Mining Genomes of Three Marine Sponge-Associated Actinobacterial Isolates for Secondary Metabolism

Please always quote using this URN: urn:nbn:de:bvb:20-opus-124887
  • Here, we report the draft genome sequences of three actinobacterial isolates, Micromonospora sp. RV43, Rubrobacter sp. RV113, and Nocardiopsis sp. RV163 that had previously been isolated from Mediterranean sponges. The draft genomes were analyzed for the presence of gene clusters indicative of secondary metabolism using antiSMASH 3.0 and NapDos pipelines. Our findings demonstrated the chemical richness of sponge-associated actinomycetes and the efficacy of genome mining in exploring the genomic potential of sponge-derived actinomycetes.

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Author: Hannes Horn, Ute Hentschel, Usama Ramadan Abdelmohsen
Document Type:Journal article
Faculties:Fakultät für Biologie / Julius-von-Sachs-Institut für Biowissenschaften
Parent Title (English):Genome Announcements
Year of Completion:2015
Source:Genome Announcements 3(5):e01106-15. doi:10.1128/genomeA.01106-15
Dewey Decimal Classification:5 Naturwissenschaften und Mathematik / 59 Tiere (Zoologie) / 593 Wirbellose des Meeres und der Meeresküste
Release Date:2016/01/26
Collections:Open-Access-Publikationsfonds / Förderzeitraum 2015
Licence (German):License LogoCC BY: Creative-Commons-Lizenz: Namensnennung