@article{WehnerHuchlerFritz2022,
  author    = {Wehner, Helena and Huchler, Katharina and Fritz, Johannes},
  title     = {Quantification of foraging areas for the Northern Bald Ibis (Geronticus eremita) in the northern Alpine foothills: a random forest model fitted with optical and actively sensed earth observation data},
  series = {Remote Sensing},
  volume    = {14},
  journal   = {Remote Sensing},
  number    = {4},
  issn      = {2072-4292},
  doi       = {10.3390/rs14041015},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-262245},
  year      = {2022},
  abstract  = {The Northern Bald Ibis (Geronticus eremita, NBI) is an endangered migratory species, which went extinct in Europe in the 17th century. Currently, a translocation project in the frame of the European LIFE program is carried out, to reintroduce a migratory population with breeding colonies in the northern and southern Alpine foothills and a common wintering area in southern Tuscany. The population meanwhile consists of about 200 individuals, with about 90\% of them carrying a GPS device on their back. We used biologging data from 2021 to model the habitat suitability for the species in the northern Alpine foothills. To set up a species distribution model, indices describing environmental conditions were calculated from satellite images of Landsat-8, and in addition to the well-proven use of optical remote sensing data, we also included Sentinel-1 actively sensed observation data, as well as climate and urbanization data. A random forest model was fitted on NBI GPS positions, which we used to identify regions with high predicted foraging suitability within the northern Alpine foothills. The model resulted in 84.5\% overall accuracy. Elevation and slope had the highest predictive power, followed by grass cover and VV intensity of Sentinel-1 radar data. The map resulting from the model predicts the highest foraging suitability for valley floors, especially of Inn, Rhine, and Salzach-Valley as well as flatlands, like the Swiss Plateau and the agricultural areas surrounding Lake Constance. Areas with a high suitability index largely overlap with known historic breeding sites. This is particularly noteworthy because the model only refers to foraging habitats without considering the availability of suitable breeding cliffs. Detailed analyses identify the transition zone from extensive grassland management to intensive arable farming as the northern range limit. The modeling outcome allows for defining suitable areas for further translocation and management measures in the frame of the European NBI reintroduction program. Although required in the international IUCN translocation guidelines, the use of models in the context of translocation projects is still not common and in the case of the Northern Bald Ibis not considered in the present Single Species Action Plan of the African-Eurasian Migratory Water bird Agreement. Our species distribution model represents a contemporary snapshot, but sustainability is essential for conservation planning, especially in times of climate change. In this regard, a further model could be optimized by investigating sustainable land use, temporal dynamics, and climate change scenarios.},
  language  = {en}
}
@article{WegenerSchindhelmSauer2022,
  author    = {Wegener, Sonja and Schindhelm, Robert and Sauer, Otto A.},
  title     = {Implementing corrections of isocentric shifts for the stereotactic irradiation of cerebral targets: Clinical validation},
  series = {Journal of Applied Clinical Medical Physics},
  volume    = {23},
  journal   = {Journal of Applied Clinical Medical Physics},
  number    = {5},
  doi       = {10.1002/acm2.13577},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-312906},
  year      = {2022},
  abstract  = {Purpose: Any Linac will show geometric imprecisions, including non-ideal alignment of the gantry, collimator and couch axes, and gantry sag or wobble. Their angular dependence can be quantified and resulting changes of the dose distribution predicted (Wack, JACMP 20(5), 2020). We analyzed whether it is feasible to correct geometric shifts during treatment planning. The successful implementation of such a correction procedure was verified by measurements of different stereotactic treatment plans. Methods: Isocentric shifts were quantified for two Elekta Synergy Agility Linacs using the QualiForMed ISO-CBCT+ module, yielding the shift between kV and MV isocenters, the gantry flex and wobble as well as the positions of couch and collimator rotation axes. Next, the position of each field's isocenter in the Pinnacle treatment planning system was adjusted accordingly using a script. Fifteen stereotactic treatment plans of cerebral metastases (0.34 to 26.53 cm3) comprising 9-11 beams were investigated; 54 gantry and couch combinations in total. Unmodified plans and corrected plans were measured using the Sun Nuclear SRS-MapCHECK with the Stereophan phantom and evaluated using gamma analysis. Results: Geometric imprecisions, such as shifts of up to 0.8 mm between kV and MV isocenter, a couch rotation axis 0.9 mm off the kV isocente,r and gantry flex with an amplitude of 1.1 mm, were found. For eight, mostly small PTVs D98 values declined more than 5\% by simulating these shifts. The average gamma (2\%/2 mm, absolute, global, 20\% threshold) was reduced from 0.53 to 0.31 (0.32 to 0.30) for Linac 1 (Linac 2) when including the isocentric corrections. Thus, Linac 1 reached the accuracy level of Linac 2 after correction. Conclusion: Correcting for Linac geometric deviations during the planning process is feasible and was dosimetrically validated. The dosimetric impact of the geometric imperfections can vary between Linacs and should be assessed and corrected where necessary.},
  language  = {en}
}
@article{WegenerChen2022,
  author    = {Wegener, Christian and Chen, Jiangtian},
  title     = {Allatostatin A signalling: progress and new challenges from a paradigmatic pleiotropic invertebrate neuropeptide family},
  series = {Frontiers in Physiology},
  volume    = {13},
  journal   = {Frontiers in Physiology},
  issn      = {1664-042X},
  doi       = {10.3389/fphys.2022.920529},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-278749},
  year      = {2022},
  abstract  = {Neuropeptides have gained broad attraction in insect neuroscience and physiology, as new genetic tools are increasingly uncovering their wide-ranging pleiotropic functions with high cellular resolution. Allatostatin A (AstA) peptides constitute one of the best studied insect neuropeptide families. In insects and other panarthropods, AstA peptides qualify as brain-gut peptides and have regained attention with the discovery of their role in regulating feeding, growth, activity/sleep and learning. AstA receptor homologs are found throughout the protostomia and group with vertebrate somatostatin/galanin/kisspeptin receptors. In this review, we summarise the current knowledge on the evolution and the pleiotropic and cell-specific non-allatostatic functions of AstA. We speculate about the core functions of AstA signalling, and derive open questions and challengesfor future research on AstA and invertebrate neuropeptides in general.},
  language  = {en}
}
@article{WechAnkenbrandBleyetal.2022,
  author    = {Wech, Tobias and Ankenbrand, Markus Johannes and Bley, Thorsten Alexander and Heidenreich, Julius Frederik},
  title     = {A data-driven semantic segmentation model for direct cardiac functional analysis based on undersampled radial MR cine series},
  series = {Magnetic Resonance in Medicine},
  volume    = {87},
  journal   = {Magnetic Resonance in Medicine},
  number    = {2},
  doi       = {10.1002/mrm.29017},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-257616},
  pages     = {972-983},
  year      = {2022},
  abstract  = {Purpose Image acquisition and subsequent manual analysis of cardiac cine MRI is time-consuming. The purpose of this study was to train and evaluate a 3D artificial neural network for semantic segmentation of radially undersampled cardiac MRI to accelerate both scan time and postprocessing. Methods A database of Cartesian short-axis MR images of the heart (148,500 images, 484 examinations) was assembled from an openly accessible database and radial undersampling was simulated. A 3D U-Net architecture was pretrained for segmentation of undersampled spatiotemporal cine MRI. Transfer learning was then performed using samples from a second database, comprising 108 non-Cartesian radial cine series of the midventricular myocardium to optimize the performance for authentic data. The performance was evaluated for different levels of undersampling by the Dice similarity coefficient (DSC) with respect to reference labels, as well as by deriving ventricular volumes and myocardial masses. Results Without transfer learning, the pretrained model performed moderately on true radial data [maximum number of projections tested, P = 196; DSC = 0.87 (left ventricle), DSC = 0.76 (myocardium), and DSC =0.64 (right ventricle)]. After transfer learning with authentic data, the predictions achieved human level even for high undersampling rates (P = 33, DSC = 0.95, 0.87, and 0.93) without significant difference compared with segmentations derived from fully sampled data. Conclusion A 3D U-Net architecture can be used for semantic segmentation of radially undersampled cine acquisitions, achieving a performance comparable with human experts in fully sampled data. This approach can jointly accelerate time-consuming cine image acquisition and cumbersome manual image analysis.},
  language  = {en}
}
@phdthesis{Weber2022,
  author    = {Weber, Tanja},
  title     = {Untersuchung des Einflusses verschiedener Lebenserfahrungen und unterschiedlicher Serotoninhom{\"o}ostase auf die Neuromorphologie von Pyramidenzellen der CA3-Region des Hippocampus in M{\"a}usen},
  doi       = {10.25972/OPUS-28354},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-283542},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Chronischer Stress hat negative Folgen, die sich im Verhalten und auf neuronaler Ebene {\"a}ußern k{\"o}nnen. Als besonders stressempfindlich gelten die Neurone der dritten Region des hippocampalen Ammonshorns CA3. Sie reagieren auch im bereits ausgereiften Zustand noch sehr sensibel auf {\"a}ußere Einfl{\"u}sse, was als neuronale Plastizit{\"a}t bezeichnet wird. Sie erfahren unter anderem durch Stress und Serotonin morphologische und funktionelle Ver{\"a}nderungen. Serotonin-Transporter wahren das Serotonin-Gleichgewicht, indem sie dessen Wirkung schließlich durch Wiederaufnahme in die Zellen beenden. Polymorphismen, also verschiedene Gen-Varianten, bedingen Unterschiede in der Zahl der verf{\"u}gbaren Transporter. Dieses Wechselspiel zwischen Gen-Varianten des Serotonin-Transporters und Stress wurde an Serotonin-Transporter-Knockout-M{\"a}usen untersucht. Einige M{\"a}use erfuhren bereits fr{\"u}h im Leben Stress, der entweder anhielt oder im sp{\"a}teren Leben positiven Erfahrungen wich; weitere M{\"a}use hingegen machten in fr{\"u}hen Lebensabschnitten positive Erfahrungen, die sich sp{\"a}ter entweder fortsetzten oder durch Stresserfahrungen ersetzt wurden. Nach Durchf{\"u}hrung von Verhaltenstests wurde zudem in deren Golgi-impr{\"a}gnierten Gehirnen die Morphologie der Apikaldendriten von CA3-Kurzschaft-Pyramidenzellen lichtmikroskopisch untersucht und in 3D-Computermodellen abgebildet. Aufgrund regionaler Eigenheiten innerhalb von CA3 wurden diese Neurone verschiedenen Subpopulationen zugeordnet. Tats{\"a}chlich konnten mithilfe der Kombination aus vier verschiedenen Lebensgeschichten und drei unterschiedlichen Serotonin-Transporter-Genotypen Unterschiede in der Morphologie der CA3-Pyramidenzellen zwischen den einzelnen Gruppen festgestellt werden. Ohne Stresserleben zeigten sich die Neurone meist signifikant verzweigter; nach Stresserleben zeigten sich, zumindest in einer bestimmten Subpopulation, signifikante Verminderungen der Spines. M{\"a}use mit zwei oder einem wildtypischen Serotonin-Transporter-Allel und ausschließlich sp{\"a}ten aversiven Erfahrungen hatten signifikant l{\"a}ngere Apikaldendriten als die Referenz mit zwei wildtypischen Allelen und ohne Stresserfahrung; homozygot Serotonin-Transporter-defiziente M{\"a}use der gleichen Lebensgeschichte hatten zur Referenz signifikant verk{\"u}rzte Apikaldendriten. Diese Ergebnisse lassen vermuten, dass Stress in Verbindung mit genetisch bedingt geringen Mengen des Serotonin-Transporters durchaus eine erh{\"o}hte Vulnerabilit{\"a}t f{\"u}r psychische Erkrankungen bedingen k{\"o}nnte, aber dass ausschließlich sp{\"a}te Stresserfahrungen bei h{\"o}heren Mengen des Serotonin-Transporters auch protektiv wirken k{\"o}nnten.},
  subject      = {Ammonshorn},
  language  = {de}
}
@article{WeberMaihoferJaksicetal.2022,
  author    = {Weber, Heike and Maihofer, Adam X. and Jaksic, Nenad and Bojic, Elma Feric and Kucukalic, Sabina and Dzananovic, Emina Sabic and Uka, Aferdita Goci and Hoxha, Blerina and Haxhibeqiri, Valdete and Haxhibeqiri, Shpend and Kravic, Nermina and Umihanic, Mirnesa Muminovic and Franc, Ana Cima and Babic, Romana and Pavlovic, Marko and Mehmedbasic, Alma Bravo and Aukst-Margetic, Branka and Kucukalic, Abdulah and Marjanovic, Damir and Babic, Dragan and Jakovljevic, Miro and Sinanovic, Osman and Avidbegović, Esmina and Agani, Ferid and Warrings, Bodo and Domschke, Katharina and Nievergelt, Caroline M. and Dzubur-Kulenovic, Alma and Erhardt, Angelika},
  title     = {Association of polygenic risk scores, traumatic life events and coping strategies with war-related PTSD diagnosis and symptom severity in the South Eastern Europe (SEE)-PTSD cohort},
  series = {Journal of Neural Transmission},
  volume    = {129},
  journal   = {Journal of Neural Transmission},
  number    = {5-6},
  issn      = {1435-1463},
  doi       = {10.1007/s00702-021-02446-5},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-268541},
  pages     = {661-674},
  year      = {2022},
  abstract  = {Objectives Posttraumatic stress disorder (PTSD) is triggered by extremely stressful environmental events and characterized by high emotional distress, re-experiencing of trauma, avoidance and hypervigilance. The present study uses polygenic risk scores (PRS) derived from the UK Biobank (UKBB) mega-cohort analysis as part of the PGC PTSD GWAS effort to determine the heritable basis of PTSD in the South Eastern Europe (SEE)-PTSD cohort. We further analyzed the relation between PRS and additional disease-related variables, such as number and intensity of life events, coping, sex and age at war on PTSD and CAPS as outcome variables. Methods Association of PRS, number and intensity of life events, coping, sex and age on PTSD were calculated using logistic regression in a total of 321 subjects with current and remitted PTSD and 337 controls previously subjected to traumatic events but not having PTSD. In addition, PRS and other disease-related variables were tested for association with PTSD symptom severity, measured by the Clinician Administrated PTSD Scale (CAPS) by liner regression. To assess the relationship between the main outcomes PTSD diagnosis and symptom severity, each of the examined variables was adjusted for all other PTSD related variables. Results The categorical analysis showed significant polygenic risk in patients with remitted PTSD and the total sample, whereas no effects were found on symptom severity. Intensity of life events as well as the individual coping style were significantly associated with PTSD diagnosis in both current and remitted cases. The dimensional analyses showed as association of war-related frequency of trauma with symptom severity, whereas the intensity of trauma yielded significant results independently of trauma timing in current PTSD. Conclusions The present PRS application in the SEE-PTSD cohort confirms modest but significant polygenic risk for PTSD diagnosis. Environmental factors, mainly the intensity of traumatic life events and negative coping strategies, yielded associations with PTSD both categorically and dimensionally with more significant p-values. This suggests that, at least in the present cohort of war-related trauma, the association of environmental factors and current individual coping strategies with PTSD psychopathology was stronger than the polygenic risk.},
  language  = {en}
}
@phdthesis{Warnecke2022,
  author    = {Warnecke, Sandra},
  title     = {Numerical schemes for multi-species BGK equations based on a variational procedure applied to multi-species BGK equations with velocity-dependent collision frequency and to quantum multi-species BGK equations},
  edition   = {1. Auflage},
  publisher = {W{\"u}rzburg University Press},
  address   = {W{\"u}rzburg},
  isbn      = {978-3-95826-192-1},
  doi       = {10.25972/WUP-978-3-95826-193-8},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-282378},
  school      = {W{\"u}rzburg University Press},
  pages     = {xiii, 203},
  year      = {2022},
  abstract  = {We consider a multi-species gas mixture described by a kinetic model. More precisely, we are interested in models with BGK interaction operators. Several extensions to the standard BGK model are studied. Firstly, we allow the collision frequency to vary not only in time and space but also with the microscopic velocity. In the standard BGK model, the dependence on the microscopic velocity is neglected for reasons of simplicity. We allow for a more physical description by reintroducing this dependence. But even though the structure of the equations remains the same, the so-called target functions in the relaxation term become more sophisticated being defined by a variational procedure. Secondly, we include quantum effects (for constant collision frequencies). This approach influences again the resulting target functions in the relaxation term depending on the respective type of quantum particles. In this thesis, we present a numerical method for simulating such models. We use implicit-explicit time discretizations in order to take care of the stiff relaxation part due to possibly large collision frequencies. The key new ingredient is an implicit solver which minimizes a certain potential function. This procedure mimics the theoretical derivation in the models. We prove that theoretical properties of the model are preserved at the discrete level such as conservation of mass, total momentum and total energy, positivity of distribution functions and a proper entropy behavior. We provide an array of numerical tests illustrating the numerical scheme as well as its usefulness and effectiveness.},
  subject      = {Kinetische Gastheorie},
  language  = {en}
}
@misc{WarmdtFrisch2022,
  author    = {Warmdt, Julia and Frisch, Henrik},
  title     = {Digital Storytelling mit Hund Milo - Eine Geschichte im inklusiven Anfangsunterricht am iPad lesen und weitererz{\"a}hlen},
  doi       = {10.25972/OPUS-29280},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-292803},
  year      = {2022},
  abstract  = {„Digital Storytelling mit Hund Milo" beinhaltet neben dem digitalen Bilderbuch „Hund Milo" (Illustration: Lena Kaufmann) auch Zusatzmaterial sowie Aufgaben zur Differenzierung. Das Bilderbuch und alle Materialien wurden f{\"u}r erste und zweite inklusive Klassen mit Kindern der Grundschule und des Schwerpunkts Geistige Entwicklung konzipiert. Ziel ist es, Sch{\"u}ler:innen im inklusiven Anfangsunterricht in multimodale Erz{\"a}hlm{\"o}glichkeiten der App Book Creator einzuf{\"u}hren (Kapitel eins und zwei), mit denen sie anschließend digital eine Geschichte weitererz{\"a}hlen k{\"o}nnen (Kapitel drei und vier). In Kapitel f{\"u}nf wird den Sch{\"u}ler:innen ein m{\"o}gliches Ende der Geschichte angeboten. Alle Materialien wurden mit Blick auf die oben genannten spezifischen Zielgruppen entwickelt und erprobt. Sie sind im Rahmen des BMBF-gef{\"o}rderten Projekts CoTeach-Arbeitspaket 4 „Medienkompetenzen in inklusiven Grundschulklassen im Bereich Digital Storytelling" entstanden, das von Prof Dr. Sanna Pohlmann-Rother und Prof. Dr. Christoph Ratz geleitet wird.},
  subject      = {Bilderbuch},
  language  = {de}
}
@phdthesis{Wanner2022,
  author    = {Wanner, Jonas Paul},
  title     = {Artificial Intelligence for Human Decision-Makers: Systematization, Perception, and Adoption of Intelligent Decision Support Systems in Industry 4.0},
  doi       = {10.25972/OPUS-25901},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-259014},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Innovative possibilities for data collection, networking, and evaluation are unleashing previously untapped potential for industrial production. However, harnessing this potential also requires a change in the way we work. In addition to expanded automation, human-machine cooperation is becoming more important: The machine achieves a reduction in complexity for humans through artificial intelligence. In fractions of a second large amounts of data of high decision quality are analyzed and suggestions are offered. The human being, for this part, usually makes the ultimate decision. He validates the machine's suggestions and, if necessary, (physically) executes them. Both entities are highly dependent on each other to accomplish the task in the best possible way. Therefore, it seems particularly important to understand to what extent such cooperation can be effective. Current developments in the field of artificial intelligence show that research in this area is particularly focused on neural network approaches. These are considered to be highly powerful but have the disadvantage of lacking transparency. Their inherent computational processes and the respective result reasoning remain opaque to humans. Some researchers assume that human users might therefore reject the system's suggestions. The research domain of explainable artificial intelligence (XAI) addresses this problem and tries to develop methods to realize systems that are highly efficient and explainable. This work is intended to provide further insights relevant to the defined goal of XAI. For this purpose, artifacts are developed that represent research achievements regarding the systematization, perception, and adoption of artificially intelligent decision support systems from a user perspective. The focus is on socio-technical insights with the aim to better understand which factors are important for effective human-machine cooperation. The elaborations predominantly represent extended grounded research. Thus, the artifacts imply an extension of knowledge in order to develop and/ or test effective XAI methods and techniques based on this knowledge. Industry 4.0, with a focus on maintenance, is used as the context for this development.},
  subject      = {K{\"u}nstliche Intelligenz},
  language  = {en}
}
@article{WannerHermHeinrichetal.2022,
  author    = {Wanner, Jonas and Herm, Lukas-Valentin and Heinrich, Kai and Janiesch, Christian},
  title     = {The effect of transparency and trust on intelligent system acceptance: evidence from a user-based study},
  series = {Electronic Markets},
  volume    = {32},
  journal   = {Electronic Markets},
  number    = {4},
  issn      = {1019-6781},
  doi       = {10.1007/s12525-022-00593-5},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-323829},
  pages     = {2079-2102},
  year      = {2022},
  abstract  = {Contemporary decision support systems are increasingly relying on artificial intelligence technology such as machine learning algorithms to form intelligent systems. These systems have human-like decision capacity for selected applications based on a decision rationale which cannot be looked-up conveniently and constitutes a black box. As a consequence, acceptance by end-users remains somewhat hesitant. While lacking transparency has been said to hinder trust and enforce aversion towards these systems, studies that connect user trust to transparency and subsequently acceptance are scarce. In response, our research is concerned with the development of a theoretical model that explains end-user acceptance of intelligent systems. We utilize the unified theory of acceptance and use in information technology as well as explanation theory and related theories on initial trust and user trust in information systems. The proposed model is tested in an industrial maintenance workplace scenario using maintenance experts as participants to represent the user group. Results show that acceptance is performance-driven at first sight. However, transparency plays an important indirect role in regulating trust and the perception of performance.},
  language  = {en}
}
@article{WangBachoferKoehleretal.2022,
  author    = {Wang, Zhiyuan and Bachofer, Felix and Koehler, Jonas and Huth, Juliane and Hoeser, Thorsten and Marconcini, Mattia and Esch, Thomas and Kuenzer, Claudia},
  title     = {Spatial modelling and prediction with the spatio-temporal matrix: a study on predicting future settlement growth},
  series = {Land},
  volume    = {11},
  journal   = {Land},
  number    = {8},
  issn      = {2073-445X},
  doi       = {10.3390/land11081174},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-281856},
  year      = {2022},
  abstract  = {In the past decades, various Earth observation-based time series products have emerged, which have enabled studies and analysis of global change processes. Besides their contribution to understanding past processes, time series datasets hold enormous potential for predictive modeling and thereby meet the demands of decision makers on future scenarios. In order to further exploit these data, a novel pixel-based approach has been introduced, which is the spatio-temporal matrix (STM). The approach integrates the historical characteristics of a specific land cover at a high temporal frequency in order to interpret the spatial and temporal information for the neighborhood of a given target pixel. The provided information can be exploited with common predictive models and algorithms. In this study, this approach was utilized and evaluated for the prediction of future urban/built-settlement growth. Random forest and multi-layer perceptron were employed for the prediction. The tests have been carried out with training strategies based on a one-year and a ten-year time span for the urban agglomerations of Surat (India), Ho-Chi-Minh City (Vietnam), and Abidjan (Ivory Coast). The slope, land use, exclusion, urban, transportation, hillshade (SLEUTH) model was selected as a baseline indicator for the performance evaluation. The statistical results from the receiver operating characteristic curve (ROC) demonstrate a good ability of the STM to facilitate the prediction of future settlement growth and its transferability to different cities, with area under the curve (AUC) values greater than 0.85. Compared with SLEUTH, the STM-based model achieved higher AUC in all of the test cases, while being independent of the additional datasets for the restricted and the preferential development areas.},
  language  = {en}
}
@article{WangKarnatiMadhusudhan2022,
  author    = {Wang, Hongjie and Karnati, Srikanth and Madhusudhan, Thati},
  title     = {Regulation of the homeostatic unfolded protein response in diabetic nephropathy},
  series = {Pharmaceuticals},
  volume    = {15},
  journal   = {Pharmaceuticals},
  number    = {4},
  issn      = {1424-8247},
  doi       = {10.3390/ph15040401},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-267143},
  year      = {2022},
  abstract  = {A growing body of scientific evidence indicates that protein homeostasis, also designated as proteostasis, is causatively linked to chronic diabetic nephropathy (DN). Experimental studies have demonstrated that the insulin signaling in podocytes maintain the homeostatic unfolded protein response (UPR). Insulin signaling via the insulin receptor non-canonically activates the spliced X-box binding protein-1 (sXBP1), a highly conserved endoplasmic reticulum (ER) transcription factor, which regulates the expression of genes that control proteostasis. Defective insulin signaling in mouse models of diabetes or the genetic disruption of the insulin signaling pathway in podocytes propagates hyperglycemia induced maladaptive UPR and DN. Insulin resistance in podocytes specifically promotes activating transcription factor 6 (ATF6) dependent pathogenic UPR. Akin to insulin, recent studies have identified that the cytoprotective effect of anticoagulant serine protease-activated protein C (aPC) in DN is mediated by sXBP1. In mouse models of DN, treatment with chemical chaperones that improve protein folding provides an additional benefit on top of currently used ACE inhibitors. Understanding the molecular mechanisms that transmute renal cell specific adaptive responses and that deteriorate renal function in diabetes will enable researchers to develop new therapeutic regimens for DN. Within this review, we focus on the current understanding of homeostatic mechanisms by which UPR is regulated in DN.},
  language  = {en}
}
@article{WangStoecklLietal.2022,
  author    = {Wang, Chenglong and St{\"o}ckl, Sabine and Li, Shushan and Herrmann, Marietta and Lukas, Christoph and Reinders, Yvonne and Sickmann, Albert and Gr{\"a}ssel, Susanne},
  title     = {Effects of extracellular vesicles from osteogenic differentiated human BMSCs on osteogenic and adipogenic differentiation capacity of na{\"i}ve human BMSCs},
  series = {Cells},
  volume    = {11},
  journal   = {Cells},
  number    = {16},
  issn      = {2073-4409},
  doi       = {10.3390/cells11162491},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-286112},
  year      = {2022},
  abstract  = {Osteoporosis, or steroid-induced osteonecrosis of the hip, is accompanied by increased bone marrow adipogenesis. Such a disorder of adipogenic/osteogenic differentiation, affecting bone-marrow-derived mesenchymal stem cells (BMSCs), contributes to bone loss during aging. Here, we investigated the effects of extracellular vesicles (EVs) isolated from human (h)BMSCs during different stages of osteogenic differentiation on the osteogenic and adipogenic differentiation capacity of na{\"i}ve (undifferentiated) hBMSCs. We observed that all EV groups increased viability and proliferation capacity and suppressed the apoptosis of na{\"i}ve hBMSCs. In particular, EVs derived from hBMSCs at late-stage osteogenic differentiation promoted the osteogenic potential of na{\"i}ve hBMSCs more effectively than EVs derived from na{\"i}ve hBMSCs (na{\"i}ve EVs), as indicated by the increased gene expression of COL1A1 and OPN. In contrast, the adipogenic differentiation capacity of na{\"i}ve hBMSCs was inhibited by treatment with EVs from osteogenic differentiated hBMSCs. Proteomic analysis revealed that osteogenic EVs and na{\"i}ve EVs contained distinct protein profiles, with pro-osteogenic and anti-adipogenic proteins encapsulated in osteogenic EVs. We speculate that osteogenic EVs could serve as an intercellular communication system between bone- and bone-marrow adipose tissue, for transporting osteogenic factors and thus favoring pro-osteogenic processes. Our data may support the theory of an endocrine circuit with the skeleton functioning as a ductless gland.},
  language  = {en}
}
@article{WaltmannSchlagenhaufDeserno2022,
  author    = {Waltmann, Maria and Schlagenhauf, Florian and Deserno, Lorenz},
  title     = {Sufficient reliability of the behavioral and computational readouts of a probabilistic reversal learning task},
  series = {Behavior Research Methods},
  volume    = {54},
  journal   = {Behavior Research Methods},
  number    = {6},
  issn      = {1554-3528},
  doi       = {10.3758/s13428-021-01739-7},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-324246},
  pages     = {2993-3014},
  year      = {2022},
  abstract  = {Task-based measures that capture neurocognitive processes can help bridge the gap between brain and behavior. To transfer tasks to clinical application, reliability is a crucial benchmark because it imposes an upper bound to potential correlations with other variables (e.g., symptom or brain data). However, the reliability of many task readouts is low. In this study, we scrutinized the retest reliability of a probabilistic reversal learning task (PRLT) that is frequently used to characterize cognitive flexibility in psychiatric populations. We analyzed data from N = 40 healthy subjects, who completed the PRLT twice. We focused on how individual metrics are derived, i.e., whether data were partially pooled across participants and whether priors were used to inform estimates. We compared the reliability of the resulting indices across sessions, as well as the internal consistency of a selection of indices. We found good to excellent reliability for behavioral indices as derived from mixed-effects models that included data from both sessions. The internal consistency was good to excellent. For indices derived from computational modeling, we found excellent reliability when using hierarchical estimation with empirical priors and including data from both sessions. Our results indicate that the PRLT is well equipped to measure individual differences in cognitive flexibility in reinforcement learning. However, this depends heavily on hierarchical modeling of the longitudinal data (whether sessions are modeled separately or jointly), on estimation methods, and on the combination of parameters included in computational models. We discuss implications for the applicability of PRLT indices in psychiatric research and as diagnostic tools.},
  language  = {en}
}
@phdthesis{Walther2022,
  author    = {Walther, Pierre},
  title     = {Implizite Bindungsdiagnostik - Untersuchungen zum Zusammenhang zwischen impliziten Einstellungen zu prim{\"a}ren Bezugspersonen und inneren Arbeitsmodellen von Bindung},
  doi       = {10.25972/OPUS-25978},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-259784},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Die Bindungstheorie und daraus resultierende Annahmen und Diagnostika haben aufgrund ihrer breiten empirischen Absicherung auch weit {\"u}ber die Tradition der Psychoanalyse hinaus ihren Platz in Theorie und Praxis gefunden. Im Bereich der Bindungsdiagnostik sind gegenw{\"a}rtig vermehrt projektive Verfahren, Interviewverfahren oder Fragebogenverfahren im Einsatz, die entweder zeit- und kostenintensiv in der Durchf{\"u}hrung sind oder den Gegenstand Bindung nur unzureichend abbilden. Die hier vorgestellte Untersuchung begegnet dem Forschungsfeld der Bindungsdiagnostik durch die Nutzung impliziter Verfahren. An 15 Kindern aus dem F{\"o}rderschwerpunkt Lernen und 70 einer Regelgrundschule wurden implizite Einstellungen zu Mutter und Vater, sowie zur Pr{\"a}ferenz von N{\"a}he und Spiel erhoben und in Zusammenhang zur Bindungsorganisation gesetzt. Dabei wird aufgezeigt, dass implizite Einstellungen, gemessen durch den Impliziten Assoziationstest (IAT), in einem engen Zusammenhang mit der Bindungsorganisation stehen und deshalb auch f{\"u}r bindungsdiagnostische Prozesse von Relevanz sein k{\"o}nnen.},
  subject      = {Bindungstheorie <Psychologie>},
  language  = {de}
}
@article{WaltherGonzalesGroegeretal.2022,
  author    = {Walther, Kay-Arne and Gonzales, Jos{\´e} Roberto and Gr{\"o}ger, Sabine and Ehmke, Benjamin and Kaner, Dogan and Lorenz, Katrin and Eickholz, Peter and Kocher, Thomas and Kim, Ti-Sun and Schlagenhauf, Ulrich and Koch, Raphael and Meyle, J{\"o}rg},
  title     = {The role of polymorphisms at the Interleukin-1, Interleukin-4, GATA-3 and Cyclooxygenase-2 genes in non-surgical periodontal therapy},
  series = {International Journal of Molecular Sciences},
  volume    = {23},
  journal   = {International Journal of Molecular Sciences},
  number    = {13},
  issn      = {1422-0067},
  doi       = {10.3390/ijms23137266},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-284386},
  year      = {2022},
  abstract  = {Periodontitis is a multifactorial disease. The aim of this explorative study was to investigate the role of Interleukin-(IL)-1, IL-4, GATA-3 and Cyclooxygenase-(COX)-2 polymorphisms after non-surgical periodontal therapy with adjunctive systemic antibiotics (amoxicillin/metronidazole) and subsequent maintenance in a Caucasian population. Analyses were performed using blood samples from periodontitis patients of a multi-center trial (ClinicalTrials.gov NCT00707369=ABPARO-study). Polymorphisms were analyzed using quantitative real-time PCR. Clinical attachment levels (CAL), percentage of sites showing further attachment loss (PSAL) ≥1.3 mm, bleeding on probing (BOP) and plaque score were assessed. Exploratory statistical analysis was performed. A total of 209 samples were genotyped. Patients carrying heterozygous genotypes and single-nucleotide-polymorphisms (SNP) on the GATA-3-IVS4 +1468 gene locus showed less CAL loss than patients carrying wild type. Heterozygous genotypes and SNPs on the IL-1A-889, IL-1B +3954, IL-4-34, IL-4-590, GATA-3-IVS4 +1468 and COX-2-1195 gene loci did not influence CAL. In multivariate analysis, CAL was lower in patients carrying GATA-3 heterozygous genotypes and SNPs than those carrying wild-types. For the first time, effects of different genotypes were analyzed in periodontitis progression after periodontal therapy and during supportive treatment using systemic antibiotics demonstrating a slight association of GATA-3 gene locus with CAL. This result suggests that GATA-3 genotypes are a contributory but non-essential risk factor for periodontal disease progression.},
  language  = {en}
}
@phdthesis{Wallstabe2022,
  author    = {Wallstabe, Lars},
  title     = {Development and preclinical evaluation of tumour-reactive T cells expressing a chemically programmable chimeric antigen receptor},
  doi       = {10.25972/OPUS-17907},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-179071},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {The genetic modification of T cells for the expression a chimeric antigen receptor (CAR) endows them with a new specificity for an antigen. Adoptive immunotherapy with CD19-CAR T cells has achieved high rates of sustained complete remissions in B cell malignancies. However, the downregulation or loss of the targeted antigen after mono-specific CAR T cell therapy, e.g. against CD19 or CD22, has been reported. Targeting multiple antigens on tumour cells, sequentially or simultaneously, could overcome this limitation. Additionally, targeting multiple antigens with CAR T cells could drive the translation from hematologic malignancies to prevalent solid cancers, which often express tumour-associated antigens heterogeneously. We hypothesised that expression of a universal CAR, which can be programmed with hapten-like molecules, could endow T cells with specificities for multiple antigens. In this study we introduce a novel chemically programmable CAR (cpCAR) based on monoclonal antibody h38C2. Our data show, that cpCARs form a reversible chemical bond to molecules containing a diketone-group and therefore can be programmed to acquire multiple specificities. We programmed cpCAR T cells with hapten-like compounds against integrins αvβ3 and α4β1 as well as the folate receptor. We observed tumour cell lysis, IFN ɣ and IL-2 production and proliferation of programmed cpCAR T cells against tumour cells expressing the respective target antigen in vitro. As a reference to cpCARs programmed against αvβ3, we further introduced novel conventional αvβ3-CARs. These CARs, based on humanised variants of monoclonal antibody LM609 (hLM609), directly bind to integrin αvβ3 via their scFv. The four αvβ3-CAR constructs comprised either an scFv with higher affinity (hLM609v7) or lower affinity (hLM609v11) against αvβ3 integrin and either a long (IgG4 hinge, CH2, CH3) or short (IgG4 hinge) extracellular spacer. We selected the hLM609v7-CAR with short spacer, which showed potent anti-tumour reactivity both in vitro and in a murine xenograft model, for comparison with the cpCAR programmed against αvβ3. Our data show specific lysis of αvβ3-positive tumour cells, cytokine production and proliferation of both hLM609-CAR T cells and cpCAR T cells in vitro. However, conventional hLM609-CAR T cells mediated stronger anti-tumour effects compared to cpCAR T cells in the same amount of time. In line with the in vitro data, complete destruction of tumour lesions in a murine melanoma xenograft model was only observed for mice treated with conventional αvβ3-CAR T cells. Collectively, we introduce a cpCAR, which can be programmed against multiple tumour antigens, and hLM609-CARs specific for the integrin αvβ3. The cpCAR technology bears the potential to counteract current limitations, e.g. antigen loss, of current monospecific CAR T cell therapy. Targeting αvβ3 integrin with CAR T cells could have clinical applications in the treatment of solid malignancies, because αvβ3 is not only expressed on a variety of solid malignancies, but also on tumour-associated vasculature and fibroblast.},
  subject      = {Tumorimmunologie},
  language  = {en}
}
@article{WallmannSperlichDuekingMuelleretal.2022,
  author    = {Wallmann-Sperlich, Birgit and D{\"u}king, Peter and M{\"u}ller, Miriam and Frob{\"o}se, Ingo and Sperlich, Billy},
  title     = {Type and intensity distribution of structured and incidental lifestyle physical activity of students and office workers: a retrospective content analysis},
  series = {BMC Public Health},
  volume    = {22},
  journal   = {BMC Public Health},
  doi       = {10.1186/s12889-022-12999-z},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301217},
  year      = {2022},
  abstract  = {Background Physical activity (PA) guidelines acknowledge the health benefits of regular moderate-to-vigorous physical activity (MVPA) regardless of bout duration. However, little knowledge exists concerning the type and intensity distribution of structured and incidental lifestyle PA of students and office workers. The present study aimed to i) assess the duration and distribution of intensity of MVPAs during waking hours ≥50\% of heart rate reserve (HRR), ii) to identify the type of PA through diary assessment, iii) to assign these activities into structured and lifestyle incidental PA, and iv) to compare this information between students and office workers. Methods Twenty-three healthy participants (11 students, 12 office workers) recorded heart rate (HR) with a wrist-worn HR monitor (Polar M600) and filled out a PA diary throughout seven consecutive days (i.e. ≥ 8 waking h/day). Relative HR zones were calculated, and PA diary information was coded using the Compendium of PA. We matched HR data with the reported PA and identified PA bouts during waking time ≥ 50\% HRR concerning duration, HRR zone, type of PA, and assigned each activity to incidental and structured PA. Descriptive measures for time spend in different HRR zones and differences between students and office workers were calculated. Results In total, we analyzed 276.894 s (76 h 54 min 54 s) of waking time in HRR zones ≥50\% and identified 169 different types of PA. The participants spend 31.9 ± 27.1 min/day or 3.9 ± 3.2\% of their waking time in zones of ≥50\% HRR with no difference between students and office workers (p > 0.01). The proportion of assigned incidental lifestyle PA was 76.9 ± 22.5\%. Conclusions The present study provides initial insights regarding the type, amount, and distribution of intensity of structured and incidental lifestyle PA ≥ 50\% HRR. Findings show a substantial amount of incidental lifestyle PA during waking hours and display the importance of promoting a physically active lifestyle. Future research could employ ambulatory assessments with integrated electronic diaries to detect information on the type and context of MVPA during the day.},
  language  = {en}
}
@phdthesis{Wagner2022,
  author    = {Wagner, Martin},
  title     = {Zyto- und Gentoxizit{\"a}t von Zinkoxid-Nanopartikeln in humanen mesenchymalen Stammzellen nach repetitiver Exposition und im Langzeitversuch},
  doi       = {10.25972/OPUS-27572},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-275726},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Zinkoxid-Nanopartikel (ZnO-NP) finden in vielen Produkten des t{\"a}glichen Verbrauchs Verwendung. Daten {\"u}ber die toxikologischen Eigenschaften von ZnO-NP werden kontrovers diskutiert. Die menschliche Haut ist in Bezug auf die ZnO-NP Exposition das wichtigste Kontakt-Organ. Intakte Haut stellt eine suffiziente Barriere gegen{\"u}ber NP dar. Bei defekter Haut ist ein Kontakt zu den proliferierenden Stammzellen m{\"o}glich, sodass diese als wichtiges toxikologische Ziel f{\"u}r NP darstellen. Das Ziel dieser Dissertation war die Bewertung der genotoxischen und zytotoxischen Effekte an humanen mesenchymalen Stammzellen (hMSC) durch niedrig dosierte ZnO-NP nach 24 st{\"u}ndiger Exposition, repetitiven Expositionen und im Langzeitversuch bis zu 6 Wochen. Zytotoxische Wirkungen von ZnO-NP wurden mit 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazoliumbromid-Test (MTT) gemessen. Dar{\"u}ber hinaus wurde die Genotoxizit{\"a}t durch den Comet-Assay bewertet. Zur Langzeitbeobachtung bis zu 6 Wochen wurde die Transmissionselektronenmikroskopie (TEM) verwendet. Zytotoxizit{\"a}t nach 24-st{\"u}ndiger ZnO-NP-Exposition war ab einer Konzentration von 50 µg/ml nachweisbar. Genotoxizit{\"a}t konnten bereits bei Konzentrationen von 1 und 10 µg/ml ZnO-NP beschrieben werden. Wiederholte Exposition verst{\"a}rkte die Zyto-, aber nicht die Genotoxizit{\"a}t. Eine intrazellul{\"a}re NP-Akkumulation mit Penetration der Zellorganelle wurde bei einer Exposition bis zu 6 Wochen beobachtet. Die Ergebnisse deuten auf zytotoxische und genotoxisches Effekte von ZnO-NP hin. Bereits geringe Dosen von ZnO-NP k{\"o}nnen bei wiederholter Exposition toxische Wirkungen hervorrufen sowie eine langfristige Zellakkumulation. Diese Daten sollten bei der Verwendung von ZnO-NP an gesch{\"a}digter Haut ber{\"u}cksichtigt werden.},
  subject      = {nanoparticle},
  language  = {de}
}
@book{Wagner2022,
  author    = {Wagner, Horst-G{\"u}nter},
  title     = {Golf von Neapel : Landschaftswandel durch Verst{\"a}dterung},
  publisher = {wbg Academic},
  address   = {Darmstadt},
  isbn      = {978-3-534-40635-7},
  doi       = {10.25972/OPUS-25052},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-250525},
  publisher      = {Universit{\"a}t W{\"u}rzburg},
  pages     = {172},
  year      = {2022},
  abstract  = {In vielen mediterranen K{\"u}stenniederungen entstand seit 1950 infolge von Gebirgsentv{\"o}lkerung, Infrastrukturausbau, neuer Gewerbe sowie illegaler Baut{\"a}tigkeit ein fast l{\"u}ckenloses Verst{\"a}dterungsband. Am Golf von Neapel konnte dieser Landschaftswandel {\"u}ber eine lange Zeit beobachtet und durch zahlreiche Vergleichsfotos, Kartierungen, Luft- und Satellitenbilder und Interviews dokumentiert werden. Horst-G{\"u}nter Wagner zeigt in diesem Band die Ver{\"a}nderungen der K{\"u}stenebene und erl{\"a}utert ihre Ursachen.},
  subject      = {Golf von Neapel},
  language  = {de}
}
@article{WagenhaeuserRickertSommeretal.2022,
  author    = {Wagenh{\"a}user, Laura and Rickert, Vanessa and Sommer, Claudia and Wanner, Christoph and Nordbeck, Peter and Rost, Simone and {\"U}{\c{c}}eyler, Nurcan},
  title     = {X-chromosomal inactivation patterns in women with Fabry disease},
  series = {Molecular Genetics \& Genomic Medicine},
  volume    = {10},
  journal   = {Molecular Genetics \& Genomic Medicine},
  number    = {9},
  doi       = {10.1002/mgg3.2029},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-312795},
  year      = {2022},
  abstract  = {Background Although Fabry disease (FD) is an X-linked lysosomal storage disorder caused by mutations in the α-galactosidase A gene (GLA), women may develop severe symptoms. We investigated X-chromosomal inactivation patterns (XCI) as a potential determinant of symptom severity in FD women. Patients and Methods We included 95 women with mutations in GLA (n = 18 with variants of unknown pathogenicity) and 50 related men, and collected mouth epithelial cells, venous blood, and skin fibroblasts for XCI analysis using the methylation status of the androgen receptor gene. The mutated X-chromosome was identified by comparison of samples from relatives. Patients underwent genotype categorization and deep clinical phenotyping of symptom severity. Results 43/95 (45\%) women carried mutations categorized as classic. The XCI pattern was skewed (i.e., ≥75:25\% distribution) in 6/87 (7\%) mouth epithelial cell samples, 31/88 (35\%) blood samples, and 9/27 (33\%) skin fibroblast samples. Clinical phenotype, α-galactosidase A (GAL) activity, and lyso-Gb3 levels did not show intergroup differences when stratified for X-chromosomal skewing and activity status of the mutated X-chromosome. Conclusions X-inactivation patterns alone do not reliably reflect the clinical phenotype of women with FD when investigated in biomaterial not directly affected by FD. However, while XCI patterns may vary between tissues, blood frequently shows skewing of XCI patterns.},
  language  = {en}
}
@article{WagenbrennerPokerHeinzetal.2022,
  author    = {Wagenbrenner, Mike and Poker, Konrad and Heinz, Tizian and Herrmann, Marietta and Horas, Konstantin and Ebert, Regina and Mayer-Wagner, Susanne and Holzapfel, Boris M. and Rudert, Maximilian and Steinert, Andre F. and Weißenberger, Manuel},
  title     = {Mesenchymal stromal cells (MSCs) isolated from various tissues of the human arthritic knee joint possess similar multipotent differentiation potential},
  series = {Applied Sciences},
  volume    = {12},
  journal   = {Applied Sciences},
  number    = {4},
  issn      = {2076-3417},
  doi       = {10.3390/app12042239},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-262334},
  year      = {2022},
  abstract  = {(1) Background: The mesenchymal stromal cells (MSCs) of different tissue origins are applied in cell-based chondrogenic regeneration. However, there is a lack of comparability determining the most suitable cell source for the tissue engineering (TE) of cartilage. The purpose of this study was to compare the in vitro chondrogenic potential of MSC-like cells from different tissue sources (bone marrow, meniscus, anterior cruciate ligament, synovial membrane, and the infrapatellar fat pad removed during total knee arthroplasty (TKA)) and define which cell source is best suited for cartilage regeneration. (2) Methods: MSC-like cells were isolated from five donors and expanded using adherent monolayer cultures. Differentiation was induced by culture media containing specific growth factors. Transforming growth factor (TGF)-ß1 was used as the growth factor for chondrogenic differentiation. Osteogenesis and adipogenesis were induced in monolayer cultures for 27 days, while pellet cell cultures were used for chondrogenesis for 21 days. Control cultures were maintained under the same conditions. After, the differentiation period samples were analyzed, using histological and immunohistochemical staining, as well as molecularbiological analysis by RT-PCR, to assess the expression of specific marker genes. (3) Results: Plastic-adherent growth and in vitro trilineage differentiation capacity of all isolated cells were proven. Flow cytometry revealed the clear co-expression of surface markers CD44, CD73, CD90, and CD105 on all isolated cells. Adipogenesis was validated through the formation of lipid droplets, while osteogenesis was proven by the formation of calcium deposits within differentiated cell cultures. The formation of proteoglycans was observed during chondrogenesis in pellet cultures, with immunohistochemical staining revealing an increased relative gene expression of collagen type II. RT-PCR proved an elevated expression of specific marker genes after successful differentiation, with no significant differences regarding different cell source of native tissue. (4) Conclusions: Irrespective of the cell source of native tissue, all MSC-like cells showed multipotent differentiation potential in vitro. The multipotent differentiation capacity did not differ significantly, and chondrogenic differentiation was proven in all pellet cultures. Therefore, cell suitability for cell-based cartilage therapies and tissue engineering is given for various tissue origins that are routinely removed during total knee arthroplasty (TKA). This study might provide essential information for the clinical tool of cell harvesting, leading to more flexibility in cell availability.},
  language  = {en}
}
@phdthesis{Vyalkova2022,
  author    = {Vyalkova, Anna},
  title     = {Efficacy of approved Smallpox Vaccines in Human and Canine Cancer Therapy: Adipose - tissue derived Stem Cells (ADSC) take up VACV and serve as a protective vehicle for virus delivery to tumors},
  doi       = {10.25972/OPUS-25345},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-253457},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Cancer is one of the major causes of mortality in developed countries. In 2020, there were more than 19.3 million new cases of tumor malignancies worldwide, with more than 10 million deaths. The high rates of cancer cases and mortality necessitate extensive research and the development of novel cancer treatments and antitumor agents. In most cases, conventional treatment strategies for tumor therapy are based on chemotherapeutic treatment, which is supplemented with radiotherapy and/or surgical resection of solid tumors [1]. The use of chemotherapy for the treatment of cancer has significant side effects, the most dangerous of which is toxicity [2] [3]. Modern methods of treating tumors focus on specific drug delivery to the tumor site, actively targeting the tumor cells, as well as the reduction of side effects. One of the most promising current approaches is based on oncolytic viruses. Antitumor properties of viruses were documented at the beginning of the 20th century when some cancer patients recovered after acute viral infections, particularly influenza [4]. Vaccinia virus (VACV) is a member of the Poxviridae family, has natural antitumor properties, and provides a good basis for generating efficient recombinant oncolytic strains. Furthermore, VACV has never been shown to integrate into the host genome [5]. VACV is likely one of the safest and well-studied viruses due to extensive research being done in molecular biology and pathophysiology to investigate its potential as a vaccine for smallpox eradication programs. It has been administered to over 200 million people worldwide. VACV antitumor therapeutic effectiveness has been established in xenograft models with a variety of tumor types for human and canine cancers. Furthermore, recombinant oncolytic VACVs expressing genes encoding light-emitting proteins are a big improvement in a treatment strategy that combines tumor-specific therapies and diagnostics. Oncolytic virus treatments are effective in xenograft cancer models in mice, however, the significant improvements found in mice do not always translate to human cancer patients. These therapies should be tested in dogs with spontaneous cancer not only to offer well translatable information regarding the possible efficiency of viral therapy for human cancers but also to improve the health of our household pets as well. Spontaneous canine tumors are starting to be regarded as an essential model of human cancers that can reproduce the tumor microenvironment and immune response of cancer patients [6]. Just as data obtained in dog experiments can improve cancer therapy for human patients, these findings can also be used to improve treatment protocols in canine patients. Hundreds of studies and dozens of reviews have been published regarding the antitumor effects of various recombinants of VACV, but information on the anticancer features of initial, genetically-unmodified "na{\"i}ve" VACV is still limited. In the first studies, we compared different wild-type, non-modified strains of VACV and tested their oncolytic properties on a panel of various cancer cells derived from different organs. In addition, we also tested a protection system based on the "Trojan horse" concept - using a combination of human Adipose tissue-derived Stem Cells (hADSC) and three different wild-type single plaque purified Vaccinia virus strains: W1, L1, and T1. We showed that all tested human cell lines (FaDu, MDA MB 231, HNT-13, HNT-35, and PC-3) are permissive to L0, W0, T0, L1, W1, and L1 infection. Furthermore, we tested the cytotoxicity of VACV in different cancer cell lines (A549, PC-3, MDA-MB 231, FaDu, HNT-13, HNT-25, and HNT-35). All strains lysed the cells, which was most visible at 96 hpi. We also showed that all tested strains could efficiently infect and multiply in hADSC at a high level. In our in vivo study, we tested the therapeutic efficacy of the wild-type Vaccinia viruses L1, W1, and T1 alone or in combination with hADSC. Wild-type VACV strains were tested for their oncolytic efficiency in human lung adenocarcinoma (A549) in a xenograft model. Treatment of A549 tumors with different doses of L1 and W1 as well as with a L1/ADSC or W1/ADSC combination led to significant tumor regression compared to the PBS control. Additionally, the treatment with L1 and W1 and the combination of L1/ADSC and W1/ADSC was well tolerated by the animals. In the case of the wild-type Tian Tan strain, results were not obtained due to the high cytotoxicity of this strain. Therefore, it should be attenuated for further studies. In the second part of the current study, we investigated the oncolytic effect of C1-opt1, W1 opt1, and L3-opt1 strains based on the wild-type Copenhagen, Wyeth, and Lister vaccines with additional expression of turboFP635. Replication and cytotoxicity assays demonstrated that all 3 viruses were able to infect, replicate in and kill canine tumor cell lines STSA-1 and CT1258 in a virus dose- and time- dependent fashion. Cytotoxicity and replication assays were also performed on cultured canine Adipose-derived Mesenchymal Stem Cells (cAdMSC). The results showed that the cells were lysed much slower than the tumor cells. It suggests that these cells can harbour the virus for a long-term period, allowing the virus to spread into the body and there is enough time to reach the primary tumor or metastases before the cell carrier is destroyed. The viral replication in cAdMSC in our study was lower than in canine cancer cells (STSA-1 and CT1258) at the same MOI. After being studied in cell culture, C1 opt1 and their combination with cAdMSC (C1-opt1/cAdMSC) were used in canine STSA 1 tumor bearing nude mice. We tested the oncolytic effect of the C1-opt1 virus alone and in combination with cAdMSC in the canine STSA-1 xenograft mouse model. Altogether, our findings have shown that both C1-opt1 and cAdMSC/C1-opt1 significantly reduced tumor size or eliminated the tumor. There was no significant difference between C1-opt1 alone and cAdMSC/C1-opt1. The virus particles were mostly found within the tumor after 24 dpi, some amount of virus particles were found in the lungs of mice injected with a combination of cAdMSC/C1-opt1 but not in the group injected with virus alone (cAdMSC might get stuck in the lungs and cause virus propagation there). Taken together, this study provided a proof-of-concept that hADSC/cAdMSC can be used as a carrier system for the "Trojan horse" concept. However, it should be confirmed in another experimental model system, such as canine patients. Moreover, these findings suggest that wild-type, non-modified strains of Vaccinia virus isolates can be considered promising candidates for oncolytic virotherapy, especially in combination with mesenchymal stem cells.},
  subject      = {ADSC},
  language  = {en}
}
@phdthesis{vonSchoenfeld2022,
  author    = {von Sch{\"o}nfeld, Cornelia},
  title     = {Universal prevention of nonsuicidal self-injury for children and adolescents - A systematic review -},
  doi       = {10.25972/OPUS-28702},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-287020},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {In a synopsis of the current state of research regarding NSSI, there are two key findings of this thesis: Firstly, there is a severe scarcity of studies and currently no evidence base for effective universal prevention of NSSI in youth. Secondly, not only the number but also quality of those few studies found was considered too low to draw wide-ranging conclusions and no meta-analysis could be conducted. This conclusion based - among other factors listed in chapter six - on the application of the EPHPP quality assessment tool (Evans, Lasen et al. 2015), which revealed distinct deficiencies and a weak overall study quality for all seven studies. Even if the high prevalence of NSSI among adolescents and the importance of this field of research is increasingly emphasized in contemporary literature (Muehlenkamp, Walsh et al. 2010, Wasserman, Carli et al. 2010, Brunner, Kaess et al. 2014, Plener, Schumacher et al. 2015), the shortage of concrete programs addressing the issue is manifest. The potential to tackle NSSI via prevention is underlined in view of the fact that many recent studies prove the high potential of primary prevention regarding NSSI incidences (Evans, Hawton et al. 2005, Fortune, Sinclair et al. 2008). From the studies included for this review, it can be concluded that most interventions show positive effects in raising awareness, knowledge, understanding of risk factors and help-seeking attitudes among school staff or students, particularly when starting with low knowledge at baseline (Robinson, Gook et al. 2008). Yet, most studies focus on training of gatekeepers and only two programmes address students directly and primarily measure actual NSSI behaviour. This finding highlights the importance of more investigation into concrete NSSI measurement targeting mainly the group of youth. There is a severe lack of literature on primary prevention with suitable contexts and target groups, while reviews on secondary targeted prevention deliver much more potential in the quantity of research (Kothgassner, Robinson et al. 2020, Kothgassner, Goreis et al. 2021). Until that changes, secondary prevention approaches of NSSI should be relied upon first. Looking into the future, several considerations may help advance universal approaches to NSSI. Regarding study planning, it is crucial for future research to pursue a thorough background research, examine the feasibility of interventions, and evaluate the appropriateness of study samples chosen. Moreover, research groups are expected to ensure a close observation of participants in cases of adverse events, in order to offer support, but also detect potential deficiencies in the study organisation. Additionally - in accordance with other research in this field (Plener, Brunner et al. 2010) - findings of this review highlight the necessity to expand fundamental research on functions of NSSI and its (neurobiological) mechanism of formation in order to enhance the knowledge of correlations and improve effective preventive approaches. As psychoeducational methods have shown risks of iatrogenic effects (e.g. in patients with eating disorders) (Stice, 2007 \#10063), it might be worthwhile to focus on improving emotion regulation in order to strengthen protective factors and improve adolescents' management of their everyday lives rather than on merely mitigating possible risk factors. Regarding intervention costs, it appears indispensable to include more cost calculations in the study planning of future research. In contrast to therapeutic interventions of NSSI, which are usually conducted in an in-patient setting and entail high measurable expenses as compared to preventive interventions, preventive approaches may in case of success result in a reduction of clinical presentation (O'Connell, Boat et al. 2009). A promising outlook is entailed by study protocol presenting a skills-based universal prevention program of NSSI "DUDE", a cluster randomized controlled trial scheduled for 16 German schools with a total of 3.200 adolescents (Buerger, Emser et al. 2022). The program is tailored to decrease the incidence of NSSI and avert potential and associated long-term consequences like suicidality among adolescents. It is aimed to provide easy access for adolescents due to its implementation during lesson time at school and is declared cost-effective. Furthermore, DUDE is a promising approach to effective NSSI prevention, as it is intended to improve mental health through the pathway of emotion regulation. It remains to await the implementation of the protocol, which is currently delayed due to the SARS-CoV-19 pandemic. In sum, initial research is promising and suggests that the approach to tackle NSSI via prevention is meaningful. Yet, high-quality studies on the development and evaluation of universal NSSI prevention in adolescents are urgently needed.},
  language  = {en}
}
@phdthesis{vonRueden2022,
  author    = {von R{\"u}den, Martin Frederik},
  title     = {The Venus flytrap - Role of oxylipins in trap performance of Dionaea muscipula},
  doi       = {10.25972/OPUS-27385},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-273854},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {A part of the plant kingdom consists of a variety of carnivorous plants. Some trap their prey using sticky leaves, others have pitfall traps where prey cannot escape once it has fallen inside. A rare trap type is the snap-trap: it appears only twice in the plant kingdom, in the genera Aldrovanda and Dionaea. Even Charles Darwin himself described Dionaea muscipula, the Venus flytrap, with the following words "This plant, commonly called Venus' fly-trap, from the rapidity and force of its movements, is one of the most wonderful in the world". For a long time now, the mechanisms of Dionaea's prey recognition, capture and utilization are of interest for scientists and have been studied intensively. Dionaea presents itself with traps wide-open, ready to catch insects upon contact. For this, the insect has to touch the trigger hairs of the opened trap twice within about 20-30 seconds. Once the prey is trapped, the trap lobes close tight, forming a hermetically sealed "green stomach". Until lately, there was only limited knowledge about the molecular and hormonal mechanisms which lead to prey capture and excretion of digestive fluids. It is known that the digestion process is very water-consuming; therefore, the interplay of digestion-inducing and digestion inhibiting substances was to be analyzed in this work, to elucidate the fine-tuning of the digestive pathway. Special attention was given to the impact of phytohormones on mRNA transcript levels of digestion-related proteins after various stimuli as well as their effect on Dionaea's physiological responses. Jasmonic acid (JA) and its isoleucine-conjugated form, JA-Ile, are an important signal in the jasmonate pathway. In the majority of non-carnivorous plants, jasmonates are critical for the defense against herbivory and pathogens. In Dionaea, this defense mechanism has been restructured towards offensive prey catching. One question in this work was how the frequency of trigger hair bendings is related to the formation of jasmonates and the induction of the digestion process. Upon contact of a prey with the trigger hairs in the inside of the trap, the trap closes and jasmonates are produced biosynthetically. JA-Ile interacts with the COI1- receptor, thereby activating the digestion pathway which leads to the secretion of digestive fluid and production of transporters needed to take up prey-derived nutrients. In this work it could be shown that the number of trigger hair bendings is positively correlated with the level and duration of transcriptional induction of several digestive enzymes/hydrolases. Abscisic acid (ABA) acts, along with many other functions, as the plant "drought stress hormone". It is synthesized either by roots as the primary sensor for water shortage or by guard cells in the leaves. ABA affects a network of several thousand genes whose regulation prepares the plant for drought and initiates protective measurements. It was known from previous work that the application of ABA for 48 hours increased the required amount of trigger hair bendings to achieve trap closure. As the digestion process is very water-intensive, the question arose how exactly the interplay between the jasmonate- and the ABA-pathway is organized, and if ABA could stop the running digestion process once it had been activated. In the present work it could be shown that the application of ABA on intact traps prior to mechanically stimulating the trigger hairs (mechanostimulation) already significantly reduced the transcription of digestive enzymes for an incubation time as short as 4 h, showing that already short-term exposure to ABA counteracts the effects of jasmonates when it comes to initiating the digestion process, but does not inhibit trap closure. Incubation for 24 and 48 hours with 100 μM active ABA had no effect on trap reopening, only very high levels of 200 μM of active ABA inhibited trap reopening but also led to tissue necrosis. As the application of ABA could reduce the transcription of digestive hydrolases, it is likely that Dionaea can stop the digestion process, if corresponding external stimuli are received. Another factor, which only emerged later, was the effect of the wounding-induced systemic jasmonate burst. As efficient as ABA was in inhibiting marker hydrolase expression after mechanostimulation in intact plants, the application of ABA on truncated traps was not able to inhibit mechanostimulation-induced marker hydrolase expression. One reason might be that the ABA-signal is perceived in the roots, and therefore truncated traps were not able to react to it. Another reason might be that the wounding desensitized the tissue for the ABAsignal. Further research is required at this point. Inhibitors of the jasmonate pathway were also used to assess their effect on the regulation of Dionaea´s hunting cycle. Coronatine-O-methyloxime proved to be a potent inhibitor of mechanostimulation-induced expression of digestive enzymes, thus confirming the key regulatory role of jasmonates for Dionaea´s prey consumption mechanism. In a parallel project, the generation of in vitro cultures from sterilized seeds and single plant parts proved successful, which may be important for stock-keeping of future transgenic lines. Protoplasts were generated from leaf blade tissue and transiently transformed, expressing the reporter protein YFP after 24 h of incubation. In the future this might be the starting point for the generation of transgenic lines or the functional testing of DNA constructs.},
  subject      = {Venusfliegenfalle},
  language  = {en}
}
@article{vonHertzbergBoelchLuedemannRudertetal.2022,
  author    = {von Hertzberg-Boelch, Sebastian Philipp and Luedemann, Martin and Rudert, Maximilian and Steinert, Andre F.},
  title     = {PMMA bone cement: antibiotic elution and mechanical properties in the context of clinical use},
  series = {Biomedicines},
  volume    = {10},
  journal   = {Biomedicines},
  number    = {8},
  issn      = {2227-9059},
  doi       = {10.3390/biomedicines10081830},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-281708},
  year      = {2022},
  abstract  = {This literature review discusses the use of antibiotic loaded polymethylmethacrylate bone cements in arthroplasty. The clinically relevant differences that have to be considered when antibiotic loaded bone cements (ALBC) are used either for long-term implant fixation or as spacers for the treatment of periprosthetic joint infections are outlined. In this context, in vitro findings for antibiotic elution and material properties are summarized and transferred to clinical use.},
  language  = {en}
}
@phdthesis{vonCollani2022,
  author    = {von Collani, Sina},
  title     = {Substantivische Suffixableitungen im Deutschen der Goethezeit am Beispiel von Adolph Freiherr von Knigges \({\"U}ber\) \(den\) \(Umgang\) \(mit\) \(Menschen\) oder {\"U}ber den Umgang mit abstrakten Suffixderivationen},
  doi       = {10.25972/OPUS-25371},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-253716},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Der Hauptuntersuchungsgegenstand dieser Arbeit sind substantivische Suffixableitungen, die mindestens einmal im Korpus („{\"U}ber den Umgang mit Menschen" von Adolph Franz Friedrich Ludwig Freiherr (von) Knigge) ein Abstraktum bilden. In methodisch-theoretischer Hinsicht reiht sich die Arbeit u.a. in die Projekte der Innsbrucker Arbeitsstelle ein, bei der eine historisch-synchrone Wortbildungsanalyse im Mittelpunkt steht. Die Arbeit stellt einen Ausschnitt der Wortbildung unter graphematischen, morphologischen, funktionalen und lexikalischen Gesichtspunkten dar und vergleicht diesen Ausschnitt mit dem W{\"o}rterbuchbestand um 1800 und dem Bestand der neuhochdeutschen Sprache der Gegenwart. So soll gezeigt werden, inwieweit das Korpus einen sprachlichen Spiegel seiner Zeit abbildet bzw. inwieweit eine sprachliche Entwicklung (= Wortbildungswandel) stattgefunden hat. In einem Exkurs wird zus{\"a}tzlich die abstrakte Wortbildung Umgang als Mittel zur Textbildung besprochen.},
  subject      = {Deutsche Sprachwissenschaft},
  language  = {de}
}
@phdthesis{vonBosse2022,
  author    = {von Bosse, Felix},
  title     = {Risikofaktoren der venoarteriellen extrakorporalen Membranoxygenierung bei Post-Kardiotomie-Patienten},
  doi       = {10.25972/OPUS-25819},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-258198},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Die extrakorporale Membranoxygenierung ist ein seit Jahrzehnten etabliertes Verfahren, Patienten trotz kardialem und/oder pulmonalem Versagen ein zeitbegrenztes {\"U}berleben zu erm{\"o}glichen. Obgleich sich an den Grundz{\"u}gen der Herangehensweise bis heute wenig ver{\"a}ndert hat, konnte diese Hochrisikotherapie mithilfe der Entwicklung blutschonenderer Materialien und der Verwendung verbesserter Pumpen und Oxygenatoren zunehmend effizienter gestaltet werden. Durch eine {\"U}berlebensanalyse aller ECMO-Patienten der Datenbank der Klinik f{\"u}r Tho-rax-, Herz- und Thorakale Gef{\"a}ßchirurgie des Universit{\"a}tsklinikums W{\"u}rzburg zwischen 2015 und 2018 (172 F{\"a}lle) sollten unabh{\"a}ngige Risikofaktoren f{\"u}r ein negatives Outcome der Therapie identifiziert werden. Insbesondere den Laborparametern w{\"a}hrend der ersten 72 Stunden am System galt hierbei ein besonderes Augenmerk, aber auch Vorerkrankun-gen, Komplikationen, Substitutionen w{\"a}hrend der Therapie und weitere Parameter wurden f{\"u}r jeden Patienten individuell ermittelt und tabellarisch festgehalten. Insgesamt verstarben davon 125 Patienten (72,7\%), 47 Patienten (27,3\%) {\"u}berlebten und konnten entlassen werden. Bei 24 der 125 verstorbenen Patienten (14\%) konnte zwar ein Weaning vom System erfolgreich durchgef{\"u}hrt werden (>24h), sie verstarben jedoch w{\"a}hrend des anschließenden station{\"a}ren Aufenthaltes. Bei den pr{\"a}insertionell erhobenen Parametern waren der BMI und der Euroscore II bei verstorbenen Patienten signifikant h{\"o}her, ebenso wie die Cross-Clamp-Zeit und der SO-FA-Score. F{\"u}r die Laborwerte an ECMO ergaben sich f{\"u}r den Serumlaktatspiegel und die Throm-bozytenanzahl der Patienten die signifikantesten Unterschiede. Auch andere Laborparame-ter erwiesen sich in beiden Gruppen als signifikant unterschiedlich: Insbesondere der Quick Wert der {\"u}berlebenden Patienten war zu Beginn signifikant h{\"o}her. Auch der Fibri-nogenspiegel der Gruppe der {\"u}berlebenden Patienten lag ab der 12 Stunden Marke signi-fikant h{\"o}her. Verstorbene Patienten erhielten mehr Blutpr{\"a}parate als {\"U}berlebende. Außerdem f{\"u}hrte ein dialysepflichtiges Nierenversagen im Laufe der Therapie zu signifikant schlechterem Out-come. Wider Erwarten waren w{\"a}hrend der Therapie auftretende Blutungskomplikationen nicht mit schlechterem Outcome assoziiert. Jedoch konnte bei Auftritt von Thromben im Sys-tem, die einen Austausch des Oxygenators/ECMO-Systems n{\"o}tig machten, sowie Magen-Darm-Isch{\"a}mien und Kompartmentsyndrom ein klarer {\"U}berlebensnachteil erfasst werden. Abschließend ließ sich mittels multivariater logistischer Regression zeigen, dass der SO-FA-Score, der Serumlaktatspiegel und die Thrombozytenanzahl sowie eine adjuvante I-ABP Implantation und der Bedarf einer Nierenersatztherapie den gr{\"o}ßten Einfluss auf das {\"U}berleben der Patienten hatten.},
  subject      = {ECMO},
  language  = {de}
}
@techreport{VomhoffGeisslerHossfeld2022,
  type      = {Working Paper},
  author    = {Vomhoff, Viktoria and Geißler, Stefan and Hoßfeld, Tobias},
  title     = {Identification of Signaling Patterns in Mobile IoT Signaling Traffic},
  series = {W{\"u}rzburg Workshop on Next-Generation Communication Networks (WueWoWas'22)},
  journal   = {W{\"u}rzburg Workshop on Next-Generation Communication Networks (WueWoWas'22)},
  doi       = {10.25972/OPUS-28081},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-280819},
  pages     = {4},
  year      = {2022},
  abstract  = {We attempt to identify sequences of signaling dialogs, to strengthen our understanding of the signaling behavior of IoT devices by examining a dataset containing over 270.000 distinct IoT devices whose signaling traffic has been observed over a 31-day period in a 2G network [4]. We propose a set of rules that allows the assembly of signaling dialogs into so-called sessions in order to identify common patterns and lay the foundation for future research in the areas of traffic modeling and anomaly detection.},
  subject      = {Datennetz},
  language  = {en}
}
@article{vomDahlMuellerBerishaetal.2022,
  author    = {vom Dahl, Christian and M{\"u}ller, Christoph Emanuel and Berisha, Xhevat and Nagel, Georg and Zimmer, Thomas},
  title     = {Coupling the cardiac voltage-gated sodium channel to channelrhodopsin-2 generates novel optical switches for action potential studies},
  series = {Membranes},
  volume    = {12},
  journal   = {Membranes},
  number    = {10},
  issn      = {2077-0375},
  doi       = {10.3390/membranes12100907},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-288228},
  year      = {2022},
  abstract  = {Voltage-gated sodium (Na\(^+\)) channels respond to short membrane depolarization with conformational changes leading to pore opening, Na\(^+\) influx, and action potential (AP) upstroke. In the present study, we coupled channelrhodopsin-2 (ChR2), the key ion channel in optogenetics, directly to the cardiac voltage-gated Na\(^+\) channel (Na\(_v\)1.5). Fusion constructs were expressed in Xenopus laevis oocytes, and electrophysiological recordings were performed by the two-microelectrode technique. Heteromeric channels retained both typical Na\(_v\)1.5 kinetics and light-sensitive ChR2 properties. Switching to the current-clamp mode and applying short blue-light pulses resulted either in subthreshold depolarization or in a rapid change of membrane polarity typically seen in APs of excitable cells. To study the effect of individual K\(^+\) channels on the AP shape, we co-expressed either K\(_v\)1.2 or hERG with one of the Na\(_v\)1.5-ChR2 fusions. As expected, both delayed rectifier K\(^+\) channels shortened AP duration significantly. K\(_v\)1.2 currents remarkably accelerated initial repolarization, whereas hERG channel activity efficiently restored the resting membrane potential. Finally, we investigated the effect of the LQT3 deletion mutant ΔKPQ on the AP shape and noticed an extremely prolonged AP duration that was directly correlated to the size of the non-inactivating Na\(^+\) current fraction. In conclusion, coupling of ChR2 to a voltage-gated Na\(^+\) channel generates optical switches that are useful for studying the effect of individual ion channels on the AP shape. Moreover, our novel optogenetic approach provides the potential for an application in pharmacology and optogenetic tissue-engineering.},
  language  = {en}
}
@article{VollmuthSchlickerGuoetal.2022,
  author    = {Vollmuth, Nadine and Schlicker, Lisa and Guo, Yongxia and Hovhannisyan, Pargev and Janaki-Raman, Sudha and Kurmasheva, Naziia and Schmitz, Werner and Schulze, Almut and Stelzner, Kathrin and Rajeeve, Karthika and Rudel, Thomas},
  title     = {c-Myc plays a key role in IFN-γ-induced persistence of Chlamydia trachomatis},
  series = {eLife},
  volume    = {11},
  journal   = {eLife},
  doi       = {10.7554/eLife.76721},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301385},
  year      = {2022},
  abstract  = {Chlamydia trachomatis (Ctr) can persist over extended times within their host cell and thereby establish chronic infections. One of the major inducers of chlamydial persistence is interferon-gamma (IFN-γ) released by immune cells as a mechanism of immune defence. IFN-γ activates the catabolic depletion of L-tryptophan (Trp) via indoleamine-2,3-dioxygenase (IDO), resulting in persistent Ctr. Here, we show that IFN-γ induces the downregulation of c-Myc, the key regulator of host cell metabolism, in a STAT1-dependent manner. Expression of c-Myc rescued Ctr from IFN-γ-induced persistence in cell lines and human fallopian tube organoids. Trp concentrations control c-Myc levels most likely via the PI3K-GSK3β axis. Unbiased metabolic analysis revealed that Ctr infection reprograms the host cell tricarboxylic acid (TCA) cycle to support pyrimidine biosynthesis. Addition of TCA cycle intermediates or pyrimidine/purine nucleosides to infected cells rescued Ctr from IFN-γ-induced persistence. Thus, our results challenge the longstanding hypothesis of Trp depletion through IDO as the major mechanism of IFN-γ-induced metabolic immune defence and significantly extends the understanding of the role of IFN-γ as a broad modulator of host cell metabolism.},
  language  = {en}
}
@article{VollmerVollmerLangetal.2022,
  author    = {Vollmer, Andreas and Vollmer, Michael and Lang, Gernot and Straub, Anton and Shavlokhova, Veronika and K{\"u}bler, Alexander and Gubik, Sebastian and Brands, Roman and Hartmann, Stefan and Saravi, Babak},
  title     = {Associations between periodontitis and COPD: An artificial intelligence-based analysis of NHANES III},
  series = {Journal of Clinical Medicine},
  volume    = {11},
  journal   = {Journal of Clinical Medicine},
  number    = {23},
  issn      = {2077-0383},
  doi       = {10.3390/jcm11237210},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-312713},
  year      = {2022},
  abstract  = {A number of cross-sectional epidemiological studies suggest that poor oral health is associated with respiratory diseases. However, the number of cases within the studies was limited, and the studies had different measurement conditions. By analyzing data from the National Health and Nutrition Examination Survey III (NHANES III), this study aimed to investigate possible associations between chronic obstructive pulmonary disease (COPD) and periodontitis in the general population. COPD was diagnosed in cases where FEV (1)/FVC ratio was below 70\% (non-COPD versus COPD; binary classification task). We used unsupervised learning utilizing k-means clustering to identify clusters in the data. COPD classes were predicted with logistic regression, a random forest classifier, a stochastic gradient descent (SGD) classifier, k-nearest neighbors, a decision tree classifier, Gaussian naive Bayes (GaussianNB), support vector machines (SVM), a custom-made convolutional neural network (CNN), a multilayer perceptron artificial neural network (MLP), and a radial basis function neural network (RBNN) in Python. We calculated the accuracy of the prediction and the area under the curve (AUC). The most important predictors were determined using feature importance analysis. Results: Overall, 15,868 participants and 19 feature variables were included. Based on k-means clustering, the data were separated into two clusters that identified two risk characteristic groups of patients. The algorithms reached AUCs between 0.608 (DTC) and 0.953\% (CNN) for the classification of COPD classes. Feature importance analysis of deep learning algorithms indicated that age and mean attachment loss were the most important features in predicting COPD. Conclusions: Data analysis of a large population showed that machine learning and deep learning algorithms could predict COPD cases based on demographics and oral health feature variables. This study indicates that periodontitis might be an important predictor of COPD. Further prospective studies examining the association between periodontitis and COPD are warranted to validate the present results.},
  language  = {en}
}
@article{VollmerVollmerLangetal.2022,
  author    = {Vollmer, Andreas and Vollmer, Michael and Lang, Gernot and Straub, Anton and K{\"u}bler, Alexander and Gubik, Sebastian and Brands, Roman C. and Hartmann, Stefan and Saravi, Babak},
  title     = {Performance analysis of supervised machine learning algorithms for automatized radiographical classification of maxillary third molar impaction},
  series = {Applied Sciences},
  volume    = {12},
  journal   = {Applied Sciences},
  number    = {13},
  issn      = {2076-3417},
  doi       = {10.3390/app12136740},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-281662},
  year      = {2022},
  abstract  = {Background: Oro-antral communication (OAC) is a common complication following the extraction of upper molar teeth. The Archer and the Root Sinus (RS) systems can be used to classify impacted teeth in panoramic radiographs. The Archer classes B-D and the Root Sinus classes III, IV have been associated with an increased risk of OAC following tooth extraction in the upper molar region. In our previous study, we found that panoramic radiographs are not reliable for predicting OAC. This study aimed to (1) determine the feasibility of automating the classification (Archer/RS classes) of impacted teeth from panoramic radiographs, (2) determine the distribution of OAC stratified by classification system classes for the purposes of decision tree construction, and (3) determine the feasibility of automating the prediction of OAC utilizing the mentioned classification systems. Methods: We utilized multiple supervised pre-trained machine learning models (VGG16, ResNet50, Inceptionv3, EfficientNet, MobileNetV2), one custom-made convolutional neural network (CNN) model, and a Bag of Visual Words (BoVW) technique to evaluate the performance to predict the clinical classification systems RS and Archer from panoramic radiographs (Aim 1). We then used Chi-square Automatic Interaction Detectors (CHAID) to determine the distribution of OAC stratified by the Archer/RS classes to introduce a decision tree for simple use in clinics (Aim 2). Lastly, we tested the ability of a multilayer perceptron artificial neural network (MLP) and a radial basis function neural network (RBNN) to predict OAC based on the high-risk classes RS III, IV, and Archer B-D (Aim 3). Results: We achieved accuracies of up to 0.771 for EfficientNet and MobileNetV2 when examining the Archer classification. For the AUC, we obtained values of up to 0.902 for our custom-made CNN. In comparison, the detection of the RS classification achieved accuracies of up to 0.792 for the BoVW and an AUC of up to 0.716 for our custom-made CNN. Overall, the Archer classification was detected more reliably than the RS classification when considering all algorithms. CHAID predicted 77.4\% correctness for the Archer classification and 81.4\% for the RS classification. MLP (AUC: 0.590) and RBNN (AUC: 0.590) for the Archer classification as well as MLP 0.638) and RBNN (0.630) for the RS classification did not show sufficient predictive capability for OAC. Conclusions: The results reveal that impacted teeth can be classified using panoramic radiographs (best AUC: 0.902), and the classification systems can be stratified according to their relationship to OAC (81.4\% correct for RS classification). However, the Archer and RS classes did not achieve satisfactory AUCs for predicting OAC (best AUC: 0.638). Additional research is needed to validate the results externally and to develop a reliable risk stratification tool based on the present findings.},
  language  = {en}
}
@article{VollmerSaraviVollmeretal.2022,
  author    = {Vollmer, Andreas and Saravi, Babak and Vollmer, Michael and Lang, Gernot Michael and Straub, Anton and Brands, Roman C. and K{\"u}bler, Alexander and Gubik, Sebastian and Hartmann, Stefan},
  title     = {Artificial intelligence-based prediction of oroantral communication after tooth extraction utilizing preoperative panoramic radiography},
  series = {Diagnostics},
  volume    = {12},
  journal   = {Diagnostics},
  number    = {6},
  issn      = {2075-4418},
  doi       = {10.3390/diagnostics12061406},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-278814},
  year      = {2022},
  abstract  = {Oroantral communication (OAC) is a common complication after tooth extraction of upper molars. Profound preoperative panoramic radiography analysis might potentially help predict OAC following tooth extraction. In this exploratory study, we evaluated n = 300 consecutive cases (100 OAC and 200 controls) and trained five machine learning algorithms (VGG16, InceptionV3, MobileNetV2, EfficientNet, and ResNet50) to predict OAC versus non-OAC (binary classification task) from the input images. Further, four oral and maxillofacial experts evaluated the respective panoramic radiography and determined performance metrics (accuracy, area under the curve (AUC), precision, recall, F1-score, and receiver operating characteristics curve) of all diagnostic approaches. Cohen's kappa was used to evaluate the agreement between expert evaluations. The deep learning algorithms reached high specificity (highest specificity 100\% for InceptionV3) but low sensitivity (highest sensitivity 42.86\% for MobileNetV2). The AUCs from VGG16, InceptionV3, MobileNetV2, EfficientNet, and ResNet50 were 0.53, 0.60, 0.67, 0.51, and 0.56, respectively. Expert 1-4 reached an AUC of 0.550, 0.629, 0.500, and 0.579, respectively. The specificity of the expert evaluations ranged from 51.74\% to 95.02\%, whereas sensitivity ranged from 14.14\% to 59.60\%. Cohen's kappa revealed a poor agreement for the oral and maxillofacial expert evaluations (Cohen's kappa: 0.1285). Overall, present data indicate that OAC cannot be sufficiently predicted from preoperative panoramic radiography. The false-negative rate, i.e., the rate of positive cases (OAC) missed by the deep learning algorithms, ranged from 57.14\% to 95.24\%. Surgeons should not solely rely on panoramic radiography when evaluating the probability of OAC occurrence. Clinical testing of OAC is warranted after each upper-molar tooth extraction.},
  language  = {en}
}
@article{VollandKauppSchmitzetal.2022,
  author    = {Volland, Julian Manuel and Kaupp, Johannes and Schmitz, Werner and W{\"u}nsch, Anna Chiara and Balint, Julia and M{\"o}llmann, Marc and El-Mesery, Mohamed and Frackmann, Kyra and Peter, Leslie and Hartmann, Stefan and K{\"u}bler, Alexander Christian and Seher, Axel},
  title     = {Mass spectrometric metabolic fingerprinting of 2-Deoxy-D-Glucose (2-DG)-induced inhibition of glycolysis and comparative analysis of methionine restriction versus glucose restriction under perfusion culture in the murine L929 model system},
  series = {International Journal of Molecular Sciences},
  volume    = {23},
  journal   = {International Journal of Molecular Sciences},
  number    = {16},
  issn      = {1422-0067},
  doi       = {10.3390/ijms23169220},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-286007},
  year      = {2022},
  abstract  = {All forms of restriction, from caloric to amino acid to glucose restriction, have been established in recent years as therapeutic options for various diseases, including cancer. However, usually there is no direct comparison between the different restriction forms. Additionally, many cell culture experiments take place under static conditions. In this work, we used a closed perfusion culture in murine L929 cells over a period of 7 days to compare methionine restriction (MetR) and glucose restriction (LowCarb) in the same system and analysed the metabolome by liquid chromatography mass spectrometry (LC-MS). In addition, we analysed the inhibition of glycolysis by 2-deoxy-D-glucose (2-DG) over a period of 72 h. 2-DG induced very fast a low-energy situation by a reduced glycolysis metabolite flow rate resulting in pyruvate, lactate, and ATP depletion. Under perfusion culture, both MetR and LowCarb were established on the metabolic level. Interestingly, over the period of 7 days, the metabolome of MetR and LowCarb showed more similarities than differences. This leads to the conclusion that the conditioned medium, in addition to the different restriction forms, substantially reprogramm the cells on the metabolic level.},
  language  = {en}
}
@article{VogtKollikowskiWeidneretal.2022,
  author    = {Vogt, Marius L. and Kollikowski, Alexander M. and Weidner, Franziska and Strinitz, Marc and Feick, J{\"o}rn and Essig, Fabian and Neugebauer, Herrmann and Haeusler, Karl Georg and Pham, Mirko and Maerz, Alexander},
  title     = {Safety and Effectiveness of the New Generation APERIO® Hybrid Stent-retriever Device in Large Vessel Occlusion Stroke},
  series = {Clinical Neuroradiology},
  volume    = {32},
  journal   = {Clinical Neuroradiology},
  number    = {1},
  doi       = {10.1007/s00062-021-01122-1},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-264817},
  pages     = {141-151},
  year      = {2022},
  abstract  = {Background It is unknown whether technological advancement of stent-retriever devices influences typical observational indicators of safety or effectiveness. Methods Observational retrospective study of APERIO® (AP) vs. new generation APERIO® Hybrid (APH) (Acandis®, Pforzheim, Germany) stent-retriever device (01/2019-09/2020) for mechanical thrombectomy (MT) in large vessel occlusion (LVO) stroke. Primary effectiveness endpoint was successful recanalization eTICI (expanded Thrombolysis In Cerebral Ischemia) ≥ 2b67, primary safety endpoint was occurrence of hemorrhagic complications after MT. Secondary outcome measures were time from groin puncture to first pass and successful reperfusion, and the total number of passes needed to achieve the final recanalization result. Results A total of 298 patients with LVO stroke who were treated by MT matched the inclusion criteria: 148 patients (49.7\%) treated with AP vs. 150 patients (50.3\%) treated with new generation APH. Successful recanalization was not statistically different between both groups: 75.7\% for AP vs. 79.3\% for APH; p = 0.450. Postinterventional hemorrhagic complications and particularly subarachnoid hemorrhage as the entity possibly associated with stent-retriever device type was significantly less frequent in the group treated with the APH: 29.7\% for AP and 16.0\% for APH; p = 0.005; however, rates of symptomatic hemorrhage with clinical deterioration and in domo mortality were not statistically different. Neither the median number of stent-retriever passages needed to achieve final recanalization, time from groin puncture to first pass, time from groin puncture to final recanalization nor the number of cases in which successful recanalization could only be achieved by using a different stent-retriever as bail-out device differed between both groups. Conclusion In the specific example of the APERIO® stent-retriever device, we observed that further technological developments of the new generation device were not associated with disadvantages with respect to typical observational indicators of safety or effectiveness.},
  language  = {en}
}
@phdthesis{Vogel2022,
  author    = {Vogel, Sebastian},
  title     = {Determinants of saproxylic biodiversity and conclusions for conservation},
  doi       = {10.25972/OPUS-28926},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-289266},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Over the past centuries, anthropogenic utilization has fundamentally changed the appearance of European forest ecosystems. Constantly growing and changing demands have led to an enormous decline in ecological key elements and a structural homogenization of most forests. These changes have been accompanied by widespread declines of many forest-dwelling and especially saproxylic, i.e. species depending on deadwood. In order to counteract this development, various conservation strategies have been developed, but they primarily focus on a quantitative deadwood enrichment. However, the diversity of saproxylic species is furthermore driven by a variety of abiotic and biotic determinants as well as interactions between organisms. A detailed understanding of these processes has so far been largely lacking. The aim of the present thesis was therefore to improve the existing ecological knowledge of determinants influencing saproxylic species and species communities in order to provide the basis for evidence-based and adapted conservation measures. In chapter II of this thesis, I first investigated the impact of sun exposure, tree species, and their combination on saproxylic beetles, wood-inhabiting fungi, and spiders. Therefore, logs and branches of six tree species were set up under different sun exposures in an experimental approach. The impact of sun exposure and tree species strongly differed among single saproxylic taxa as well as diameters of deadwood. All investigated taxa were affected by sun exposure, whereby sun exposure resulted in a higher alpha-diversity of taxa recorded in logs and a lower alpha-diversity of saproxylic beetles reared from branches compared to shading by canopy. Saproxylic beetles and wood-inhabiting fungi as obligate saproxylic species were additionally affected by tree species. In logs, the respective impact of both determinants also resulted in divergent community compositions. Finally, a rarefaction/extrapolation method was used to evaluate the effectiveness of different combinations of tree species and sun exposure for the conservation of saproxylic species diversity. Based on this procedure, a combination of broadleaved and coniferous as well as hard- and softwood tree species was identified to support preferably high levels of saproxylic species diversity. The aim of chapter III was to evaluate the individual conservational importance of tree species for the protection of saproxylic beetles. For this, the list of tree species sampled for saproxylic beetles was increased to 42 different tree species. The considered tree species represented large parts of taxonomic and phylogenetic diversity native to Central Europe as well as the most important non-native tree species of silvicultural interest. Freshly cut branches were set up for one year and saproxylic beetles were reared afterwards for two subsequent years. The study revealed that some tree species, in particular Quercus sp., host a particular high diversity of saproxylic beetles, but tree species with a comparatively medium or low overall diversity were likewise important for red-listed saproxylic beetle species. Compared to native tree species, non-native tree species hosted a similar overall species diversity of saproxylic beetles but differed in community composition. In chapter IV, I finally analysed the interactions of host beetle diversity and the diversity of associated parasitoids by using experimentally manipulated communities of saproxylic beetles and parasitoid Hymenoptera as a model system. Classical approaches of species identification for saproxylic beetles were combined with DNA-barcoding for parasitoid Hymenoptera. The diversity of the host communities was inferred from their phylogenetic composition as well as differences in seven functional traits. Abundance, species richness, and Shannon-diversity of parasitoid Hymenoptera increased with increasing host abundance. However, the phylogenetic and functional dissimilarity of host communities showed no influence on the species communities of parasitoid Hymenoptera. The results clearly indicate an abundance-driven system in which the general availability, not necessarily the diversity of potential hosts, is decisive. In summary, the present thesis corroborates the general importance of deadwood heterogeneity for the diversity of saproxylic species by combining different experimental approaches. In order to increase their efficiency, conservation strategies for saproxylic species should generally promote deadwood from different tree species under different conditions of sun exposure on landscape-level in addition to the present enrichment of a certain deadwood amount. The most effective combinations of tree species should consider broadleaved and coniferous as well as hard- and softwood tree species. Furthermore, in addition to dominant tree species, special attention should be given to native, subdominant, silviculturally unimportant, and rare tree species.},
  language  = {en}
}
@article{VogelRueckertFriedrichetal.2022,
  author    = {Vogel, Patrick and R{\"u}ckert, Martin Andreas and Friedrich, Bernhard and Tietze, Rainer and Lyer, Stefan and Kampf, Thomas and Hennig, Thomas and D{\"o}lken, Lars and Alexiou, Christoph and Behr, Volker Christian},
  title     = {Critical Offset Magnetic PArticle SpectroScopy for rapid and highly sensitive medical point-of-care diagnostics},
  series = {Nature Communications},
  volume    = {13},
  journal   = {Nature Communications},
  doi       = {10.1038/s41467-022-34941-y},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-300893},
  year      = {2022},
  abstract  = {Magnetic nanoparticles (MNPs) have been adapted for many applications, e.g., bioassays for the detection of biomarkers such as antibodies, by controlled engineering of specific surface properties. Specific measurement of such binding states is of high interest but currently limited to highly sensitive techniques such as ELISA or flow cytometry, which are relatively inflexible, difficult to handle, expensive and time-consuming. Here we report a method named COMPASS (Critical-Offset-Magnetic-Particle-SpectroScopy), which is based on a critical offset magnetic field, enabling sensitive detection to minimal changes in mobility of MNP ensembles, e.g., resulting from SARS-CoV-2 antibodies binding to the S antigen on the surface of functionalized MNPs. With a sensitivity of 0.33 fmole/50 µl (≙7 pM) for SARS-CoV-2-S1 antibodies, measured with a low-cost portable COMPASS device, the proposed technique is competitive with respect to sensitivity while providing flexibility, robustness, and a measurement time of seconds per sample. In addition, initial results with blood serum demonstrate high specificity.},
  language  = {en}
}
@phdthesis{Vogel2022,
  author    = {Vogel, Cassandra Ezra},
  title     = {The effects of land-use and agroecological practices on biodiversity and ecosystem services in tropical smallholder farms},
  doi       = {10.25972/OPUS-29066},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-290661},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Biodiversity is in rapid decline worldwide. These declines are more pronounced in areas that are currently biodiversity rich, but economically poor - essentially describing many tropical regions in the Global South where landscapes are dominated by smallholder agriculture. Agriculture is an important driver of biodiversity decline, through habitat destruction and unsustainable practices. Ironically, agriculture itself is dependent on a range of ecosystem services, such as pollination and pest control, provided by biodiversity. Biodiversity on fields and the delivery of ecosystem services to crops is often closely tied to the composition of the surrounding landscape - complex landscapes with a higher proportion of (semi-)natural habitats tend to support a high abundances and biodiversity of pollinators and natural enemies that are beneficial to crop production. However, past landscape scale studies have focused primarily on industrialized agricultural landscapes in the Global North, and context dependent differences between regions and agricultural systems are understudied. Smallholder agriculture supports 2 billion people worldwide and contributes to over half the world's food supply. Yet smallholders, particularly in sub-Saharan Africa, are underrepresented in research investigating the consequences of landscape change and agricultural practices. Where research in smallholder agriculture is conducted, the focus is often on commodity crops, such as cacao, and less on crops that are directly consumed by smallholder households, though the loss of services to these crops could potentially impact the most vulnerable farmers the hardest. Agroecology - a holistic and nature-based approach to agriculture, provides an alternative to unsustainable input-intensive agriculture. Agroecology has been found to benefit smallholders through improved agronomical and food-security outcomes. Co-benefits of agroecological practices with biodiversity and ecosystem services are assumed, but not often empirically tested. In addition, the local and landscape effects on biodiversity and ecosystem services are more commonly studied in isolation, but their potentially interactive effects are so far little explored. Our study region in northern Malawi exemplifies many challenges experienced by smallholder farmers throughout sub-Saharan Africa and more generally in the Global South. Malawi is located in a global biodiversity hotspot, but biodiversity is threatened by rapid habitat loss and a push for input-intensive agriculture by government and other stakeholders. In contrast, agroecology has been effectively promoted and implemented in the study region. We investigated how land-use differences and the agroecological practices affects biodiversity and ecosystem services of multiple taxa in a maize-bean intercropping system (Chapter 2), and pollination of pumpkin (Chapter 3) and pigeon pea (Chapter 4). Additionally, the effects of local and landscape scale shrub- to farmland habitat conversion was investigated on butterfly communities, as well as the potential for agroecology to mitigate these effects (Chapter 5).},
  language  = {en}
}
@phdthesis{Voelckel2022,
  author    = {Voelckel, Markus},
  title     = {Zeitaufgel{\"o}ste Spektroskopie von nanoskaligen Halbleitern und Pyrenderivaten},
  doi       = {10.25972/OPUS-27611},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-276119},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Um den jahrtausendealten Weg der Menschheit vom Papyrus {\"u}ber Buchdruck und siliziumbasierte Halbleiter in Richtung noch leistungsf{\"a}higerer Technologien zu gehen und weiterhin Heureka-Momente zu schaffen, bieten Kohlenstoffnanor{\"o}hren ein weites Forschungsfeld. Besonders die halbleitenden Charakteristika von SWNTs sowie die Manipulation dieser durch Dotierung bergen viele M{\"o}glichkeiten f{\"u}r zuk{\"u}nftige Anwendungen in moderner Elektrotechnologie. Der Weg zu einer industriellen Implementierung von SWNTs in neuartigen optoelektronischen Bauteilen ließe sich durch eine Ausweitung des Wissens bez{\"u}glich SWNTs und der dotierungsbasierten Anpassung ihrer Eigenschaften ebnen. Mit dieser Erkenntniserweiterung als Zielsetzung wurden im Rahmen dieser Dissertation halbleitende, einwandige (6,5)-Kohlenstoffnanor{\"o}hren als chiralit{\"a}tsreine, polymerstabilisierte Proben untersucht. Die ultrakurzzeitaufgel{\"o}ste Spektroskopie der SWNTs erfolgte an organischen Suspensionen wie auch D{\"u}nnschichtfilmen, die je mittels eines gewissen Quantums an Gold(III)-chlorid dotiert worden waren. So konnten die ablaufenden Dynamiken auf einer ps-Zeitskala untersucht werden. In Kapitel 4 konnte mittels transienter Absorptionsexperimente an redoxchemisch p-dotierter SWNT-Suspensionen zun{\"a}chst gezeigt werden, dass sich die bei optischer Anregung gebildeten Trionen nicht analog zu Exzitonen diffusiv entlang der Nanor{\"o}hre bewegen, sondern lokalisiert vorliegen. Die l{\"a}ngere trionischen Zerfallsdauer nach X\$_1\$- verglichen mit X\$_1^+\$-resonanter Anregung zeugt außerdem davon, dass das Trion aus dem Exziton gespeist wird. Der Einfluss der Dotierung auf die Zerfallsdynamiken von X\$_1\$ und X\$_1^+\$ wurde an SWNT-D{\"u}nnschichtfilmen untersucht. Das Photobleichsignal des Exzitons verschiebt hypsochrom und zerf{\"a}llt schneller mit zunehmender Ladungstr{\"a}gerdichte durch h{\"o}herer Gold(III)-chloridkonzentrationen. Dies resultiert aus dem verringerten Abstand zwischen den Ladungstr{\"a}gern, welche als nichtstrahlende L{\"o}schstellen fungieren. F{\"u}r das X\$_1^+\$-PB ist ein {\"a}hnliches Verhalten zu beobachten. Dabei wird dieses Signal mit weiter steigender Dotierung von einer der H-Bande zuzuordnenden Photoabsorption {\"u}berlagert. Diese l{\"a}sst sich in einer starken S{\"a}ttigung der Dotierung wie auch einer hohen Bandkantenverschiebung begr{\"u}nden. In Kapitel 5 wurde die Gr{\"o}ße der Exzitonen und Trionen in dotierten SWNT-D{\"u}nnschichtfilmen mittels des Phasenraumf{\"u}llmodells bestimmt. Dabei lag besonderes Augenmerk auf der Kompensation des PB/PA-{\"U}berlapps, dem schnellen Zerfall, einem Ausgleich von Differenzen zwischen Anrege- und Absorptionsspektrum sowie dem Anteil intrinsischer/dotierter Nanorohrsegmente, um korrigierte Gr{\"o}ßen \$\xi_\mathrm{k}\$ zu erhalten. F{\"u}r die Trionengr{\"o}ße wurde zus{\"a}tzlich der {\"U}berlapp der Absorptionsbanden einbezogen, um korrigierte Werte \$\xi_{\mathrm{T,k}}\$ zu bestimmen. \$\xi_\mathrm{k}\$ betr{\"a}gt in der intrinsischen Form 6\$\pm\$2\,nm und bleibt bis zu einer Ladungstr{\"a}gerdichte \$n_{\mathrm{LT}}<0.10\$\,nm\$^{-1}\$ etwa gleich, anschließend ist ein Absinken bis auf etwa 4\,nm bei \$n_{\mathrm{LT}}\approx0.20\$\,nm\$^{-1}\$ zu beobachten. F{\"u}r diesen Trend ist die {\"U}berlagerung von Exziton- und H-Bande verantwortlich, da so der Faktor zur Bestimmung des Anteils intrinsischer Nanorohrsegmente an der SWNT verf{\"a}lscht wird. Die Abweichung der intrinsischen Gr{\"o}ße von den in der Literatur berichteten 13\$\pm\$3\,nm ist m{\"o}glicherweise auf Unterschiede in der Probenpr{\"a}paration zur{\"u}ckzuf{\"u}hren. F{\"u}r die Trionengr{\"o}ße ergibt sich bei steigender Dotierung ein {\"a}hnliches Verhalten: Sie betr{\"a}gt f{\"u}r \$n_{\mathrm{LT}}<0.20\$\,nm\$^{-1}\$ 1.83\$\pm\$0.47\,nm, was in der Gr{\"o}ßenordnung in guter {\"U}bereinstimmung mit der Literatur ist. F{\"u}r h{\"o}here Dotierungen sinkt \$\xi_{\mathrm{T,k}}\$ bis auf 0.92\$\pm\$0.26nm ab. Dies erkl{\"a}rt sich dadurch, dass bei h{\"o}herer \$n_{\mathrm{LT}}\$ die H-Bande das Spektrum dominiert, sodass der Einfluss der Absorptionsbanden{\"u}berlagerung nicht mehr vollst{\"a}ndig durch den entsprechenden Korrekturfaktor kompensiert werden kann. Kapitel 6 besch{\"a}ftigte sich anstelle redoxchemischer Dotierung der nanoskaligen Halbleiter mit der (spektro-)elektrochemischen Untersuchung von Vorl{\"a}ufern molekularer Radikale. SWV-Messungen weisen dabei darauf hin, dass die Pyrene Pyr1-Pyr3 entsprechend der Anzahl ihrer Substituenten bei Reduktion Mono-, Bi- beziehungsweise Tetraradikale bilden. Die strukturelle {\"A}hnlichkeit der Molek{\"u}le {\"a}ußert sich in gleichen Reduktionspotentialen wie auch {\"a}hnlichen potentialabh{\"a}ngigen Absorptionsspektren. W{\"a}hrend nur marginale Unterschiede in den PL-Spektren der neutralen und reduzierten Spezies festgestellt werden konnte, lieferte das zeitkorrelierte Einzelphotonenz{\"a}hlen aufschlussreichere Ergebnisse: So wird die Fluoreszenzlebensdauer stark von der Polarit{\"a}t der Umgegbung beeinflusst - bereits die Zugabe des Leitsalzes f{\"u}hrt hier zu {\"A}nderungen. Die durchschnittliche Fluoreszenzlebensdauer \$\tau_{\mathrm{av}}\$ sinkt außerdem mit Reduktion und Radikalbildung; f{\"u}r h{\"o}here Emissionswellenl{\"a}ngen ist \$\tau_{\mathrm{av}}\$ außerdem h{\"o}her. Insgesamt verdeutlichten die Experimente die gute Abschirmung zwischen Pyrenkern und Naphthalimidsubstituenten der Molek{\"u}le sowie die Sensibilit{\"a}t gegen{\"u}ber dem Medium durch TICT, das Vorhandensein von Bi- und Tetraradikalen kann allerdings nicht vollst{\"a}ndig belegt werden, wof{\"u}r EPR-Messugen notwendig w{\"a}ren.},
  subject      = {Dotierung},
  language  = {de}
}
@article{VloetFetekeGerlachetal.2022,
  author    = {Vloet, Timo D. and Feteke, Stefanie and Gerlach, Manfred and Romanos, Marcel},
  title     = {Das pharmakologische Management kinder- und jugendpsychiatrischer Notf{\"a}lle : Evidenz und Qualit{\"a}tssicherung},
  series = {Zeitschrift f{\"u}r Kinder- und Jugendpsychiatrie und Psychotherapie},
  volume    = {50},
  journal   = {Zeitschrift f{\"u}r Kinder- und Jugendpsychiatrie und Psychotherapie},
  number    = {4},
  issn      = {1422-4917},
  doi       = {10.1024/1422-4917/a000833},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-280982},
  pages     = {262-274},
  year      = {2022},
  abstract  = {Kinder- und jugendpsychiatrische Notf{\"a}lle sind h{\"a}ufig und stellen die beteiligten {\"A}rztinnen und {\"A}rzte vor besondere Herausforderungen, da eine erhebliche Gefahr f{\"u}r die Patient_innen oder Dritte unter Anwendung m{\"o}glichst wenig invasiver Mittel abzuwenden ist. In diesem Kontext werden neben haltgebenden, deeskalierenden und psychotherapeutischen Optionen h{\"a}ufig auch pharmakologische Interventionen eingesetzt. Da ein Mangel an systematisch erhobenen Daten besteht, findet die pharmakologische Notfallbehandlung in der Kinder- und Jugendpsychiatrie regelhaft im off-label-Bereich statt. Vor dem Hintergrund der komplexen klinischen und rechtlichen Anforderungen an die {\"A}rztinnen und {\"A}rzte werden im vorliegenden Artikel praxisrelevante Hinweise insbesondere zum pharmakologischen Management von in der Praxis h{\"a}ufig auftretenden kinder- und jugendpsychiatrischen Notf{\"a}llen wie akuter Suizidalit{\"a}t, akut psychotischem Erleben, Delir und Bewusstseinsst{\"o}rungen sowie akuter Intoxikation und Alkoholentzugssyndrom gegeben. Weiterhin werden Maßnahmen zur Qualit{\"a}tssicherung und Arzneimittelsicherheit diskutiert.},
  language  = {de}
}
@phdthesis{Vix2022,
  author    = {Vix, Patrick},
  title     = {Die Rolle des Zelladh{\"a}sionsmolek{\"u}ls Carcinoembryonic antigen-related cell adhesion molecule-1 (CEACAM1) bei der lymphogenen Metastasierung des Prostatakarzinoms (PCa)},
  doi       = {10.25972/OPUS-29002},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-290021},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Der epithelialen Pr{\"a}senz des Carcinoembryonic antigen-related cell adhesion molecule-1 (CEACAM1) in Prostatadr{\"u}sen wird eine tumorsupprimierende Funktion zugeschrieben. Maligne Ver{\"a}nderungen des Prostatadr{\"u}senepithels bei einem PCa f{\"u}hren zu einer Abnahme der epithelialen CEACAM1-Expression, zu einem Verlust der Zellpolarit{\"a}t und zu einer erh{\"o}hten Zellproliferation (prostatische intraepitheliale Neoplasie (PIN)). W{\"a}hrend des PIN-Stadiums exprimieren benachbarte Blut- und Lymphgef{\"a}ße CEACAM1. CEACAM1 selbst wirkt pro-angiogen und stimuliert die Gef{\"a}ßneubildung und auch die Neubildung von Lymphgef{\"a}ßen, Lymphangiogenese. Seine Rolle in der Tumor-Lymphangiogenese und dadurch bedingten Metastasierung von Tumoren wurde bisher nicht ausreichend gekl{\"a}rt. Ziel dieser Arbeit war es, die Rolle von CEACAM1 bei der lymphogenen PCa-Metastasierung anhand von immunhistochemischen (IHC) Analysen am humanem PCa-Prostata- und Lymphknoten-(LN)-Gewebe, sowie im Mausmodell zu analysieren. Laut den Immunfluoreszenzanalysen traten in den PIN-Arealen signifikant mehr CEACAM1-positive Blut- und Lymphgef{\"a}ße auf, als in den darauffolgenden Tumorstadien. Weiter wurde eine CEACAM1-Expression in LN-Sinusgewebe bereits bei Niedrig-Risiko-Patienten (pN0) detektiert. Diese fr{\"u}he CEACAM1-Expression trat auch in den LN im PCa-Mausmodell auf. Weiter wurde im LN-Gewebe von „Hoch-Risiko"-Patienten (pN1) eine luminale CEACAM1-Expression innerhalb der aus Tumorzellen bestehenden Dr{\"u}sen beobachtet, die mit der CEACAM1-Expression in nativen Prostatadr{\"u}sen vergleichbar ist. Auch das angiogen-aktivierte Gef{\"a}ßendothel von pN0- und pN1-LN war CEACAM1-positiv. Bei Hoch-Risiko-Patienten (pN1) nahmen die CEACAM1-positiven Blut- und Lymphgef{\"a}ße im Tumorstroma mit zunehmender Dedifferenzierung des Gewebes ab. Die CEACAM1/PSA-Doppelimmun-fluoreszenzanalysen ergaben eine heterogene Expression der beiden Marker bei Intermediate-risk-Patienten und mit zunehmender Dedifferenzierung des Tumorgewebes einen epithelialen Verlust der CEACAM1-Expression in den PSA-positiven G3-Tumordr{\"u}sen. Das Fehlen von PSA in pN0-LN und die nachweisbare Expression von PSA in pN1-LN best{\"a}tigten PSA als geeigneten PCa-Zellmarker in LN. In pN1-LN ohne Dr{\"u}senbildung traten Zellansammlungen mit einer nach außen gerichteten CEACAM1-positiven Front und einem im Zentrum liegenden PSA-positiven Bereich auf. Diese Befunde belegen einen Zusammenhang zwischen der endothelialen CEACAM1-Expression im Sinus und der Mikrometastasierungswahrscheinlichkeit im pN0-LN-Gewebe von PCa-Patienten. Potentiell l{\"a}sst sich daher im Niedrig-Risiko-PCa-Patientenkollektiv {\"u}ber eine CEACAM1-Bestimmung in LN das Risiko f{\"u}r eine Metastasierung fr{\"u}hzeitig erkennen.},
  language  = {de}
}
@phdthesis{Viswanathan2022,
  author    = {Viswanathan, Aravindan},
  title     = {Biochemical and structural characterisation of modules within the SMN complex},
  doi       = {10.25972/OPUS-19474},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-194749},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Cellular proteome profiling revealed that most biomolecules do not exist in isolation, but rather are incorporated into modular complexes. These assembled complexes are usually very large, consisting of 10 subunits on an average and include either proteins alone, or proteins and nucleic acids. Consequently, such macromolecular assemblies rather than individual biopolymers perform the vast majority of cellular activities. The faithful assembly of such molecular assemblies is often aided by trans-acting factors in vivo, to preclude aggregation of complex components and/or non-cognate interactions. A paradigm for an assisted assembly of a macromolecular machine is the formation of the common Sm/LSm core of spliceosomal and histone-mRNA processing U snRNPs. The key assembly factors united in the Protein Arginine Methyltransferase 5 (PRMT5) and the Survival Motor Neuron (SMN) complexes orchestrate the assembly of the Sm/LSm core on the U snRNAs. Assembly is initiated by the PRMT5-complex subunit pICln, which pre-arranges the Sm/LSm proteins into spatial positions occupied in the mature U snRNPs. The SMN complex subsequently binds these Sm/LSm units, displaces pICln and catalyses the Sm ring closure on the Sm-site of the U snRNA. The SMN complex consists of the eponoymous SMN protein linked in a modular network of interactions with eight other proteins, termed Gemins 2-8 and Unrip. Despite functional and structural characterisation of individual protein components and/or sub-complexes of this assembly machinery, coherent understanding of the structural framework of the core SMN complex remained elusive. The current work, employing a combined approach of biochemical and structural studies, aimed to contribute to the understanding of how distinct modules within the SMN complex coalecse to form the macromolecular SMN complex. A novel atomic resolution (1.5 {\AA}) structure of the human Gemin8:7:6 sub-complex, illustrates how the peripheral Gemin7:6 module is tethered to the SMN complex via Gemin8's C-terminus. In this model, Gemin7 engages with both Gemin6 and Gemin8 via the N- and C-termini of its Sm-fold like domain. This highly conserved interaction mode is reflected in the pronounced sequence conservation and identical biochemical behaviour of similar sub-complexes from divergent species, namely S. pombe and C. elegans. Despite lacking significant sequence similarity to the Sm proteins, the dimeric Gemin7:6 complex share structural resemblance to the Sm heteromers. The hypothesis that the dimeric Gemin7:6 functions as a Sm-surrogate during Sm core assembly could not be confirmed in this work. The functional relevance of the structural mimicry of the dimeric Gemin7:6 sub-complex with the Sm heterodimers therefore still remains unclear. Reduced levels of functional SMN protein is the cause of the devastating neurodegenerative disease, Spinal Muscular Atrophy (SMA). The C-terminal YG-zipper motif of SMN is a major hot-spot for most SMA patient mutations. In this work, adding to the existing inventory of the human and fission yeast YG-box models, a novel 2.2 {\AA} crystal structure of the nematode SMN's YG-box domain adopting the glycine zipper motif has been reported. Furthermore, it could be assessed that SMA patient mutations mapping to this YG-box domain greatly influences SMN's self-association competency, a property reflected in both the human and nematode YG-box biochemical handles. The shared molecular architecture and biochemical behaviour of the nematode SMN YG-box domain with its human and fission yeast counterparts, reiterates the pronounced conservation of this oligomerisation motif across divergent organisms. Apart from serving as a multimerization domain, SMN's YG-box also acts as interaction platform for Gemin8. A systematic investigation of SMA causing missense mutations uncovered that Gemin8's incorporation into the SMN complex is influenced by the presence of certain SMA patient mutations, albeit independent of SMN's oligomerisation status. Consequently, loss of Gemin8 association in the presence of SMA patient mutations would also affect the incorporation of Gemin7:6 sub-complex. Gemin8, therefore sculpts the heteromeric SMN complex by bridging the Gemin7:6 and SMN:Gemin2 sub-units, a modular feature shared in both the human and nematode SMN complexes. These findings provide an important foundation and a prospective structural framework for elucidating the core architecture of the SMN complex in the ongoing Cryo-EM studies.},
  subject      = {Proteom},
  language  = {en}
}
@phdthesis{Vinke2022,
  author    = {Vinke, Wiebke},
  title     = {Chondrogenes Differenzierungspotential von BMSCs unter Zugabe von Kartogenin bzw. der Peptidsequenzen KLER und WYRGRL in Pelletkulturen},
  doi       = {10.25972/OPUS-25395},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-253958},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Die in vitro Differenzierung von Knorpelgewebe unter Verwendung von mesenchymalen Stromazellen aus dem Knochenmark (BMSCs) als Zellquelle und Transforming growth factor ß (TGF-ß1) als Wachstumsfaktor ist bereits etabliert. In weiteren Studien haben sich neue m{\"o}glich Differenzierungsfaktoren wie Kartogenin und Peptidsequenzen wie KLER und WYRGRL gezeigt. Ziel dieser Arbeit war es, den Effekt dieser drei Substanzen auf die chondrogene Differenzierung von mesenchymalen Stromazellen in einer Pelletkultur in Anwesenheit von TGF-β zu evaluieren. Die Analyse erfolgte (immun)histologisch und biochemisch durch Bestimmung der knorpelspezifischen EZM-Molek{\"u}le wie Kollagen II und Glykosaminoglykane bzw. des GAG- und Gesamtkollagengehaltes. Insgesamt konnte nach dreiw{\"o}chiger Kultur f{\"u}r keinen der drei zugegebenen Faktoren ein eindeutig positiver Effekt auf die chondrogene Differenzierung von BMSCs nachgewiesen werden. Unter konstanter KGN- Zugabe zeigte sich eine intensivere Kollagen II-F{\"a}rbung, sowie ein signifikant h{\"o}herer Kollagen- und GAG-Gehalt an Tag 10, jedoch auch eine intensivere Kollagen X F{\"a}rbung. Diesbez{\"u}glich sollten noch weitere Untersuchungen, insbesondere auf m{\"o}gliche unerw{\"u}nschte hypertrophe Effekte durchgef{\"u}hrt werden.},
  subject      = {Differenzierung},
  language  = {de}
}
@article{ViljurAbellaAdameketal.2022,
  author    = {Viljur, Mari-Liis and Abella, Scott R. and Ad{\´a}mek, Martin and Alencar, Janderson Batista Rodrigues and Barber, Nicholas A. and Beudert, Burkhard and Burkle, Laura A. and Cagnolo, Luciano and Campos, Brent R. and Chao, Anne and Chergui, Brahim and Choi, Chang-Yong and Cleary, Daniel F. R. and Davis, Thomas Seth and Dechnik-V{\´a}zquez, Yanus A. and Downing, William M. and Fuentes-Ramirez, Andr{\´e}s and Gandhi, Kamal J. K. and Gehring, Catherine and Georgiev, Kostadin B. and Gimbutas, Mark and Gongalsky, Konstantin B. and Gorbunova, Anastasiya Y. and Greenberg, Cathryn H. and Hylander, Kristoffer and Jules, Erik S. and Korobushkin, Daniil I. and K{\"o}ster, Kajar and Kurth, Valerie and Lanham, Joseph Drew and Lazarina, Maria and Leverkus, Alexandro B. and Lindenmayer, David and Marra, Daniel Magnabosco and Mart{\´i}n-Pinto, Pablo and Meave, Jorge A. and Moretti, Marco and Nam, Hyun-Young and Obrist, Martin K. and Petanidou, Theodora and Pons, Pere and Potts, Simon G. and Rapoport, Irina B. and Rhoades, Paul R. and Richter, Clark and Saifutdinov, Ruslan A. and Sanders, Nathan J. and Santos, Xavier and Steel, Zachary and Tavella, Julia and Wendenburg, Clara and Wermelinger, Beat and Zaitsev, Andrey S. and Thorn, Simon},
  title     = {The effect of natural disturbances on forest biodiversity: an ecological synthesis},
  series = {Biological Reviews},
  volume    = {97},
  journal   = {Biological Reviews},
  number    = {5},
  doi       = {10.1111/brv.12876},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-287168},
  pages     = {1930 -- 1947},
  year      = {2022},
  abstract  = {Disturbances alter biodiversity via their specific characteristics, including severity and extent in the landscape, which act at different temporal and spatial scales. Biodiversity response to disturbance also depends on the community characteristics and habitat requirements of species. Untangling the mechanistic interplay of these factors has guided disturbance ecology for decades, generating mixed scientific evidence of biodiversity responses to disturbance. Understanding the impact of natural disturbances on biodiversity is increasingly important due to human-induced changes in natural disturbance regimes. In many areas, major natural forest disturbances, such as wildfires, windstorms, and insect outbreaks, are becoming more frequent, intense, severe, and widespread due to climate change and land-use change. Conversely, the suppression of natural disturbances threatens disturbance-dependent biota. Using a meta-analytic approach, we analysed a global data set (with most sampling concentrated in temperate and boreal secondary forests) of species assemblages of 26 taxonomic groups, including plants, animals, and fungi collected from forests affected by wildfires, windstorms, and insect outbreaks. The overall effect of natural disturbances on α-diversity did not differ significantly from zero, but some taxonomic groups responded positively to disturbance, while others tended to respond negatively. Disturbance was beneficial for taxonomic groups preferring conditions associated with open canopies (e.g. hymenopterans and hoverflies), whereas ground-dwelling groups and/or groups typically associated with shady conditions (e.g. epigeic lichens and mycorrhizal fungi) were more likely to be negatively impacted by disturbance. Across all taxonomic groups, the highest α-diversity in disturbed forest patches occurred under moderate disturbance severity, i.e. with approximately 55\% of trees killed by disturbance. We further extended our meta-analysis by applying a unified diversity concept based on Hill numbers to estimate α-diversity changes in different taxonomic groups across a gradient of disturbance severity measured at the stand scale and incorporating other disturbance features. We found that disturbance severity negatively affected diversity for Hill number q = 0 but not for q = 1 and q = 2, indicating that diversity-disturbance relationships are shaped by species relative abundances. Our synthesis of α-diversity was extended by a synthesis of disturbance-induced change in species assemblages, and revealed that disturbance changes the β-diversity of multiple taxonomic groups, including some groups that were not affected at the α-diversity level (birds and woody plants). Finally, we used mixed rarefaction/extrapolation to estimate biodiversity change as a function of the proportion of forests that were disturbed, i.e. the disturbance extent measured at the landscape scale. The comparison of intact and naturally disturbed forests revealed that both types of forests provide habitat for unique species assemblages, whereas species diversity in the mixture of disturbed and undisturbed forests peaked at intermediate values of disturbance extent in the simulated landscape. Hence, the relationship between α-diversity and disturbance severity in disturbed forest stands was strikingly similar to the relationship between species richness and disturbance extent in a landscape consisting of both disturbed and undisturbed forest habitats. This result suggests that both moderate disturbance severity and moderate disturbance extent support the highest levels of biodiversity in contemporary forest landscapes.},
  language  = {en}
}
@phdthesis{Vietz2022,
  author    = {Vietz, Melanie Sabrina},
  title     = {Pr{\"a}vention von Angsterkrankungen: Etablierung und Validierung des Kognitiven Angstsensitivit{\"a}tstrainings (KAST) - Deutsche Version},
  doi       = {10.25972/OPUS-22312},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-223122},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {Angsterkrankungen stellen mit einer 12-Monats-Pr{\"a}valenz von 14\% die h{\"a}ufigsten psychischen Erkrankungen in der westlichen Gesellschaft dar. Angesichts der hohen querschnittlichen wie sequentiellen Komorbidit{\"a}t von Angsterkrankungen, der ausgepr{\"a}gten individuellen Einschr{\"a}nkungen sowie der hohen {\"o}konomischen Belastung f{\"u}r das Gesundheitssystem ist neben therapeutischen Behandlungsans{\"a}tzen die Entwicklung von kurzzeitigen, kosteng{\"u}nstigen und leicht zug{\"a}nglichen Pr{\"a}ventionsmaßnahmen von großer Bedeutung und steht zunehmend im Fokus des gesundheitspolitischen Interesses, um die Inzidenz von Angsterkrankungen zu reduzieren. Voraussetzung f{\"u}r die Entwicklung von gezielten und damit den effektivsten Pr{\"a}ventionsmaßnahmen sind valide Risikofaktoren, die die Entstehung von Angsterkrankungen beg{\"u}nstigen. Ein Konstrukt, das in der Literatur als subklinisches Symptom in Form einer kognitiven Vulnerabilit{\"a}t f{\"u}r Angsterkrankungen und damit als Risikofaktor angesehen wird, ist die sogenannte Angstsensitivit{\"a}t (AS). AS umfasst die individuelle Tendenz, angstbezogene k{\"o}rperliche Symptome generell als bedrohlich einzustufen und mit aversiven Konsequenzen zu assoziieren. Das Ziel der vorliegenden Arbeit war daher die Etablierung und Validierung eines Pr{\"a}ventionsprogramms zur Reduktion der AS an einer nicht-klinischen Stichprobe von 100 Probanden (18-30 Jahre) mit einer erh{\"o}hten AS (Anxiety Sensitivity Index [ASI-3] ≥17) sowie die Rekrutierung von 100 alters- und geschlechtsangeglichenen Probanden mit niedriger Angstsensitivit{\"a}t (ASI-3 <17). In einem randomisiert-kontrollierten Studiendesign durchliefen die Probanden mit hoher AS entweder das {\"u}ber f{\"u}nf Wochen angelegte „Kognitive Angstsensitivit{\"a}tstraining" (KAST) als erste deutschsprachige {\"U}bersetzung des Computer-basierten „Cognitive Anxiety Sensitivity Treatment" (CAST) von Schmidt et al. (2014) oder wurden der Wartelisten-Kontrollgruppe zugeteilt. Das KAST Training bestand aus einer einmaligen Vermittlung kognitiv-behavioraler Psychoedukation zum Thema Stress und Anspannung sowie deren Auswirkungen auf den K{\"o}rper und der Anleitung von zwei interozeptiven Expositions{\"u}bungen (‚Strohhalm-Atmung' und ‚Hyperventilation'), die {\"u}ber den anschließenden Zeitraum von f{\"u}nf Wochen in Form von Hausaufgaben wiederholt wurden. Es konnte gezeigt werden, dass die Teilnehmer des KAST-Programms nach Beendigung des Trainings (T1) eine signifikant niedrigere AS-Auspr{\"a}gung im Vergleich zur Wartelisten-Kontrollgruppe aufwiesen und diese Reduktion auch {\"u}ber den Katamnese-Zeitraum von sechs Monaten (T2) stabil blieb. Erg{\"a}nzend wurde auch die Targetierbarkeit weiterer intermedi{\"a}rer Risikomarker wie der Trennungsangst (TA), des Index der kardialen Sensitivit{\"a}t sowie der Herzratenvariabilit{\"a}t (HRV) untersucht, die jedoch nicht durch das KAST-Training direkt ver{\"a}ndert werden konnten. Im Vergleich der Subgruppen von Probanden mit hoher AS und gleichzeitig hoher TA (Adult Separation Anxiety Questionnaire [ASA-27] ≥22) und Probanden mit hoher AS, aber niedriger TA (ASA-27 <22) zeigte sich, dass die AS-TA-Hochrisikogruppe ebenfalls gut von der KAST-Intervention profitieren und eine signifikante Reduktion der AS erzielen konnte, indem sie sich bei T1 dem Niveau der Gruppe mit niedriger TA anglich. Zudem korrelierte die prozentuale Ver{\"a}nderung der Einstiegswerte der inneren Anspannung w{\"a}hrend der Strohhalm-Atmungs{\"u}bung positiv mit der prozentualen Ver{\"a}nderung der dimensionalen TA bei T1. Zusammenfassend weisen die Ergebnisse der vorliegenden Arbeit erstmalig auf die Wirksamkeit der deutschsprachigen {\"U}bersetzung des CAST-Programms (Schmidt et al., 2014), eines Computer-basierten, und damit leicht zu implementierenden sowie kosteng{\"u}nstigen Programms, in Bezug auf die Reduktion der AS sowie indirekt der TA hin und k{\"o}nnen damit zur indizierten und demnach besonders effektiven Pr{\"a}vention von Angsterkrankungen in Hochrisikogruppen beitragen.},
  subject      = {Angstst{\"o}rung},
  language  = {de}
}
@article{VetrivelZhangEngeletal.2022,
  author    = {Vetrivel, Sharmilee and Zhang, Ru and Engel, Mareen and Oßwald, Andrea and Watts, Deepika and Chen, Alon and Wielockx, Ben and Sbiera, Silviu and Reincke, Martin and Riester, Anna},
  title     = {Characterization of adrenal miRNA-based dysregulations in Cushing's syndrome},
  series = {International Journal of Molecular Sciences},
  volume    = {23},
  journal   = {International Journal of Molecular Sciences},
  number    = {14},
  issn      = {1422-0067},
  doi       = {10.3390/ijms23147676},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-284394},
  year      = {2022},
  abstract  = {MiRNAs are important epigenetic players with tissue- and disease-specific effects. In this study, our aim was to investigate the putative differential expression of miRNAs in adrenal tissues from different forms of Cushing's syndrome (CS). For this, miRNA-based next-generation sequencing was performed in adrenal tissues taken from patients with ACTH-independent cortisol-producing adrenocortical adenomas (CPA), from patients with ACTH-dependent pituitary Cushing's disease (CD) after bilateral adrenalectomy, and from control subjects. A confirmatory QPCR was also performed in adrenals from patients with other CS subtypes, such as primary bilateral macronodular hyperplasia and ectopic CS. Sequencing revealed significant differences in the miRNA profiles of CD and CPA. QPCR revealed the upregulated expression of miR-1247-5p in CPA and PBMAH (log2 fold change > 2.5, p < 0.05). MiR-379-5p was found to be upregulated in PBMAH and CD (log2 fold change > 1.8, p < 0.05). Analyses of miR-1247-5p and miR-379-5p expression in the adrenals of mice which had been exposed to short-term ACTH stimulation showed no influence on the adrenal miRNA expression profiles. For miRNA-specific target prediction, RNA-seq data from the adrenals of CPA, PBMAH, and control samples were analyzed with different bioinformatic platforms. The analyses revealed that both miR-1247-5p and miR-379-5p target specific genes in the WNT signaling pathway. In conclusion, this study identified distinct adrenal miRNAs as being associated with CS subtypes.},
  language  = {en}
}
@phdthesis{VermaFuehring2022,
  author    = {Verma-F{\"u}hring, Raoul},
  title     = {Die Trabekulopunktion als Pr{\"a}diktiver Test f{\"u}r den Erfolg der Ab Interno Trabekulektomie im Schweineaugenmodell},
  doi       = {10.25972/OPUS-28263},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-282633},
  school      = {Universit{\"a}t W{\"u}rzburg},
  year      = {2022},
  abstract  = {To investigate trabeculopuncture (TP) for predicting the outcome of ab interno trabeculectomy (AIT). Ex vivo porcine anterior segments were perfused and sequentially underwent two procedures, TP and AIT. We concluded that a 10\% reduction in IOP after TP can be used to predict the success (>20\% IOP decrease) of AIT in porcine eyes. As porcine eyes share many similarities with human eyes, our findings may have implications on the validity of this test as a predictor for surgical outcomes of AITs in humans.},
  subject      = {Glaukom},
  language  = {en}
}
@article{VermaFuehringDakroubHanetal.2022,
  author    = {Verma-Fuehring, R. and Dakroub, M. and Han, H. and Hillenkamp, J. and Loewen, N. A.},
  title     = {Trabeculopuncture as a predictive test of distal outflow resistance in canal-based surgery},
  series = {Scientific Reports},
  volume    = {12},
  journal   = {Scientific Reports},
  doi       = {10.1038/s41598-022-13990-9},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-299740},
  year      = {2022},
  abstract  = {We investigated whether trabeculopuncture (TP) could detect distal outflow resistance to predict the outcome of canal-based glaucoma surgery such as ab interno trabeculectomy (AIT). These procedures have a high utilization in open angle glaucoma, but fail in eyes with an unidentified distal outflow resistance. We assigned 81 porcine eyes to two groups: trial (n = 42) and control (n = 39). At 24 h, four YAG-laser trabeculopunctures were placed nasally, followed by a 180° AIT at the same site at 48 h. The proportion of TP responders between both AIT groups was compared. Histology and outflow canalograms were determined. Both post-TP and post-AIT IOPs were lower than baseline IOP (p = 0.015 and p < 0.01, respectively). The success rates of TP and AIT were 69\% and 85.7\%, respectively. Sensitivity and specificity values of TP as predictive test for AIT success were 77.7\% and 83.3\%, respectively. The positive and negative predictive values were 96.6\% and 38.5\%, respectively. We conclude that a 10\% reduction in IOP after TP can be used as a predictor for the success (> 20\% IOP decrease) of 180° AIT in porcine eyes.},
  language  = {en}
}
@article{VenjakobRuedenauerKleinetal.2022,
  author    = {Venjakob, C. and Ruedenauer, F. A. and Klein, A.-M. and Leonhardt, S. D.},
  title     = {Variation in nectar quality across 34 grassland plant species},
  series = {Plant Biology},
  volume    = {24},
  journal   = {Plant Biology},
  number    = {1},
  doi       = {10.1111/plb.13343},
  url       = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-262612},
  pages     = {134 -- 144},
  year      = {2022},
  abstract  = {Floral nectar is considered the most important floral reward for attracting pollinators. It contains large amounts of carbohydrates besides variable concentrations of amino acids and thus represents an important food source for many pollinators. Its nutrient content and composition can, however, strongly vary within and between plant species. The factors driving this variation in nectar quality are still largely unclear. We investigated factors underlying interspecific variation in macronutrient composition of floral nectar in 34 different grassland plant species. Specifically, we tested for correlations between the phylogenetic relatedness and morphology of plants and the carbohydrate (C) and total amino acid (AA) composition and C:AA ratios of nectar. We found that compositions of carbohydrates and (essential) amino acids as well as C:AA ratios in nectar varied significantly within and between plant species. They showed no clear phylogenetic signal. Moreover, variation in carbohydrate composition was related to family-specific structural characteristics and combinations of morphological traits. Plants with nectar-exposing flowers, bowl- or parabolic-shaped flowers, as often found in the Apiaceae and Asteraceae, had nectar with higher proportions of hexoses, indicating a selective pressure to decelerate evaporation by increasing nectar osmolality. Our study suggests that variation in nectar nutrient composition is, among others, affected by family-specific combinations of morphological traits. However, even within species, variation in nectar quality is high. As nectar quality can strongly affect visitation patterns of pollinators and thus pollination success, this intra- and interspecific variation requires more studies to fully elucidate the underlying causes and the consequences for pollinator behaviour.},
  language  = {en}
}