TY - INPR A1 - Nassourou, Mohamadou T1 - A Knowledge-based Hybrid Statistical Classifier for Reconstructing the Chronology of the Quran N2 - Computationally categorizing Quran’s chapters has been mainly confined to the determination of chapters’ revelation places. However this broad classification is not sufficient to effectively and thoroughly understand and interpret the Quran. The chronology of revelation would not only improve comprehending the philosophy of Islam, but also the easiness of implementing and memorizing its laws and recommendations. This paper attempts estimating possible chapters’ dates of revelation through their lexical frequency profiles. A hybrid statistical classifier consisting of stemming and clustering algorithms for comparing lexical frequency profiles of chapters, and deriving dates of revelation has been developed. The classifier is trained using some chapters with known dates of revelation. Then it classifies chapters with uncertain dates of revelation by computing their proximity to the training ones. The results reported here indicate that the proposed methodology yields usable results in estimating dates of revelation of the Quran’s chapters based on their lexical contents. KW - Text Mining KW - Maschinelles Lernen KW - text categorization KW - Bayesian classifier KW - distance-based classifier KW - Quran Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-54712 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - A Rule-based Statistical Classifier for Determining a Base Text and Ranking Witnesses In Textual Documents Collation Process N2 - Given a collection of diverging documents about some lost original text, any person interested in the text would try reconstructing it from the diverging documents. Whether it is eclecticism, stemmatics, or copy-text, one is expected to explicitly or indirectly select one of the documents as a starting point or as a base text, which could be emended through comparison with remaining documents, so that a text that could be designated as the original document is generated. Unfortunately the process of giving priority to one of the documents also known as witnesses is a subjective approach. In fact even Cladistics, which could be considered as a computer-based approach of implementing stemmatics, does not present or recommend users to select a certain witness as a starting point for the process of reconstructing the original document. In this study, a computational method using a rule-based Bayesian classifier is used, to assist text scholars in their attempts of reconstructing a non-existing document from some available witnesses. The method developed in this study consists of selecting a base text successively and collating it with remaining documents. Each completed collation cycle stores the selected base text and its closest witness, along with a weighted score of their similarities and differences. At the end of the collation process, a witness selected more often by majority of base texts is considered as the probable base text of the collection. Witnesses’ scores are weighted using a weighting system, based on effects of types of textual modifications on the process of reconstructing original documents. Users have the possibility to select between baseless and base text collation. If a base text is selected, the task is reduced to ranking the witnesses with respect to the base text, otherwise a base text as well as ranking of the witnesses with respect to the base text are computed and displayed on a histogram. KW - Textvergleich KW - Text Mining KW - Gothenburg Modell KW - Bayes-Klassifikator KW - Textual document collation KW - Base text KW - Gothenburg model KW - Bayesian classifier KW - Textual alterations weighting system Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-57465 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Assisting Analysis and Understanding of Quran Search Results with Interactive Scatter Plots and Tables N2 - The Quran is the holy book of Islam consisting of 6236 verses divided into 114 chapters called suras. Many verses are similar and even identical. Searching for similar texts (e.g verses) could return thousands of verses, that when displayed completely or partly as textual list would make analysis and understanding difficult and confusing. Moreover it would be visually impossible to instantly figure out the overall distribution of the retrieved verses in the Quran. As consequence reading and analyzing the verses would be tedious and unintuitive. In this study a combination of interactive scatter plots and tables has been developed to assist analysis and understanding of the search result. Retrieved verses are clustered by chapters, and a weight is assigned to each cluster according to number of verses it contains, so that users could visually identify most relevant areas, and figure out the places of revelation of the verses. Users visualize the complete result and can select a region of the plot to zoom in, click on a marker to display a table containing verses with English translation side by side. KW - Text Mining KW - Visualisierung KW - Koran KW - Information Visualization KW - Visual Text Mining KW - Scatter Plot KW - Quran Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-55840 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Assisting Understanding, Retention, and Dissemination of Religious Texts Knowledge with Modeling, and Visualization Techniques: The Case of The Quran N2 - Learning a book in general involves reading it, underlining important words, adding comments, summarizing some passages, and marking up some text or concepts. Once deeper understanding is achieved, one would like to organize and manage her/his knowledge in such a way that, it could be easily remembered and efficiently transmitted to others. In this paper, books organized in terms of chapters consisting of verses, are considered as the source of knowledge to be modeled. The knowledge model consists of verses with their metadata and semantic annotations. The metadata represent the multiple perspectives of knowledge modeling. Verses with their metadata and annotations form a meta-model, which will be published on a web Mashup. The meta-model with linking between its elements constitute a knowledge base. An XML-based annotation system breaking down the learning process into specific tasks, helps constructing the desired meta-model. The system is made up of user interfaces for creating metadata, annotating chapters’ contents according to user selected semantics, and templates for publishing the generated knowledge on the Internet. The proposed software system improves comprehension and retention of knowledge contained in religious texts through modeling and visualization. The system has been applied to the Quran, and the result obtained shows that multiple perspectives of information modeling can be successfully applied to religious texts. It is expected that this short ongoing study would motivate others to engage in devising and offering software systems for cross-religions learning. KW - Wissensmanagement KW - Koran KW - Knowledge Modeling KW - Meta-model KW - Knowledge Management KW - Content Management KW - Quran Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-55927 ER - TY - JOUR A1 - Mandel, Alexander A1 - Hörnlein, Alexander A1 - Ifland, Marianus A1 - Lüneburg, Edeltraud A1 - Deckert, Jürgen A1 - Puppe, Frank T1 - Aufwandsanalyse für computerunterstützte Multiple-Choice Papierklausuren T1 - Cost analysis for computer supported multiple-choice paper examinations JF - GMS Journal for Medical Education N2 - Introduction: Multiple-choice-examinations are still fundamental for assessment in medical degree programs. In addition to content related research, the optimization of the technical procedure is an important question. Medical examiners face three options: paper-based examinations with or without computer support or completely electronic examinations. Critical aspects are the effort for formatting, the logistic effort during the actual examination, quality, promptness and effort of the correction, the time for making the documents available for inspection by the students, and the statistical analysis of the examination results. Methods: Since three semesters a computer program for input and formatting of MC-questions in medical and other paper-based examinations is used and continuously improved at Wuerzburg University. In the winter semester (WS) 2009/10 eleven, in the summer semester (SS) 2010 twelve and in WS 2010/11 thirteen medical examinations were accomplished with the program and automatically evaluated. For the last two semesters the remaining manual workload was recorded. Results: The cost of the formatting and the subsequent analysis including adjustments of the analysis of an average examination with about 140 participants and about 35 questions was 5-7 hours for exams without complications in the winter semester 2009/2010, about 2 hours in SS 2010 and about 1.5 hours in the winter semester 2010/11. Including exams with complications, the average time was about 3 hours per exam in SS 2010 and 2.67 hours for the WS 10/11. Discussion: For conventional multiple-choice exams the computer-based formatting and evaluation of paper-based exams offers a significant time reduction for lecturers in comparison with the manual correction of paper-based exams and compared to purely electronically conducted exams it needs a much simpler technological infrastructure and fewer staff during the exam." N2 - Einleitung: Multiple-Choice-Klausuren spielen immer noch eine herausragende Rolle für fakultätsinterne medizinische Prüfungen. Neben inhaltlichen Arbeiten stellt sich die Frage, wie die technische Abwicklung optimiert werden kann. Für Dozenten in der Medizin gibt es zunehmend drei Optionen zur Durchführung von MC-Klausuren: Papierklausuren mit oder ohne Computerunterstützung oder vollständig elektronische Klausuren. Kritische Faktoren sind der Aufwand für die Formatierung der Klausur, der logistische Aufwand bei der Klausurdurchführung, die Qualität, Schnelligkeit und der Aufwand der Klausurkorrektur, die Bereitstellung der Dokumente für die Einsichtnahme, und die statistische Analyse der Klausurergebnisse. Methoden: An der Universität Würzburg wird seit drei Semestern ein Computerprogramm zur Eingabe und Formatierung der MC-Fragen in medizinischen und anderen Papierklausuren verwendet und optimiert, mit dem im Wintersemester (WS) 2009/2010 elf, im Sommersemester (SS) 2010 zwölf und im WS 2010/11 dreizehn medizinische Klausuren erstellt und anschließend die eingescannten Antwortblätter automatisch ausgewertet wurden. In den letzten beiden Semestern wurden die Aufwände protokolliert. Ergebnisse: Der Aufwand der Formatierung und der Auswertung einschl. nachträglicher Anpassung der Auswertung einer Durchschnittsklausur mit ca. 140 Teilnehmern und ca. 35 Fragen ist von 5-7 Stunden für Klausuren ohne Komplikation im WS 2009/2010 über ca. 2 Stunden im SS 2010 auf ca. 1,5 Stunden im WS 2010/11 gefallen. Einschließlich der Klausuren mit Komplikationen bei der Auswertung betrug die durchschnittliche Zeit im SS 2010 ca. 3 Stunden und im WS 10/11 ca. 2,67 Stunden pro Klausur. Diskussion: Für konventionelle Multiple-Choice-Klausuren bietet die computergestützte Formatierung und Auswertung von Papierklausuren einen beträchtlichen Zeitvorteil für die Dozenten im Vergleich zur manuellen Korrektur von Papierklausuren und benötigt im Vergleich zu rein elektronischen Klausuren eine deutlich einfachere technische Infrastruktur und weniger Personal bei der Klausurdurchführung. KW - Multiple-Choice Prüfungen KW - Automatisierte Prüfungskorrektur KW - Aufwandsanalyse KW - Educational Measurement (I2.399) KW - Self-Evaluation Programs (I2.399.780) KW - Multiple-Choice Examination KW - Cost Analysis Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-134386 VL - 28 IS - 4 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Computer-based Textual Documents Collation System for Reconstructing the Original Text from Automatically Identified Base Text and Ranked Witnesses N2 - Given a collection of diverging documents about some lost original text, any person interested in the text would try reconstructing it from the diverging documents. Whether it is eclecticism, stemmatics, or copy-text, one is expected to explicitly or indirectly select one of the documents as a starting point or as a base text, which could be emended through comparison with remaining documents, so that a text that could be designated as the original document is generated. Unfortunately the process of giving priority to one of the documents also known as witnesses is a subjective approach. In fact even Cladistics, which could be considered as a computer-based approach of implementing stemmatics, does not present or recommend users to select a certain witness as a starting point for the process of reconstructing the original document. In this study, a computational method using a rule-based Bayesian classifier is used, to assist text scholars in their attempts of reconstructing a non-existing document from some available witnesses. The method developed in this study consists of selecting a base text successively and collating it with remaining documents. Each completed collation cycle stores the selected base text and its closest witness, along with a weighted score of their similarities and differences. At the end of the collation process, a witness selected more often by majority of base texts is considered as the probable base text of the collection. Witnesses’ scores are weighted using a weighting system, based on effects of types of textual modifications on the process of reconstructing original documents. Users have the possibility to select between baseless and base text collation. If a base text is selected, the task is reduced to ranking the witnesses with respect to the base text, otherwise a base text as well as ranking of the witnesses with respect to the base text are computed and displayed on a bar diagram. Additionally this study includes a recursive algorithm for automatically reconstructing the original text from the identified base text and ranked witnesses. KW - Textvergleich KW - Text Mining KW - Textual document collation KW - Base text KW - Reconstruction of original text KW - Gothenburg model KW - Bayesian classifier KW - Textual alterations weighting system Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-65749 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Computing Generic Causes of Revelation of the Quranic Verses Using Machine Learning Techniques N2 - Because many verses of the holy Quran are similar, there is high probability that, similar verses addressing same issues share same generic causes of revelation. In this study, machine learning techniques have been employed in order to automatically derive causes of revelation of Quranic verses. The derivation of the causes of revelation is viewed as a classification problem. Initially the categories are based on the verses with known causes of revelation, and the testing set consists of the remaining verses. Based on a computed threshold value, a naïve Bayesian classifier is used to categorize some verses. After that, using a decision tree classifier the remaining uncategorized verses are separated into verses that contain indicators (resultative connectors, causative expressions…), and those that do not. As for those verses having indicators, each one is segmented into its constituent clauses by identification of the linking indicators. Then a dominant clause is extracted and considered either as the cause of revelation, or post-processed by adding or subtracting some terms to form a causal clause that constitutes the cause of revelation. Concerning remaining unclassified verses without indicators, a naive Bayesian classifier is again used to assign each one of them to one of the existing classes based on features and topics similarity. As for verses that could not be classified so far, manual classification was made by considering each verse as a category on its own. The result obtained in this study is encouraging, and shows that automatic derivation of Quranic verses’ generic causes of revelation is achievable, and reasonably reliable for understanding and implementing the teachings of the Quran. KW - Text Mining KW - Koran KW - Text mining KW - Statistical classifiers KW - Text segmentation KW - Causes of revelation KW - Quran Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-66083 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Design and Implementation of a Model-driven XML-based Integrated System Architecture for Assisting Analysis, Understanding, and Retention of Religious Texts:The Case of The Quran N2 - Learning a book in general involves reading it, underlining important words, adding comments, summarizing some passages, and marking up some text or concepts. Once deeper understanding is achieved, one would like to organize and manage her/his knowledge in such a way that, it could be easily remembered and efficiently transmitted to others. This paper discusses about modeling religious texts using semantic XML markup based on frame-based knowledge representation, with the purpose of assisting understanding, retention, and sharing of knowledge they contain. In this study, books organized in terms of chapters made up of verses are considered as the source of knowledge to model. Some metadata representing the multiple perspectives of knowledge modeling are assigned to each chapter and verse. Chapters and verses with their metadata form a meta-model, which is represented using frames, and published on a web mashup. An XML-based annotation and visualization system equipped with user interfaces for creating static and dynamic metadata, annotating chapters’ contents according to user selected semantics, and templates for publishing generated knowledge on the Internet, has been developed. The system has been applied to the Quran, and the result obtained shows that multiple perspectives of information modeling can be successfully applied to religious texts, in order to support analysis, understanding, and retention of the texts. KW - Wissensrepräsentation KW - Wissensmanagement KW - Content Management KW - XML KW - Koran KW - Knowledge representation KW - Meta-model KW - Frames KW - XML model KW - Knowledge Management KW - Content Management KW - Quran Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-65737 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Design and Implementation of Architectures for Interactive Textual Documents Collation Systems N2 - One of the main purposes of textual documents collation is to identify a base text or closest witness to the base text, by analyzing and interpreting differences also known as types of changes that might exist between those documents. Based on this fact, it is reasonable to argue that, explicit identification of types of changes such as deletions, additions, transpositions, and mutations should be part of the collation process. The identification could be carried out by an interpretation module after alignment has taken place. Unfortunately existing collation software such as CollateX1 and Juxta2’s collation engine do not have interpretation modules. In fact they implement the Gothenburg model [1] for collation process which does not include an interpretation unit. Currently both CollateX and Juxta’s collation engine do not distinguish in their critical apparatus between the types of changes, and do not offer statistics about those changes. This paper presents a model for both integrated and distributed collation processes that improves the Gothenburg model. The model introduces an interpretation component for computing and distinguishing between the types of changes that documents could have undergone. Moreover two architectures implementing the model in order to solve the problem of interactive collation are discussed as well. Each architecture uses CollateX library, and provides on the one hand preprocessing functions for transforming input documents into CollateX input format, and on the other hand a post-processing module for enabling interactive collation. Finally simple algorithms for distinguishing between types of changes, and linking collated source documents with the collation results are also introduced. KW - Softwarearchitektur KW - Textvergleich KW - service based software architecture KW - service brokerage KW - interactive collation of textual variants KW - Gothenburg model of collation process Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-56601 ER - TY - THES A1 - Schmidt, Marco T1 - Ground Station Networks for Efficient Operation of Distributed Small Satellite Systems T1 - Effizienter Betrieb von Verteilten Kleinsatelliten-Systemen mit Bodenstationsnetzwerken N2 - The field of small satellite formations and constellations attracted growing attention, based on recent advances in small satellite engineering. The utilization of distributed space systems allows the realization of innovative applications and will enable improved temporal and spatial resolution in observation scenarios. On the other side, this new paradigm imposes a variety of research challenges. In this monograph new networking concepts for space missions are presented, using networks of ground stations. The developed approaches combine ground station resources in a coordinated way to achieve more robust and efficient communication links. Within this thesis, the following topics were elaborated to improve the performance in distributed space missions: Appropriate scheduling of contact windows in a distributed ground system is a necessary process to avoid low utilization of ground stations. The theoretical basis for the novel concept of redundant scheduling was elaborated in detail. Additionally to the presented algorithm was a scheduling system implemented, its performance was tested extensively with real world scheduling problems. In the scope of data management, a system was developed which autonomously synchronizes data frames in ground station networks and uses this information to detect and correct transmission errors. The system was validated with hardware in the loop experiments, demonstrating the benefits of the developed approach. N2 - Satellitenformationen und Konstellationen rücken immer mehr in den Fokus aktueller Forschung, ausgelöst durch die jüngsten Fortschritte in der Kleinsatelliten-Entwicklung. Der Einsatz von verteilten Weltraumsystemen ermöglicht die Realisierung von innovativen Anwendungen auf Basis von hoher zeitlicher und räumlicher Auflösung in Observationsszenarien. Allerdings bringt dieses neue Paradigma der Raumfahrttechnik auch Herausforderungen in verschiedenen Forschungsfeldern mit sich. In dieser Dissertation werden neue Netzwerk-Konzepte für Raumfahrtmissionen unter Einsatz von Bodenstationnetzwerken vorgestellt. Die präsentierten Verfahren koordinieren verfügbare Bodenstationsressourcen um einen robusten und effizienten Kommunikationslink zu ermöglichen. In dieser Arbeit werden dabei folgende Themenfelder behandelt um die Performance in verteilten Raumfahrtmissionen zu steigern: Das Verteilen von Kontaktfenster (sogenanntes Scheduling) in verteilten Bodenstationssystem ist ein notwendiger Prozess um eine niedrige Auslastung der Stationen zu vermeiden. Die theoretische Grundlage für das Konzept des redundanten Scheduling wurde erarbeitet. Zusätztlich wurde das Verfahren in Form eines Scheduling Systems implementiert und dessen Performance ausführlich an real-world Szenarien getestet. Im Rahmen des Themenfeldes Data Management wurde ein System entwickelt, welches autonom Datenframes in Bodenstationsnetzwerken synchronisieren kann. Die in den Datenframes enthaltene Information wird genutzt um Übertragungsfehler zu erkennen und zu korrigieren. Das System wurde mit Hardware-in-the-loop Experimenten validiert und die Vorteile des entwickelten Verfahrens wurden gezeigt. T3 - Forschungsberichte in der Robotik = Research Notes in Robotics - 6 KW - Kleinsatellit KW - Bodenstation KW - Verteiltes System KW - Scheduling KW - Ground Station Networks KW - Small Satellites KW - Distributed Space Systems Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-64999 SN - 978-3-923959-77-8 ER - TY - THES A1 - Selbach, Stefan T1 - Hybride bitparallele Volltextsuche T1 - Hybrid Bit-parallel Full-text Search N2 - Der große Vorteil eines q-Gramm Indexes liegt darin, dass es möglich ist beliebige Zeichenketten in einer Dokumentensammlung zu suchen. Ein Nachteil jedoch liegt darin, dass bei größer werdenden Datenmengen dieser Index dazu neigt, sehr groß zu werden, was mit einem deutlichem Leistungsabfall verbunden ist. In dieser Arbeit wird eine neuartige Technik vorgestellt, die die Leistung eines q-Gramm Indexes mithilfe zusätzlicher M-Matrizen für jedes q-Gramm und durch die Kombination mit einem invertierten Index erhöht. Eine M-Matrix ist eine Bit-Matrix, die Informationen über die Positionen eines q-Gramms enthält. Auch bei der Kombination von zwei oder mehreren Q-Grammen bieten diese M-Matrizen Informationen über die Positionen der Kombination. Dies kann verwendet werden, um die Komplexität der Zusammenführung der q-Gramm Trefferlisten für eine gegebene Suchanfrage zu reduzieren und verbessert die Leistung des n-Gramm-invertierten Index. Die Kombination mit einem termbasierten invertierten Index beschleunigt die durchschnittliche Suchzeit zusätzlich und vereint die Vorteile beider Index-Formate. Redundante Informationen werden in dem q-Gramm Index reduziert und weitere Funktionalität hinzugefügt, wie z.B. die Bewertung von Treffern nach Relevanz, die Möglichkeit, nach Konzepten zu suchen oder Indexpartitionierungen nach Wichtigkeit der enthaltenen Terme zu erstellen. N2 - The major advantage of the n-gram inverted index is the possibility to locate any given substring in a document collection. Nevertheless, the n-gram inverted index also has its drawbacks: If the collections are getting bigger, this index tends to be very large and the performance drops significantly. A novel technique is proposed to enhance the performance of an n-gram inverted index by using additional m-matrixes for each n-gram and by combining it with an inverted index. An m-matrix is a bit matrix containing information about the positions of an n-gram. When combining two or more n-grams, these m-matrixes provide information about the positions of the combination. This can be used to reduce the complexity of merging the n-gram postings lists for a given search and improves the performance of the n-gram inverted index. The combination with a term based inverted index speeds up the average search time even more and combines the benefits of both index formats. Redundant information is reduced in the n-gram index and further functionality is added like the ranking of hits, the possibility to search for concepts and to create index partitions according to the relevance of the contained terms. KW - Information Retrieval KW - Information-Retrieval-System KW - Suchverfahren KW - Invertierte Liste KW - n-Gramm KW - q-Gramm KW - Volltextsuche KW - Bit Parallelität KW - Konzeptsuche KW - q-gram KW - n-gram KW - bit-parallel KW - full-text search KW - concept search Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-66476 ER - TY - JOUR A1 - Buchheim, Mark A. A1 - Keller, Alexander A1 - Koetschan, Christian A1 - Förster, Frank A1 - Merget, Benjamin A1 - Wolf, Matthias T1 - Internal Transcribed Spacer 2 (nu ITS2 rRNA) Sequence-Structure Phylogenetics: Towards an Automated Reconstruction of the Green Algal Tree of Life JF - PLoS ONE N2 - Background: Chloroplast-encoded genes (matK and rbcL) have been formally proposed for use in DNA barcoding efforts targeting embryophytes. Extending such a protocol to chlorophytan green algae, though, is fraught with problems including non homology (matK) and heterogeneity that prevents the creation of a universal PCR toolkit (rbcL). Some have advocated the use of the nuclear-encoded, internal transcribed spacer two (ITS2) as an alternative to the traditional chloroplast markers. However, the ITS2 is broadly perceived to be insufficiently conserved or to be confounded by introgression or biparental inheritance patterns, precluding its broad use in phylogenetic reconstruction or as a DNA barcode. A growing body of evidence has shown that simultaneous analysis of nucleotide data with secondary structure information can overcome at least some of the limitations of ITS2. The goal of this investigation was to assess the feasibility of an automated, sequence-structure approach for analysis of IT2 data from a large sampling of phylum Chlorophyta. Methodology/Principal Findings: Sequences and secondary structures from 591 chlorophycean, 741 trebouxiophycean and 938 ulvophycean algae, all obtained from the ITS2 Database, were aligned using a sequence structure-specific scoring matrix. Phylogenetic relationships were reconstructed by Profile Neighbor-Joining coupled with a sequence structure-specific, general time reversible substitution model. Results from analyses of the ITS2 data were robust at multiple nodes and showed considerable congruence with results from published phylogenetic analyses. Conclusions/Significance: Our observations on the power of automated, sequence-structure analyses of ITS2 to reconstruct phylum-level phylogenies of the green algae validate this approach to assessing diversity for large sets of chlorophytan taxa. Moreover, our results indicate that objections to the use of ITS2 for DNA barcoding should be weighed against the utility of an automated, data analysis approach with demonstrated power to reconstruct evolutionary patterns for highly divergent lineages. KW - RBCL Gene-sequences KW - Colonial volvocales chlorophyta KW - 26S RDNA Data KW - Land plants KW - Molecular systematics KW - Secondary structure KW - Nuclear RDNA KW - DNA KW - Barcodes KW - Dasycladales chlorophyta KW - Profile distances Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-140866 VL - 6 IS - 2 ER - TY - THES A1 - Staehle, Barbara T1 - Modeling and Optimization Methods for Wireless Sensor and Mesh Networks T1 - Modellierungs- und Optimierungs-Methoden für drahtlose Sensor- und Mesh-Netze N2 - Im Internet der Zukunft werden Menschen nicht nur mit Menschen, sondern auch mit „Dingen“, und sogar „Dinge“ mit „Dingen“ kommunizieren. Zusätzlich wird das Bedürfnis steigen, immer und überall Zugang zum Internet zu haben. Folglich gewinnen drahtlose Sensornetze (WSNs) und drahtlose Mesh-Netze (WMNs) an Bedeutung, da sie Daten über die Umwelt ins Internet liefern, beziehungsweise einfache Internet-Zugangsmöglichkeiten schaffen. In den vier Teilen dieser Arbeit werden unterschiedliche Modellierungs- und Optimierungsmethoden für WSNs und WMNs vorgestellt. Der Energieverbrauch ist die wichtigste Metrik, wenn es darum geht die Kommunikation in einem WSN zu optimieren. Da sich in der Literatur sehr viele unterschiedliche Energiemodelle finden, untersucht der erste Teil der Arbeit welchen Einfluss unterschiedliche Energiemodelle auf die Optimierung von WSNs haben. Aufbauend auf diesen Überlegungen beschäftigt sich der zweite Teil der Arbeit mit drei Problemen, die überwunden werden müssen um eine standardisierte energieeffiziente Kommunikations-Lösung für WSNs basierend auf IEEE 802.15.4 und ZigBee zu realisieren. Für WMNs sind beide Probleme von geringem Interesse, die Leistung des Netzes jedoch umso mehr. Der dritte Teil der Arbeit führt daher Algorithmen für die Berechnung des Max-Min fairen (MMF) Netzwerk-Durchsatzes in WMNs mit mehreren Linkraten und Internet-Gateways ein. Der letzte Teil der Arbeit untersucht die Auswirkungen des LRA-Konzeptes. Dessen grundlegende Idee ist die folgende. Falls für einen Link eine niedrigere Datenrate als theoretisch möglich verwendet wird, sinkt zwar der Link-Durchsatz, jedoch ist unter Umständen eine größere Anzahl von gleichzeitigen Übertragungen möglich und der Gesamt-Durchsatz des Netzes kann sich erhöhen. Mithilfe einer analytischen LRA Formulierung und einer systematischen Studie kann gezeigt werden, dass eine netzwerkweite Zuordnung robusterer Datenraten als nötig zu einer Erhöhung des MMF Netzwerk-Durchsatzes führt. Desweitern kann gezeigt werden, dass sich LRA positiv auf die Leistungsfähigkeit eines IEEE 802.11 WMNs auswirkt und für die Optimierung des Netzes genutzt werden kann. N2 - In the future Internet, the people-centric communication paradigm will be complemented by a ubiquitous communication among people and devices, or even a communication between devices. This comes along with the need for a more flexible, cheap, widely available Internet access. Two types of wireless networks are considered most appropriate for attaining those goals. While wireless sensor networks (WSNs) enhance the Internet’s reach by providing data about the properties of the environment, wireless mesh networks (WMNs) extend the Internet access possibilities beyond the wired backbone. This monograph contains four chapters which present modeling and optimization methods for WSNs and WMNs. Minimizing energy consumptions is the most important goal of WSN optimization and the literature consequently provides countless energy consumption models. The first part of the monograph studies to what extent the used energy consumption model influences the outcome of analytical WSN optimizations. These considerations enable the second contribution, namely overcoming the problems on the way to a standardized energy-efficient WSN communication stack based on IEEE 802.15.4 and ZigBee. For WMNs both problems are of minor interest whereas the network performance has a higher weight. The third part of the work, therefore, presents algorithms for calculating the max-min fair network throughput in WMNs with multiple link rates and Internet gateway. The last contribution of the monograph investigates the impact of the LRA concept which proposes to systematically assign more robust link rates than actually necessary, thereby allowing to exploit the trade-off between spatial reuse and per-link throughput. A systematical study shows that a network-wide slightly more conservative LRA than necessary increases the throughput of a WMN where max-min fairness is guaranteed. It moreover turns out that LRA is suitable for increasing the performance of a contention-based WMN and is a valuable optimization tool. T3 - Würzburger Beiträge zur Leistungsbewertung Verteilter Systeme - 01/11 KW - Drahtloses Sensorsystem KW - Drahtloses vermaschtes Netz KW - Modellierung KW - Optimierung KW - IEEE 802.11 KW - IEEE 802.15.4 KW - Energieeffizienz KW - Fairness KW - Linkratenanpassung KW - Energy efficiency KW - Fairness KW - Link rate adaptation Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-64884 ER - TY - THES A1 - Reitwießner, Christian T1 - Multiobjective Optimization and Language Equations T1 - Mehrkriterielle Optimierung und Sprachgleichungen N2 - Praktische Optimierungsprobleme beinhalten oft mehrere gleichberechtigte, sich jedoch widersprechende Kriterien. Beispielsweise will man bei einer Reise zugleich möglichst schnell ankommen, sie soll aber auch nicht zu teuer sein. Im ersten Teil dieser Arbeit wird die algorithmische Beherrschbarkeit solcher mehrkriterieller Optimierungsprobleme behandelt. Es werden zunächst verschiedene Lösungsbegriffe diskutiert und auf ihre Schwierigkeit hin verglichen. Interessanterweise stellt sich heraus, dass diese Begriffe für ein einkriterielles Problem stets gleich schwer sind, sie sich ab zwei Kriterien allerdings stark unterscheiden könen (außer es gilt P = NP). In diesem Zusammenhang wird auch die Beziehung zwischen Such- und Entscheidungsproblemen im Allgemeinen untersucht. Schließlich werden neue und verbesserte Approximationsalgorithmen für verschieden Varianten des Problems des Handlungsreisenden gefunden. Dabei wird mit Mitteln der Diskrepanztheorie eine Technik entwickelt, die ein grundlegendes Hindernis der Mehrkriteriellen Optimierung aus dem Weg schafft: Gegebene Lösungen so zu kombinieren, dass die neue Lösung in allen Kriterien möglichst ausgewogen ist und gleichzeitig die Struktur der Lösungen nicht zu stark zerstört wird. Der zweite Teil der Arbeit widmet sich verschiedenen Aspekten von Gleichungssystemen für (formale) Sprachen. Einerseits werden konjunktive und Boolesche Grammatiken untersucht. Diese sind Erweiterungen der kontextfreien Grammatiken um explizite Durchschnitts- und Komplementoperationen. Es wird unter anderem gezeigt, dass man bei konjunktiven Grammatiken die Vereinigungsoperation stark einschränken kann, ohne dabei die erzeugte Sprache zu ändern. Außerdem werden bestimmte Schaltkreise untersucht, deren Gatter keine Wahrheitswerte sondern Mengen von Zahlen berechnen. Für diese Schaltkreise wird das Äquivalenzproblem betrachtet, also die Frage ob zwei gegebene Schaltkreise die gleiche Menge berechnen oder nicht. Es stellt sich heraus, dass, abhängig von den erlaubten Gattertypen, die Komplexität des Äquivalenzproblems stark variiert und für verschiedene Komplexitätsklassen vollständig ist, also als (parametrisierter) Vertreter für diese Klassen stehen kann. N2 - Practical optimization problems often comprise several incomparable and conflicting objectives. When booking a trip using several means of transport, for instance, it should be fast and at the same time not too expensive. The first part of this thesis is concerned with the algorithmic solvability of such multiobjective optimization problems. Several solution notions are discussed and compared with respect to their difficulty. Interestingly, these solution notions are always equally difficulty for a single-objective problem and they differ considerably already for two objectives (unless P = NP). In this context, the difference between search and decision problems is also investigated in general. Furthermore, new and improved approximation algorithms for several variants of the traveling salesperson problem are presented. Using tools from discrepancy theory, a general technique is developed that helps to avoid an obstacle that is often hindering in multiobjective approximation: The problem of combining two solutions such that the new solution is balanced in all objectives and also mostly retains the structure of the original solutions. The second part of this thesis is dedicated to several aspects of systems of equations for (formal) languages. Firstly, conjunctive and Boolean grammars are studied, which are extensions of context-free grammars by explicit intersection and complementation operations, respectively. Among other results, it is shown that one can considerably restrict the union operation on conjunctive grammars without changing the generated language. Secondly, certain circuits are investigated whose gates do not compute Boolean values but sets of natural numbers. For these circuits, the equivalence problem is studied, i.\,e.\ the problem of deciding whether two given circuits compute the same set or not. It is shown that, depending on the allowed types of gates, this problem is complete for several different complexity classes and can thus be seen as a parametrized) representative for all those classes. KW - Mehrkriterielle Optimierung KW - Approximationsalgorithmus KW - Travelling-salesman-Problem KW - Boolesche Grammatik KW - Theoretische Informatik KW - Komplexitätstheorie KW - Boolean Grammar Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-70146 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Philosophical and Computational Approaches for Estimating and Visualizing Months of Revelations of Quranic Chapters N2 - The question of why the Quran structure does not follow its chronology of revelation is a recurring one. Some Islamic scholars such as [1] have answered the question using hadiths, as well as other philosophical reasons based on internal evidences of the Quran itself. Unfortunately till today many are still wondering about this issue. Muslims believe that the Quran is a summary and a copy of the content of a preserved tablet called Lawhul-Mahfuz located in the heaven. Logically speaking, this suggests that the arrangement of the verses and chapters is expected to be similar to that of the Lawhul-Mahfuz. As for the arrangement of the verses in each chapter, there is unanimity that it was carried out by the Prophet himself under the guidance of Angel Gabriel with the recommendation of God. But concerning the ordering of the chapters, there are reports about some divergences [3] among the Prophet’s companions as to which chapter should precede which one. This paper argues that Quranic chapters might have been arranged according to months and seasons of revelation. In fact, based on some verses of the Quran, it is defendable that the Lawhul-Mahfuz itself is understood to have been structured in terms of the months of the year. In this study, philosophical and mathematical arguments for computing chapters’ months of revelation are discussed, and the result is displayed on an interactive scatter plot. KW - Text Mining KW - Visualisierung KW - Koran KW - Text mining KW - Visualization KW - Chronology of revelation KW - Chapters arrangement KW - Quran KW - Lawhul-Mahfuz Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-65784 ER - TY - THES A1 - Schlosser, Daniel T1 - Quality of Experience Management in Virtual Future Networks T1 - Netzwerkmanagement unter Berücksichtigung der vom Benutzer erfahrenen Dienstgüte in virtuellen zukünftigen Netzen N2 - Aktuell beobachten wir eine drastische Vervielfältigung der Dienste und Anwendungen, die das Internet für den Datentransport nutzen. Dabei unterscheiden sich die Anforderungen dieser Dienste an das Netzwerk deutlich. Das Netzwerkmanagement wird durch diese Diversität der nutzenden Dienste aber deutlich erschwert, da es einem Datentransportdienstleister kaum möglich ist, die unterschiedlichen Verbindungen zu unterscheiden, ohne den Inhalt der transportierten Daten zu analysieren. Netzwerkvirtualisierung ist eine vielversprechende Lösung für dieses Problem, da sie es ermöglicht für verschiedene Dienste unterschiedliche virtuelle Netze auf dem gleichen physikalischen Substrat zu betreiben. Diese Diensttrennung ermöglicht es, jedes einzelne Netz anwendungsspezifisch zu steuern. Ziel einer solchen Netzsteuerung ist es, sowohl die vom Nutzer erfahrene Dienstgüte als auch die Kosteneffizienz des Datentransports zu optimieren. Darüber hinaus wird es mit Netzwerkvirtualisierung möglich das physikalische Netz so weit zu abstrahieren, dass die aktuell fest verzahnten Rollen von Netzwerkbesitzer und Netzwerkbetreiber entkoppelt werden können. Darüber hinaus stellt Netzwerkvirtualisierung sicher, dass unterschiedliche Datennetze, die gleichzeitig auf dem gleichen physikalischen Netz betrieben werden, sich gegenseitig weder beeinflussen noch stören können. Diese Arbeit  beschäftigt sich mit ausgewählten Aspekten dieses Themenkomplexes und fokussiert sich darauf, ein virtuelles Netzwerk mit bestmöglicher Dienstqualität für den Nutzer zu betreiben und zu steuern. Dafür wird ein Top-down-Ansatz gewählt, der von den Anwendungsfällen, einer möglichen Netzwerkvirtualisierungs-Architektur und aktuellen Möglichkeiten der Hardwarevirtualisierung ausgeht. Im Weiteren fokussiert sich die Arbeit dann in Richtung Bestimmung und Optimierung der vom Nutzer erfahrenen Dienstqualität (QoE) auf Applikationsschicht und diskutiert Möglichkeiten zur Messung und Überwachung von wesentlichen Netzparametern in virtualisierten Netzen. N2 - Currently, we observe a strong growth of services and applications, which use the Internet for data transport. However, the network requirements of these applications differ significantly. This makes network management difficult, since it complicated to separate network flows into application classes without inspecting application layer data. Network virtualization is a promising solution to this problem. It enables running different virtual network on the same physical substrate. Separating networks based on the service supported within allows controlling each network according to the specific needs of the application. The aim of such a network control is to optimize the user perceived quality as well as the cost efficiency of the data transport. Furthermore, network virtualization abstracts the network functionality from the underlying implementation and facilitates the split of the currently tightly integrated roles of Internet Service Provider and network owner. Additionally, network virtualization guarantees that different virtual networks run on the same physical substrate do not interfere with each other. This thesis discusses different aspects of the network virtualization topic. It is focused on how to manage and control a virtual network to guarantee the best Quality of Experience for the user. Therefore, a top-down approach is chosen. Starting with use cases of virtual networks, a possible architecture is derived and current implementation options based on hardware virtualization are explored. In the following, this thesis focuses on assessing the Quality of Experience perceived by the user and how it can be optimized on application layer. Furthermore, options for measuring and monitoring significant network parameters of virtual networks are considered. T3 - Würzburger Beiträge zur Leistungsbewertung Verteilter Systeme - 01/12 KW - Netzwerkmanagement KW - Dienstgüte KW - Netzwerkvirtualisierung KW - QoS KW - QoE KW - Network Virtualization KW - Quality of Experience KW - Network Management KW - Quality of Service Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-69986 ER - TY - INPR A1 - Nassourou, Mohamadou T1 - Using Machine Learning Algorithms for Categorizing Quranic Chaptersby Major Phases of Prophet Mohammad’s Messengership N2 - This paper discusses the categorization of Quranic chapters by major phases of Prophet Mohammad’s messengership using machine learning algorithms. First, the chapters were categorized by places of revelation using Support Vector Machine and naïve Bayesian classifiers separately, and their results were compared to each other, as well as to the existing traditional Islamic and western orientalists classifications. The chapters were categorized into Meccan (revealed in Mecca) and Medinan (revealed in Medina). After that, chapters of each category were clustered using a kind of fuzzy-single linkage clustering approach, in order to correspond to the major phases of Prophet Mohammad’s life. The major phases of the Prophet’s life were manually derived from the Quranic text, as well as from the secondary Islamic literature e.g hadiths, exegesis. Previous studies on computing the places of revelation of Quranic chapters relied heavily on features extracted from existing background knowledge of the chapters. For instance, it is known that Meccan chapters contain mostly verses about faith and related problems, while Medinan ones encompass verses dealing with social issues, battles…etc. These features are by themselves insufficient as a basis for assigning the chapters to their respective places of revelation. In fact, there are exceptions, since some chapters do contain both Meccan and Medinan features. In this study, features of each category were automatically created from very few chapters, whose places of revelation have been determined through identification of historical facts and events such as battles, migration to Medina…etc. Chapters having unanimously agreed places of revelation were used as the initial training set, while the remaining chapters formed the testing set. The classification process was made recursive by regularly augmenting the training set with correctly classified chapters, in order to classify the whole testing set. Each chapter was preprocessed by removing unimportant words, stemming, and representation with vector space model. The result of this study shows that, the two classifiers have produced useable results, with an outperformance of the support vector machine classifier. This study indicates that, the proposed methodology yields encouraging results for arranging Quranic chapters by phases of Prophet Mohammad’s messengership. KW - Koran KW - Maschinelles Lernen KW - Text categorization KW - Clustering KW - Support Vector Machine KW - Naïve Bayesian KW - Place of revelation KW - Stages of Prophet Mohammad’s messengership KW - Quran Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-66862 ER -