TY - THES A1 - Schmitz, Michael T1 - Functional hydrophilic polymers for chemoselective coupling T1 - Funktionale, hydrophile Polymere für die chemoselektive Kopplung N2 - Chemoselective poly(oxazolines) (POx) and poly[(oligo ethylene glycol) acrylates] were synthesized. An initiator was produced for the preparation of poly(oxazoline)s capable of participating in click chemistry reactions which allows the functionalization of the polymer at the α terminus which was confirmed by 1H NMR spectroscopy. The initiator was used for the polymerization of hydrophilic 2 methyl 2 oxazoline (MeOx), whereby chemoselective, alkyne functionalized polymers could be prepared for Cu-catalyzed azide–alkyne cycloaddition. The desired molecular weight could be achieved through the living, ring opening cationic polymerization and was confirmed by 1H NMR, SEC and MALDI ToF measurements. Polymers were terminated with piperidine if no further functionalization was needed, or with an ester derivate for enabling amine attachment in a subsequent step. In addition, polymers were functionalized by termination with NaN3 in order to provide the counterpart to the azide–alkyne reaction. IR spectroscopy was suitable for the azide detection. The coupling of polymers showed the reactivity and could be confirmed by SEC, 1H NMR and IR spectroscopy. The composition of cysteine functionalized POx was completed by thiol–ene chemistry. Since the commercially available iso 2 propyl 2 oxazoline is not available for the cationic polymerization, 2 butenyl and 2 decenyl 2 oxazoline (ButenOx and DecenOx) were first prepared. The synthesis of both copolymers, based on MeOx could be confirmed by 1H NMR as well as with SEC, whereby narrow distributions with dispersities of 1.06 could be achieved. The cysteine functionalization of the copolymers was enabled by the creation of a thiazolidine component which could be synthesized by acetal and formyl protection of cysteine and subsequent functionalization with a thiol. The component enabled the reaction with a polymer by thiol–ene reaction which was started by the addition of dimethoxyphenyl-acetophenone and was catalyzed by irradiation with UV light. Both copolymers, with a shorter (polymers with BuenOx) and longer (polymers with DecenOx) hydrophobic sidechain could be functionalized. 1H NMR spectroscopic analysis showed a quantitative reaction with the thiazolidine derivate. After deprotection by acidic workup the desired, cysteine functionalized polymer could be isolated. Quantification of cysteine functions was ensured by a modified TNBSA assay, whereby the thiols were first oxidized in order to confirm an independent measurement of amine functions. Both, the TNBSA assay as well as the NMR measurement showed the desired number of cysteine residues. The cytotoxicity of functionalized polymers with different compositions was tested by a luminescent cell viability assay (LCVA). Both, the amount of cysteine functions (5–10%) in the copolymers as well as the length of the hydrophobic side chain were varied. All polymers did not show cytotoxicity up to concentrations of 10 mg∙mL-1. The cell activity and cell numbers only decreased below 50% and 20% respectively, when copolymers with 5% cysteine and longer sidechains were measured, which was attributed to a contamination of the sample itself. The cooperation partner performed Native Chemical Ligation (NCL) with model peptides and purified the products by HPLC. A sterically non demanding peptide was synthesized, consisting of an aromatic amino acid and four glycine units. The aromatic unit was used for the quantification of the polymer–peptide conjugate in the 1H NMR spectroscopy. A polymer having five cysteine side chains has been fully implemented by NCL to a conjugate of one polymer with five peptides. A sterically more demanding peptide was additionally used and MALDI ToF measurements confirmed the successful conjugation. Furthermore the cysteine functionalized polymer was used for nanogel synthesis. The thiol of the cysteine function was oxidized in an inverse mini-emulsion by H2O2, resulting in nanogels (~500 nm) which could be confirmed by SEM, AFM, DLS and NTA measurements. Besides POx, oligo (ethylene glycol)acrylates (OEGA) were polymerized; by copolymerization with the reactive pentafluorophenyl acrylate (PFPA) reactive and amphiphilic polymers were obtained. The synthesis of PFPA could be confirmed spectroscopically by 1H , 19F NMR, and by FT IR. Copolymers were synthesized by RAFT polymerization with narrow dispersities. Functionalization with an amine functionalized thiazolidine led to a hydrophilic cysteine functionalized polymer after acidic deprotection. Apart from this polymer, a thioester functionalization was successfully performed by reaction of the active polymer with a cyclic amine functionalized thioester which does not release a toxic by product (such as the resulting thiol) during NCL and thus features a very high potential to replace former thioester. N2 - Als hydrophile Polymere wurden chemoselektive Poly(oxazoline) (POx) und Poly(oligoethylenglykol)acrylate synthetisiert. Für die Darstellung von „klickfähigen“ Poly(oxazolinen) wurde ein Initiator synthetisiert, welcher eine Funktionalisierung des Polymers am α Terminus ermöglicht. Die erfolgreiche Darstellung wurde mittels 1H NMR Spektroskopie bewiesen. Der Initiator wurde für die Polymerisation von hydrophilem 2 Methyl 2 oxazoline (MeOx) eingesetzt, wodurch chemoselektive, Alkin funktionalisierte Polymere dargestellt werden konnten. Die gewünschten Molmassen konnten durch die lebende, Polymerisation erreicht werden und durch 1H NMR, GPC und MALDI Messungen bewiesen werden. Die Terminierung der Polymere erfolgte durch Abbruch mit Piperidin oder durch Abbruch mit einem Ester Derivat, um die Anbindung mit Aminen zu ermöglichen. Außerdem wurden Polymere durch die Terminierung mit NaN3 funktionalisiert, um das Pendant zur Azid–Alkin¬-Cycloaddition liefern zu können. Die IR-Spektroskopie eignete sich hierbei für die Azid-Detektion. Die Kopplung beider Polymere, zum Nachweis der Reaktivität, konnte durch die GPC, 1H NMR und IR Spektroskopie bestätigt werden. Die Darstellung von Cystein funktionalisierten POx konnte durch Thiol–en Chemie realisiert werden. Dazu wurde ein Copolymer mit Allylseitenketten synthetisiert. Da das kommerziell erhältliche iso-Propyloxazoline nicht für die kationische Polymerisation zur Verfügung steht, wurden Butenyl und Decenyloxazolin (ButenOx und DecenOx) synthetisiert. Die Darstellung des Copolymers, basierend auf MeOx, konnte mit 1H NMR und der GPC bestätigt werden. Enge Verteilungen bis zu einer Disperistät von 1.06 wurden erreicht. Die Cysteinfunktionalisierung der Copolymere wurde durch die Synthese eines Thiazolidinbausteins ermöglicht. Dieser konnte durch Acetal- und Formylschützung von Cystein und anschließender Funktionalisierung mit einem Thiol dargestellt werden. Der Baustein ermöglichte die Umsetzung des Polymers mit dem geschützten Cysteinderivat. Diese wurde durch Zugabe von Dimethoxyphenyl-acetophenon gestartet und durch Bestrahlung mit UV-Licht katalysiert. Sowohl Copolymere mit einer kürzeren (Einsatz von ButenOx) und langen (Einsatz von DecenOx) hydrophoben Seitenkette konnten mittels Thiol–en Chemie funktionalisiert werden. 1H NMR spektroskopische Analysen zeigten eine quantitative Umsetzung mit dem Thiazolidinderivat. Nach Entschützung konnte das gewünschte, Cystein funktionalisierte Polymer isoliert werden. Die Quantifizierung der Cysteinfunktionen wurde durch einen modifizierten TNBSA assay gewährleistet, wobei die Thiole des Cysteins zunächst oxidiert wurden, damit diese keinen Einfluss auf die Messung haben konnten. Sowohl der TNBSA assay als auch die NMR-spektroskopische Messmethode zeigte die gewünschten Anzahlen von Cysteinresten. Die funktionalisierten Polymere wurden mit unterschiedlichen Zusammensetzungen auf Zelltoxizität geprüft. Der Anteil an Cysteinfunktionen (5 10%) und die Länge der hydrophoben Seitenkette wurden variiert. Alle Polymere waren bis zu einer Konzentration von 10 mg∙mL-1 nicht toxisch. Die Zellaktivität und Zellzahl sank nur beim Copolymer mit 5% Cystein und langer Seitenkette unter einen Wert von 50% bzw. 20%, was auf eine Verunreinigung der Probe zurückgeführt wurde. Der Kooperationspartner führte die Native Chemische Ligation (NCL) mit verschiedenen Modellpeptiden durch und reinigte die Produkte mittels HPLC. Es wurden sterisch unanspruchsvolle Peptide synthetisiert, die aus einer aromatischen Aminosäure und vier Glycineinheiten bestanden. Der Aromat konnte in der 1H NMR Spektroskopie für die Quantifizierung der Polymer–Peptid Konjugate genutzt werden. Ein Polymer mit fünf Cysteinseitenketten wurde vollständig mittels NCL zu einem Konjugat aus einem Polymer mit fünf Peptiden umgesetzt. Ein sterisch anspruchsvolleres Peptid wurde im Nachhinein verwendet, wobei MALDI-ToF Messungen die Konjugation bestätigten. Das cysteinfunktionaliserte Polymer wurde außerdem für die Nanogelsynthese verwendet. Hierbei wurde das Thiol der Cysteinfunktion mittels H2O2 in einer inversen Miniemulsion oxidiert, woraus Nanogele resultierten, die mittels REM, AFM, DLS und NTA bestätigt werden konnten. Neben POx wurden Copolymere aus (Oligoehtylenglykol)acrylate und Pentafluorophenylacrylat synthetisiert und reaktive amphiphile Polymere erhalten. Die Darstellung von Pentafluorophenylacrylat konnte durch 1H und 19F NMR als auch durch FT IR spektroskopisch bestätigt werden. Copolymere wurden mittels RAFT Polymerisation mit engen Dispersitäten und den gewünschten Molmassen synthetisiert. Die Funktionalisierung mit einem aminfunktionalisierten Thiazolidin führte nach saurer Entschützung zu einem hydrophilen cysteinfunktionalisierten Polymer. Neben dieser Komponente konnte eine Thioesterfunktionalisierung durch Reaktion mit einem cyclischen aminfunktionalisierten Thiolacton erfolgreich durchgeführt werden. KW - Konjugate KW - Functional hydrophilic polymers KW - chemoselective KW - native chemical ligation KW - Polyoxazoline KW - Polymer-peptide-conjugate KW - Polyoxazoline KW - hydrophilic polymers KW - chemosensitivity Y1 - 2016 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-145629 ER - TY - JOUR A1 - Peter, Stefanie A1 - Bultinck, Jennyfer A1 - Myant, Kevin A1 - Jaenicke, Laura A. A1 - Walz, Susanne A1 - Müller, Judith A1 - Gmachl, Michael A1 - Treu, Matthias A1 - Boehmelt, Guido A1 - Ade, Casten P. A1 - Schmitz, Werner A1 - Wiegering, Armin A1 - Otto, Christoph A1 - Popov, Nikita A1 - Sansom, Owen A1 - Kraut, Norbert A1 - Eilers, Martin T1 - H Tumor cell-specific inhibition of MYC function using small molecule inhibitors of the HUWE1 ubiquitin ligase JF - EMBO Molecular Medicine N2 - Deregulated expression of MYC is a driver of colorectal carcinogenesis, necessitating novel strategies to inhibit MYC function. The ubiquitin ligase HUWE1 (HECTH9, ARF-BP1, MULE) associates with both MYC and the MYC-associated protein MIZ1. We show here that HUWE1 is required for growth of colorectal cancer cells in culture and in orthotopic xenograft models. Using high-throughput screening, we identify small molecule inhibitors of HUWE1, which inhibit MYC-dependent transactivation in colorectal cancer cells, but not in stem and normal colon epithelial cells. Inhibition of HUWE1 stabilizes MIZ1. MIZ1 globally accumulates on MYC target genes and contributes to repression of MYC-activated target genes upon HUWE1 inhibition. Our data show that transcriptional activation by MYC in colon cancer cells requires the continuous degradation of MIZ1 and identify a novel principle that allows for inhibition of MYC function in tumor cells. KW - colorectal cancer KW - HUWE1 KW - MIZ1 KW - MYC KW - ubiquitination KW - cancer KW - digestive system KW - pharmacology KW - drug discovery Y1 - 2014 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-118132 SN - 1757-4684 VL - 6 IS - 12 ER - TY - JOUR A1 - Jungst, Tomasz A1 - Pennings, Iris A1 - Schmitz, Michael A1 - Rosenberg, Antoine J. W. P. A1 - Groll, Jürgen A1 - Gawlitta, Debby T1 - Heterotypic Scaffold Design Orchestrates Primary Cell Organization and Phenotypes in Cocultured Small Diameter Vascular Grafts JF - Advanced Functional Materials N2 - To facilitate true regeneration, a vascular graft should direct the evolution of a neovessel to obtain the function of a native vessel. For this, scaffolds have to permit the formation of an intraluminal endothelial cell monolayer, mimicking the tunica intima. In addition, when attempting to mimic a tunica media‐like outer layer, the stacking and orientation of vascular smooth muscle cells (vSMCs) should be recapitulated. An integral scaffold design that facilitates this has so far remained a challenge. A hybrid fabrication approach is introduced by combining solution electrospinning and melt electrowriting. This allows a tissue‐structure mimetic, hierarchically bilayered tubular scaffold, comprising an inner layer of randomly oriented dense fiber mesh and an outer layer of microfibers with controlled orientation. The scaffold supports the organization of a continuous luminal endothelial monolayer and oriented layers of vSM‐like cells in the media, thus facilitating control over specific and tissue‐mimetic cellular differentiation and support of the phenotypic morphology in the respective layers. Neither soluble factors nor a surface bioactivation of the scaffold is needed with this approach, demonstrating that heterotypic scaffold design can direct physiological tissue‐like cell organization and differentiation. KW - biofabricated vascular graft KW - heterotypic scaffold design KW - hybrid fabrication KW - primary vascular smooth muscle‐like cells (vSMCs) KW - melt electrowriting (MEW) Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-217039 VL - 29 ER - TY - JOUR A1 - Barej, Michael F. A1 - Schmitz, Andreas A1 - Penner, Johannes A1 - Doumbia, Joseph A1 - Sandberger-Loua, Laura A1 - Hirschfeld, Mareike A1 - Brede, Christian A1 - Emmrich, Mike A1 - Kouamé, N'Goran Germain A1 - Hillers, Annika A1 - Gonwouo, Nono L. A1 - Nopper, Joachim A1 - Adeba, Patrick Joël A1 - Bangoura, Mohamed A. A1 - Gage, Ceri A1 - Anderson, Gail A1 - Rödel, Mark-Oliver T1 - Life in the spray zone - overlooked diversity in West African torrent-frogs (Anura, Odontobatrachidae, Odontobatrachus) JF - Zoosystematics and Evolution N2 - West African torrent-frogs of the genus Odontobatrachus currently belong to a single species: Odontobatrachus natator (Boulenger, 1905). Recently, molecular results and biogeographic separation led to the recognition of five Operational Taxonomic Units (OTUs) thus identifying a species-complex. Based on these insights, morphological analyses on more than 150 adult specimens, covering the entire distribution of the family and all OTUs, were carried out. Despite strong morphological congruence, combinations of morphological characters made the differentiation of OTUs successful and allowed the recognition of five distinct species: Odontobatrachus natator, and four species new to science: Odontobatrachus arndti sp. n., O. fouta sp. n., O. smithi sp. n. and O. ziama sp. n. All species occur in parapatry: Odontobatrachus natator is known from western Guinea to eastern Liberia, O. ziama sp. n. from eastern Guinea, O. smithi sp. n. and O. fouta sp. n. from western Guinea, O. arndti sp. n. from the border triangle Guinea-Liberia-Cote d'Ivoire. In addition, for the first time the advertisement call of a West African torrent-frog (O. arndti sp. n.) is described. KW - Guinean rain forest KW - molecular data KW - conservation KW - Upper Guinea KW - new species KW - Phrynobatrachus amphibia KW - Arthroleptis amphibia KW - ivory coast KW - genus KW - biodiversity KW - Ranidae KW - Petropedetidae KW - biodiversity hotspot KW - rainforest KW - taxonomy KW - Amphibia Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-144254 VL - 91 IS - 2 ER - TY - JOUR A1 - Kannapin, Felix A1 - Schmitz, Tobias A1 - Hansmann, Jan A1 - Schlegel, Nicolas A1 - Meir, Michael T1 - Measurements of transepithelial electrical resistance (TEER) are affected by junctional length in immature epithelial monolayers JF - Histochemistry and Cell Biology N2 - The measurement of transepithelial electrical resistance (TEER) is a common technique to determine the barrier integrity of epithelial cell monolayers. However, it is remarkable that absolute TEER values of similar cell types cultured under comparable conditions show an immense heterogeneity. Based on previous observations, we hypothesized that the heterogeneity of absolute TEER measurements can not only be explained by maturation of junctional proteins but rather by dynamics in the absolute length of cell junctions within monolayers. Therefore, we analyzed TEER in epithelial cell monolayers of Caco2 cells during their differentiation, with special emphasis on both changes in the junctional complex and overall cell morphology within monolayers. We found that in epithelial Caco2 monolayers TEER increased until confluency, then decreased for some time, which was then followed by an additional increase during junctional differentiation. In contrast, permeability of macromolecules measured at different time points as 4 kDA fluorescein isothiocyanate (FITC)-dextran flux across monolayers steadily decreased during this time. Detailed analysis suggested that this observation could be explained by alterations of junctional length along the cell borders within monolayers during differentiation. In conclusion, these observations confirmed that changes in cell numbers and consecutive increase of junctional length have a critical impact on TEER values, especially at stages of early confluency when junctions are immature. KW - Caco2 cells KW - TEER KW - barrier models KW - impedance spectroscopy KW - permeability Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-267465 SN - 1432-119X VL - 156 IS - 6 ER - TY - JOUR A1 - Bohnert, Simone A1 - Reinert, Christoph A1 - Trella, Stefanie A1 - Schmitz, Werner A1 - Ondruschka, Benjamin A1 - Bohnert, Michael T1 - Metabolomics in postmortem cerebrospinal fluid diagnostics: a state-of-the-art method to interpret central nervous system–related pathological processes JF - International Journal of Legal Medicine N2 - In the last few years, quantitative analysis of metabolites in body fluids using LC/MS has become an established method in laboratory medicine and toxicology. By preparing metabolite profiles in biological specimens, we are able to understand pathophysiological mechanisms at the biochemical and thus the functional level. An innovative investigative method, which has not yet been used widely in the forensic context, is to use the clinical application of metabolomics. In a metabolomic analysis of 41 samples of postmortem cerebrospinal fluid (CSF) samples divided into cohorts of four different causes of death, namely, cardiovascular fatalities, isoIated torso trauma, traumatic brain injury, and multi-organ failure, we were able to identify relevant differences in the metabolite profile between these individual groups. According to this preliminary assessment, we assume that information on biochemical processes is not gained by differences in the concentration of individual metabolites in CSF, but by a combination of differently distributed metabolites forming the perspective of a new generation of biomarkers for diagnosing (fatal) TBI and associated neuropathological changes in the CNS using CSF samples. KW - CSF KW - cerebrospinal fluid KW - forensic neuropathology KW - forensic neurotraumatology KW - biomarker KW - metabolomics Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-235724 SN - 0937-9827 VL - 135 ER - TY - JOUR A1 - Bohnert, Simone A1 - Wirth, Christoph A1 - Schmitz, Werner A1 - Trella, Stefanie A1 - Monoranu, Camelia-Maria A1 - Ondruschka, Benjamin A1 - Bohnert, Michael T1 - Myelin basic protein and neurofilament H in postmortem cerebrospinal fluid as surrogate markers of fatal traumatic brain injury JF - International Journal of Legal Medicine N2 - The aim of this study was to investigate if the biomarkers myelin basic protein (MBP) and neurofilament-H (NF-H) yielded informative value in forensic diagnostics when examining cadaveric cerebrospinal fluid (CSF) biochemically via an enzyme-linked immunosorbent assay (ELISA) and comparing the corresponding brain tissue in fatal traumatic brain injury (TBI) autopsy cases by immunocytochemistry versus immunohistochemistry. In 21 trauma and 19 control cases, CSF was collected semi-sterile after suboccipital puncture and brain specimens after preparation. The CSF MBP (p = 0.006) and NF-H (p = 0.0002) levels after TBI were significantly higher than those in cardiovascular controls. Immunohistochemical staining against MBP and against NF-H was performed on cortical and subcortical samples from also biochemically investigated cases (5 TBI cases/5 controls). Compared to the controls, the TBI cases showed a visually reduced staining reaction against MBP or repeatedly ruptured neurofilaments against NF-H. Immunocytochemical tests showed MBP-positive phagocytizing macrophages in CSF with a survival time of > 24 h. In addition, numerous TMEM119-positive microglia could be detected with different degrees of staining intensity in the CSF of trauma cases. As a result, we were able to document that elevated levels of MBP and NF-H in the CSF should be considered as useful neuroinjury biomarkers of traumatic brain injury. KW - biofluid KW - CSF KW - cerebrospinal fluid KW - forensic neuropathology KW - forensic neurotraumatology KW - biomarker Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-266929 SN - 1437-1596 VL - 135 IS - 4 ER - TY - JOUR A1 - Mayer, Alexander E. A1 - Löffler, Mona C. A1 - Loza Valdés, Angel E. A1 - Schmitz, Werner A1 - El-Merahbi, Rabih A1 - Trujillo-Viera, Jonathan A1 - Erk, Manuela A1 - Zhang, Thianzhou A1 - Braun, Ursula A1 - Heikenwalder, Mathias A1 - Leitges, Michael A1 - Schulze, Almut A1 - Sumara, Grzegorz T1 - The kinase PKD3 provides negative feedback on cholesterol and triglyceride synthesis by suppressing insulin signaling JF - Science Signaling N2 - Hepatic activation of protein kinase C (PKC) isoforms by diacylglycerol (DAG) promotes insulin resistance and contributes to the development of type 2 diabetes (T2D). The closely related protein kinase D (PKD) isoforms act as effectors for DAG and PKC. Here, we showed that PKD3 was the predominant PKD isoform expressed in hepatocytes and was activated by lipid overload. PKD3 suppressed the activity of downstream insulin effectors including the kinase AKT and mechanistic target of rapamycin complex 1 and 2 (mTORC1 and mTORC2). Hepatic deletion of PKD3 in mice improved insulin-induced glucose tolerance. However, increased insulin signaling in the absence of PKD3 promoted lipogenesis mediated by SREBP (sterol regulatory element-binding protein) and consequently increased triglyceride and cholesterol content in the livers of PKD3-deficient mice fed a high-fat diet. Conversely, hepatic-specific overexpression of a constitutively active PKD3 mutant suppressed insulin-induced signaling and caused insulin resistance. Our results indicate that PKD3 provides feedback on hepatic lipid production and suppresses insulin signaling. Therefore, manipulation of PKD3 activity could be used to decrease hepatic lipid content or improve hepatic insulin sensitivity. KW - Protein kinase D3 (PKD3) KW - cholesterol KW - diacylglycerol (DAG) KW - liver KW - metabolism Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-250025 ET - accepted manuscript ER -