TY - THES A1 - Streinzer, Martin T1 - Sexual dimorphism of the sensory systems in bees (Hymenoptera, Apoidea) and the evolution of sex-specific adaptations in the context of mating behavior T1 - Sensorischer Geschlechtsdimorphismus bei Bienen (Hymenoptera, Apoidea) und die Evolution geschlechtsspezifischer Anpassungen im Kontext des Paarungsverhaltens N2 - Bees have had an intimate relationship with humans for millennia, as pollinators of fruit, vegetable and other crops and suppliers of honey, wax and other products. This relationship has led to an extensive understanding of their ecology and behavior. One of the most comprehensively understood species is the Western honeybee, Apis mellifera. Our understanding of sex-specific investment in other bees, however, has remained superficial. Signals and cues employed in bee foraging and mating behavior are reasonably well understood in only a handful of species and functional adaptations are described in some species. I explored the variety of sensory adaptations in three model systems within the bees. Females share a similar ecology and similar functional morphologies are to be expected. Males, engage mainly in mating behavior. A variety of male mating strategies has been described which differ in their spatiotemporal features and in the signals and cues involved, and thus selection pressures. As a consequence, males’ sensory systems are more diverse than those of females. In the first part I studied adaptations of the visual system in honeybees. I compared sex and caste-specific eye morphology among 5 species (Apis andreniformis, A. cerana, A. dorsata, A. florea, A. mellifera). I found a strong correlation between body size and eye size in both female castes. Queens have a relatively reduced visual system which is in line with the reduced role of visual perception in their life history. Workers differed in eye size and functional morphology, which corresponds to known foraging differences among species. In males, the eyes are conspicuously enlarged in all species, but a disproportionate enlargement was found in two species (A. dorsata, A. florea). I further demonstrate a correlation between male visual parameters and mating flight time, and propose that light intensities play an important role in the species-specific timing of mating flights. In the second study I investigated eye morphology differences among two phenotypes of drones in the Western honeybee. Besides normal-sized drones, smaller drones are reared in the colony, and suffer from reduced reproductive success. My results suggest that the smaller phenotype does not differ in spatial resolution of its visual system, but suffers from reduced light and contrast sensitivity which may exacerbate the reduction in reproductive success caused by other factors. In the third study I investigated the morphology of the visual system in bumblebees. I explored the association between male eye size and mating behavior and investigated the diversity of compound eye morphology among workers, queens and males in 11 species. I identified adaptations of workers that correlate with distinct foraging differences among species. Bumblebee queens must, in contrast to honeybees, fulfill similar tasks as workers in the first part of their life, and correspondingly visual parameters are similar among both female castes. Enlarged male eyes are found in several subgenera and have evolved several times independently within the genus, which I demonstrate using phylogenetic informed statistics. Males of these species engage in visually guided mating behavior. I find similarities in the functional eye morphology among large-eyed males in four subgenera, suggesting convergent evolution as adaptation to similar visual tasks. In the remaining species, males do not differ significantly from workers in their eye morphology. In the fourth study I investigated the sexual dimorphism of the visual system in a solitary bee species. Males of Eucera berlandi patrol nesting sites and compete for first access to virgin females. Males have enlarged eyes and better spatial resolution in their frontal eye region. In a behavioral study, I tested the effect of target size and speed on male mate catching success. 3-D reconstructions of the chasing flights revealed that angular target size is an important parameter in male chasing behavior. I discuss similarities to other insects that face similar problems in visual target detection. In the fifth study I examined the olfactory system of E. berlandi. Males have extremely long antennae. To investigate the anatomical grounds of this elongation I studied antennal morphology in detail in the periphery and follow the sexual dimorphism into the brain. Functional adaptations were found in males (e.g. longer antennae, a multiplication of olfactory sensilla and receptor neurons, hypertrophied macroglomeruli, a numerical reduction of glomeruli in males and sexually dimorphic investment in higher order processing regions in the brain), which were similar to those observed in honeybee drones. The similarities and differences are discussed in the context of solitary vs. eusocial lifestyle and the corresponding consequences for selection acting on males. N2 - Bienen und Menschen verbindet eine lange andauernde und enge Beziehung. Diese enge Beziehung hat zu einem ausgeprägten Wissen über die Ökologie und das Verhalten geführt. Die am besten untersuchte Bienenart ist die westliche Honigbiene, Apis mellifera. Der ausgeprägte Kasten- und Sexualdimorphismus hat das Studium der Geschlechterunterschiede vereinfacht und vorangetrieben. Unser Wissen über geschlechtsspezifische Investitionen bei Bienen ist jedoch in vielerlei Hinsicht lückenhaft geblieben. Die Signale und Achtungssignale die im Paarungsverhalten eine Rolle spielen sind nur bei einer Handvoll Arten hinreichend bekannt und funktionelle Anpassungen an diese sind in wenigen Arten beschrieben. In dieser Arbeit habe ich sensorische Anpassungen an geschlechtsspezifische Verhaltensweisen in drei Bienengruppen genauer untersucht. Weibchen und Arbeiterinnen haben generell eine ähnliche Lebensweise. Männchen beschäftigen sich fast ausschließlich mit der Partnersuche. Infolgedessen, zeigt die Sensorik der Männchen eine größere Vielfalt an morphologischen und funktionellen Anpassungen als die der Weibchen. Im ersten Abschnitt dieser Arbeit habe ich Anpassungen des visuellen Systems von 5 Honigbienenarten (Apis andreniformis, A. cerana, A. dorsata, A. florea, A. mellifera) untersucht. Ich finde eine deutliche Korrelation zwischen Körper- und Augengröße bei beiden weiblichen Kasten. Königinnen haben relativ kleinere Augen als Arbeiterinnen, was der verringerten Rolle visueller Wahrnehmung im Lebenszyklus dieser Kaste entspricht. Die Arbeiterinnen unterschieden sich sowohl in ihrer Augengröße als auch in der funktionellen Morphologie. Die Unterschiede passen jeweils zu der artspezifischen Ökologie. Drohnen aller Arten haben auffällig vergrößerte Augen, jedoch sind sie in zwei Arten (A. dorsata, A. florea) überproportional vergrößert. Zusätzlich zeige ich, dass bestimmte Augenparameter mit dem artspezifischen Paarungszeitpunkt korrelieren, und schlage vor, dass die Lichtintensität eine Rolle bei der Feststellung des richtigen Paarungszeitpunktes spielen könnte. In der zweiten Untersuchung habe ich die Augen von zwei Drohnenphänotypen von A. mellifera untersucht. Neben normalen Drohen werden in der Kolonie auch kleinere Drohnen aufgezogen, die unter einem geringeren Fortpflanzungserfolg leiden. Meine Ergebnisse zeigen, dass sich die Phänotypen vermutlich nicht in der räumlichen Auflösungsfähigkeit, jedoch in der Lichtempfindlichkeit der Augen von normalen Drohnen unterscheiden. In der dritten Untersuchung habe ich die Augenmorphologie bei 11 Hummelarten untersucht. Ich beschreibe in dieser Studie Anpassungen der Arbeiterinnen, die vermutlich mit der Habitatwahl im Zusammenhang stehen. Hummelköniginnen sind, im Gegensatz zu Königinnen der Honigbiene, in der ersten Zeit nach der Koloniegründung auf sich allein gestellt und müssen alle Aufgaben, die später von den Arbeiterinnen übernommen werden, selbst ausführen. Dementsprechend sind die Augen beider Weibchenkasten ähnlich in ihrer relativen Größe und funktionellen Morphologie. Vergrößerte Augen der Männchen können in Arten verschiedener Untergattungen gefunden werden und der Phänotyp ist im Laufe der Evolution mehrfach unabhängig entstanden, was ich mit phylogenetisch vergleichenden Methoden zeige. Die Augenmorphologie der vier untersuchten großäugigen Arten ist sehr ähnlich, was auf konvergente Evolution hinweist. Die Augenmorphologie der restlichen Arten unterscheidet sich hingegen nicht deutlich von jener der Weibchen. In der vierten Untersuchung habe ich mich dem Sexualdimorphismus der Solitärbienenart Eucera berlandi gewidmet. Männchen haben größere Augen und sowohl größere Facetten als auch eine höhere räumliche Auflösung im frontalen Gesichtsfeld als Weibchen. In einem Verhaltensversuch habe ich die Auswirkungen der Größe von Weibchendummies auf die Detektion getestet. In 3-D Rekonstruktionen der Weibchenverfolgung zeigte sich dass die Winkelgröße des Objektes, eine von der Distanz unabhängige Größe, eine wichtige Rolle spielt. Im Zusammenhang mit den gefundenen Daten diskutiere ich die Parallelen zu anderen Insektenarten. In der fünften Studie untersuche ich das olfaktorische System von E. berlandi. Männchen haben extreme lange Antennen. Um die anatomischen Grundlagen der geschlechtsspezifischen Antennenmorphologie zu untersuchen habe ich die Antennen beider Geschlechter im Detail studiert. Zusätzlich bin ich dem Dimorphismus entlang der olfaktorischen Bahn bis ins Gehirn gefolgt. Männchen zeige funktionelle Anpassungen (z.B. längere Antennen, eine höhere Anzahl an olfaktorischen Sensillen und Rezeptorneuronen, stark vergrößerte Glomeruli im Antennallobus, eine zahlenmäßige Reduktion der Glomeruli und geschlecherspezifische Investition in höhere Integrationszentren im Gehirn) an die Weibchendetektion. KW - Biene KW - Sinne KW - Verhalten KW - Neurobiologie KW - Geschlechtsunterschied KW - Biene KW - Hummel KW - Sinnesphysiologie KW - Evolution KW - bees KW - sensory ecology KW - evolution KW - visual system Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-78689 ER - TY - THES A1 - Steckel, Juliane T1 - Effects of landscape heterogeneity and land use on interacting groups of solitary bees, wasps and their flying and ground-dwelling antagonists T1 - Effekte von Landschaftsheterogenität und Landnutzung auf interagierende Gruppen solitärer Bienen, Wespen und ihrer fliegenden und bodenlebenden Gegenspieler N2 - Die Heterogenität unserer heutigen Landschaften und Habitate ist geprägt und von jahrzehntelanger Landnutzungsintensivierung. Die daraus hervorgegangene Verarmung von weiträumigen Arealen führte zu einer zeitlich und räumlich stark eingeschränkten Verfügbarkeit von Nistmöglichkeiten und Nahrungsressourcen für Wildbienen und Wespen. Die Folgen sich verändernder Ressourcenverfügbarkeit für Wildbienen und Wespen war und ist eine Gefährdung der Artenvielfalt und der Ökosystemprozesse, die diese Arten in Gang halten. Konsequenzen für diese wichtigen Bestäuber und Prädatoren sind kaum erforscht, genauso wenig wie für ihre Gegenspieler als natürliche Top-Down-Regulatoren. Nisthilfen für Wildbienen, Wespen und ihre natürlichen Gegenspieler eignen sich hervorragend um diese Wissenslücken zu füllen, da sie wertvolle Einblicke gewähren in ansonsten verborgene trophische Interaktionen, wie Parasitierung und Prädation, aber auch in Ökosystemprozesse wie Bestäubung und Reproduktion. Somit stellten wir uns in Kapitel II zunächst die Frage, wie die Abundanz von stängelnistenden Bienen und Wespen im Grünland von dessen Bewirtschaftung abhängt. Außerdem untersuchten wir, wie Landnutzung die Effektivität der Top-Down-Regulation von Wildbienen und Wespen durch zwei verschiedene Gruppen von Gegenspielern beeinflusst. Dazu haben wir einer der beiden Gruppen, den bodenlebenden Gegenspielern, den Zugang zu den Nisthilfen vorenthalten. In einer großangelegten Feldstudie, die sich über drei verschiedene Regionen Deutschlands erstreckte, installierten wir 760 Nisthilfen auf 95 Grünlandflächen. Der Versuchsplan beinhaltete gemähte und nicht gemähte Versuchsplots, sowie Plots mit und ohne Ausschluss von Bodenprädatoren. Wildbienen und Wespen besiedelten die Nisthilfen unabhängig davon, ob Bodenprädatoren nun Zugang zu den Nisthilfen hatten oder nicht. Allerdings erhöhte sich die Rate der von fliegenden Gegenspielern gefressenen und parasitierten Brutzellen (Fressrate) sobald bodenlebende Gegenspieler ausgeschlossen wurden. Diese Fressrate war vom experimentellen Mähen unabhängig. Jedoch wiesen ungemähte Versuchsplots marginal signifikant mehr Brutzellen von Wespen auf. Beide Manipulationen, das Mähen und der Prädatorausschluss, interagierten signifikant. So wurden auf gemähten Plots, auf denen Bodenprädatoren ausgeschlossen waren, höhere Fressraten der fliegenden Gegenspieler beobachtet, während dieser Effekt auf der ungemähten Plots ausblieb. Das Thema in Kapitel III ist der relative Einfluss lokaler Grünlandnutzung, Landschaftsdiversität und Landschaftsstruktur auf Artenvielfalt und –abundanz von Wildbienen, Wespen und ihrer fliegenden Gegenspieler. Dazu kartierten wir Landnutzungstypen innerhalb konzentrischer Kreise um die Versuchsplots. Mithilfe der digitalisierten Landschaftsdaten berechneten wir Indices als Maße für Landschaftsdiversität und –struktur für acht Radien bis 2000 m. Der negative Effekt lokaler Landnutzung auf die Wirtsabundanz war nur marginal signifikant. Jedoch stellten wir einen positiven Effekt der Landschaftsdiversität innerhalb kleiner Radien auf die Artenvielfalt und –abundanz der Wirte fest. Die fliegenden Gegenspieler allerdings profitierten von einer komplexen Landschaftsstruktur innerhalb großer Radien. Die letzte Studie, vorgestellt in Kapitel IV, behandelt die Bedeutung von Ressourcenverfügbarkeit für die Dauer von Fouragierflügen und die sich daraus ergebenen Konsequenzen für den Reproduktionserfolg der Roten Mauerbiene. Dazu beobachteten wir nistenden Bienen auf 18 Grünlandflächen in zwei der Untersuchungsregionen in Deuschland. Wir ermittelten die lokale Landnutzungsintensität, lokale Blütendeckung sowie Landschaftsdiversität und –struktur als wichtige potentielle Einflussfaktoren. Jede Grünlandfläche wurde mit acht Nisthilfen und 50 weiblichen Bienen ausgestattet. Verschiedene Nestbau-Aktivitäten, wie Fouragierflüge für Pollen und Nektar, wurden aufgenommen. Wir stellten fest, dass Fouragierflüge für Pollen und Nektar in komplexen, strukturreichen Landschaften signifikant kürzer waren, dass jedoch weder lokale Faktoren, noch Landschaftsdiversität eine Rolle spielten. Wir konnten keinen Zusammenhang zwischen der Dauer von Fouragierflügen und Reproduktionserfolg feststellen. Um eine räumlich und zeitlich konstante Versorgung von Nahrungs- und Nistressourcen zu gewährleisten und damit biotische Interaktionen, Diversität und Besiedlungserfolg von Wildbienen, Wespen und ihrer Gegenspieler zu unterstützen, empfehlen wir Maßnahmen, die sowohl die lokale Landnutzung als auch unterschiedliche Landschaftsfaktoren berücksichtigen. N2 - Within the last decades, land use intensification reduced the heterogeneity of habitats and landscapes. The resulting pauperization led to habitats and landscapes that are spatially or temporally limited in food and nesting resources for solitary bees and wasps. Hence, biodiversity and ecosystem processes are seriously threatened. The impacts of changing resource conditions for valuable pollinators and (pest) predators remain poorly studied as well as their top-down regulation by natural enemies. Further, the reproductive success of solitary bees as response to changed resource distribution within foraging ranges is rarely examined. We considered trap-nesting bees, wasps and their antagonists as suitable model organisms to fill these gaps of knowledge, since trap nests provide insight into otherwise hidden trophic interactions, like parasitism and predation, as well as ecological processes, like pollination and reproduction. Moreover, trap-nesting species are established as essential biodiversity indicator taxa. Thus, we first asked in Chapter II how the reproduction of cavity-nesting bees and wasps in grasslands depends on local management Moreover, we tested land use effects on the effectiveness of two groups of antagonists in regulating bee and wasp populations by excluding ground-dwelling antagonists. We characterized nest closure type to determine their protective function against antagonist attacks. In a highly replicated, large-scaled study, we provided 95 grassland sites in three geographic regions in Germany with 760 trap-nests. The full factorial design comprised mown and unmown plots as well as plots with and without access of ground-dwelling predators to the trap nests. The colonization of bees and wasps was unaffected by ground-dwelling antagonists. However, excluding ground-dwellers enhanced the attack rate of flying antagonists. Experimental mowing marginally affected the colonization of wasps but not attack rates. Nevertheless, both treatments – mowing and predator exclusion – significantly interacted. The exclusion of ground-dwellers on mown plots resulted in higher attack rates of flying antagonists, whereas on unmown plots this effect of ground-dweller-exclusion on the attack rate of flying antagonists was not visible. Further, attack rates were determined by nest closure material, local abundance of different nest closure types as well as closure-associated antagonist species. In Chapter III, we studied the relative impact of local land use intensity, landscape composition and configuration on the species richness and abundance of bees, wasps and their antagonists. We analysed abundances and species numbers of hosts and their antagonists as well as parasitism rate and conducted a comprehensive landscape mapping. The digitized landscape data were the basis for further calculations of landscape metrics, like landscape composition and configuration within eight spatial scales ranging from 250 to 2,000 m radii. We used a compound, additive index of local land use intensity. Host abundance was only marginally negatively affected by local land use intensity. However, landscape composition at small spatial scales enhanced the species richness and abundance of hosts, while species richness and abundance of antagonists was positively related to landscape configuration at larger spatial scales. In the last study, presented in Chapter IV, we observed nesting bees on a selection of 18 grassland sites in two of the three research regions. We estimated the importance of resource distribution for pollen-nectar trips and consequences for the reproductive success of the solitary Red Mason Bee (Osmia bicornis). Local land use intensity, local flower cover as well as landscape composition and configuration were considered as critical factors of influence. We equipped each grassland site with eight trap nests and 50 female bees. Different nest building activities, like foraging trips for pollen and nectar, were measured. After the nesting season, we calculated measures of reproductive success. Foraging trips for pollen and nectar were significantly shorter in spatially complex landscapes but were neither affected by local metrics nor landscape composition. We found no evidence that the duration of pollen-nectar trips determines the reproductive success. Thus, to maintain trophic interactions and biodiversity, local land use as well as landscape diversity and spatial complexity should be accounted for to create spatial and temporal stability of food and nesting resources within small spatial scales. Concrete steps to support pollinator populations include hedges, sown field margins or other linear elements. These measures that enhance the connectivity of landscapes can also support flying antagonists. KW - Wildbienen KW - Landnutzung KW - Prädation KW - Parasitismus KW - Nisthilfe KW - Wespen KW - Trophische Interaktionen KW - Landschaftskonfiguration KW - Landschaftskomposition KW - Pollensammelzeiten KW - Reproduktionserfolg KW - Trophic interactions KW - Landscape configuration KW - Landscape composition KW - foraging trip durations KW - reproduction success Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-87900 ER - TY - JOUR A1 - Sporbert, Anje A1 - Cseresnyes, Zoltan A1 - Heidbreder, Meike A1 - Domaing, Petra A1 - Hauser, Stefan A1 - Kaltschmidt, Barbara A1 - Kaltschmidt, Christian A1 - Heilemann, Mike A1 - Widera, Darius T1 - Simple Method for Sub-Diffraction Resolution Imaging of Cellular Structures on Standard Confocal Microscopes by Three-Photon Absorption of Quantum Dots JF - PLoS ONE N2 - This study describes a simple technique that improves a recently developed 3D sub-diffraction imaging method based on three-photon absorption of commercially available quantum dots. The method combines imaging of biological samples via tri-exciton generation in quantum dots with deconvolution and spectral multiplexing, resulting in a novel approach for multi-color imaging of even thick biological samples at a 1.4 to 1.9-fold better spatial resolution. This approach is realized on a conventional confocal microscope equipped with standard continuous-wave lasers. We demonstrate the potential of multi-color tri-exciton imaging of quantum dots combined with deconvolution on viral vesicles in lentivirally transduced cells as well as intermediate filaments in three-dimensional clusters of mouse-derived neural stem cells (neurospheres) and dense microtubuli arrays in myotubes formed by stacks of differentiated C2C12 myoblasts. KW - HIV KW - stem-cell KW - infection Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-130963 VL - 8 IS - 5 ER - TY - JOUR A1 - Shannon, Graver A1 - Hein, Melanie T1 - Tumor cell response to bevacizumab single agent therapy in vitro JF - Cancer Cell International N2 - Background Angiogenesis represents a highly multi-factorial and multi-cellular complex (patho-) physiologic event involving endothelial cells, tumor cells in malignant conditions, as well as bone marrow derived cells and stromal cells. One main driver is vascular endothelial growth factor (VEGFA), which is known to interact with endothelial cells as a survival and mitogenic signal. The role of VEGFA on tumor cells and /or tumor stromal cell interaction is less clear. Condition specific (e.g. hypoxia) or tumor specific expression of VEGFA, VEGF receptors and co-receptors on tumor cells has been reported, in addition to the expression on the endothelium. This suggests a potential paracrine/autocrine loop that could affect changes specific to tumor cells. Methods We used the monoclonal antibody against VEGFA, bevacizumab, in various in vitro experiments using cell lines derived from different tumor entities (non small cell lung cancer (NSCLC), colorectal cancer (CRC), breast cancer (BC) and renal cell carcinoma (RCC)) in order to determine if potential VEGFA signaling could be blocked in tumor cells. The experiments were done under hypoxia, a major inducer of VEGFA and angiogenesis, in an attempt to mimic the physiological tumor condition. Known VEGFA induced endothelial biological responses such as proliferation, migration, survival and gene expression changes were evaluated. Results Our study was able to demonstrate expression of VEGF receptors on tumor cells as well as hypoxia regulated angiogenic gene expression. In addition, there was a cell line specific effect in tumor cells by VEGFA blockade with bevacizumab in terms of proliferation; however overall, there was a limited measurable consequence of bevacizumab therapy detected by migration and survival. Conclusion The present study showed in a variety of in vitro experiments with several tumor cell lines from different tumor origins, that by blocking VEGFA with bevacizumab, there was a limited autocrine or cell-autonomous function of VEGFA signaling in tumor cells, when evaluating VEGFA induced downstream outputs known in endothelial cells. KW - Bevacizumab KW - NCI-60 KW - Tumor angiogenesis KW - VEGFA KW - Hypoxia KW - In vitro Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-97185 UR - http://www.cancerci.com/content/13/1/94 ER - TY - JOUR A1 - Schulze, Katja A1 - Tillich, Ulrich M. A1 - Dandekar, Thomas A1 - Frohme, Marcus T1 - PlanktoVision – an automated analysis system for the identification of phytoplankton JF - BMC Bioinformatics N2 - Background Phytoplankton communities are often used as a marker for the determination of fresh water quality. The routine analysis, however, is very time consuming and expensive as it is carried out manually by trained personnel. The goal of this work is to develop a system for an automated analysis. Results A novel open source system for the automated recognition of phytoplankton by the use of microscopy and image analysis was developed. It integrates the segmentation of the organisms from the background, the calculation of a large range of features, and a neural network for the classification of imaged organisms into different groups of plankton taxa. The analysis of samples containing 10 different taxa showed an average recognition rate of 94.7% and an average error rate of 5.5%. The presented system has a flexible framework which easily allows expanding it to include additional taxa in the future. Conclusions The implemented automated microscopy and the new open source image analysis system - PlanktoVision - showed classification results that were comparable or better than existing systems and the exclusion of non-plankton particles could be greatly improved. The software package is published as free software and is available to anyone to help make the analysis of water quality more reproducible and cost effective. KW - Bioinformatik Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-96395 UR - http://www.biomedcentral.com/1471-2105/14/115 ER - TY - JOUR A1 - Schultz, Jörg A1 - Terhoeven, Niklas T1 - The bilaterian roots of cordon-bleu JF - BMC Research Notes N2 - Background The actin cytoskeleton is essential for many physiological processes of eukaryotic cells. The emergence of new actin fibers is initiated by actin nucleators. Whereas most of them are evolutionary old, the cordon-bleu actin nucleator is classified as vertebrate specific. Findings Using sensitive methods for sequence similarity detection, we identified homologs of cordon-bleu not only in non-vertebrate chordates but also in arthropods, molluscs, annelids and platyhelminthes. These genes contain only a single WH2 domain and therefore resemble more the vertebrate cordon-bleu related 1 protein than the three WH2 domain containing cordon-bleu. Furthermore, we identified a homolog of the N-terminal, ubiquitin like, cobl domain of cordon-bleu in the cnidarian Nematostella vectensis. Conclusion Our results suggest that the ur-form of the cordon-bleu protein family evolved already with the emergence of the bilateria by the combination of existing cobl and WH2 domains. Following a vertebrate specific gene-duplication, one copy gained two additional WH2 domains leading to the actin nucleating cordon-bleu. The function of the ur-form of the cordon-bleu protein family is so far unknown. The identification of a homolog in the model organism Drosophila melanogaster could facilitate its experimental characterization. KW - Actin nucleation KW - WH2 domain KW - Cobl domain KW - Gene duplication Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-97161 UR - http://www.biomedcentral.com/1756-0500/6/393 ER - TY - JOUR A1 - Schultz, Jörg A1 - Keller, Daniela Barbara T1 - Connectivity, Not Frequency, Determines the Fate of a Morpheme JF - PLoS ONE N2 - Morphemes are the smallest meaningful parts of words and therefore represent a natural unit to study the evolution of words. To analyze the influence of language change on morphemes, we performed a large scale analysis of German and English vocabulary covering the last 200 years. Using a network approach from bioinformatics, we examined the historical dynamics of morphemes, the fixation of new morphemes and the emergence of words containing existing morphemes. We found that these processes are driven mainly by the number of different direct neighbors of a morpheme in words (connectivity, an equivalent to family size or type frequency) and not its frequency of usage (equivalent to token frequency). This contrasts words, whose survival is determined by their frequency of usage. We therefore identified features of morphemes which are not dictated by the statistical properties of words. As morphemes are also relevant for the mental representation of words, this result might enable establishing a link between an individual’s perception of language and historical language change. KW - confidence intervals KW - evolutionary biology KW - culture KW - language KW - lexicography KW - linguistic morphology KW - network analysis KW - psycholinguistics Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-97039 ER - TY - JOUR A1 - Schul, Daniela A1 - Schmitt, Alexandra A1 - Regneri, Janine A1 - Schartl, Manfred A1 - Wagner, Toni Ulrich T1 - Bursted BMP Triggered Receptor Kinase Activity Drives Smad1 Mediated Long-Term Target Gene Oscillation in c2c12 Cells JF - PLoS ONE N2 - Bone Morphogenetic Proteins (BMPs) are important growth factors that regulate many cellular processes. During embryogenesis they act as morphogens and play a critical role during organ development. They influence cell fates via concentration-gradients in the embryos where cells transduce this extracellular information into gene expression profiles and cell fate decisions. How receiving cells decode and quantify BMP2/4 signals is hardly understood. There is little data on the quantitative relationships between signal input, transducing molecules, their states and location, and ultimately their ability to integrate graded systemic inputs and generate qualitative responses. Understanding this signaling network on a quantitative level should be considered a prerequisite for efficient pathway modulation, as the BMP pathway is a prime target for therapeutic invention. Hence, we quantified the spatial distribution of the main signal transducer of the BMP2/4 pathway in response to different types and levels of stimuli in c2c12 cells. We found that the subcellular localization of Smad1 is independent of ligand concentration. In contrast, Smad1 phosphorylation levels relate proportionally to BMP2 ligand concentrations and they are entirely located in the nucleus. Interestingly, we found that BMP2 stimulates target gene expression in non-linear, wave-like forms. Amplitudes showed a clear concentration-dependency, for sustained and transient stimulation. We found that even burst-stimulation triggers gene-expression wave-like modulations that are detectable for at least 30 h. Finally, we show here that target gene expression oscillations depend on receptor kinase activity, as the kinase drives further expression pulses without receptor reactivation and the target gene expression breaks off after inhibitor treatment in c2c12 cells. KW - gene expression KW - BMP signaling KW - SMAD signaling KW - genetic oscillators KW - cell fusion KW - DNA-binding proteins KW - luciferase KW - kinase inhibitors Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-130131 VL - 8 IS - 4 ER - TY - THES A1 - Schul, Daniela T1 - Spatio-temporal investigation and quantitative analysis of the BMP signaling pathway T1 - Raum-Zeitliche Untersuchung und quantitative Analyse des BMP-Signaltransduktionsweges N2 - Bone Morphogenetic Proteins (BMPs) are key regulators for a lot of diverse cellular processes. During embryonic development these proteins act as morphogens and play a crucial role particularly in organogenesis. BMPs have a direct impact on distinct cellular fates by means of concentration-gradients in the developing embryos. Using the diverse signaling input information within the embryo due to the gradient, the cells transduce the varying extracellular information into distinct gene expression profiles and cell fate decisions. Furthermore, BMP proteins bear important functions in adult organisms like tissue homeostasis or regeneration. In contrast to TGF-ß signaling, currently only little is known about how cells decode and quantify incoming BMP signals. There is poor knowledge about the quantitative relationships between signal input, transducing molecules, their states and location, and finally their ability to incorporate graded systemic inputs and produce qualitative responses. A key requirement for efficient pathway modulation is the complete comprehension of this signaling network on a quantitative level as the BMP signaling pathway, just like many other signaling pathways, is a major target for medicative interference. I therefore at first studied the subcellular distribution of Smad1, which is the main signal transducing protein of the BMP signaling pathway, in a quantitative manner and in response to various types and levels of stimuli in murine c2c12 cells. Results indicate that the subcellular localization of Smad1 is not dependent on the initial BMP input. Surprisingly, only the phospho-Smad1 level is proportionally associated to ligand concentration. Furthermore, the activated transducer proteins were entirely located in the nucleus. Besides the subcellular localization of Smad1, I have analyzed the gene expression profile induced by BMP signaling. Therefore, I examined two endogenous immediate early BMP targets as well as the expression of the stably transgenic Gaussia Luciferase. Interestingly, the results of these independent experimental setups and read-outs suggest oscillating target gene expression. The amplitudes of the oscillations showed a precise concentration-dependence for continuous and transient stimulation. Additionally, even short-time stimulation of 15’ activates oscillating gene-expression pulses that are detectable for at least 30h post-stimulation. Only treatment with a BMP type I receptor kinase inhibitor leads to the complete abolishment of the target gene expression. This indicated that target gene expression oscillations depend directly on BMP type I receptor kinase activity. N2 - Bone Morphogenetic Proteins (BMPs) stellen wichtige Regulatoren für eine Vielzahl von verschiedenen zellulären Prozessen dar. Während der Embryonalentwicklung agieren diese Proteine als Morphogene und spielen daher eine entscheidende Rolle für diesen Prozess, vor allem in der Organogenese. Durch Konzentrationsgradienten üben BMPs einen direkten Einfluss auf verschiedene zelluläre Schicksale im entwickelnden Embryo aus. Aufgrund dieser Gradienten gelangen vielfältige Signalinformationen zu den verschiedenen Zellen, welche die extrazelluläre Information in verschiedene Genexpressionsprofile und Zellschicksalsentscheidungen umwandeln. Darüber hinaus tragen BMPs wichtige Funktionen im erwachsenen Organismus, wie z.B. Gewebshomöostase oder -regeneration. Im Gegensatz zu dem verwandten TGF-ß Signaltransduktionsweg ist derzeit nur wenig über die zelluläre Übersetzung und Quantifizierung eingehender BMP-Signale bekannt. Es gibt wenige Kenntnisse über die quantitative Beziehung zwischen Signaleingang, Überträgerproteinen, ihren Zuständen sowie intrazellulären Positionen, und schließlich ihre Fähigkeit Signaleingänge systemisch zu integrieren und qualitative Antworten der Zelle zu produzieren. Eine wesentliche Voraussetzung für die effiziente Signaltransduktions-modulierung ist das vollständige Verständnis des Signalnetzwerkes auf einer quantitativen Ebene, da der BMP-Signalweg, wie auch viele andere Signalwege, ein wichtiges Ziel für medizinische Anwendungen und Medikamentenentwicklung ist. Daher untersuchte ich zunächst die subzelluläre Verteilung der wichtigsten Signalweiterleitungsproteine des BMP-Signalweges, der Smad1-Proteine, auf quantitativer Ebene und deren Reaktion auf verschiedene Stimulierungsarten und BMP-Konzentrationsstufen in murinen c2c12-Zellen. Die Ergebnisse zeigen, dass die subzelluläre Lokalisation von Smad1 unabhängig von der BMP-Konzentration ist und nur das phospho-Smad1 Level proportional zur Konzentration des Liganden steigt. Darüber hinaus befanden sich die aktiven Überträgerproteine nach Stimulierungvollständig im Zellkern. Neben der subzellulären Lokalisation von Smad1, habe ich das Genexpressionsprofil von BMP-Zielgenen analysiert. Ich untersuchte zwei endogene und frühe BMP-Zielgene sowie die Expression der stabil transgenen Gaussia Luciferase. Interessanterweise deuten die Ergebnisse dieser zwei unabhängigen Versuchsaufbauten und Detektionsmethoden auf eine oszillierende Expression der Zielgene hin. Die Amplituden der Schwingungen zeigten eine deutliche Konzentrationsabhängigkeit bei kontinuierlicher und transienter Stimulation. Außerdem aktiviert eine Kurzzeitstimulierung von 15 Minuten ebenfalls ein oszillierendes Genexpressionsprofil, welches für mindestens 30 Stunden nach der Stimulierung nachweisbar ist. Nur die Behandlung mit einem BMP Typ-I-Rezeptorkinaseinhibitor führt zur vollständigen Aufhebung der Zielgenexpression. Infolgedessen sind die Oszillationen der Zielgenexpression direkt von der Aktivität der BMP Typ-I-Rezeptorkinase abhängig. KW - Knochen-Morphogenese-Proteine KW - Signaltransduktion KW - BMP-Signaltransduktionsweg KW - Analyse KW - BMP signaling pathway KW - analysis Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-84224 ER - TY - JOUR A1 - Schubert, Maria A1 - Spahn, Martin A1 - Kneitz, Susanne A1 - Scholz, Claus Jürgen A1 - Joniau, Steven A1 - Stroebel, Philipp A1 - Riedmiller, Hubertus A1 - Kneitz, Burkhard T1 - Distinct microRNA Expression Profile in Prostate Cancer Patients with Early Clinical Failure and the Impact of let-7 as Prognostic Marker in High-Risk Prostate Cancer JF - PLoS ONE N2 - Background The identification of additional prognostic markers to improve risk stratification and to avoid overtreatment is one of the most urgent clinical needs in prostate cancer (PCa). MicroRNAs, being important regulators of gene expression, are promising biomarkers in various cancer entities, though the impact as prognostic predictors in PCa is poorly understood. The aim of this study was to identify specific miRNAs as potential prognostic markers in high-risk PCa and to validate their clinical impact. Methodology and Principal Findings We performed miRNA-microarray analysis in a high-risk PCa study group selected by their clinical outcome (clinical progression free survival (CPFS) vs. clinical failure (CF)). We identified seven candidate miRNAs (let-7a/b/c, miR-515-3p/5p, -181b, -146b, and -361) that showed differential expression between both groups. Further qRT-PCR analysis revealed down-regulation of members of the let-7 family in the majority of a large, well-characterized high-risk PCa cohort (n = 98). Expression of let-7a/b/and -c was correlated to clinical outcome parameters of this group. While let-7a showed no association or correlation with clinical relevant data, let-7b and let-7c were associated with CF in PCa patients and functioned partially as independent prognostic marker. Validation of the data using an independent high-risk study cohort revealed that let-7b, but not let-7c, has impact as an independent prognostic marker for BCR and CF. Furthermore, we identified HMGA1, a non-histone protein, as a new target of let-7b and found correlation of let-7b down-regulation with HMGA1 over-expression in primary PCa samples. Conclusion Our findings define a distinct miRNA expression profile in PCa cases with early CF and identified let-7b as prognostic biomarker in high-risk PCa. This study highlights the importance of let-7b as tumor suppressor miRNA in high-risk PCa and presents a basis to improve individual therapy for high-risk PCa patients. KW - biomarkers KW - gene expression KW - gene targeting KW - luciferase KW - MircoRNA KW - microarrays KW - oncogenes KW - prostate cancer Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-96825 ER - TY - JOUR A1 - Scharmann, Mathias A1 - Thornham, Daniel G. A1 - Grafe, T. Ulmar A1 - Federle, Walter T1 - A Novel Type of Nutritional Ant-Plant Interaction: Ant Partners of Carnivorous Pitcher Plants Prevent Nutrient Export by Dipteran Pitcher Infauna JF - PLoS ONE N2 - Many plants combat herbivore and pathogen attack indirectly by attracting predators of their herbivores. Here we describe a novel type of insect-plant interaction where a carnivorous plant uses such an indirect defence to prevent nutrient loss to kleptoparasites. The ant Camponotus schmitzi is an obligate inhabitant of the carnivorous pitcher plant Nepenthes bicalcarata in Borneo. It has recently been suggested that this ant-plant interaction is a nutritional mutualism, but the detailed mechanisms and the origin of the ant-derived nutrient supply have remained unexplained. We confirm that N. bicalcarata host plant leaves naturally have an elevated \(^{15}N/^{14}N\) stable isotope abundance ratio (\(\delta ^{15}N\)) when colonised by C. schmitzi. This indicates that a higher proportion of the plants' nitrogen is insect-derived when C. schmitzi ants are present (ca. 100%, vs. 77% in uncolonised plants) and that more nitrogen is available to them. We demonstrated direct flux of nutrients from the ants to the host plant in a \(^{15}N\) pulse-chase experiment. As C. schmitzi ants only feed on nectar and pitcher contents of their host, the elevated foliar \(\delta ^{15}N\) cannot be explained by classic ant-feeding (myrmecotrophy) but must originate from a higher efficiency of the pitcher traps. We discovered that C. schmitzi ants not only increase the pitchers' capture efficiency by keeping the pitchers' trapping surfaces clean, but they also reduce nutrient loss from the pitchers by predating dipteran pitcher inhabitants (infauna). Consequently, nutrients the pitchers would have otherwise lost via emerging flies become available as ant colony waste. The plants' prey is therefore conserved by the ants. The interaction between C. schmitzi, N. bicalcarata and dipteran pitcher infauna represents a new type of mutualism where animals mitigate the damage by nutrient thieves to a plant. KW - community KW - alternative trapping strategies KW - leaf-litter utilization KW - nepenthes bicalcarata KW - camponotus schmitzi KW - food web KW - epiphytic fern KW - nitrogen KW - prey KW - rafflesiana Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-130952 VL - 8 IS - 5 ER - TY - JOUR A1 - Rössler, Wolfgang A1 - Brill, Martin F. T1 - Parallel processing in the honeybee olfactory pathway: structure, function, and evolution JF - Journal of Comparative Physiology A N2 - Animals face highly complex and dynamic olfactory stimuli in their natural environments, which require fast and reliable olfactory processing. Parallel processing is a common principle of sensory systems supporting this task, for example in visual and auditory systems, but its role in olfaction remained unclear. Studies in the honeybee focused on a dual olfactory pathway. Two sets of projection neurons connect glomeruli in two antennal-lobe hemilobes via lateral and medial tracts in opposite sequence with the mushroom bodies and lateral horn. Comparative studies suggest that this dual-tract circuit represents a unique adaptation in Hymenoptera. Imaging studies indicate that glomeruli in both hemilobes receive redundant sensory input. Recent simultaneous multi-unit recordings from projection neurons of both tracts revealed widely overlapping response profiles strongly indicating parallel olfactory processing. Whereas lateral-tract neurons respond fast with broad (generalistic) profiles, medial-tract neurons are odorant specific and respond slower. In analogy to “what-” and “where” subsystems in visual pathways, this suggests two parallel olfactory subsystems providing “what-” (quality) and “when” (temporal) information. Temporal response properties may support across-tract coincidence coding in higher centers. Parallel olfactory processing likely enhances perception of complex odorant mixtures to decode the diverse and dynamic olfactory world of a social insect. KW - multi-unit recording KW - antennal lobe KW - glomeruli KW - projection neurons KW - mushroom bodies Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-132548 VL - 199 ER - TY - JOUR A1 - Rybalka, Nataliya A1 - Wolf, Matthias A1 - Andersen, Robert A1 - Friedl, Thomas T1 - Congruence of chloroplast- and nuclear-encoded DNA sequence variations used to assess species boundaries in the soil microalga Heterococcus (Stramenopiles, Xanthophyceae) JF - BMC Evolutionary Biology N2 - Background: Heterococcus is a microalgal genus of Xanthophyceae (Stramenopiles) that is common and widespread in soils, especially from cold regions. Species are characterized by extensively branched filaments produced when grown on agarized culture medium. Despite the large number of species described exclusively using light microscopic morphology, the assessment of species diversity is hampered by extensive morphological plasticity. Results: Two independent types of molecular data, the chloroplast-encoded psbA/rbcL spacer complemented by rbcL gene and the internal transcribed spacer 2 of the nuclear rDNA cistron (ITS2), congruently recovered a robust phylogenetic structure. With ITS2 considerable sequence and secondary structure divergence existed among the eight species, but a combined sequence and secondary structure phylogenetic analysis confined to helix II of ITS2 corroborated relationships as inferred from the rbcL gene phylogeny. Intra-genomic divergence of ITS2 sequences was revealed in many strains. The 'monophyletic species concept', appropriate for microalgae without known sexual reproduction, revealed eight different species. Species boundaries established using the molecular-based monophyletic species concept were more conservative than the traditional morphological species concept. Within a species, almost identical chloroplast marker sequences (genotypes) were repeatedly recovered from strains of different origins. At least two species had widespread geographical distributions; however, within a given species, genotypes recovered from Antarctic strains were distinct from those in temperate habitats. Furthermore, the sequence diversity may correspond to adaptation to different types of habitats or climates. Conclusions: We established a method and a reference data base for the unambiguous identification of species of the common soil microalgal genus Heterococcus which uses DNA sequence variation in markers from plastid and nuclear genomes. The molecular data were more reliable and more conservative than morphological data. KW - xanthophyceae KW - psbA/rbcL spacer KW - ITS2 KW - tool KW - RBCL KW - alignment KW - evolution KW - chlorophyta KW - RNA secondary structure KW - terrestrial habitats KW - phylogenetic trees KW - mixed models KW - green algae KW - heterococcus KW - systematics KW - molecular phylogeny KW - species concept Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-121848 SN - 1471-2148 VL - 13 IS - 39 ER - TY - JOUR A1 - Rudel, Thomas A1 - Prusty, Bhupesh K. A1 - Siegl, Christine A1 - Hauck, Petra A1 - Hain, Johannes A1 - Korhonen, Suvi J. A1 - Hiltunen-Back, Eija A1 - Poulakkainen, Mirja T1 - Chlamydia trachomatis Infection Induces Replication of Latent HHV-6 JF - PLoS ONE N2 - Human herpesvirus-6 (HHV-6) exists in latent form either as a nuclear episome or integrated into human chromosomes in more than 90% of healthy individuals without causing clinical symptoms. Immunosuppression and stress conditions can reactivate HHV-6 replication, associated with clinical complications and even death. We have previously shown that co-infection of Chlamydia trachomatis and HHV-6 promotes chlamydial persistence and increases viral uptake in an in vitro cell culture model. Here we investigated C. trachomatis-induced HHV-6 activation in cell lines and fresh blood samples from patients having Chromosomally integrated HHV-6 (CiHHV-6). We observed activation of latent HHV-6 DNA replication in CiHHV-6 cell lines and fresh blood cells without formation of viral particles. Interestingly, we detected HHV-6 DNA in blood as well as cervical swabs from C. trachomatis-infected women. Low virus titers correlated with high C. trachomatis load and vice versa, demonstrating a potentially significant interaction of these pathogens in blood cells and in the cervix of infected patients. Our data suggest a thus far underestimated interference of HHV-6 and C. trachomatis with a likely impact on the disease outcome as consequence of co-infection. KW - blood KW - chlamydia KW - chlamydia infection KW - chlamydia trachomatis KW - DNA replication KW - macrophages KW - polymerase chain reaction KW - viral load Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-96731 ER - TY - JOUR A1 - Rudel, Thomas A1 - Mehlitz, Adrian T1 - Modulation of host signaling and cellular responses by Chlamydia JF - Cell Communication and Signaling N2 - Modulation of host cell signaling and cellular functions is key to intracellular survival of pathogenic bacteria. Intracellular growth has several advantages e.g. escape from the humoral immune response and access to a stable nutrient rich environment. Growth in such a preferred niche comes at the price of an ongoing competition between the bacteria and the host as well as other microbes that compete for the very same host resources. This requires specialization and constant evolution of dedicated systems for adhesion, invasion and accommodation. Interestingly, obligate intracellular bacteria of the order Chlamydiales have evolved an impressive degree of control over several important host cell functions. In this review we summarize how Chlamydia controls its host cell with a special focus on signal transduction and cellular modulation. KW - Chlamydia KW - Invasion KW - Inclusion KW - Type III secretion KW - Tarp KW - Inc KW - Signaling KW - Trafficking Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-97225 UR - http://www.biosignaling.com/content/11/1/90 ER - TY - JOUR A1 - Rudel, Thomas A1 - Krohne, George A1 - Prusty, Bhupesh K. T1 - Reactivation of Chromosomally Integrated Human Herpesvirus-6 by Telomeric Circle Formation N2 - More than 95% of the human population is infected with human herpesvirus-6 (HHV-6) during early childhood and maintains latent HHV-6 genomes either in an extra-chromosomal form or as a chromosomally integrated HHV-6 (ciHHV-6). In addition, approximately 1% of humans are born with an inheritable form of ciHHV-6 integrated into the telomeres of chromosomes. Immunosuppression and stress conditions can reactivate latent HHV-6 replication, which is associated with clinical complications and even death. We have previously shown that Chlamydia trachomatis infection reactivates ciHHV-6 and induces the formation of extra-chromosomal viral DNA in ciHHV-6 cells. Here, we propose a model and provide experimental evidence for the mechanism of ciHHV-6 reactivation. Infection with Chlamydia induced a transient shortening of telomeric ends, which subsequently led to increased telomeric circle (t-circle) formation and incomplete reconstitution of circular viral genomes containing single viral direct repeat (DR). Correspondingly, short t-circles containing parts of the HHV-6 DR were detected in cells from individuals with genetically inherited ciHHV-6. Furthermore, telomere shortening induced in the absence of Chlamydia infection also caused circularization of ciHHV-6, supporting a t-circle based mechanism for ciHHV-6 reactivation. Author Summary: Human herpesviruses (HHVs) can reside in a lifelong non-infectious state displaying limited activity in their host and protected from immune responses. One possible way by which HHV-6 achieves this state is by integrating into the telomeric ends of human chromosomes, which are highly repetitive sequences that protect the ends of chromosomes from damage. Various stress conditions can reactivate latent HHV-6 thus increasing the severity of multiple human disorders. Recently, we have identified Chlamydia infection as a natural cause of latent HHV-6 reactivation. Here, we have sought to elucidate the molecular mechanism of HHV-6 reactivation. HHV-6 efficiently utilizes the well-organized telomere maintenance machinery of the host cell to exit from its inactive state and initiate replication to form new viral DNA. We provide experimental evidence that the shortening of telomeres, as a consequence of interference with telomere maintenance, triggers the release of the integrated virus from the chromosome. Our data provide a mechanistic basis to understand HHV-6 reactivation scenarios, which in light of the high prevalence of HHV-6 infection and the possibility of chromosomal integration of other common viruses like HHV-7 have important medical consequences for several million people worldwide. KW - chlamydia infection KW - circular DNA KW - telomeres KW - polymerase chain reaction KW - DNA electrophoresis KW - chromosomes KW - southern hybridization KW - DNA hybridization Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-111380 ER - TY - JOUR A1 - Rudel, Thomas A1 - Faulstich, Michaela A1 - Böttcher, Jan-Peter A1 - Meyer, Thomas F. A1 - Fraunholz, Martin T1 - Pilus Phase Variation Switches Gonococcal Adherence to Invasion by Caveolin-1-Dependent Host Cell Signaling JF - PLoS Pathogens N2 - Many pathogenic bacteria cause local infections but occasionally invade into the blood stream, often with fatal outcome. Very little is known about the mechanism underlying the switch from local to invasive infection. In the case of Neisseria gonorrhoeae, phase variable type 4 pili (T4P) stabilize local infection by mediating microcolony formation and inducing anti-invasive signals. Outer membrane porin PorBIA, in contrast, is associated with disseminated infection and facilitates the efficient invasion of gonococci into host cells. Here we demonstrate that loss of pili by natural pilus phase variation is a prerequisite for the transition from local to invasive infection. Unexpectedly, both T4P-mediated inhibition of invasion and PorBIA-triggered invasion utilize membrane rafts and signaling pathways that depend on caveolin-1-Y14 phosphorylation (Cav1-pY14). We identified p85 regulatory subunit of PI3 kinase (PI3K) and phospholipase Cγ1 as new, exclusive and essential interaction partners for Cav1-pY14 in the course of PorBIA-induced invasion. Active PI3K induces the uptake of gonococci via a new invasion pathway involving protein kinase D1. Our data describe a novel route of bacterial entry into epithelial cells and offer the first mechanistic insight into the switch from local to invasive gonococcal infection. KW - antibodies KW - bacterial pathogens KW - cell membranes KW - intracellular pathogens KW - neisseria gonorrhoeae KW - phosphates KW - phosphorylation KW - pili and fimbriae Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-96679 ER - TY - JOUR A1 - Rodrigues, Lénia A1 - Popov, Nikita A1 - Kaye, Kenneth M. A1 - Simas, J. Pedro T1 - Stabilization of Myc through Heterotypic Poly-Ubiquitination by mLANA Is Critical for \(\gamma\)-Herpesvirus Lymphoproliferation JF - PLoS PATHOGENS N2 - Host colonization by lymphotropic \(\gamma\)-herpesviruses depends critically on expansion of viral genomes in germinal center (GC) B-cells. Myc is essential for the formation and maintenance of GCs. Yet, the role of Myc in the pathogenesis of \(\gamma\)-cherpesviruses is still largely unknown. In this study, Myc was shown to be essential for the lymphotropic \(\gamma\)-herpesvirus MuHV- 4 biology as infected cells exhibited increased expression of Myc signature genes and the virus was unable to expand in Myc defficient GC B- cells. We describe a novel strategy of a viral protein activating Myc through increased protein stability resulting in increased progression through the cell cycle. This is acomplished by modulating a physiological posttranslational regulatory pathway of Myc. The molecular mechanism involves Myc heterotypic poly- ubiquitination mediated via the viral E3 ubiquitin- ligase mLANA protein. \(EC_5S^{mLANA}\) modulates cellular control of Myc turnover by antagonizing \(SCF^{Fbw7}\) mediated proteasomal degradation of Myc, mimicking \(SCF^{\beta-TrCP}\). The findings here reported reveal that modulation of Myc is essential for \(\gamma\)-herpesvirus persistent infection, establishing a link between virus induced lymphoproliferation and disease. KW - latency KW - murine gammaherpesvirus 68 KW - Epstein-Barr-virus KW - C-MYC KW - nuclear antigen KW - germinal center KW - B lymphocytes KW - protein KW - cells KW - beta-TRCP Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-131227 VL - 9 IS - 8 ER - TY - JOUR A1 - Rinawati, Fitria A1 - Stein, Katharina A1 - Lindner, André T1 - Climate change impacts on biodiversity-the setting of a lingering global crisis JF - Diversity N2 - Climate change has created potential major threats to global biodiversity. The multiple components of climate change are projected to affect all pillars of biodiversity, from genes over species to biome level. Of particular concerns are "tipping points" where the exceedance of ecosystem thresholds will possibly lead to irreversible shifts of ecosystems and their functioning. As biodiversity underlies all goods and services provided by ecosystems that are crucial for human survival and wellbeing, this paper presents potential effects of climate change on biodiversity, its plausible impacts on human society as well as the setting in addressing a global crisis. Species affected by climate change may respond in three ways: change, move or die. Local species extinctions or a rapidly affected ecosystem as a whole respectively might move toward its particular "tipping point", thereby probably depriving its services to human society and ending up in a global crisis. Urgent and appropriate actions within various scenarios of climate change impacts on biodiversity, especially in tropical regions, are needed to be considered. Foremost a multisectoral approach on biodiversity issues with broader policies, stringent strategies and programs at international, national and local levels is essential to meet the challenges of climate change impacts on biodiversity. KW - biodiversity KW - climate change KW - ecosystem function KW - ecosystem service KW - tropical forest Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-131866 VL - 5 IS - 1 ER - TY - JOUR A1 - Riedel, Alice A1 - Mofolo, Boitumelo A1 - Avota, Elita A1 - Schneider-Schaulies, Sibylle A1 - Meintjes, Ayton A1 - Mulder, Nicola A1 - Kneitz, Susanne T1 - Accumulation of Splice Variants and Transcripts in Response to PI3K Inhibition in T Cells JF - PLoS ONE N2 - Background Measles virus (MV) causes T cell suppression by interference with phosphatidylinositol-3-kinase (PI3K) activation. We previously found that this interference affected the activity of splice regulatory proteins and a T cell inhibitory protein isoform was produced from an alternatively spliced pre-mRNA. Hypothesis Differentially regulated and alternatively splice variant transcripts accumulating in response to PI3K abrogation in T cells potentially encode proteins involved in T cell silencing. Methods To test this hypothesis at the cellular level, we performed a Human Exon 1.0 ST Array on RNAs isolated from T cells stimulated only or stimulated after PI3K inhibition. We developed a simple algorithm based on a splicing index to detect genes that undergo alternative splicing (AS) or are differentially regulated (RG) upon T cell suppression. Results Applying our algorithm to the data, 9% of the genes were assigned as AS, while only 3% were attributed to RG. Though there are overlaps, AS and RG genes differed with regard to functional regulation, and were found to be enriched in different functional groups. AS genes targeted extracellular matrix (ECM)-receptor interaction and focal adhesion pathways, while RG genes were mainly enriched in cytokine-receptor interaction and Jak-STAT. When combined, AS/RG dependent alterations targeted pathways essential for T cell receptor signaling, cytoskeletal dynamics and cell cycle entry. Conclusions PI3K abrogation interferes with key T cell activation processes through both differential expression and alternative splicing, which together actively contribute to T cell suppression. KW - T cells KW - gene regulation KW - alternative splicing KW - measles virus KW - T cell receptors KW - reverse transcriptase-polymerase chain reaction KW - cell cycle and cell division KW - TCR signaling cascade Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-130335 VL - 8 IS - 2 ER -