TY  - JOUR
A1  - Buchner, Erich
A1  - Blanco Redondo, Beatriz
A1  - Bunz, Melanie
A1  - Halder, Partho
A1  - Sadanandappa, Madhumala K.
A1  - Mühlbauer, Barbara
A1  - Erwin, Felix
A1  - Hofbauer, Alois
A1  - Rodrigues, Veronica
A1  - VijayRaghavan, K.
A1  - Ramaswami, Mani
A1  - Rieger, Dirk
A1  - Wegener, Christian
A1  - Förster, Charlotte
T1  - Identification and Structural Characterization of Interneurons of the Drosophila Brain by Monoclonal Antibodies of the Würzburg Hybridoma Library
JF  - PLoS ONE
N2  - Several novel synaptic proteins have been identified by monoclonal antibodies (mAbs) of the Würzburg hybridoma library generated against homogenized Drosophila brains, e.g. cysteine string protein, synapse-associated protein of 47 kDa, and Bruchpilot. However, at present no routine technique exists to identify the antigens of mAbs of our library that label only a small number of cells in the brain. Yet these antibodies can be used to reproducibly label and thereby identify these cells by immunohistochemical staining. Here we describe the staining patterns in the Drosophila brain for ten mAbs of the Würzburg hybridoma library. Besides revealing the neuroanatomical structure and distribution of ten different sets of cells we compare the staining patterns with those of antibodies against known antigens and GFP expression patterns driven by selected Gal4 lines employing regulatory sequences of neuronal genes. We present examples where our antibodies apparently stain the same cells in different Gal4 lines suggesting that the corresponding regulatory sequences can be exploited by the split-Gal4 technique for transgene expression exclusively in these cells. The detection of Gal4 expression in cells labeled by mAbs may also help in the identification of the antigens recognized by the antibodies which then in addition to their value for neuroanatomy will represent important tools for the characterization of the antigens. Implications and future strategies for the identification of the antigens are discussed.
KW  - cell staining
KW  - drosophila melanogaster
KW  - gene expression
KW  - hybridomas
KW  - immune serum
KW  - library screening
KW  - monoclonal antibodies
KW  - neurons
Y1  - 2013
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-97109
ER  - 
TY  - JOUR
A1  - Conrad, Thomas
A1  - Albrecht, Anne-Susann
A1  - Rodrigues de Melo Costa, Veronica
A1  - Sauer, Sascha
A1  - Meierhofer, David
A1  - Andersson Ørom, Ulf
T1  - Serial interactome capture of the human cell nucleus
JF  - Nature Communications
N2  - Novel RNA-guided cellular functions are paralleled by an increasing number of RNA-binding proteins (RBPs). Here we present ‘serial RNA interactome capture’ (serIC), a multiple purification procedure of ultraviolet-crosslinked poly(A)–RNA–protein complexes that enables global RBP detection with high specificity. We apply serIC to the nuclei of proliferating K562 cells to obtain the first human nuclear RNA interactome. The domain composition of the 382 identified nuclear RBPs markedly differs from previous IC experiments, including few factors without known RNA-binding domains that are in good agreement with computationally predicted RNA binding. serIC extends the number of DNA–RNA-binding proteins (DRBPs), and reveals a network of RBPs involved in p53 signalling and double-strand break repair. serIC is an effective tool to couple global RBP capture with additional selection or labelling steps for specific detection of highly purified RBPs.
KW  - human cell nucleus
KW  - serial RNA interactome capture
KW  - RNA-binding proteins
Y1  - 2016
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-166172
VL  - 7
IS  - 11212
ER  -