@phdthesis{Mueller2017,
  author    = {M{\"u}ller, Nadine},
  title     = {Nachweis von zirkulierenden Tumorzellen (CTC) in ven{\"o}sem Vollblut von Patienten mit gastrointestinalen Tumoren : Untersuchungen in vitro},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-152546},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Zirkulierende Tumorzellen (CTCs) sind maligne Zellen, die in sehr geringer Anzahl im peripheren Blut von Tumorpatienten zu finden sind. Sie k{\"o}nnen entweder vom Prim{\"a}r-tumor oder von Metastasen in sekund{\"a}ren Organen stammen und sind in der Lage, sich nach dem Verlassen der Blutbahn in verschiedenen Geweben anzusiedeln und neue Me-tastasen auszubilden. Der Nachweis dieser CTCs im Blut ist mittlerweile zu einem viel-versprechenden und viel beforschtem Gebiet der Onkologie geworden. Das Vorhanden-sein von CTCs im Blut von Tumorpatienten kann ein fr{\"u}her Indikator f{\"u}r eine Metasta-sierung sein, als zuverl{\"a}ssiger Vorhersageparameter f{\"u}r die Prognose dienen und die Effektivit{\"a}t einer Therapie aufzeigen. In der vorliegenden Arbeit wurde ein immunologisches Verfahren entwickelt, womit CTCs in ven{\"o}sem Vollblut schnell und einfach als EpCAM-und Zytokeratin-positive und CD45-negative Zellen nachgewiesen werden k{\"o}nnen. Dabei erfolgt nach einer Ly-se der Erythrozyten in der Probe eine Leukozytendepletion mittels MACS (magnetic-activated cell sorting) und die Identifikation der Tumorzellen mittels FACS-Analyse mit einer festgelegten Gatingstrategie. Mit diesem Verfahren wurden Blutproben von 42 Patienten mit metastasierten gastrointestinalen Tumoren und von 10 gesunden Normal-spendern auf die Anzahl von CTCs/3,75ml Blut untersucht. Dabei wiesen die Patienten ann{\"a}hernd signifikant (p=0,076) mehr CTCs auf als die Normalspender. In 43\% der F{\"a}l-le hatten die Patienten >2 CTCs/3,75ml Vollblut und galten damit als CTC-positiv. Pati-enten mit Kolorektalem Karzinom zeigten mit 71\% den h{\"o}chsten Anteil an CTC-Positivit{\"a}t. Bei den gesunden Normalspendern ließen sich in keinem Fall >2 CTCs nachweisen. Nach einer Evaluation dieser Methode in einer weiteren Studie mit einem gr{\"o}ßeren Pati-enten- und Vergleichskollektiv k{\"o}nnte eine h{\"o}here Beweisebene erreicht werden, die den Einsatz in der klinischen Routine erm{\"o}glicht. Daneben sind eine weitere Optimie-rung des FACS-Verfahrens und eine Erweiterung des Antigenspektrums bei der CTC-Detektion zur Erh{\"o}hung der Sensitivit{\"a}t und Spezifit{\"a}t erforderlich. Patienten w{\"u}rden von diesem einfachen und wenig invasivem CTC-Detektionsverfahren vor allem im Hinblick auf eine Individualisierung der Therapie und auf das Vermeiden einer {\"U}berthe-rapie deutlich profitieren.},
  language  = {de}
}
@phdthesis{Reeg2017,
  author    = {Reeg, Johannes},
  title     = {Empirical Studies of Contemporaneous Banking Research},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-153581},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Banks perform important functions for the economy. Besides financial intermediation, banks provide information, liquidity, maturity- and risk-transformation (Fama, 1985). Banks ensure the transfer of liquidity from depositors to the most profitable investment projects. In addition, they perform important screening and monitoring services over investments hence contributing steadily to the efficient allocation of resources across the economy (Pathan and Faff, 2013). Since banks provide financial services all across the economy, this exposes banks (as opposed to non-banks) to systemic risk: the recent financial crisis revealed that banks can push economies into severe recessions. However, the crisis also revealed that certain bank types appear far more stable than others. For instance, cooperative banks performed better during the crisis than commercial banks. Different business models may reason these performance-differences: cooperative banks focus on relationship lending across their region, hence these banks suffered less from the collapse of the US housing market. Since cooperative banks performed better during the crisis than commercial banks, it is quite surprising that research concerning cooperative banks is highly underrepresented in the literature. For this reason, the following three studies aim to contribute to current literature by examining three independent contemporaneous research questions in the context of cooperative banks. Chapter 2 examines whether cooperative banks benefit from revenue diversification: Current banking literature reveals the recent trend in the overall banking industry that banks may opt for diversification by shifting their revenues to non-interest income. However, existing literature also shows that not every bank benefits from revenue diversification (Mercieca et al., 2007; Stiroh and Rumble, 2006; Goddard et al., 2008). Stiroh and Rumble (2006) find that large commercial banks (US Financial Holding Companies) perceive decreasing performance by shifting revenues towards non-interest income. Revenues from cooperative banks differ from those of commercial banks: commercial banks trade securities and derivatives, sell investment certificates and other trading assets. Concerning the lending business, commercial banks focus on providing loans for medium-sized and large companies rather than for small (private) customers. Cooperative banks rely on commission income (fees) from monetary transactions and selling insurances as a source of non-interest income. They generate most of their interest income by providing loans to small and medium-sized companies as well as to private customers in the region. These differences in revenues raise the question whether findings from Stiroh and Rumble (2006) apply to cooperative banks. For this reason, Chapter 2 evaluates a sample of German cooperative banks over the period 2005 to 2010 and aims to investigate the following research question: which cooperative banks benefit from revenue diversification? Results show that findings from Stiroh and Rumble (2006) do not apply to cooperative banks. Revenue concentration is positive related to risk-adjusted returns (indirect effect) for cooperative banks. At the same time, non-interest income is more profitable than interest income (direct effect). The evaluation of the underlying non-interest income share shows that banks who heavily focus on non-interest income benefit by shifting towards non-interest income. This finding arises due to the fact, that the positive direct effect dominates the negative indirect effect, leading in a positive (and significant) net effect. Furthermore, results reveal a negative net effect for banks who are heavily exposed to interest generating activities. This indicates that shifting to non-interest income decreases risk-adjusted returns for these banks. Consequently, these banks do better by focusing on the interest business. Overall, results show evidence that banks need time to build capabilities, expertise and experience before trading off return and risk efficiently with regard on revenue diversification. Chapter 3 deals with the relation between credit risk, liquidity risk, capital risk and bank efficiency: There has been rising competition in the European banking market due to technological development, deregulation and the introduction of the Euro as a common currency in recent decades. In order to remain competitive banks were forced to improve efficiency. That is, banks try to operate closer to a "best practice" production function in the sense that banks improve the input - output relation. The key question in this context is if banks improve efficiency at a cost of higher risk to compensate decreasing earnings. When it comes to bank risk, a large strand of literature discusses the issue of problem loans. Several studies identify that banks hold large shares of non-performing loans in their portfolio before becoming bankrupt (Barr and Siems, 1994; Demirg{\"u}c-Kunt, 1989). According to efficiency, studies show that the average bank generates low profits and incorporates high costs compared to the "best practice" production frontier (Fiordelisi et al., 2011; Williams, 2004). At first glance, these two issues do not seem related. However, Berger and DeYoung (1997) show that banks with poor management are less able to handle their costs (low cost-efficiency) as well as to monitor their debtors in an appropriate manner to ensure loan quality. The negative relationship between cost efficiency and non-performing loans leads to declining capital. Existing studies (e.g. Williams, 2004; Berger and DeYoung, 1997) show that banks with a low level of capital tend to engage in moral hazard behavior, which in turn can push these banks into bankruptcy. However, the business model of cooperative banks is based on the interests of its commonly local customers (the cooperative act: \S 1 GenG). This may imply that the common perception of banks engaging in moral hazard behavior may not apply to cooperative banks. Since short-term shareholder interests (as a potential factor for moral hazard behavior) play no role for cooperative banks this may support this notion. Furthermore, liquidity has been widely neglected in the existing literature, since the common perception has been that access to additional liquid funds is not an issue. However, the recent financial crisis revealed that liquidity dried up for many banks due to increased mistrust in the banking sector. Besides investigating moral hazard behavior, using data from 2005 to 2010 this study moves beyond current literature by employing a measure for liquidity risk in order to evaluate how liquidity risk relates to efficiency and capital. Results mostly apply to current literature in this field since the empirical evaluation reveals that lower cost and profit-efficiency Granger-cause increases in credit risk. At the same time, results indicate that credit risk negatively Granger-causes cost and profit-efficiency, hence revealing a bi-directional relationship between these measures. However, most importantly, results also show a positive relationship between capital and credit risk, thus displaying that moral hazard behavior does not apply to cooperative banks. Especially the business model of cooperative banks, which is based on the interests of its commonly local customers (the cooperative act: \S 1 GenG) may reason this finding. Contrary to Fiordelisi et al. (2011), results also show a negative relationship between capital and cost-efficiency, indicating that struggling cooperative banks focus on managing their cost-exposure in following periods. Concerning the employed liquidity risk measure, the authors find that banks who hold a high level of liquidity are less active in market related investments and hold high shares of equity capital. This outcome clearly reflects risk-preferences from the management of a bank. Chapter 4 examines governance structures of cooperative banks: The financial crisis of 2007/08 led to huge distortions in the banking market. The failure of Lehman Brothers was the beginning of government interventions in various countries all over the world in order to prevent domestic economies from even further disruptions. In the aftermath of the crisis, politicians and regulators identified governance deficiencies as one major factor that contributed to the crisis. Besides existing studies in the banking literature (e.g. Beltratti and Stulz, 2012; Diamond and Rajan, 2009; Erkens et al., 2012) an OECD study from 2009 supports this notion (Kirkpatrick, 2009). Public debates increased awareness for the need of appropriate governance mechanisms at that time. Consequently, politicians and regulators called for more financial expertise on bank boards. Accordingly, the Basel Committee on Banking Supervision states in principle 2 that "board members should remain qualified, individually and collectively, for their positions. They should understand their oversight and corporate governance role and be able to exercise sound, objective judgement about the affairs of the bank." (BCBS, 2015). Taking these perceptions into consideration the prevailing question is whether financial experts on bank boards do really foster bank stability? This chapter aims to investigate this question by referring to the study from Minton et al. (2014). In their study, the authors investigate US commercial bank holding companies between the period 2003 and 2008. The authors find that financial experts on the board of US commercial bank holding companies promote pro-cyclical bank performance. Accordingly, the authors question regulators view of more financial experts on the board leading to more banking stability. However, Minton et al. (2014) do not examine whether their findings accrue due to financial experts who act in the interests of shareholders or due to the issue that financial experts may have a more risk-taking attitude (due to a better understanding of financial instruments) than other board members. Supposed that their findings accrue due to financial experts who act in the interests of shareholders. Then financial experts on the board of banks where short-term shareholder interests play no role (cooperative banks) may prove beneficial with regard on bank performance during the crisis as well as in normal times. This would mean that they use their skills and expertise to contribute sustainable growth to the bank. Contrary, if this study reveals pro-cyclical bank performance related to financial experts on the board of cooperative banks, this finding may be addressed solely to the risk-taking attitude of financial experts (since short-term shareholder interests play no role). For this reason, this chapter aims to identify the channel for the relation of financial experts and bank performance by examining the following research question: Do financial experts on the board promote pro-cyclical bank performance in a setting where short-term shareholder interests play no role? Results show that financial experts on the board of cooperative banks (data from 2006 to 2011) do not promote pro-cyclical bank performance. Contrary, results show evidence that financial experts on the board of cooperative banks appear to foster long-term bank stability. This suggests that regulators should consider ownership structure (and hence business model of banks) when imposing new regulatory constraints for financial experts on the bank board.},
  language  = {en}
}
@phdthesis{Schmid2017,
  author    = {Schmid, Sophie Petra},
  title     = {katheterassoziierte Thrombosen bei p{\"a}diatrischen Patienten mit maligner Erkrankung - eine retrospektive Studie {\"u}ber f{\"u}nf Jahre},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-149395},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Background: Reliable central venous access (CVC) is essential for hematology-oncology patients since frequent puncture of peripheral veins—e.g., for chemotherapy, antibiotic administration, repeated blood sampling, and monitoring—can cause unacceptable pain and psychological trauma, as well as severe side effects in cases of extravasation of chemotherapy drugs. However, CVC lines still carry major risk factors, including thrombosis, infection (e.g., entry site, tunnel, and luminal infections), and catheter dislocation, leakage, or breakage. Methods: Here we performed a retrospective database analysis to determine the incidence of CVC-associated thrombosis in a single-center cohort of 448 pediatric oncologic patients, and to analyze whether any subgroup of patients was at increased risk and thus might benefit from prophylactic anticoagulation. Results: Of the 448 patients, 269 consecutive patients received a CVC, and 55 of these 269 patients (20\%) also had a thrombosis. Of these 55 patients, 43 had at least one CVC-associated thrombosis (total number of CVC-associated thrombosis: n = 52). Among all patients, the median duration of CVC exposure was 464 days. Regarding exposure time, no significant difference was found between patients with and without CVC-associated thrombosis. Subclavia catheters and advanced tumor stages seem to be the main risk factors for the development of CVC-associated thrombosis, whereas pharmacologic prophylaxis did not seem to have a relevant impact on the rate of thrombosis. Conclusions: We conclude that pediatric surgeons and oncologists should pay close attention to ensuring optimal and accurate CVC placement, as this appears the most effective tool tom minimize CVC-associated complications.},
  subject      = {zentral ven{\"o}ser Katheter},
  language  = {de}
}
@phdthesis{Nashed2017,
  author    = {Nashed, Alexander},
  title     = {Entwicklung spinnf{\"a}higer Precursorpolymere zur Herstellung nicht-oxidischer Keramikfasern},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-138517},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Ausgehend von chlorhaltigem Oligosilan, erhalten durch Disproportionierung der „Disilan-Fraktion" der M{\"u}ller-Rochow-Synthese, wurde mit verschiedenen Aminen dechloriert bzw. strukturell modifiziert. Die auf diese Weise in das Oligosilan eingef{\"u}hrten Baugruppen wurden spektroskopisch und durch Vergleich mit geeigneten Modellverbindungen identifiziert. Vernetzungsgrad und keramische Ausbeute der erzeugten Materialen wurden bestimmt. Mit Ammoniak oder einwertigen Aminen wie Methylamin werden Produkte erhalten, die sich nicht zu Keramikfasern verarbeiten lassen. Letzteres scheitert daran, dass entweder keine signifikante Molekulargewichtserh{\"o}hung des Oligosilans erreicht wird, oder f{\"u}hrt dazu, dass das Oligomer vergelt und damit in Toluol unl{\"o}slich wird. Durch Umsetzung des Oligosilans mit zweiwertigen Aminen wie EDA oder TMDA als Vernetzungsreagenz gelang es, eine Syntheseroute zu entwickeln, die - anders als bei der am ISC etablierten Route - keinen thermischen Vernetzungsschritt erfordert, d.h. die gesamte Synthese findet bei Temperaturen ≤200 °C statt. Hierbei wird eine kontrollierbare Erh{\"o}hung des Molekulargewichts erreicht. Die Verwendung von TMDA hat gegen{\"u}ber EDA den Vorteil, dass aufgrund des Ausbleibens von Ringbildung ein h{\"o}her vernetztes Polymer erhalten wird. Dar{\"u}ber hinaus wurde gefunden, dass Gr{\"u}nfasern w{\"a}hrend der Pyrolyse durch radikalisch vernetzbare Gruppen (C=C-Doppelbindungen) im Polymer stabilisiert werden k{\"o}nnen. Diese Gruppen lassen sich entweder durch Dechlorierung mit Allylamin oder durch Umsetzung mit Vinyl-Grignard-Reagenzien einf{\"u}hren. Allylamin erwies sich hierbei als geeigneter, da es preiswerter und leichter handhabbar ist und außerdem - im Gegensatz zu Vinyl-Grignard-Reagenzien - eine vollst{\"a}ndige Dechlorierung des Polymers gestattet. Alle Polymere wurden auf ihre Verarbeitbarkeit zu Gr{\"u}n- und anschließend zu Keramikfasern untersucht. Hierbei wurde gefunden, dass die im Hinblick auf die Eigenschaften der resultierenden Keramikfasern g{\"u}nstigste Rezeptur in der Umsetzung eines zuvor mit DMA vollst{\"a}ndig dechlorierten Oligosilans mit 18,2 mol-\% TMDA und 40 mol-\% Allylamin (bezogen auf NMe2-Gruppen) besteht. Die aus diesem Polymer erhaltenen Keramikfasern zeigen die f{\"u}r noch nicht technisch ausgereifte, im Stadium der Entwicklung befindliche Fasern typischen Festigkeiten und entsprechen damit denjenigen, die auf der am ISC bereits etablierten Route erh{\"a}ltlich sind. Dies macht sie zu aussichtsreichen Kandidaten f{\"u}r die weitere Optimierung.},
  subject      = {Keramikfaser},
  language  = {de}
}
@phdthesis{Sharan2017,
  author    = {Sharan, Malvika},
  title     = {Bio-computational identification and characterization of RNA-binding proteins in bacteria},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-153573},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {RNA-binding proteins (RBPs) have been extensively studied in eukaryotes, where they post-transcriptionally regulate many cellular events including RNA transport, translation, and stability. Experimental techniques, such as cross-linking and co-purification followed by either mass spectrometry or RNA sequencing has enabled the identification and characterization of RBPs, their conserved RNA-binding domains (RBDs), and the regulatory roles of these proteins on a genome-wide scale. These developments in quantitative, high-resolution, and high-throughput screening techniques have greatly expanded our understanding of RBPs in human and yeast cells. In contrast, our knowledge of number and potential diversity of RBPs in bacteria is comparatively poor, in part due to the technical challenges associated with existing global screening approaches developed in eukaryotes. Genome- and proteome-wide screening approaches performed in silico may circumvent these technical issues to obtain a broad picture of the RNA interactome of bacteria and identify strong RBP candidates for more detailed experimental study. Here, I report APRICOT ("Analyzing Protein RNA Interaction by Combined Output Technique"), a computational pipeline for the sequence-based identification and characterization of candidate RNA-binding proteins encoded in the genomes of all domains of life using RBDs known from experimental studies. The pipeline identifies functional motifs in protein sequences of an input proteome using position-specific scoring matrices and hidden Markov models of all conserved domains available in the databases and then statistically score them based on a series of sequence-based features. Subsequently, APRICOT identifies putative RBPs and characterizes them according to functionally relevant structural properties. APRICOT performed better than other existing tools for the sequence-based prediction on the known RBP data sets. The applications and adaptability of the software was demonstrated on several large bacterial RBP data sets including the complete proteome of Salmonella Typhimurium strain SL1344. APRICOT reported 1068 Salmonella proteins as RBP candidates, which were subsequently categorized using the RBDs that have been reported in both eukaryotic and bacterial proteins. A set of 131 strong RBP candidates was selected for experimental confirmation and characterization of RNA-binding activity using RNA co-immunoprecipitation followed by high-throughput sequencing (RIP-Seq) experiments. Based on the relative abundance of transcripts across the RIP-Seq libraries, a catalogue of enriched genes was established for each candidate, which shows the RNA-binding potential of 90\% of these proteins. Furthermore, the direct targets of few of these putative RBPs were validated by means of cross-linking and co-immunoprecipitation (CLIP) experiments. This thesis presents the computational pipeline APRICOT for the global screening of protein primary sequences for potential RBPs in bacteria using RBD information from all kingdoms of life. Furthermore, it provides the first bio-computational resource of putative RBPs in Salmonella, which could now be further studied for their biological and regulatory roles. The command line tool and its documentation are available at https://malvikasharan.github.io/APRICOT/.},
  language  = {en}
}
@phdthesis{Meduri2017,
  author    = {Meduri, Rajyalakshmi},
  title     = {Elucidation of an intricate surveillance network for cellular U snRNP homeostasis},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-143173},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Spliceosomal U-rich small ribonucleoprotein particles (U snRNPs) are the major building blocks of the nuclear pre-mRNA splicing machinery. The core composition of U snRNPs includes the name giving U snRNA and a set of seven common (Sm) proteins termed Sm B/B', D1, D2, D3, E, F and G. These Sm proteins are arranged in the form of a toroidal ring on the single stranded conserved sequence element in the snRNA to form the Sm core domain. Even though U snRNPs assemble spontaneously in vitro, their assembly in vivo requires an amazingly large number of trans-acting assembly factors united in the Protein Arginine Methyltransferase 5 (PRMT5) and the Survival Motor Neuron (SMN) complexes. The cytoplasmic assembly pathway of U snRNPs can be divided into the early and the late phase. The early phase is dominated by the assembly chaperone, pICln, a subunit of the PRMT5 complex. This factor binds to Sm proteins and delivers them in a pICln-bound form to the PRMT5 complex. The early assembly phase then segregates into two lines. In one assembly line, a stable hexameric ring intermediate (6S complex) composed of pICln and the five Sm proteins D1, D2, F, E and G, is formed. This intermediate forms at the PRMT5 complex but dissociates from the latter upon completion of its assembly. Within the 6S complex, these Sm proteins are pre-organized into respective spatial positions adopted in the assembled U snRNP. The other assembly line forms a protein trimer composed of pICln, Sm B/B' and D3, which unlike the 6S complex is not released from the PRMT5 complex. As a consequence of their association with pICln, Sm proteins are kinetically trapped and fail to proceed in the assembly pathway. The late phase of the U snRNP formation is dominated by the SMN complex, which resolves this kinetic trap by dissociating pICln from the pre-organized Sm proteins and, subsequently catalyzes the loading of the Sm proteins on the U snRNA. Even though basic principles of U snRNP assembly have been understood in some detail, the question arises as to why cells employ sophisticated assembly machinery for the assembly despite the reaction occurring spontaneously in vitro. A few studies have shown that the system works towards rendering specificity to the assembly reaction. However, Sm proteins in their free form expose hydrophobic surfaces to the cytosolic solvent. Hence, I reasoned that the assembly machinery of snRNPs might also prevent Sm protein aggregation. In this thesis, I describe the work that leads to the discovery of a multi-layered regulatory network for Sm proteins involving post-transcriptional and post-translational surveillance mechanisms. Here, I show that the reduced level of SMN (a key assembly factor of the late phase) leads to the initial tailback of Sm proteins over pICln followed by the transcriptional down regulation of Sm protein encoding mRNAs. In contrast, depletion of pICln, a key factor of the early phase, results in the retention of Sm proteins on the ribosomes followed by their degradation via autophagy. Furthermore, I show that exceeding levels of Sm proteins over pICln caused by overexpression results in aggregation and mis-localization of Sm proteins. Thus, my findings uncover a complex regulatory network that helps to maintain the cellular U snRNP homeostasis by either preventing or clearing the unassembled Sm protein aggregates when they are not faithfully incorporated into the U snRNPs.},
  language  = {en}
}
@phdthesis{Gutermuth2017,
  author    = {Gutermuth, Timo},
  title     = {Identifizierung und Charakterisierung des Signalweges zur Aktivierung von Anionenkan{\"a}len w{\"a}hrend des Pollenschlauchwachstums},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-139232},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Pollenschl{\"a}uche sind ein Modellsystem zur Untersuchung pflanzlicher Wachstumsprozesse. Zellwachstum in Pollenschl{\"a}uchen zeichnet sich durch den gerichteten Transport und Fusion von Vesikeln mit der apikalen Zellmembran des Pollenschlauchs aus. Der Vesikeltransport erfolgt entlang des Pollenschlauchs durch Aktin-Filamente bis an die Organell- und Zytoskelett-freie apikale Zone, wo sich die Vesikel sammeln und in oszillierenden Wachstumssch{\"u}ben mit der apikalen Zellmembran fusionieren (Yang et al., 1998; Zonia et al., 2001, Gu et al., 2005; Chen et al., 2003; Gu et al., 2005; de Graaf et al., 2005; Lee et al., 2008; Cheung et al., 2010; Quin und Yang et al., 2011). Die polaren Wachstumsprozesse des Pollenschlauches sind an ein Ionenflussmuster gekoppelt, welches durch den Einsatz der Vibrating Probe-Technik zeitlich aufgel{\"o}st werden konnten. Es konnte ein zeitversetzter oszillierender Einstrom von Calcium, Kalium und Protonen sowie der zeitgleich mit den Wachstumssch{\"u}ben auftretende oszillierende Ausstrom von Chlorid aus der Pollenschlauchspitze nachgewiesen werden (K{\"u}htreiber und Jaffe et al., 1990; Holdaway-Clarke et al., 1997; Feijo et al., 1999, Messerli et al., 1999, Zonia et al., 2001). Die Inhibierung des Chloridausstroms resultiert in einem sofortigen Wachstumsstopp und verdeutlicht die Notwendigkeit des Anionenausstroms f{\"u}r das polare Zellwachstum in Pollenschl{\"a}uchen (Breygina et al., 2009). Durch die in dieser Arbeit durchgef{\"u}hrten Experimente konnten die an dem Anionenausstrom beteiligten Anionenkan{\"a}le, sowie deren Ca2+-abh{\"a}ngigen regulatorischen Komponenten identifiziert und mit Hilfe der TEVC-Technik elektrophysiologisch an intakten Arabidopsis thaliana-Pollenschl{\"a}uchen charakterisiert werden. Weiterhin konnte die physiologische Rolle der f{\"u}r den Anionenausstrom verantwortlichen Kan{\"a}le auf das polare Zellwachstum in Arabidopsis thaliana Pollenschl{\"a}uchen nachgewiesen werden. Durch Transkriptionsanalysen wurde die Expression des S-Typ-Anionenkanals SLAH3 sowie der R-Typ-Anionenkan{\"a}le ALMT12, ALMT13 und ALMT14 in Arabidopsis thaliana Pollenschl{\"a}uchen belegt und deren transkriptionelle Regulation durch die Anionenkonzentration und Komposition des Keimungsmediums nachgewiesen werden. Eine elektrophysiologische Charakterisierung an intakten Arabidopsis thaliana Pollenschl{\"a}uchen konnte sowohl einen Anstieg der SLAH3 vermittelten S-Typ-Str{\"o}me, als auch ALMT12-, ALMT13- und ALMT14 vermittelte R Typ-Anionenstr{\"o}me bei steigenden Anionenkonzentrationen im Keimungsmedium nachweisen. Die Charakterisierung der Verlustmutanten von SLAH3, ALMT12, ALMT13 und ALMT14 resultierte in einer Abnahme des Anionenausstroms und einer Reduktion des L{\"a}ngenwachstums der getesteten Mutanten. Es konnten ebenfalls die regulatorischen Komponenten der Signalkette zur Anionenkanalaktivierung identifiziert werden. Die Aktivierung von SLAH3 und ALMT12 durch die Calcium-abh{\"a}ngigen Kinasen CPK2, CPK20 und CPK6 aus Arabidopsis thaliana Pollenschl{\"a}uchen konnte mittels einer Kombination von elektrophysiologischen- und molekularbiologischen Techniken nachgewiesen werden. Somit wurden nicht nur die f{\"u}r den Anionenausstrom verantwortlichen Anionenkan{\"a}le identifiziert, sondern auch die Signalkette zu deren Aktivierung durch spitzenlokalisierte Calcium-abh{\"a}ngige Kinasen aufgekl{\"a}rt werden. Diese Signalkaskade f{\"u}hrt ebenfalls durch die artifizielle Erh{\"o}hung der zytoplasmatischen Calciumkonzentration durch das Calcium-Ionophor A23187 zu einem Anstieg des S Typ- und R Typ Anionenkanalaktivit{\"a}t in Arabidopsis thaliana-Pollenschl{\"a}uchen. Eine intensivere Charakterisierung des entdeckten Calcium-vermittelten Anionenausstroms erfolgte am transgenen pLat52-Chlorid-Sensor bzw. an YC3.6 Tabak Pollenschl{\"a}uchen durch die Kombination von TEVC-Technik und Fluoreszensmikroskopie. Dies erm{\"o}glichte die simultane Messung der zytoplasmatischen Calcium- bzw. Chloridkonzentration in Nicotiana tabacum Pollenschl{\"a}uchen bei gleichzeitiger Ableitung der Ganzzellstr{\"o}me. Die elektrophysiologische und fluoreszenzmikroskopische Charakterisierung erbrachte erstmals den Nachweis f{\"u}r eine exklusive Lokalisation von hyperpolarisations-aktivierten Calciumkan{\"a}len in der Pollenschlauchspitze, welche sich durch die Verwendung der TEVC-Technik gezielt aktivieren ließen. Diese Aktivierung der spitzenlokalisierten Calciumkan{\"a}le induziert den Anionenausstrom durch den Anstieg der apikalen Calciumkonzentration. Die Inhibierung der Calciumkan{\"a}le durch den Calciumkanalblocker Lanthan f{\"u}hrt zu einem vollst{\"a}ndigen Verlust des Calciumeinstroms und des daraus resultierenden Anioneneinstroms. Durch die Inhibierung der Calciumkan{\"a}le kommt es gleichzeitig zu einer Akkumulation von Chlorid in der apikalen Zone, die zum Anschwellen der Pollenschlauchspitze f{\"u}hrt. Die Inhibierung der Anionenkan{\"a}le durch Niflums{\"a}ure hat hingegen keinen Einfluss auf den spitzenlokalisierten Calciumeinstrom, sondern reduziert nur den gemessenen Anionenausstrom. Somit wird ein kausaler Zusammenhang zwischen der Erh{\"o}hung der apikalen Ca2+-Konzentration und einer Anionenkanalaktivierung weiter verdeutlicht. Durch die Anwendung der TEVC-Technik an intakten Pollenschl{\"a}uchen konnten erstmals Aktionspotenzial {\"a}hnliche Depolarisierungstransienten, welche sich auf die apikale Zone des Pollenschlauchs beschr{\"a}nken und zeitgleich mit dem Anionenausstrom stattfinden, nachgewiesen werden. Durch diese Arbeit kann erstmals ein Modell des Calcium-vermittelten oszillierenden Anionenausstroms aus der Pollenschlauchspitze aufgestellt werden. Dieses verkn{\"u}pft die Regulation der beteiligten R-Typ-Anionenkan{\"a}le ALMT12, ALMT13 und ALMT14 und des S-Typ-Anionenkanals SLAH3 durch die Calcium-abh{\"a}ngigen Kinasen CPK2, CPK20 und CPK6 mit dem spitzenlokalisierten oszillierenden Calciumeinstrom. Das Modell verdeutlicht die physiologische Bedeutung des simultanen Ca2+-Ein- und Anionenausstroms f{\"u}r das polare Zellwachstum von Pollenschl{\"a}uchen.  },
  subject      = {Pollenschlauch},
  language  = {de}
}
@phdthesis{Tsoneva2017,
  author    = {Tsoneva, Desislava},
  title     = {Humanized mouse model: a system to study the interactions of human immune system with vaccinia virus-infected human tumors in mice},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-118983},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {Ein vielversprechender neuer Ansatz zur Behandlung von Krebs beim Menschen ist die Verwendung von onkolytischen Viren, die einen Tumor-spezifischen Tropismus aufweisen. Einer der Top-Kandidaten in diesem Bereich ist das onkolytische Vaccinia Virus (VACV), das bereits vielversprechende Ergebnisse in Tierversuchen und in klinischen Studien gezeigt hat. Aber die von den in vivo in tierischen Modellen erhaltenen Resultate k{\"o}nnten ungenaue Informationen wegen der anatomischen und physiologischen Unterschiede zwischen den Spezies liefern. Andererseits sind Studien in Menschen aufgrund ethischer Erw{\"a}gungen und potenzieller Toxizit{\"a}t nur limitiert m{\"o}glich. Die zahlreichen Einschr{\"a}nkungen und Risiken, die mit den Humanstudien verbunden sind, k{\"o}nnten mit der Verwendung eines humanisierten Mausmodells vermieden werden. Die LIVP-1.1.1, GLV-2b372, GLV-1h68, GLV-1h375, GLV-1h376 and GLV-1h377 VACV St{\"a}mmen wurden von der Genelux Corporation zur Verf{\"u}gung gestellt. GLV-2b372 wurde durch Einf{\"u}gen der TurboFP635 Expressionskassette in den J2R Genlocus des parentalen LIVP-1.1.1-Stammes konstruiert. GLV-1h375, -1h376 and -1h377 kodiert das Gen f{\"u}r den menschlichen CTLA4-blockierenden Einzelketten-Antik{\"o}rper (CTLA4 scAb). Befunde aus Replikations- and Zytotoxizit{\"a}tsstudien zeigten, dass alle sechs Viren Tumorzellen infizieren, sich in ihnen replizieren und sie in Zellkultur schließlich ebenso dosis- und zeitabh{\"a}ngig effizient abt{\"o}ten konnten. CTLA4 scAb und β-Glucuronidase (GusA) Expression sowie Virus Titer in GLV-1h376-infizierten A549-Zellen wurde anhand von ELISA-, β-Glucuronidase- and Standard Plaque-Assays bestimmt. Hierbei zeigte sich eine ausgezeichnete Korrelation mit Korrelationskoeffizienten R2>0.9806. Der durch das GLV-1h376 kodierte CTLA4 scAb wurde erfolgreich aus {\"U}berst{\"a}nden von infizierten CV-1-Zellen gereinigt. CTLA4 scAb hat eine hohe in-vitro-Affinit{\"a}t zu seinem menschlichen CTLA4-Zielmolek{\"u}l sowie abwesende Kreuzreaktivit{\"a}t gegen{\"u}ber murine CTLA4 gezeigt. CTLA4 scAb Funktionalit{\"a}t wurde in Jurkat-Zellen best{\"a}tigt. LIVP-1.1.1, GLV-2b372, GLV-1h68 und GLV-1h376 wurden auch in nicht-tumor{\"o}sen und/oder tumortragenden humanisierten M{\"a}usen getestet. Zun{\"a}chst wurde gezeigt, dass die Injektion von menschlichen CD34+ Stammzellen in die Leber von vorkonditionierten neugeborenen NSG M{\"a}usen zu einer erfolgreichen systemische Rekonstitution mit menschlichen Immunzellen gef{\"u}hrt hat. CD19+-B-Zellen, CD4+- und CD8+-CD3+-T-Zellen, NKp46+CD56- und NKp46+CD56+-NK-Zellen sowie CD33+-myeloischen Zellen wurden detektiert. Die Mehrheit der nachgewisenen humanen h{\"a}matopoetischen Zellen im M{\"a}useblut in den ersten Wochen nach der Humanisierung waren CD19+-B-Zellen, und nur ein kleiner Teil waren CD3+-T-Zellen. Mit der Zeit wurde eine signifikante Ver{\"a}nderung in CD19+/CD3+-Verh{\"a}ltnis beobachtet, die parallel zur Abnahme der B-Zellen und einem Anstieg der T-Zellen kam. Die Implantation von A549-Zellen unter die Haut dieser M{\"a}use f{\"u}hrte zu einem progressiven Tumorwachstum. Bildgebende Verfahren zur Detektion von Virus-vermittelter TurboFP635- und GFP-Expression, Standard Plaque Assays sowie immunohistochemische Analysen best{\"a}tigten die erfolgreiche Invasion der Viren in die subkutanen Tumoren. Die humane CD45+-Zellpopulation in Tumoren wurde haupts{\"a}chlich durch NKp46+CD56bright-NK-Zellen und einen hohen Anteil von aktivierten CD4+- und zytotoxische CD8+-T-Zellen dargestellt. Es wurden jedoch keine signifikanten Unterschiede zwischen den Kontroll- und LIVP-1.1.1-infizierten Tumoren beobachtet, was darauf hindeutete, dass die Rekrutierung von NK- und aktivierten T-Zellen, mehr Tumorgewebe-spezifisch als Virus-abh{\"a}ngig waren. Die GLV-1h376-vermittelten CTLA4 scAb-Expression in den infizierten Tumoren war ebenfalls nicht in der Lage, die Aktivierung von Tumor-infiltrierenden T-Zellen im Vergleich zur Kontrolle und GLV-1h68-behandelten M{\"a}usen, signifikant zu erh{\"o}hen. ELISA-, β-Glucuronidase- and Standard Plaque-Assays zeigten eine eindeutige Korrelation mit den Korrelationskoeffizienten R2>0,9454 zwischen CTLA4 scAb- und GusA-Konzentrationen und Virus Titer in Tumorproben von GLV-1h376-behandelten M{\"a}usen. T-Zellen, die aus der Milz dieser Tumor-tragenden M{\"a}use isoliert wurden, waren funktionell und konnten erfolgreich mit Beads aktiviert werden. Mehr CD25+ und IFN-ɣ+ T-Zellen wurden in der GLV-1h376-Gruppe gefunden, wahrscheinlich aufgrund der CTLA4-Blockade durch die Virus-vermittelte CTLA4 scAb-Expression in den M{\"a}usen. Außerdem wurde eine h{\"o}here Konzentration von IL-2 in dem Kultur{\"u}berstand von diesen Splenozyten im Vergleich zu Kontrollproben nachgewiesen. Im Gegensatz zu der Aktivierung mit Beads konnten T-Zellen von allen drei Maus-Gruppen nicht durch A549 Tumorzellen ex vivo aktiviert werden. Unser Mausmodell hat den besonderen Vorteil, dass sich Tumoren unter der Haut der humanisierten M{\"a}use entwickeln, was eine genaue {\"U}berwachung des Tumorwachstums und Auswertung der onkolytischen Virotherapie erm{\"o}glicht.},
  subject      = {Vaccinia virus},
  language  = {en}
}
@phdthesis{Huewe2017,
  author    = {H{\"u}we, Florian},
  title     = {Electrothermal Investigation on Charge and Heat Transport in the Low-Dimensional Organic Conductor (DCNQI)\(_2\)Cu},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-153492},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {This thesis aimed at the coherent investigation of the electrical and thermal transport properties of the low-dimensional organic conductor (DCNQI)2M (DCNQI: dicyanoquinonediimine; M: metallic counterion). These radical anion salts present a promising, new material class for thermoelectric applications and hence, a consistent characterization of the key parameters is required to evaluate and to optimize their performance. For this purpose, a novel experimental measurement setup enabling the determination of the electrical conductivity, the Seebeck coefficient and the thermal conductivity on a single crystalline specimen has been designed and implemented in this work. The novel measurement setup brought to operation within this thesis enabled a thorough investigation of the thermal transport properties in the (DCNQI)2M system. The thermal conductivity of (DCNQI-h8)2Cu at RT was determined to κ=1.73 W m^(-1) K^(-1). By reducing of the copper content in isostructural, crystalline (DMe-DCNQI)2CuxLi1-x alloys, the electrical conductivity has been lowered by one order of magnitude and the correlated changes in the thermal conductivity allowed for a verification of the Wiedemann-Franz (WF) law at RT. A room temperature Lorenz number of L=(2.48±0.45)⋅〖10〗^(-8) WΩK^(-2) was obtained in agreement with the standard Lorenz number L_0=2,44⋅〖10〗^(-8) WΩK^(-2) for 3D bulk metals. This value appears to be significantly reduced upon cooling below RT, even far above the Debye temperature of θ_D≈82 K, below which a breakdown of the WF law is caused by different relaxation times in response to thermal and to electric field perturbations. The experimental data enabled the first consistent evaluation of the thermoelectric performance of (DCNQI)\$_2\$Cu. The RT power factor of 110 μWm^(-1) K^(-2) is comparable to values obtained on PEDOT-based thermoelectric polymers. The RT figure of merit amounts to zT=0.02 which falls short by a factor of ten compared to the best values of zT=0.42 claimed for conducting polymers. It originates from the larger thermal conductivity in the organic crystals of about 1.73 W m^(-1) K^(-1) in (DCNQI)2Cu. Yet, more elaborate studies on the anisotropy of the thermal conductivity in PEDOT polymers assume their figure of merit to be zT=0.15 at most, recently. Therefore, (DCNQI)2Cu can be regarded as thermoelectric material of similar performance to polymer-based ones. Moreover, it represents one of the best organic n-type thermoelectric materials to date and as such, may also become important in hybrid thermoelectrics in combination with conducting polymers. Upon cooling below room temperature, (DCNQI)2Cu reveals its full potential attaining power factors of 50 mW K^(-2) m^(-1) and exceeding values of zT>0.15 below 40 K. These values represent the best thermoelectric performance in this low-temperature regime for organic as well as inorganic compounds and thus, low-dimensional organic conductors might pave the way toward new applications in cryogenic thermoelectrics. Further improvements may be expected from optimizing the charge carrier concentration by taking control over the CT process via the counterion stack of the crystal lattice. The concept has also been demonstrated in this work. Moreover, the thermoelectric performance in the vicinity of the CDW transition in (MeBr-DCNQI)2Cu was found to be increased by a factor of 5. Accordingly, the diversity of electronic ground states accessible in organic conductors provides scope for further improvements. Finally, the prototype of an all-organic thermoelectric generator has been built in combination with the p-type organic metal TTT2I3. While it only converts about 0.02\% of the provided heat into electrical energy, the specific power output per active area attains values of up to 5 mW cm^(-2). This power output, defining the cost-limiting factor in the recovery of waste heat, is three orders of magnitude larger than in conducting polymer devices and as such, unrivaled in organic thermoelectrics. While the thermoelectric key parameters of (DCNQI)2Cu still lack behind conventional thermoelectrics made of e.g. Bi2Te3, the promising performance together with its potential for improvements make this novel material class an interesting candidate for further exploration. Particularly, the low-cost and energy-efficient synthesis routes of organic materials highlight their relevance for technological applications.},
  subject      = {Radikalanionensalz},
  language  = {en}
}
@phdthesis{Flohr2017,
  author    = {Flohr, Elena Leonie Ruth},
  title     = {The Scents of Interpersonality - On the Influence of Smells on the Evaluation and Processing of Social Stimuli},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-153352},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2017},
  abstract  = {In daily life, olfactory stimuli are potential generators of affective states, but also have a strong influence on social interaction. Pleasant odors have been shown to increase perceived attractiveness and pro-social behavior, whereas unpleasant body odors are often associated with negative personality traits. Since both pleasant odors and positive affective state facilitate pro-social behavior, it is conceivable that the influence of the odors on social interaction is mediated by the induced affective state elicited by the odor itself. The present thesis aims at exploring the impact of hedonic, i.e., pleasant or unpleasant, odors on the processing and evaluation of social stimuli as assessed by verbal, physiological, and behavioral indices. First, I investigate the effects of initially neutral odors which gained threatening value through an aversive conditioning procedure on social stimuli (Study 1). Second, I study the influence of naturally hedonic odors on social interaction. Third, this thesis aims at disentangling differences in the effects of an odor attributed to either a social interaction partner or the environment where the social encounter takes place (Study 2, 3, and 4). In the first study, a context conditioning procedure was applied, during which one out of two long-lasting neutral odors was paired with an unpredictable aversive unconditioned stimulus (US, i.e., white noise). This odor (CTX+) thereby gained threatening value, while another odor (CTX-) remained unpaired and therefore signaled safety. During a test session, facial stimuli were presented within both conditioned olfactory contexts. Results indicate that autonomic arousal was increased to faces when presented in the threatening odor context. Additionally, participants rated facial stimuli as more aversive when presented in the threatening odor as compared to the safety odor, indicating that faces acquire hedonic value from the odor they were presented in. Strikingly, angry facial expressions received additional processing resources when presented within a threatening olfactory context, as reflected on verbal reports and electrodermal activity (EDA). This latter finding suggests that threat-related stimuli, here angry faces, are preferentially processed within an olfactory context where a threat might happen. Considering that the hedonic value of an odor may be quite subjective, I conducted a pilot study in order to identify odors with pleasant vs. unpleasant properties for most participants. Seven odors (four pleasant and three unpleasant) were rated with respect to their valence (pleasant vs. unpleasant), arousal (arousing vs. calm), and intensity. Additionally, EDA was measured. Two pleasant (Citral and Eucalyptol) and two unpleasant ("Animalis" and Isobutyraldehyde) odors were chosen from the original seven. The unpleasant odors were rated as more negative, arousing, and intense than the positive ones, but no differences were found regarding EDA. These four odors were subsequently used in a virtual reality (VR) paradigm with two odor attribution groups. Participants of the social attribution group (n = 59) were always passively guided into the same room (an office) towards one out of two virtual agents who were either paired with the pleasant or the unpleasant odor. Participants of the contextual attribution group (n = 58) were guided into one out of two rooms which were either paired with the pleasant or the unpleasant odor and where they always met the same agent. For both groups, the agents smiled, frowned or remained with a neutral facial expression. This design allowed evaluating the influence of odor valence as a within-subjects factor and the influence of odor attribution as a between-subjects factor. Unpleasant odors facilitated the processing of social cues as reflected by increased verbal and physiological arousal as well as reduced active approach behavior. Specific influence of odor valence on emotional facial expressions was found for ratings, EDA, and facial mimicry, with the unpleasant odor causing a levelling effect on the differences between facial expressions. The social attribution group exhibited larger differences between odors than the contextual group with respect to some variables (i.e., ratings and EDA), but not to others (i.e., electrocortical potentials - ERPs - and approach behavior). In sum, unpleasant in comparison to pleasant odors diminished emotional responses during social interaction, while an additional enhancing effect of the social attribution was observed on some variables. Interestingly, the awareness that an interaction partner would smell (pleasantly or unpleasantly) boosted the emotional reactivity towards them. In Study 3, I adapted the VR paradigm to a within-subjects design, meaning that the different attribution conditions were now manipulated block-wise. Instead of an approach task, participants had to move away from the virtual agent (withdrawal task). Results on the ratings were replicated from Study 2. Specifically, the difference between pleasant and unpleasant odors on valence, arousal, and sympathy ratings was larger in the social as compared to the contextual attribution condition. No effects of odor or attribution were found on EDA, whereas heart rate (HR) showed a stronger acceleration to pleasant odors while participants were passively guided towards the agent. Instead of an approach task, I focused on withdrawal behavior in this study. Interestingly, independently of the attribution condition, participants spent more time withdrawing from virtual agents, when an unpleasant odor was presented. In sum, I demonstrated that the attribution of the odors to the social agent itself had an enhancing effect on their influence on social interaction. In the fourth and last study, I applied a similar within-subjects protocol as in Study 3 with an additional Ultimatum Game task as a measure of social interaction. Overall findings replicated the results of Study 3 with respect to HR and EDA. Strikingly, participants offered less money to virtual agents in the bad smelling room than in the good smelling room. In contrast to Study 3, no effects of odor attribution were found in Study 4. In sum, again I demonstrated that unpleasant odor may lessen social interaction not only when the interaction partner smells badly, but also in more complex interaction situations. In conclusion, I demonstrated that hedonic odors in general influence social interaction. Thus, pleasant odors seem to facilitate, while unpleasant odors seem to reduce interpersonal exchanges. Therefore, the present thesis extends the body of literature on the influence of odors on the processing of social stimuli. Although I found a direct influence of odors on social preferences as well as on the physiological and behavioral responses to social stimuli, I did not disentangle impact of odor per se from the impact of the affective state. Interestingly, odor attribution might play an additional role as mediator of social interactions such as odor effects in social interactions might be boosted when the smell is attributed to an individual. However, the results in this regard were less straightforward, and therefore further investigations are needed. Future research should also take into account gender or other inter-individual differences like social anxiety.},
  subject      = {smell},
  language  = {en}
}