingly, oxidation of hOGG1 was further observed to result in dimerization of hOGG1, which may also play a role in the mechanism of transcription regulation by hOGG1 under oxidative stress. N2 - Protein-DNA-Wechselwirkungen sind für viele biologische Prozesse von zentraler Bedeutung und bilden die Grundlage der Gentranskription, der DNA-Replikation und der DNA-Reparaturprozesse. Viele Proteine erkennen bestimmte Bassen-Sequenzen in der DNA - ein Restriktionsenzym darf nur an der richtigen Sequenz schneiden, und ein Transkriptionsfaktor sollte an seine Konsenssequenz binden. Einige Proteine sind darauf ausgelegt, an bestimmte strukturelle oder chemische Merkmale der DNA zu binden, wie z. B. DNA-Reparaturproteine und verschiedene DNA-modifizierende Enzyme. Zielspezifische DNA-bindende Proteine binden zunächst an unspezifische DNA und suchen dann durch verschiedene Arten von Diffusionsmechanismen nach ihren Zielstellen in der DNA. AFM ist eine Einzelmolekültechnik, die besonders gut geeignet ist, um die verschiedenen Zustände sowohl der spezifisch gebundenen als auch unspezifischen Protein-DNA-Wechselwirkungen aufzulösen, die für einen tieferen Einblick in die Mechanismen der Zielstellensuche unerlässlich sind. In dieser Arbeit werden Proteinsysteme, die an der epigenetischen Regulation, der Basenexzisionsreparatur (BER) und der Transkription beteiligt sind, durch Einzelmolekül- AFM-Analysen untersucht, und diese Studien werden durch biochemische und biophysikalische Experimente komplementiert. ... KW - Transcription KW - atomic force microscopy KW - protein-DNA interactions Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-252047 ER - TY - THES A1 - Bangelesa, Freddy Fefe T1 - Impacts of climate variability and change on Maize (\(Zea\) \(mays\)) production in tropical Africa T1 - Auswirkungen von Klimavariabilität und Veränderungen auf die Mais (\(Zea\) \(mays\)) Produktion im tropischen Afrika N2 - Climate change is undeniable and constitutes one of the major threats of the 21st century. It impacts sectors of our society, usually negatively, and is likely to worsen towards the middle and end of the century. The agricultural sector is of particular concern, for it is the primary source of food and is strongly dependent on the weather. Considerable attention has been given to the impact of climate change on African agriculture because of the continent’s high vulnerability, which is mainly due to its low adaptation capac- ity. Several studies have been implemented to evaluate the impact of climate change on this continent. The results are sometimes controversial since the studies are based on different approaches, climate models and crop yield datasets. This study attempts to contribute substantially to this large topic by suggesting specific types of climate pre- dictors. The study focuses on tropical Africa and its maize yield. Maize is considered to be the most important crop in this region. To estimate the effect of climate change on maize yield, the study began by developing a robust cross-validated multiple linear regression model, which related climate predictors and maize yield. This statistical trans- fer function is reputed to be less prone to overfitting and multicollinearity problems. It is capable of selecting robust predictors, which have a physical meaning. Therefore, the study combined: large-scale predictors, which were derived from the principal component analysis of the monthly precipitation and temperature; traditional local-scale predictors, mainly, the mean precipitation, mean temperature, maximum temperature and minimum temperature; and the Water Requirement Satisfaction Index (WRSI), derived from the specific crop (maize) water balance model. The projected maize-yield change is forced by a regional climate model (RCM) REMO under two emission scenarios: high emission scenario (RCP8.5) and mid-range emission scenario (RCP4.5). The different effects of these groups of predictors in projecting the future maize-yield changes were also assessed. Furthermore, the study analysed the impact of climate change on the global WRSI. The results indicate that almost 27 % of the interannual variability of maize production of the entire region is explained by climate variables. The influence of climate predictors on maize-yield production is more pronounced in West Africa, reaching 55 % in some areas. The model projection indicates that the maize yield in the entire region is expected to decrease by the middle of the century under an RCP8.5 emission scenario, and from the middle of the century to the end of the century, the production will slightly recover but will remain negative (around -10 %). However, in some regions of East Africa, a slight increase in maize yield is expected. The maize-yield projection under RCP4.5 remains relatively unchanged compared to the baseline period (1982-2016). The results further indicate that large-scale predictors are the most critical drivers of the global year-to-year maize-yield variability, and ENSO – which is highly correlated with the most important predictor (PC2) – seems to be the physical process underlying this variability. The effects of local predictors are more pronounced in the eastern parts of the region. The impact of the future climate change on WRSI reveals that the availability of maize water is expected to decrease everywhere, except in some parts of eastern Africa. N2 - Weil die Folgen des Klimawandels die Lebensgrundlagen aller Lebewesen beeinträchtigen, ist der Klimawandel ein sehr relevantes Thema des 21. Jahrhunderts. Seine negativen Effekte betreffen bereits viele Sektoren unserer Gesellschaft und die Prognosen zeigen, dass sich die Auswirkungen des Klimawandels Mitte und Ende dieses Jahrhunderts ver- schärfen werden. Die Landwirtschaft ist besonders betroffen, denn sie ist sehr abhängig vom Klima. Da die Landwirtschaft als Hauptnahrungsquelle der Menschen gilt, ist es erforderlich sich mit den Problemen des Klimawandels rechtzeitig zu beschäftigen, um in der Zukunft die Ernährung der Menschheit gewährleisten zu können. Viele Forscher beschäftigen sich mit den Folgen des Klimawandels in der Landwirtschaft. Besonders in Afrika wurde viel geforscht, weil die Landwirtschaft in Afrika sich technisch schlecht anpassen kann, um die Schwierigkeiten, die mit dem Klimawandel einhergehen, zu über- winden. Mehrere Studien wurden durchgeführt, um die Auswirkungen des Klimawan- dels in Afrika zu bewerten. Aufgrund der unterschiedlichen verwendeten statistischen Methoden, Modellierungen der Umweltprozesse oder Ertragsdaten sind die Ergebnisse teilweise kontrovers. Diese Studie versucht, einen wesentlichen Beitrag zum Einfluss des Klimawandels auf die Landwirtschaft in Westafrika zu leisten, indem sie spezifis- che Methoden vorschlägt, um das Klima der Zukunft projizieren zu können. Diese Studie behandelt Maiserträge in den Tropen Afrikas, da Mais dort die wichtigste Nutzpflanze ist. Um die Auswirkungen des Klimawandels auf den Maisertrag abzuschätzen, wurde ein Regressionsmodell (aus dem Englischen: robust cross-validated multiple) entwickelt, das Klimaprädiktoren und Maiserträge koppelt. Diese entwickelte statistische Übertra- gungsfunktion ist zuverlässiger bei Schwierigkeiten mit der Überanpassung und der Mul- tikollinearität. Außerdem ist sie auch in der Lage robuste Prädiktoren mit physikalischer Bedeutung auszuwählen. Deshalb wurden in der Studie großräumige und lokale Prädik- toren kombiniert. Erstere entstammen der Analyse der Komponenten des monatlichen Niederschlags und der Temperatur, letztere basieren basieren auf den mittleren und Ex- tremtemperaturen sowie dem mittleren Niederschlag. Zusätzlich zu den Prädiktoren wurde ein Index der Wasserbedarfsdeckung (Water Requirement Satisfaction Index, WRSI) verwendet, der auf einem Wasserhaushaltsmodell der Nutzpflanzen basiert. Die erwartete Mais-Ertragsänderung wird mithilfe eines regionalen Klimamodells (RCM) REMO für die Emissionsszenarien RCP8.5 und RCP4.5 simuliert. Die einzelnen Effekte der Prädiktoren- Gruppen bei der Prognose der zukünftigen Mais-Ertragsänderungen wurden ebenfalls bewertet. Darüber hinaus analysierte die Studie die Auswirkungen des Klimawandels auf den WSRI. Durchschnittlich zeigen die Ergebnisse eine jährliche Maisproduktionsän- derung von ca. 27 % in der gesamten Region. Diese Änderung, die in Westafrika mit ca. 55 % stärker ausgeprägt ist, ist eine Folge des Klimawandels. Die Simulationen des Mod- ells anhand von RCP8.5-Emissionsszenario zeigen auch, dass der Maisertrag der gesamten Region voraussichtlich bis Mitte des Jahrhunderts abnehmen wird. Danach findet eine geringe Ertragserhöhung statt, die jedoch um ca. 10 % unter der ursprünglichen Menge liegt. Im Gegensatz zu Westafrika wird in einigen Regionen Ostafrikas wird ein leichter Anstieg des Maisertrags simuliert. Die Mais-Ertragsprognose für die gesamte Region mittels RCP4.5 bleibt relativ unverändert im Vergleich zum ursprünglichen Ertrag. Die Ergebnisse zeigen weiterhin, dass die großräumigen Prädiktoren die wichtigste Rolle bei den globalen jährlichen Maisertragsschwankungen spielen. ENSO ist stark mit dem wichtigsten Prädiktor korreliert, was auf den physikalischen Prozess hinweist, der diese Ertragsänderung erklärt. Die Relevanz der lokalen Prädiktoren ist in den östlichen Re- gionen Afrikas stärker ausgeprägt. Sie beeinflussen den WRSI, sodass der Maisertrag im Verhältnis zur Wasserverfügbarkeit voraussichtlich überall abnehmen wird. Ausgenom- men sind einigen Regionen Ostafrikas. KW - Climate change KW - Food security KW - Modelling Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-259347 ER - TY - JOUR A1 - Banicka, Veronika A1 - Martens, Marie Christine A1 - Panzer, Rüdiger A1 - Schrama, David A1 - Emmert, Steffen A1 - Boeckmann, Lars A1 - Thiem, Alexander T1 - Homozygous CRISPR/Cas9 knockout generated a novel functionally active exon 1 skipping XPA variant in melanoma cells JF - International Journal of Molecular Sciences N2 - Defects in DNA repair pathways have been associated with an improved response to immune checkpoint inhibition (ICI). In particular, patients with the nucleotide excision repair (NER) defect disease Xeroderma pigmentosum (XP) responded impressively well to ICI treatment. Recently, in melanoma patients, pretherapeutic XP gene expression was predictive for anti-programmed cell death-1 (PD-1) ICI response. The underlying mechanisms of this finding are still to be revealed. Therefore, we used CRISPR/Cas9 to disrupt XPA in A375 melanoma cells. The resulting subclonal cell lines were investigated by Sanger sequencing. Based on their genetic sequence, candidates from XPA exon 1 and 2 were selected and further analyzed by immunoblotting, immunofluorescence, HCR and MTT assays. In XPA exon 1, we established a homozygous (c.19delG; p.A7Lfs*8) and a compound heterozygous (c.19delG/c.19_20insG; p.A7Lfs*8/p.A7Gfs*55) cell line. In XPA exon 2, we generated a compound heterozygous mutated cell line (c.206_208delTTG/c.208_209delGA; p.I69_D70delinsN/p.D70Hfs*31). The better performance of the homozygous than the heterozygous mutated exon 1 cells in DNA damage repair (HCR) and post-UV-C cell survival (MTT), was associated with the expression of a novel XPA protein variant. The results of our study serve as the fundamental basis for the investigation of the immunological consequences of XPA disruption in melanoma. KW - DNA repair KW - nucleotide excision repair KW - XPA KW - CRISPR KW - knockout KW - protein variant KW - melanoma KW - A375 Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-290427 SN - 1422-0067 VL - 23 IS - 19 ER - TY - JOUR A1 - Barahona de Brito, Carlotta A1 - Klein-Hessling, Stefan A1 - Serfling, Edgar A1 - Patra, Amiya Kumar T1 - Hematopoietic stem and progenitor cell maintenance and multiple lineage differentiation is an integral function of NFATc1 JF - Cells N2 - Hematopoietic stem and progenitor cell (HSPC) maintenance and the differentiation of various lineages is a highly complex but precisely regulated process. Multiple signaling pathways and an array of transcription factors influence HSPC maintenance and the differentiation of individual lineages to constitute a functional hematopoietic system. Nuclear factor of activated T cell (NFAT) family transcription factors have been studied in the context of development and function of multiple mature hematopoietic lineage cells. However, until now their contribution in HSPC physiology and HSPC differentiation to multiple hematopoietic lineages has remained poorly understood. Here, we show that NFAT proteins, specifically NFATc1, play an indispensable role in the maintenance of HSPCs. In the absence of NFATc1, very few HSPCs develop in the bone marrow, which are functionally defective. In addition to HSPC maintenance, NFATc1 also critically regulates differentiation of lymphoid, myeloid, and erythroid lineage cells from HSPCs. Deficiency of NFATc1 strongly impaired, while enhanced NFATc1 activity augmented, the differentiation of these lineages, which further attested to the vital involvement of NFATc1 in regulating hematopoiesis. Hematopoietic defects due to lack of NFATc1 activity can lead to severe pathologies such as lymphopenia, myelopenia, and a drastically reduced lifespan underlining the critical role NFATc1 plays in HSPC maintenance and in the differentaion of various lineages. Our findings suggest that NFATc1 is a critical component of the myriad signaling and transcriptional regulators that are essential to maintain normal hematopoiesis. KW - hematopoiesis KW - HSC KW - lineage differentiation KW - NFATc1 Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-278809 SN - 2073-4409 VL - 11 IS - 13 ER - TY - JOUR A1 - Barahona de Brito, Carlotta A1 - Patra, Amiya Kumar T1 - NFAT factors are dispensable for the development but are critical for the maintenance of Foxp3\(^+\) regulatory T cells JF - Cells N2 - The transcription factors of the nuclear factor of activated T cell (NFAT) family play a crucial role in multiple aspects of T cell function. It has recently been reported that NFATs play an important role in the suppressive function of CD4\(^+\)CD25\(^+\)Foxp3\(^+\) regulatory T (T\(_{reg}\)) cells. In this study, we have investigated the role of NFATs in the thymic development of T\(_{reg}\) cells in mice. We show that NFAT factors are dispensable for the development of Foxp3\(^+\) T\(_{reg}\) cells in the thymus but are critical for the maintenance of both the phenotype and survival of T\(_{reg}\) cells in the thymus as well as in peripheral lymphoid organs. Specifically, the homeostasis of CD4\(^+\)CD25\(^+\)Foxp3\(^+\) but not the CD4\(^+\)CD25\(^-\)Foxp3\(^+\) fraction is severely perturbed when NFAT signaling is blocked, leading to a strongly reduced T\(_{reg}\) population. We underscored this intriguing effect of NFAT on CD4\(^+\)CD25\(^+\)Foxp3\(^+\) T\(_{reg}\) cells to the disruption of survival signals provided by interleukin 2 (IL-2). Accordingly, blocking T\(_{reg}\) cell death by abolishing the activity of pro-apoptotic Bcl-2 family member Bim, compensated for the survival defects induced due to a lack of NFAT-IL-2-IL-2R signaling. Inhibition of NFAT activity led to a strong reduction in the number of Foxp3\(^+\) T\(_{reg}\) cells; however, it did not influence the level of Foxp3 expression on an individual cell basis. In addition, we show a differential effect of IL-2 and IL-7 signaling on Foxp3\(^+\) T\(_{reg}\) versus CD4\(^+\)CD25\(^-\) T cell development, again underlining the dispensability of NFAT signaling in the development, but not in the maintenance of Foxp3\(^+\) T\(_{reg}\) cells. KW - thymocytes KW - NFAT KW - cyclosporine A KW - T\(_{reg}\) and Foxp3 Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-270668 SN - 2073-4409 VL - 11 IS - 9 ER - TY - JOUR A1 - Barak, Arvind A1 - Dhiman, Nishant A1 - Sturm, Floriane A1 - Rauch, Florian A1 - Lakshmanna, Yapamanu Adithya A1 - Findlay, Karen S. A1 - Beeby, Andrew A1 - Marder, Todd B. A1 - Umapathy, Siva T1 - Excited‐State Intramolecular Charge‐Transfer Dynamics in 4‐Dimethylamino‐4′‐cyanodiphenylacetylene: An Ultrafast Raman Loss Spectroscopic Perspective JF - ChemPhotoChem N2 - Photo‐initiated intramolecular charge transfer (ICT) processes play a pivotal role in the excited state reaction dynamics in donor‐bridge‐acceptor systems. The efficacy of such a process can be improved by modifying the extent of π‐conjugation, relative orientation/twists of the donor/acceptor entities and polarity of the environment. Herein, 4‐dimethylamino‐4′‐cyanodiphenylacetylene (DACN‐DPA), a typical donor‐π‐bridge‐acceptor system, was chosen to unravel the role of various internal coordinates that govern the extent of photo‐initiated ICT dynamics. Transient absorption (TA) spectra of DACN‐DPA in n‐hexane exhibit a lifetime of >2 ns indicating the formation of a triplet state while, in acetonitrile, a short time‐constant of ∼2 ps indicates the formation of charge transferred species. Ultrafast Raman loss spectroscopy (URLS) measurements show distinct temporal and spectral dynamics of Raman bands associated with C≡C and C=C stretching vibrations. The appearance of a new band at ∼1492 cm\(^{−1}\) in acetonitrile clearly indicates structural modification during the ultrafast ICT process. Furthermore, these observations are supported by TD‐DFT computations. KW - charge transfer KW - ultrafast Raman loss spectroscopy KW - 4-dimethylamino-4′-cyanodiphenylacetylene KW - transient absorption KW - TD-DFT Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-312280 VL - 6 IS - 12 ER - TY - THES A1 - Barth, Dominik T1 - Computation of multi-branch-point covers and applications in Galois theory T1 - Berechnung von Mehrpunktüberlagerungen und Anwendungen in der Galoistheorie N2 - We present a technique for computing multi-branch-point covers with prescribed ramification and demonstrate the applicability of our method in relatively large degrees by computing several families of polynomials with symplectic and linear Galois groups. As a first application, we present polynomials over \(\mathbb{Q}(\alpha,t)\) for the primitive rank-3 groups \(PSp_4(3)\) and \(PSp_4(3).C_2\) of degree 27 and for the 2-transitive group \(PSp_6(2)\) in its actions on 28 and 36 points, respectively. Moreover, the degree-28 polynomial for \(PSp_6(2)\) admits infinitely many totally real specializations. Next, we present the first (to the best of our knowledge) explicit polynomials for the 2-transitive linear groups \(PSL_4(3)\) and \(PGL_4(3)\) of degree 40, and the imprimitive group \(Aut(PGL_4(3))\) of degree 80. Additionally, we negatively answer a question by König whether there exists a degree-63 rational function with rational coefficients and monodromy group \(PSL_6(2)\) ramified over at least four points. This is achieved due to the explicit computation of the corresponding hyperelliptic genus-3 Hurwitz curve parameterizing this family, followed by a search for rational points on it. As a byproduct of our calculations we obtain the first explicit \(Aut(PSL_6(2))\)-realizations over \(\mathbb{Q}(t)\). At last, we present a technique by Elkies for bounding the transitivity degree of Galois groups. This provides an alternative way to verify the Galois groups from the previous chapters and also yields a proof that the monodromy group of a degree-276 cover computed by Monien is isomorphic to the sporadic 2-transitive Conway group \(Co_3\). N2 - Wir stellen eine Technik zur Berechnung von Mehrpunktüberlagerungen mit vorgeschriebener Verzweigung vor und demonstrieren die Anwendbarkeit unserer Methode in relativ großen Graden durch die Berechnung mehrerer Familien von Polynomen mit symplektischen und linearen Galoisgruppen. Als erste Anwendung präsentieren wir Polynome über \(\mathbb{Q}(\alpha,t)\) für die primitiven Rang-3-Gruppen \(PSp_4(3)\) und \(PSp_4(3).C_2\) vom Grad 27 und für die 2-fach transitive Gruppe \(PSp_6(2)\) in ihren Operationen auf 28 bzw. 36 Punkten. Außerdem lässt das Polynom vom Grad 28 für \(PSp_6(2)\) unendlich viele total-reelle Spezialisierungen zu. Als Nächstes präsentieren wir die (unseres Wissens nach) ersten expliziten Polynome für die 2-fach transitiven linearen Gruppen \(PSL_4(3)\) und \(PGL_4(3)\) vom Grad 40 und die imprimitive Gruppe \(Aut(PGL_4(3))\) vom Grad 80. Zusätzlich geben wir eine negative Antwort auf die Frage von König, ob es eine rationale Funktion vom Grad 63 mit rationalen Koeffizienten gibt, die über mindestens vier Punkten verzweigt ist und Monodromiegruppe \(PSL_6(2)\) besitzt. Dies wird durch die explizite Berechnung der entsprechenden hyperelliptischen Geschlecht-3 Hurwitzkurve erreicht, die diese Familie parametrisiert, gefolgt von einer Suche nach rationalen Punkten auf ihr. Als Nebenprodukt unserer Berechnungen erhalten wir die ersten expliziten \(Aut(PSL_6(2))\)-Realisierungen über \(\mathbb{Q}(t)\). Schließlich stellen wir eine Technik von Elkies zur Beschränkung des Transitivitätsgrades von Galoisgruppen vor. Diese bietet einen alternativen Weg, die Galoisgruppen aus den vorherigen Kapiteln zu verifizieren und liefert auch einen Beweis dafür, dass die Monodromiegruppe einer von Monien berechneten Grad-276 Überlagerung isomorph zur sporadischen 2-fach transitiven Conway-Gruppe \(Co_3\) ist. KW - Galois-Theorie KW - Hurwitz-Raum KW - Monodromie KW - Überlagerung KW - Belyi map Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-277025 ER - TY - THES A1 - Bathe-Peters, Marc T1 - Spectroscopic approaches for the localization and dynamics of β\(_1\)- and β\(_2\)-adrenergic receptors in cardiomyocytes T1 - Spektroskopieansätze zur Bestimmung der Lokalisation und Dynamiken von β\(_1\)- und β\(_2\)-Adrenozeptoren in Kardiomyozyten N2 - In the heart the β\(_1\)-adrenergic receptor (AR) and the β\(_2\)-AR, two prototypical G protein-coupled receptors (GPCRs), are both activated by the same hormones, namely adrenaline and noradrenaline. Both receptors couple to stimulatory G\(_s\) proteins, mediate an increase in cyclic adenosine monophosphate (cAMP) and influence the contractility and frequency of the heart upon stimulation. However, activation of the β\(_1\)-AR, not the β\(_2\)-AR, lead to other additional effects, such as changes in gene transcription resulting in cardiac hypertrophy, leading to speculations on how distinct effects can arise from receptors coupled to the same downstream signaling pathway. In this thesis the question of whether this distinct behavior may originate from a differential localization of these two receptors in adult cardiomyocytes is addressed. Therefore, fluorescence spectroscopy tools are developed and implemented in order to elucidate the presence and dynamics of these endogenous receptors at the outer plasma membrane as well as on the T-tubular network of intact adult cardiomyocytes. This allows the visualization of confined localization and diffusion of the β\(_2\)-AR to the T-tubular network at endogenous expression. In contrast, the β\(_1\)-AR is found diffusing at both the outer plasma membrane and the T-tubules. Upon overexpression of the β\(_2\)-AR in adult transgenic cardiomyocytes, the receptors experience a loss of this compartmentalization and are also found at the cell surface. These data suggest that distinct signaling and functional effects can be controlled by specific cell surface targeting of the receptor subtypes. The tools at the basis of this thesis work are a fluorescent adrenergic antagonist in combination of fluorescence fluctuation spectroscopy to monitor the localization and dynamics of the lowly expressed adrenergic receptors. Along the way to optimizing these approaches, I worked on combining widefield and confocal imaging in one setup, as well as implementing a stable autofocus mechanism using electrically tunable lenses. N2 - Im Herzen werden der β\(_1\)-adrenerge Rezeptor (AR) und der β\(_2\)-AR, zwei prototypische GPCR, durch die Hormone Adrenalin und Noradrenalin aktiviert. Dabei interagieren beide Rezeptoren mit dem stimulatorischen G\(_s\) Protein, bewirken eine Erhöhung des cyclischen Adenosinmonophosphates (cAMP) und beeinflussen die Kontraktionskraft und Frequenz des Herzens nach einem Stimulus. Jedoch hat die Aktivierung des β\(_1\)-ARs, nicht des β\(_2\)-ARs, auch weitere Effekte, wie z.B. Veränderungen in der Transkription von Genen. Dies wiederum führt zu Spekulationen, wie solch unterschiedliche Effekte von Rezeptoren hervorgerufen werden können, die gleiche Signalwege bedienen. In dieser Arbeit wird untersucht, ob dieses unterschiedliche Verhalten durch eine ungleiche Verteilung dieser beiden Rezeptoren in adulten Kardiomyozyten hervorgerufen werden könnte. Dazu wird die Lokalisation und die Dynamik dieser endogenen Rezeptoren in der Plasmamembran sowie im T-tubulären Netzwerk von intakten adulten Kardiomyozyten, unter Entwicklung und Verwendung hochsensitiver Fluoreszenzspektroskopiemethoden, bestimmt. Dies ermöglicht die örtliche und dynamische Eingrenzung des β\(_2\)-adrenergen Rezeptors unter endogener Expression ausschließlich auf das T-tubuläre Netzwerk. Dementgegen stellt sich heraus, dass sich der β\(_1\)-adrenerge Rezeptor ubiquitär auf der äußeren Membran und den T-Tubuli befindet und diffundiert. In β\(_2\)-AR überexprimierenden transgenen Kardiomyozyten hingegen werden diese Kompartments nicht beibehalten und es findet eine Umverteilung der Rezeptoren, auch unter Einbezug der Zelloberfläche, statt. Diese Daten können stärker darauf hindeuten, dass einige Rezeptorsubtypen sich gezielt und spezifisch bestimmte Zelloberflächen aussuchen, um somit ihre verschiedenen Signale und funktionären Effekte erzeugen zu können. Zu den Techniken, die in dieser Arbeit die Bestimmung der Lokalisation und der Dynamiken der niedrig exprimierten adrenergen Rezeptoren zulassen, gehört die Anwendung von Fluoreszenzspektroskopiemethoden in Kombination mit einem fluoreszierenden β-adrenergen Antagonisten. Weitere Techniken, die im Rahmen dieser Arbeit entwickelt wurden und in weiterführenden Studien aufschlussreiche Erkenntnisse liefern könnten, umfassen die Entwicklung eines Setups aus einer Kombination aus Weitfeld- und Konfokalmikroskopie und die Implementierung eines stabilen Autofokus mit Hilfe einer elektrisch veränderbaren Linse. KW - G-Protein gekoppelte Rezeptoren KW - Beta-Adrenozeptor KW - Kardiomyozyt KW - Fluoreszenzmikroskopie KW - Fluoreszenzkorrelationsspektroskopie KW - Fluorescence KW - Fluorescence Microscopy KW - G Protein-Coupled Receptor KW - Autofocus KW - Microscopy KW - Beta-Adrenergic Receptor KW - Cardiomyocyte KW - Fluorescence Correlation Spectroscopy KW - FCS KW - GPCR Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-258126 ER - TY - JOUR A1 - Bauer, Hannah A1 - Concha Mendoza, Gustavo Andrés A1 - Kreienbrock, Lothar A1 - Hartmann, Maria A1 - Frickmann, Hagen A1 - Kann, Simone T1 - Prevalence of common diseases in Indigenous people in Colombia JF - Tropical Medicine and Infectious Disease N2 - The Indigenous tribe called the Wiwa lives retracted in the Sierra Nevada de Santa Marta, Colombia. Little is known about their health status and whether the health care system in place covers their needs. In 2017 and 2018, a permanent physician was in charge for the Wiwa. Diseases and complaints were registered, ranked, and classified with the ICD-10 coding. Datasets from the Indigenous health care provider Dusakawi, collected from local health points and health brigades travelling sporadically into the fields for short visits, were compared. Furthermore, a list of provided medication was evaluated regarding the recorded needs. The most common complaints found were respiratory, infectious and parasitic, and digestive diseases. The top ten diagnoses collected in the health points and in the health brigade datasets were similar, although with a different ranking. The available medication showed a basic coverage only, with a critical lack of treatment for many severe, chronic, and life-threatening diseases. Most of the detected diseases in the Indigenous population are avoidable by an improvement in health care access, an expansion of the provided medication, and an increase in knowledge, hygiene, and life standards. KW - Chagas disease KW - indigenous KW - public health KW - Colombia KW - Sierra Nevada KW - neglected groups Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-278953 SN - 2414-6366 VL - 7 IS - 6 ER - TY - JOUR A1 - Bauer, Nikolai A1 - Sperlich, Billy A1 - Holmberg, Hans-Christer A1 - Engel, Florian A. T1 - Effects of High-Intensity Interval Training in School on the Physical Performance and Health of Children and Adolescents: A Systematic Review with Meta-Analysis JF - Sports Medicine - Open N2 - Objectives To assess the impact of HIIT performed at school, i.e. both in connection with physical education (intra-PE) and extracurricular sports activities (extra-PE), on the physical fitness and health of children and adolescents. Methods PubMed and SPORTDiscus were searched systematically utilizing the following criteria for inclusion: (1) healthy children and adolescents (5–18 years old) of normal weight; (2) HIIT performed intra- and/or extra-PE for at least 5 days at an intensity ≥ 80% of maximal heart rate (HR\(_{max}\)) or peak oxygen uptake (VO\(_{2peak}\)) or as Functional HIIT; (3) comparison with a control (HIIT versus alternative interventions); and (4) pre- and post-analysis of parameters related to physical fitness and health. The outcomes with HIIT and the control interventions were compared utilizing Hedges’ g effect size (ES) and associated 95% confidence intervals. Results Eleven studies involving 707 participants who performed intra-PE and 388 participants extra-PE HIIT were included. In comparison with the control interventions, intra-PE HIIT improved mean ES for neuromuscular and anaerobic performance (ES jump performance: 5.89 ± 5.67 (range 1.88–9.90); ES number of push-ups: 6.22 (range n.a.); ES number of sit-ups: 2.66 ± 2.02 (range 1.24–4.09)), as well as ES fasting glucose levels (− 2.68 (range n.a.)) more effectively, with large effect sizes. Extra-PE HIIT improved mean ES for neuromuscular and anaerobic performance (ES jump performance: 1.81 (range n.a.); ES number of sit-ups: 2.60 (range n.a.)) to an even greater extent, again with large effect sizes. Neither form of HIIT was more beneficial for parameters related to cardiorespiratory fitness than the control interventions. Conclusion Compared to other forms of exercise (e.g. low-to-moderate-intensity running or walking), both intra- and extra-PE HIIT result in greater improvements in neuromuscular and anaerobic performance, as well as in fasting levels of glucose in school children. KW - adolescents KW - health-related fitness KW - physical fitness KW - children KW - high-intensity interval training KW - physical education Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-301205 SN - 2199-1170 VL - 8 IS - 1 ER - TY - JOUR A1 - Baumbach, Sebastian Felix A1 - Hörterer, Hubert A1 - Oppelt, Sonja A1 - Szeimies, Ulrike A1 - Polzer, Hans A1 - Walther, Markus T1 - Do pre-operative radiologic assessment predict postoperative outcomes in patients with insertional Achilles tendinopathy?: a retrospective database study JF - Archives of Orthopaedic and Trauma Surgery N2 - Introduction Diagnosis and treatment of insertional tendinopathy of the Achilles tendon (IAT) remains a challenge. The aim of this study was to assess the influence of pre-operative radiological pathologies on the patient-reported outcomes following open debridement of all pathologies for IAT. Materials and methods In this IRB-approved retrospective correlation and comparative study, patients with pre-operative imaging were identified from the authors’ retrospective IAT database comprising of 118 patients. All were treated by a standardized surgical treatment strategy utilizing a midline, transachillary approach and debridement of all pathologies. A total of fifteen radiologic parameters were measured on radiographs (RX) and MRI. The patient-reported outcomes were assessed using the Victorian Institute of Sport Assessment-Achilles questionnaire (VISA-A-G) and the general health questionnaire SF-12 at a minimum follow-up of 12 months. The data are presented as mean ± SD (95% CI). Results 88 patients (74.6%) with an average age of 50 ± 12 (47–52) years were included. Radiographs were available in 68 patients and MRI in 53. The mean follow-up was 3.8 ± 1.9 (3.4–4.3) years. The overall VISA-A-G was 81 ± 22 (77–86), the SF-12 PCS 54 ± 7 (52–55), and the SF-12 MCS 52 ± 9 (50–54) points. None of the assessed radiological parameters had a significant influence on the patient-reported outcome following surgical treatment for IAT. Conclusion In this retrospective correlation study, no significant association was found between preoperative radiographic and MRI radiologic parameters for IAT and postoperative patient-reported outcomes (VISA-A-G and SF-12). KW - Achilles KW - insertion KW - PROM KW - imaging KW - surgery Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-307963 SN - 1434-3916 VL - 142 IS - 11 ER - TY - JOUR A1 - Bazihizina, Nadia A1 - Böhm, Jennifer A1 - Messerer, Maxim A1 - Stigloher, Christian A1 - Müller, Heike M. A1 - Cuin, Tracey Ann A1 - Maierhofer, Tobias A1 - Cabot, Joan A1 - Mayer, Klaus F. X. A1 - Fella, Christian A1 - Huang, Shouguang A1 - Al‐Rasheid, Khaled A. S. A1 - Alquraishi, Saleh A1 - Breadmore, Michael A1 - Mancuso, Stefano A1 - Shabala, Sergey A1 - Ache, Peter A1 - Zhang, Heng A1 - Zhu, Jian‐Kang A1 - Hedrich, Rainer A1 - Scherzer, Sönke T1 - Stalk cell polar ion transport provide for bladder‐based salinity tolerance in Chenopodium quinoa JF - New Phytologist N2 - Chenopodium quinoa uses epidermal bladder cells (EBCs) to sequester excess salt. Each EBC complex consists of a leaf epidermal cell, a stalk cell, and the bladder. Under salt stress, sodium (Na\(^{+}\)), chloride (Cl\(^{−}\)), potassium (K\(^{+}\)) and various metabolites are shuttled from the leaf lamina to the bladders. Stalk cells operate as both a selectivity filter and a flux controller. In line with the nature of a transfer cell, advanced transmission electron tomography, electrophysiology, and fluorescent tracer flux studies revealed the stalk cell’s polar organization and bladder‐directed solute flow. RNA sequencing and cluster analysis revealed the gene expression profiles of the stalk cells. Among the stalk cell enriched genes, ion channels and carriers as well as sugar transporters were most pronounced. Based on their electrophysiological fingerprint and thermodynamic considerations, a model for stalk cell transcellular transport was derived. KW - halophyte KW - polar ion transport KW - quinoa KW - salt tolerance KW - stalk cell Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-287222 VL - 235 IS - 5 SP - 1822 EP - 1835 ER - TY - THES A1 - Becht, Alexander Ulrich T1 - New applications for spectroscopic and chemometric studies of drugs T1 - Neue Anwendungen für spektroskopische und chemometrische Untersuchungen von Arzneimitteln N2 - Spectroscopic methods were established decades ago in a wide variety of fields. This also applies to the pharmaceutical field, although they initially were mostly used for identity testing or structure elucidation only. Technical developments, such as miniaturization (NMR benchtop devices), Fourier transformations (for NMR, MIR spectroscopy) or the combination with chemometric evaluation (e.g., in Process Analytical Technology, PAT), have further increased their importance and opened up new applications. The aim of this work was to investigate further new approaches and to find new applications for already established methods and to show their benefits. By means of MIR, NIR and NMR data and their chemometric evaluation (principal component analysis, PCA; hierarchical cluster analysis, HCA; linear discriminant analysis, LDA), possibilities were presented to successfully determine the manufacturer or the pharmaceutical company of various paracetamol preparations. In the course of this, various similarities and correlations between the preparations of individual companies could also be identified. For this purpose, a suitable sample preparation was developed for each spectroscopic method, and suitable measurement parameters in order to obtain reproducible spectra for the chemometric evaluation were determined. Furthermore, the results of the two unsupervised methods (HCA, PCA) were compared with each other. The HCA was able to confirm those of the PCA for the very most part. Additionally, through these methods it was possible to characterize many of the preparations based on clusters formed by comparable tablet compositions. In order to be able to measure unmortared, whole tablets using the NIR spectrometer, an attachment was developed and manufactured using 3D printing. Its functionality was demonstrated by measuring and analyzing the tablets of two different batches of nine paracetamol preparations. The batches were clearly distinguished on the basis of a PCA and a significant difference was also demonstrated by means of statistical tests. For NMR spectroscopy, a method was developed to obtain optimized "fingerprint" spectra of drug formulations. For this purpose, a 1D DOSY measurement was elaborated, in which the signals of the active ingredient could be filtered out by the appropriate choice of measurement parameters. The chemometric evaluation can thus focus on the remaining signals of the excipients, on the basis of which the preparations of the same API can be distinguished. Especially in the case of formulations that consist largely of active ingredient, data pre processing of the spectra can thus be simplified and greater importance can be assigned to the originally very small excipient signals. A quantitative 1H NMR method was developed for the comparison of a high field spectrometer (400 MHz) with a benchtop spectrometer (80 MHz) for two finished drugs. It was shown that it is possible to obtain comparable results with both instruments, but that the influence of the excipients on the signals and the lower resolution of the benchtop instrument must be taken into account. Therefore, it was not possible to obtain comparable results without further optimization of the method for one of the active ingredients. In the investigation of various reactions between APIs and excipients using DOSY, its usefulness as a screening method in stability testing was demonstrated. For this purpose, three different APIs and excipients were stressed together and the reaction mixtures were subsequently measured using DOSY. Based on the translational diffusion coefficient, the reaction products could be identified and distinguished from the active ingredients and the excipients used. The importance of thoughtful processing could also be demonstrated. If all peak heights are selected when evaluating signals split by direct spin spin coupling, this allows the detection of hidden signals as long as not all signals have the same diffusion coefficient. The selective selection of individual peak heights in the case of split signals also enables the evaluation of signals that overlap slightly. However, the limitations of this method were also shown when two signals overlap too much and differ too little in their diffusion coefficients. Hence, it has been successfully demonstrated in the various projects that the new chemometric approaches, as well as the new applications of already established methods, enable in depth findings and thus have a clear added value. N2 - Spektroskopische Methoden haben sich schon vor Jahrzehnten in den verschiedensten Bereichen etabliert. Dies betrifft auch den pharmazeutischen Bereich, auch wenn sie hier zunächst meist nur zur Identitätsprüfung oder Strukturaufklärung verwendet wurden. Durch technische Weiterentwicklungen, wie Miniaturisierungen (NMR benchtop Geräte), Fourier Transformationen (NMR, MIR) oder die Kombination mit einer chemometrischen Auswertung (z. B. bei Process Analytical Technology, PAT), haben sie weiter an Bedeutung gewonnen, und es wurden neue Einsatzbereiche erschlossen. Das Ziel der vorliegenden Arbeit war es, weitere neue Ansätze zu untersuchen und neue Anwendungen für bereits etablierte Methoden zu finden und deren Mehrwert aufzuzeigen. Es wurden Möglichkeiten aufgezeigt mittels MIR , NIR und NMR Daten und deren chemometrischen Auswertungen (Hauptkomponentenanalyse, PCA; hierarchische Clusteranalyse, HCA; lineare Diskriminanzanalyse, LDA) erfolgreich den Hersteller bzw. das pharmazeutische Unternehmen verschiedener Paracetamol Präparate zu bestimmen. In diesem Zuge konnten Ähnlichkeiten zwischen Präparaten unterschiedlicher Firmen identifiziert werden. Um dies zu erreichen, wurde für jede spektroskopische Methode eine geeignete Probenvorbereitung entwickelt sowie geeignete Messparameter festgelegt, um reproduzierbare Spektren für die chemometrische Auswertung zu erhalten. Weiterhin wurden die Ergebnisse der zwei unüberwachten Methoden (HCA, PCA) miteinander verglichen, wobei die HCA die der PCA zum allergrößten Teil bestätigen konnte. Zudem war es möglich durch diese Methoden viele der Präparate anhand von Clustern zu charakterisieren, die durch vergleichbare Tablettenzusammensetzungen gebildet wurden. Um mit Hilfe des NIR Spektrometers intakte Tabletten vermessen zu können, wurde ein Aufsatz entwickelt und mittels 3D Druck hergestellt. Dessen Funktionalität wurde überprüft, indem Tabletten aus je zwei unterschiedlichen Chargen von neun Paracetamol Präparaten vermessen und analysiert wurden. Dabei konnten die Batches anhand einer PCA eindeutig unterschieden und zudem mittels statistischer Tests ein signifikanter Unterschied nachgewiesen werden. Für die NMR Spektroskopie wurde eine Methode entwickelt, um optimierte „Fingerprint“ Spektren von Arzneimittelformulierungen zu erhalten. Dazu wurde eine 1D DOSY Messmethode erarbeitet, bei der durch die passende Wahl der Messparameter die Signale des Wirkstoffes herausgefiltert werden konnten. Die chemometrische Auswertung konnte sich somit auf die Signale der Hilfsstoffe beschränken, anhand derer die Präparate unterschieden werden können. Vor allem bei Formulierungen, die zum größten Teil aus Wirkstoff bestehen, kann so eine Datenvorverarbeitung der Spektren vereinfacht und den ursprünglich sehr kleinen Hilfsstoffsignalen eine größere Bedeutung beigemessen werden. Für den Vergleich eines Hochfeld Spektrometers (400 MHz) mit einem „benchtop“ Spektrometer (80 MHz) wurde für zwei Fertigarzneimittel eine quantitative 1H NMR Methode entwickelt. Es konnte gezeigt werden, dass es möglich ist, mit beiden Geräten vergleichbare Ergebnisse zu erzielen. Dabei ist jedoch der Einfluss der Hilfsstoffe auf die Signale sowie die geringere Auflösung des „benchtop“ Gerätes zu berücksichtigen. Aus diesen Gründen war es ohne eine weitere Optimierung der Methode für einen der Wirkstoffe nicht möglich vergleichbare Ergebnisse mit beiden Geräten zu erzielen. Bei der Untersuchung verschiedener Reaktionen zwischen Wirk- und Hilfsstoffen mittels DOSY konnte dessen Nutzen als Screening Methode bei Stabilitätstests gezeigt werden. Für diesen Zweck wurden drei verschiedene Wirk- und Hilfsstoffe gemeinsam gestresst und die Reaktionsgemische anschließend mittels DOSY vermessen. Anhand des translationalen Diffusionskoeffizienten konnten die Reaktionsprodukte identifiziert und von den eingesetzten Wirk- und Hilfsstoffen unterschieden werden. Ebenso konnte die Bedeutung einer sorgfältigen Prozessierung demonstriert werden. Werden bei der Auswertung von Signalen, die durch direkte Spin Spin Kopplung aufgespalten wurden, alle Peakhöhen ausgewählt, erlaubt dies die Detektion von versteckten Signalen, falls nicht alle Signale den gleichen Diffusionskoeffizienten besitzen. Die selektive Auswahl einzelner Peakhöhen bei aufgespaltenen Signalen ermöglicht zudem die Auswertung von leicht überlappenden Signalen. Es wurden jedoch auch die Grenzen dieser Methode aufgezeigt: wenn zwei Signale zu stark überlappen und sich dabei in ihrem Diffusionskoeffizienten zu wenig unterscheiden. Somit konnte in den verschiedenen Projekten erfolgreich gezeigt werden, dass die neuen chemometrischen Ansätze, sowie die neuen Anwendungen bereits etablierter Methoden vertiefte Erkenntnisse ermöglichen und somit einen deutlichen Mehrwert besitzen. KW - Instrumentelle Analytik KW - NMR-Spektroskopie KW - MIR-Spektroskopie KW - NIR-Spektroskopie KW - Chemometrie KW - Paracetamol KW - Acetaminophen Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-275342 ER - TY - JOUR A1 - Beck, Franziska A1 - Engel, Florian A. A1 - Reimers, Anne Kerstin T1 - Compensation or displacement of physical activity in children and adolescents: a systematic review of empirical studies JF - Children N2 - Regular physical activity during childhood and adolescence is associated with health benefits. Consequently, numerous health promotion programs for children and adolescents emphasize the enhancement of physical activity. However, the ActivityStat hypothesis states that increases in physical activity in one domain are compensated for by decreasing physical activity in another domain. Currently, little is known about how physical activity varies in children and adolescents within intervals of one day or multiple days. This systematic review provides an overview of studies that analyzed changes in (overall) physical activity, which were assessed with objective measurements, or compensatory mechanisms caused by increases or decreases in physical activity in a specific domain in children and adolescents. A systematic search of electronic databases (PubMed, Scopus, Web of Science, SportDiscus) was performed with a priori defined inclusion criteria. Two independent researchers screened the literature and identified and rated the methodological quality of the studies. A total of 77 peer-reviewed articles were included that analyzed changes in overall physical activity with multiple methodological approaches resulting in compensation or displacement. Of 40,829 participants, 16,265 indicated compensation associated with physical activity. Subgroup analyses separated by study design, participants, measurement instrument, physical activity context, and intervention duration also showed mixed results toward an indication of compensation. Quality assessment of the included studies revealed that they were of high quality (mean = 0.866). This review provides inconclusive results about compensation in relation to physical activity. A trend toward increased compensation in interventional studies and in interventions of longer duration have been observed. KW - compensation KW - displacement KW - physical activity KW - children KW - adolescents Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-267231 SN - 2227-9067 VL - 9 IS - 3 ER - TY - JOUR A1 - Beer, Katharina A1 - Härtel, Stephan A1 - Helfrich-Förster, Charlotte T1 - The pigment-dispersing factor neuronal network systematically grows in developing honey bees JF - The Journal of Comparative Neurology N2 - The neuropeptide pigment-dispersing factor (PDF) plays a prominent role in the circadian clock of many insects including honey bees. In the honey bee brain, PDF is expressed in about 15 clock neurons per hemisphere that lie between the central brain and the optic lobes. As in other insects, the bee PDF neurons form wide arborizations in the brain, but certain differences are evident. For example, they arborize only sparsely in the accessory medulla (AME), which serves as important communication center of the circadian clock in cockroaches and flies. Furthermore, all bee PDF neurons cluster together, which makes it impossible to distinguish individual projections. Here, we investigated the developing bee PDF network and found that the first three PDF neurons arise in the third larval instar and form a dense network of varicose fibers at the base of the developing medulla that strongly resembles the AME of hemimetabolous insects. In addition, they send faint fibers toward the lateral superior protocerebrum. In last larval instar, PDF cells with larger somata appear and send fibers toward the distal medulla and the medial protocerebrum. In the dorsal part of the medulla serpentine layer, a small PDF knot evolves from which PDF fibers extend ventrally. This knot disappears during metamorphosis and the varicose arborizations in the putative AME become fainter. Instead, a new strongly stained PDF fiber hub appears in front of the lobula. Simultaneously, the number of PDF neurons increases and the PDF neuronal network in the brain gets continuously more complex. KW - apis mellifera KW - circadian clock KW - immunohistochemistry KW - larval and pupal development KW - neuroanatomy Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-257300 VL - 530 IS - 9 ER - TY - JOUR A1 - Beetz, M. Jerome A1 - Hechavarría, Julio C. T1 - Neural processing of naturalistic echolocation signals in bats JF - Frontiers in Neural Circuits N2 - Echolocation behavior, a navigation strategy based on acoustic signals, allows scientists to explore neural processing of behaviorally relevant stimuli. For the purpose of orientation, bats broadcast echolocation calls and extract spatial information from the echoes. Because bats control call emission and thus the availability of spatial information, the behavioral relevance of these signals is undiscussable. While most neurophysiological studies, conducted in the past, used synthesized acoustic stimuli that mimic portions of the echolocation signals, recent progress has been made to understand how naturalistic echolocation signals are encoded in the bat brain. Here, we review how does stimulus history affect neural processing, how spatial information from multiple objects and how echolocation signals embedded in a naturalistic, noisy environment are processed in the bat brain. We end our review by discussing the huge potential that state-of-the-art recording techniques provide to gain a more complete picture on the neuroethology of echolocation behavior. KW - biosonar KW - neural coding KW - naturalistic stimuli KW - bats KW - acoustic stream KW - neuroethology Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-274605 SN - 1662-5110 VL - 16 ER - TY - JOUR A1 - Behera, Ananyaashree A1 - Jain, Preeti A1 - Ganguli, Geetanjali A1 - Biswas, Mainak A1 - Padhi, Avinash A1 - Pattanaik, Kali Prasad A1 - Nayak, Barsa A1 - Ergün, Süleyman A1 - Hagens, Kristine A1 - Redinger, Natalja A1 - Saqib, Mohd A1 - Mishra, Bibhuti B. A1 - Schaible, Ulrich E. A1 - Karnati, Srikanth A1 - Sonawane, Avinash T1 - Mycobacterium tuberculosis acetyltransferase suppresses oxidative stress by inducing peroxisome formation in macrophages JF - International Journal of Molecular Sciences N2 - Mycobacterium tuberculosis (Mtb) inhibits host oxidative stress responses facilitating its survival in macrophages; however, the underlying molecular mechanisms are poorly understood. Here, we identified a Mtb acetyltransferase (Rv3034c) as a novel counter actor of macrophage oxidative stress responses by inducing peroxisome formation. An inducible Rv3034c deletion mutant of Mtb failed to induce peroxisome biogenesis, expression of the peroxisomal β-oxidation pathway intermediates (ACOX1, ACAA1, MFP2) in macrophages, resulting in reduced intracellular survival compared to the parental strain. This reduced virulence phenotype was rescued by repletion of Rv3034c. Peroxisome induction depended on the interaction between Rv3034c and the macrophage mannose receptor (MR). Interaction between Rv3034c and MR induced expression of the peroxisomal biogenesis proteins PEX5p, PEX13p, PEX14p, PEX11β, PEX19p, the peroxisomal membrane lipid transporter ABCD3, and catalase. Expression of PEX14p and ABCD3 was also enhanced in lungs from Mtb aerosol-infected mice. This is the first report that peroxisome-mediated control of ROS balance is essential for innate immune responses to Mtb but can be counteracted by the mycobacterial acetyltransferase Rv3034c. Thus, peroxisomes represent interesting targets for host-directed therapeutics to tuberculosis. KW - peroxisome KW - Rv3034c KW - acetyltransferase KW - macrophages KW - oxidative stress KW - Mycobacterium tuberculosis Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-284080 SN - 1422-0067 VL - 23 IS - 5 ER -