@phdthesis{Abel2023, author = {Abel, Daniel Karl-Joseph}, title = {Weiterentwicklung der Bodenhydrologie des regionalen Klimamodells REMO}, doi = {10.25972/OPUS-31146}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-311468}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Die Bodenfeuchte stellt eine essenzielle Variable f{\"u}r den Energie-, Feuchte- und Stoffaustausch zwischen Landoberfl{\"a}che und Atmosph{\"a}re dar. Ihre Auswirkungen auf Temperatur und Niederschlag sind vielf{\"a}ltig und komplex. Die in Klimamodellen verwendeten Schemata zur Simulation der Bodenfeuchte, auch bodenhydrologische Schemata genannt, sind aufgrund des Ursprungs der Klimamodelle aus Wettermodellen jedoch h{\"a}ufig sehr stark vereinfacht dargestellt. Bei Klimamodellen, die Simulationen mit einer groben Aufl{\"o}sung von mehreren Zehner- oder Hunderterkilometern rechnen, k{\"o}nnen viele Prozesse vernachl{\"a}ssigt werden. Da die Aufl{\"o}sung der Klimamodelle jedoch stetig steigt und mittlerweile beim koordinierten Projekt regionaler Klimamodelle CORDEX-CORE standardm{\"a}ßig bei 0.22° Kantenl{\"a}nge liegt, m{\"u}ssen auch h{\"o}her aufgel{\"o}ste Daten und mehr Prozesse simuliert werden. Dies gilt erst recht mit Blick auf konvektionsaufl{\"o}sende Simulationen mit wenigen Kilometern Kantenl{\"a}nge. Mit steigenden Modellaufl{\"o}sungen steigt zugleich die Komplexit{\"a}t und Differenziertheit der Fragestellungen, die mit Hilfe von Klimamodellen beantwortet werden sollen. An diesem Punkt setzt auch das Projekt BigData@Geo an, in dessen Rahmen die vorliegende Arbeit entstand. Ziel dieses Projektes ist es, hochaufgel{\"o}ste Klimainformationen f{\"u}r den bayerischen Regierungsbezirk Unterfranken f{\"u}r Akteure aus der Land- und Forstwirtschaft sowie dem Weinbau zur Verf{\"u}gung zu stellen. Auf diesen angewandten und grundlegenden Anforderungen und Zielsetzungen basierend, bedarf auch das in dieser Arbeit verwendete regionale Klimamodell REMO (Version 2015) der weiteren Entwicklung. So ist das Hauptziel der Arbeit das bestehende einschichtige bodenhydrologische Schema durch ein mehrschichtiges zu ersetzen. Der Vorteil mehrerer simulierter Bodenschichten besteht darin, dass nun die vertikale Bewegung des Wassers in Form von Versickerung und kapillarem Aufstieg simuliert werden kann. Dies geschieht auf der Basis bodenhydrologischer Parameter, deren Wert in Abh{\"a}ngigkeit vom Boden und der Bodenfeuchte {\"u}ber die Wasserr{\"u}ckhaltekurve bestimmt wird. F{\"u}r diese Kurve existieren verschiedene Parametrisierungen, von denen die Ans{\"a}tze von Clapp-Hornberger und van Genuchten verwendet wurden. Außerdem kann die Bodenfeuchte nun bis zu einer Tiefe von circa 10 m beziehungsweise der Tiefe des anstehenden Gesteins simuliert werden. Damit besteht im Gegensatz zum vorherigen Schema, dessen Tiefe auf die Wurzeltiefe beschr{\"a}nkt ist, die M{\"o}glichkeit, dass Wasser auch unterhalb der Wurzeln zur Verf{\"u}gung stehen kann und somit die absolute im Boden verf{\"u}gbare Wassermenge zunimmt. Die Schichtung erlaubt dar{\"u}ber hinaus die Verdunstung aus unbewachsenem Boden lediglich auf Basis des in der obersten Schicht verf{\"u}gbaren Wassers. Ein weiterer Prozess, der dank der Schichtung und der weiter unten erl{\"a}uterten Datens{\"a}tze neu parametrisiert werden kann, ist die Infiltration. F{\"u}r die Verwendung des Schemas sind Informationen {\"u}ber bodenhydrologische Parameter, die Wurzeltiefe und die Tiefe bis zum anstehenden Gestein erforderlich. Entsprechende Datens{\"a}tze m{\"u}ssen hierf{\"u}r aufbereitet und in das Modell eingebaut werden. Bez{\"u}glich der Wurzeltiefe wurden drei sich bez{\"u}glich der Tiefe, der Definition und der verf{\"u}gbaren Aufl{\"o}sung stark voneinander unterscheidende Datens{\"a}tze verglichen. Letztendlich wird die Wurzeltiefe aus dem mit einer anderen REMO-Version gekoppelten Vegetationsmodul iMOVE verwendet, da zuk{\"u}nftig eine Kopplung dieses Moduls mit dem mehrschichtigen Boden geplant ist und die Wurzeltiefen damit konsistent sind. Zudem ist die zugrundeliegende Aufl{\"o}sung der Daten hoch und es werden maximale Wurzeltiefen ber{\"u}cksichtigt, die besonders wichtig f{\"u}r die Simulation von Landoberfl{\"a}che-Atmosph{\"a}re-Interaktionen sind. Diese Vorteile brachten die anderen Datens{\"a}tze nicht mit. In der finalen Modellversion werden f{\"u}r die Tiefe bis zum anstehenden Gestein und die Korngr{\"o}ßenverteilungen die Daten von SoilGrids verwendet. Ein Vergleich mit anderen Bodendatens{\"a}tzen fand in einer parallel laufenden Dissertation statt (Ziegler 2022). Bei SoilGrids ist hervorzuheben, dass die Korngr{\"o}ßenverteilungen in einer hohen r{\"a}umlichen Aufl{\"o}sung (1 km^2 oder h{\"o}her) und mit mehreren vertikalen Schichten vorliegen. Gegen{\"u}ber dem urspr{\"u}nglich in REMO verwendeten Datensatz mit einer Kantenl{\"a}nge von 0.5° und ohne vertikale Differenzierung ist dies eine starke Verbesserung der Eingangsdaten. Dazu kommt, dass die Korngr{\"o}ßenverteilungen die Verwendung kontinuierlicher Pedotransferfunktionen statt f{\"u}nf diskreter Texturklassen, denen f{\"u}r die bodenhydrologischen Parameter fixe Tabellenwerte zugewiesen werden, erm{\"o}glichen. Dies f{\"u}hrt zu einer deutlich besseren Differenzierung des heterogenen Bodens. Im Rahmen der Arbeit wurden insgesamt 19 Simulationen f{\"u}r Europa und ein erweitertes Deutschlandgebiet mit Aufl{\"o}sungen von 0.44° beziehungsweise 0.11° f{\"u}r den Zeitraum 2000 bis 2018 gerechnet. Dabei zeigte sich, dass die Einf{\"u}hrung des mehrschichtigen Bodenschemas gegen{\"u}ber dem einschichtigen Schema zu einer Verringerung der Bodenfeuchte in der Wurzeltiefe f{\"u}hrt. Nichtsdestotrotz nimmt die absolute Wassermenge des Bodens durch die Ber{\"u}cksichtigung des Bodens unterhalb der Wurzelzone zu. Bezogen auf die einzelnen Schichten wird die Bodenfeuchte damit zwar untersch{\"a}tzt, im Laufe der Modellentwicklung kann jedoch eine Verbesserung im Vergleich zu ERA5 erzielt werden. Das neue Schema f{\"u}hrt zu einer Verringerung der Evapotranspiration, die {\"u}ber alle Schritte der Modellentwicklung und besonders w{\"a}hrend der Sommermonate auftritt. Im Vergleich zu Validationsdaten von ERA5 und GLEAM zeigt sich, dass dies eine Verbesserung dieser Gr{\"o}ße bedeutet, die sowohl in der Fl{\"a}che als auch beim Fehler und in der Verteilung auftritt. Gleiches l{\"a}sst sich f{\"u}r den Oberfl{\"a}chenabfluss sagen. Hierf{\"u}r implementierte Schemata (Philip, Green-Ampt), die anders als das standardm{\"a}ßig verwendete Improved-Arno-Schema bodenhydrologische Parameter ber{\"u}cksichtigen, konnten eine weitere Verbesserung im Flachland zeigen. In Gebirgsregionen nahm der Fehler durch die nicht enthaltene Ber{\"u}cksichtigung der Hangneigung jedoch zu, sodass in der finalen Modellversion auf das Improved-Arno-Schema zur{\"u}ckgegriffen wurde. Die Temperatur steigt durch die urspr{\"u}ngliche Version des mehrschichtigen Schemas zun{\"a}chst an, was zu einer {\"U}ber- statt der vorherigen Untersch{\"a}tzung gegen{\"u}ber E-OBS f{\"u}hrt. Die Modellentwicklung resultiert zwar in einer Reduzierung der Temperatur, jedoch f{\"a}llt diese zu stark aus, sodass der Temperaturfehler letztendlich gr{\"o}ßer als in der einschichtigen Modellversion ist. Da die Evapotranspiration jedoch maßgeblich verbessert wurde, kann dieser Fehler eventuell auf ein {\"u}berm{\"a}ßiges Tuning der Temperatur zur{\"u}ckgef{\"u}hrt werden. Die Betrachtung von Hitzeereignissen am Beispiel der Sommer 2003 und 2018 hat gezeigt, dass die Modellentwicklung dazu beitr{\"a}gt, diese Ereignisse besser als das einschichtige Schema zu simulieren. Zwar trifft dies nicht auf das r{\"a}umliche Verhalten der mittleren Temperatur zu, jedoch auf deren zeitlichen Verlauf. Hinzu kommt die bessere Simulation der t{\"a}glichen Extrem- und besonders der Minimaltemperatur, was zu einer Erh{\"o}hung der t{\"a}glichen Temperaturspanne f{\"u}hrt. Diese wird von Klimamodellen in der Regel zu stark untersch{\"a}tzt. Durch die Ber{\"u}cksichtigung der vertikalen Wasserfl{\"u}sse hat sich jedoch auch gezeigt, dass noch enormes Entwicklungspotenzial mit Blick auf (boden)hydrologische Prozesse besteht. Dies gilt in besonderem Maße f{\"u}r zuk{\"u}nftige Simulationen mit konvektionserlaubender Aufl{\"o}sung. So sollten subskalige Informationen des Bodens und der Orographie ber{\"u}cksichtigt werden. Dies dient einerseits der Repr{\"a}sentation vorliegender Heterogenit{\"a}ten und kann andererseits, wie am Beispiel der Infiltrationsschemata dargelegt, zur Verbesserung bestehender Prozesse beitragen. Da die simulierte Drainage durch das mehrschichtige Bodenschema im gleichen Maße zu- wie der Oberfl{\"a}chenabfluss abnimmt und das Wasser dem Modell in der Folge nicht weiter zur Verf{\"u}gung steht, sollte zuk{\"u}nftig auch Grundwasser im Modell ber{\"u}cksichtigt werden. Eine Vielzahl von Studien konnte einen Mehrwert durch die Implementierung dieser Variable und damit verbundener Prozesse feststellen. Mittelfristig ist jedoch insgesamt die Kopplung an ein hydrologisches Modell zu empfehlen, um die bei hochaufl{\"o}senden Simulationen relevanten Prozesse angemessen repr{\"a}sentieren zu k{\"o}nnen. Hierf{\"u}r bieten sich beispielsweise ParFlow oder mHM an. Insgesamt ist festzuhalten, dass das mehrschichtige Bodenschema einen Mehrwert liefert, da schwer zu simulierende und in der Postprozessierung zu korrigierende Variablen wie die Evapotranspiration und der Oberfl{\"a}chenabfluss deutlich besser modelliert werden k{\"o}nnen als mit dem einschichtigen Schema. Dies gilt auch f{\"u}r die Extremtemperaturen. Beides ist klar auf die Schichtung des Bodens und damit einhergehender Prozesse zur{\"u}ckzuf{\"u}hren. Bez{\"u}glich der Daten zeigt sich, dass die Wurzeltiefe, die Ber{\"u}cksichtigung von SoilGrids und die vertikale Bodeninformation f{\"u}r die weitere Optimierung verantwortlich sind. Dar{\"u}ber hinaus ist der h{\"o}here Informationsgehalt, der anhand der geschichteten Bodenfeuchte zur Verf{\"u}gung steht, ebenfalls als Mehrwert einzustufen.}, subject = {Klima}, language = {de} } @phdthesis{Imam2023, author = {Imam, Nasir}, title = {Molecular basis of collybistin conformational activation}, doi = {10.25972/OPUS-31145}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-311458}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {The nervous system relies on an orchestrated assembly of complex cellular entities called neurons, which are specifically committed to information management and transmission. Inter-neuronal communication takes place via synapses, membrane-membrane junctions which ensure efficient signal transfer. Synaptic neurotransmission involves release of presynaptic neurotransmitters and their reception by cognate receptors at postsynaptic terminals. Inhibitory neurotransmission is primarily mediated by the release of neurotransmitters GABA (γ-Aminobutyric acid) and glycine, which are precisely sensed by GABA type-A receptors (GABAARs) and glycine receptors (GlyRs), respectively. GABAAR assembly and maintenance is coordinated by various postsynaptic neuronal factors including the scaffolding protein gephyrin, the neuronal adaptor collybistin (CB) and cell adhesion proteins of the neuroligin (NL) family, specifically NL2 and NL4. At inhibitory postsynaptic specializations, gephyrin has been hypothesized to form extended structures underneath the plasma membrane, where its interaction with the receptors leads to their stabilization and impedes their lateral movement. Gephyrin mutations have been associated with various brain disorders, including autism, schizophrenia, Alzheimer's disease, and epilepsy. Furthermore, gephyrin loss is lethal and causes mice to die within the first post-natal day. Gephyrin recruitment from intracellular deposits to postsynaptic membranes primarily relies on the adaptor protein CB. As a moonlighting protein, CB, a guanine nucleotide exchange factor (GEF), also catalyzes a nucleotide exchange reaction, thereby regenerating the GTP-bound state of the small GTPase Cdc42 from its GDP-bound form. The CB gene undergoes alternative splicing with the majority of CB splice variants featuring an N-terminal SH3 domain followed by tandem Dbl-homology (DH) and pleckstrin-homology (PH) domains. Previous studies demonstrated that the most widely expressed, SH3-domain containing splice variant (CB2SH3+) preferentially adopts a closed conformation, in which the N-terminally located SH3 domain forms intra-molecular interaction with the DH-PH domain tandem. Previous cell-based studies indicated that SH3 domain-encoding CB variants remain untargeted and colocalize with intracellular gephyrin deposits and hence require additional factors which interact with the SH3 domain, thus inducing an open or active conformation. The SH3 domain-deficient CB isoform (CB2SH3-), on the contrary, adopts an open conformation, which possess enhanced postsynaptic gephyrin-clustering and also effectively replenishes the GTP-bound small GTPase-Cdc42 from its GDP-bound state. Despite the fundamental role of CB as a neuronal adaptor protein maintaining the proper function of inhibitory GABAergic synapses, its interactions with the neuronal scaffolding protein gephyrin and other post synaptic neuronal factors remain poorly understood. Moreover, CB interaction studies with the small GTPase Cdc42 and TC10, a closely related member of Cdc42 subfamily, remains poorly characterized. Most importantly, the roles of the neuronal factors and small GTPases in CB conformational activation have not been elucidated. This PhD dissertation primarily focuses on delineating the molecular basis of the interactions between CB and postsynaptic neuronal factors. During the course of my PhD dissertation, I engineered a series of CB FRET (F{\"o}rster Resonance Energy Transfer) sensors to characterize the CB interaction with its binding partners along with outlining their role in CB conformational activation. Through the aid of these CB FRET sensors, I analyzed the gephyrin-CB interaction, which, due to technical limitations remained unaddressed for more than two decades (refer Chapter 2 for more details). Subsequently, I also unraveled the molecular basis of the interactions between CB and the neuronal cell adhesion factor neuroligin 2 (refer chapter 2) and the small GTPases Cdc42 and TC10 (refer chapter 3) and describe how these binding partners induce a conformational activation of CB. In summary, this PhD dissertation provides strong evidence of a closely knit CB communication network with gephyrin, neuroligin and the small GTPase TC10, wherein CB activation from closed/inactive to open/active states is effectively triggered by these ligands.}, language = {en} } @misc{Zhang2023, type = {Master Thesis}, author = {Zhang, Shenxishuai}, title = {Conflicts and Anxieties over Money in Late Ming Vernacular Stories}, doi = {10.25972/OPUS-31673}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-316733}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {The present study discusses money and conflicts and anxiety over money in late Ming vernacular stories and contextualizes these stories in the contemporary society of economic prosperity and rapid changes. The high monetization and extensive use of silver and copper cash as currency brought both wealth and conflicts in various aspects of society. Eleven vernacular stories from several collections are adopted as source materials for the close examination, including Jingshi tongyan (Stories to Caution the World, 1624) and Xingshi hengyan (Stories to Awaken the World, 1627) by Feng Menglong (1574-1646) and the two Pai'an jingqi (Slapping the Table in Amazement, 1628 and 1632) collections by Ling Mengchu (1580-1644), etc. The analysis then focuses on the relationship between money and four topics, the late Ming context, social relations, gender ideals, and religion. Multiple voices and various viewpoints in these narratives show human beings' struggles in taming and dominating money, the increasingly familiar and essential object in everyday life. Generally, when people cannot control money properly, there is a fear of its detrimental power to humans and social relations within and beyond families. On the contrary, characters, who are able to control money, are praised.}, subject = {Geld}, language = {en} } @incollection{Schoenfeld2023, author = {Sch{\"o}nfeld, Sophie}, title = {Western Constructions of Disability and Local Systems of Knowledge: A Look at the Problematic Aspects of Intercultural Work}, series = {Global Cultural Studies? Engaged Scholarship between National and Transnational Frames}, booktitle = {Global Cultural Studies? Engaged Scholarship between National and Transnational Frames}, editor = {Jetter, Tobias}, publisher = {W{\"u}rzburg University Press}, address = {W{\"u}rzburg}, doi = {10.25972/WUP-978-3-95826-207-2-113}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-305910}, publisher = {W{\"u}rzburg University Press}, pages = {113-128}, year = {2023}, abstract = {No abstract available.}, subject = {Behinderung}, language = {en} } @masterthesis{Schiffmann2023, type = {Bachelor Thesis}, author = {Schiffmann, Luisa}, title = {Medialer Konflikt um ein kulinarisches Kulturgut: Analyse des Diskurses zur Kimchi-/Paocai-Kontroverse in ausgew{\"a}hlten chinesischen und s{\"u}dkoreanischen Onlinezeitungen}, doi = {10.25972/OPUS-31191}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-311919}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Die vorliegende Arbeit analysiert die chinesisch-s{\"u}dkoreanische Kontroverse um die Herkunft von Kimchi (kimch'i 김치) beispielhaft f{\"u}r Dispute um kulturelle Eigenheiten anhand von Material aus Online-Medien. Mittels prim{\"a}r qualitativer und sekund{\"a}r auch quantitativer Methoden und einer wissenssoziologischen Diskursanalyse, die sich auf theoretische und methodische Konzepte von Agenda-Setting, Framing und Nationenbilder st{\"u}tzt, untersucht die Arbeit, welche Selbstbilder und Bilder des „Anderen" in englischsprachigen Berichten koreanischer und chinesischer Onlinezeitungen produziert werden. Besonders im Vordergrund stehen dabei die sprachlichen Mittel, argumentativen Strategien und diskursiven Praktiken, die bei der Darstellung der Ereignisse eingesetzt werden. Dabei erg{\"a}nzt die vorliegende Arbeit bisherige Forschung, die sich entweder auf die Metaebene bezieht oder aber ein nationales Publikum betrachtet, um die Perspektive des internationalen Publikums von Online-Medien. Die Untersuchung kommt zu dem Ergebnis, dass ein deutlicher Unterschied in der Agenda chinesischer und koreanischer Medien besteht, und zwar sowohl hinsichtlich der Inhalte, der Argumentationsstruktur, als auch des anvisierten Publikums.}, subject = {Diskursanalyse}, language = {de} } @book{AgbokhanSandigHaasetal.2023, author = {Agbokhan, Serena and Sandig, Anna and Haas, Thea and Valentin, Francesca and Gasteiger, Annika and von Keller, Anna and Friedmann, Fiona and Wicht, Rebecca and Wintermeyer, Nina and Hofmann, Anna-Lena and Liebich, Alexander and B{\"o}rdlein, Sophie and L{\"u}deritz, Cathrin and Philipp, Sonja and Watermann, Anne and Hercher, Anna}, title = {Insights;}, editor = {Nelson-Teutsch, Hannah}, isbn = {978-3-945459-44-7}, doi = {10.25972/OPUS-31700}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-317007}, publisher = {Universit{\"a}t W{\"u}rzburg}, pages = {99}, year = {2023}, abstract = {The cluster of texts assembled here were imagined, crafted, and brought together as a collaborative writing project that emerged from the seminar titled "Words Matter Worlds: Activist Scholarship and Literary Praxis," which convened over the course of the 2021/22 winter semester as an offering of the American Studies department of the Julius-Maximilians-Universit{\"a}t W{\"u}rzburg. Like the seminar that nurtured the considerations that evolve here, these contributions engage with how scholarly writing practices in general, and literary and cultural studies in particular, can remake the world.}, subject = {Aktivist}, language = {en} } @phdthesis{Rudingsdorfer2023, author = {Rudingsdorfer, Jonathan}, title = {Zur Leistungsrelevanz des situativen Flow-Erlebens bei Nachwuchsfußballerinnen}, doi = {10.25972/OPUS-30275}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-302752}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Die Arbeit untersucht die Leistungsrelevanz allgemeiner psychischer Leistungsfaktoren im Kontext der Talentf{\"o}rderung im weiblichen Nachwuchsfußball. Hierbei werden die Zusam- menh{\"a}nge zwischen drei psychischen Dispositionen sowie einem psychischen Zustand und der aktuellen Spielkompetenz untersucht, wobei folgende Leistungsfaktoren fokussiert werden: die dispositionelle Handlungsorientierung, die dispositionelle Lageorientierung, die grunds{\"a}tzliche Entscheidungskompetenz sowie das situative Flow-Erleben. Auf Grundlage der Flow-Theorie und der Theorie der Handlungskontrolle sowie dem aktu- ellen Forschungsstand wird angenommen, dass mit steigendem Flow-Erleben eine Zunahme der aktuellen Spielkompetenz einhergeht und dieser psychische Zustand zudem den Zusam- menhang zwischen den ausgew{\"a}hlten Dispositionen und der aktuellen Spielkompetenz voll- st{\"a}ndig vermittelt. Die beiden Theorien und der aktuelle Forschungsstand lassen f{\"u}r eine aus- gepr{\"a}gte dispositionelle Handlungsorientierung sowie eine hohe Entscheidungskompetenz eine Zunahme und f{\"u}r eine ausgepr{\"a}gte dispositionelle Lageorientierung eine Abnahme des Flow- Erlebens vermuten. Die Zusammenh{\"a}nge werden mit und ohne vorheriger Stressinduktion und unter Ber{\"u}cksichtigung theoretisch abgeleiteter Kontrollvariablen untersucht. Der Arbeit liegt eine quantitative Querschnittsstudie zugrunde, die bei 139 Nachwuchsspie- lerinnen aus acht verschiedenen Vereinen in Deutschland durchgef{\"u}hrt wurde. Die Datenaus- wertung erfolgt mittels multipler linearer Regressionsanalysen und linearer Strukturgleichungs- modelle. Das Flow-Erleben erweist sich als leistungsf{\"o}rderlicher Zustand und verl{\"a}sslicher Mediator des Zusammenhangs zwischen beiden dispositionellen Arten der Handlungskontrolle und der Spielkompetenz. Die dispositionelle Handlungsorientierung stellt einen positiven und die dis- positionelle Lageorientierung einen negativen Pr{\"a}diktor f{\"u}r das Flow-Erleben dar. In Bezug auf die Entscheidungskompetenz k{\"o}nnen die theoretischen Annahmen nicht best{\"a}tigt werden. Auf dieser Grundlage erfolgen Implikationen f{\"u}r die sportp{\"a}dagogische Praxis und die zuk{\"u}nftige Forschungsarbeit zum Flow-Erleben im weiblichen Nachwuchsfußball.}, subject = {Talentf{\"o}rderung}, language = {de} } @phdthesis{Schardt2023, author = {Schardt, Simon}, title = {Agent-based modeling of cell differentiation in mouse ICM organoids}, doi = {10.25972/OPUS-30194}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301940}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Mammalian embryonic development is subject to complex biological relationships that need to be understood. However, before the whole structure of development can be put together, the individual building blocks must first be understood in more detail. One of these building blocks is the second cell fate decision and describes the differentiation of cells of the inner cell mass of the embryo into epiblast and primitive endoderm cells. These cells then spatially segregate and form the subsequent bases for the embryo and yolk sac, respectively. In organoids of the inner cell mass, these two types of progenitor cells are also observed to form, and to some extent to spatially separate. This work has been devoted to these phenomena over the past three years. Plenty of studies already provide some insights into the basic mechanics of this cell differentiation, such that the first signs of epiblast and primitive endoderm differentiation, are the expression levels of transcription factors NANOG and GATA6. Here, cells with low expression of GATA6 and high expression of NANOG adopt the epiblast fate. If the expressions are reversed, a primitive endoderm cell is formed. Regarding the spatial segregation of the two cell types, it is not yet clear what mechanism leads to this. A common hypothesis suggests the differential adhesion of cell as the cause for the spatial rearrangement of cells. In this thesis however, the possibility of a global cell-cell communication is investigated. The approach chosen to study these phenomena follows the motto "mathematics is biology's next microscope". Mathematical modeling is used to transform the central gene regulatory network at the heart of this work into a system of equations that allows us to describe the temporal evolution of NANOG and GATA6 under the influence of an external signal. Special attention is paid to the derivation of new models using methods of statistical mechanics, as well as the comparison with existing models. After a detailed stability analysis the advantages of the derived model become clear by the fact that an exact relationship of the model parameters and the formation of heterogeneous mixtures of two cell types was found. Thus, the model can be easily controlled and the proportions of the resulting cell types can be estimated in advance. This mathematical model is also combined with a mechanism for global cell-cell communication, as well as a model for the growth of an organoid. It is shown that the global cell-cell communication is able to unify the formation of checkerboard patterns as well as engulfing patterns based on differently propagating signals. In addition, the influence of cell division and thus organoid growth on pattern formation is studied in detail. It is shown that this is able to contribute to the formation of clusters and, as a consequence, to breathe some randomness into otherwise perfectly sorted patterns.}, subject = {Mathematische Modellierung}, language = {en} } @phdthesis{Stahlhut2023, author = {Stahlhut, Philipp}, title = {Konzeption und Aufbau einer Nanofokus Labor CT Anlage in Reflexionsgeometrie auf Basis eines Rasterelektronenmikroskops}, doi = {10.25972/OPUS-30264}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-302648}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {In der vorliegenden Arbeit werden die Konzeption und Realisierung eines Computertomographen zur Materialanalyse auf Basis eines Rasterelektronenmikroskops mit einem r{\"a}umlichen Aufl{\"o}sungsverm{\"o}gen im Nanometerbereich diskutiert. Durch einen fokussierten Elektronenstrahl, der mit einer Beschleunigungsspannung von 30 kV auf eine mikrostrukturierte Wolframnadel mit einem Spitzenradius von bis zu 50 nm gezielt wird, entsteht ein kleiner R{\"o}ntgenbrennfleck {\"u}ber den mit geometrischer Vergr{\"o}ßerung hochaufl{\"o}sende Projektionen eines zu untersuchenden Objekts erzeugt werden. Durch Rotation des Testobjekts werden Projektionen aus verschiedenen Blickwinkeln aufgenommen und {\"u}ber einen speziellen Rekonstruktionsalgorithmus zu einem 3-dimensionalen Bild zusammengef{\"u}gt. Bei der Beurteilung der Einzelkomponenten des Ger{\"a}ts wird insbesondere auf Struktur, Form und den elektrochemischen Herstellungsprozess der R{\"o}ntgenquelle eingegangen. Eine ausreichend genaue Positionierung von Messobjekt und R{\"o}ntgenbrennfleck wird {\"u}ber Piezoachsen realisiert, w{\"a}hrend die Stabilit{\"a}t des R{\"o}ntgenbrennflecks {\"u}ber die Elektronenoptik des Rasterelektronenmikroskops und die Form der Quellnadel optimiert wird. Das r{\"a}umliche Aufl{\"o}sungsverm{\"o}gen wird {\"u}ber die Linienspreizfunktion an Materialkanten abgesch{\"a}tzt. F{\"u}r eine Wolfram-Block-Quelle ergibt sich dabei ein Aufl{\"o}sungsverm{\"o}gen von 325 nm - 400 nm in 3D, w{\"a}hrend der Quellfleck einer Wolframnadel das Aufl{\"o}sungsverm{\"o}gen der Anlage auf 65 nm - 90 nm in 2D und 170 nm - 300 nm in 3D bei Messungen an einem AlCu29-Testobjekt anhebt. Außerdem werden die Auswirkungen der Phasenkontrastcharakteristik der R{\"o}ntgenquelle auf die rekonstruierten Bilder nach Anwendung eines Paganin-Filters diskutiert. Dabei zeigt sich, dass durch Anwendung des Filters ein verbessertes Signal-zu-Rausch-Verh{\"a}ltnis auf Kosten der r{\"a}umlichen Bildaufl{\"o}sung erzielt werden kann. Eine Vergleichsmessung mit einem kommerziell verf{\"u}gbaren R{\"o}ntgenmikroskop zeigt die St{\"a}rken des vorgestellten Systems bei Untersuchung von stark absorbierenden Messobjekten. Das kompakte Design erlaubt eine Weiterentwicklung in Richtung eines nanoCT-Moduls als Upgrade Option f{\"u}r Rasterelektronenmikroskope im Gegensatz zu den weitaus teureren bisher verbreiteten nanoCT-Ger{\"a}ten.}, subject = {Computertomographie}, language = {de} } @phdthesis{Schulte2023, author = {Schulte, Annemarie}, title = {\(In\) \(vitro\) reprogramming of glial cells from adult dorsal root ganglia into nociceptor-like neurons}, doi = {10.25972/OPUS-30311}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-303110}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Plexus injury often occurs after motor vehicle accidents and results in lifelong disability with severe neuropathic pain. Surgical treatment can partially restore motor functions, but sensory loss and neuropathic pain persist. Regenerative medicine concepts, such as cell replacement therapies for restoring dorsal root ganglia (DRG) function, set high expectations. However, up to now, it is unclear which DRG cell types are affected by nerve injury and can be targeted in regenerative medicine approaches. This study followed the hypothesis that satellite glial cells (SGCs) might be a suitable endogenous cell source for regenerative medicine concepts in the DRG. SGCs originate from the same neural crest-derived cell lineage as sensory neurons, making them attractive for neural repair strategies in the peripheral nervous system. Our hypothesis was investigated on three levels of experimentation. First, we asked whether adult SGCs have the potential of sensory neuron precursors and can be reprogrammed into sensory neurons in vitro. We found that adult mouse DRG harbor SGC-like cells that can still dedifferentiate into progenitor-like cells. Surprisingly, expression of the early developmental transcription factors Neurog1 and Neurog2 was sufficient to induce neuronal and glial cell phenotypes. In the presence of nerve growth factor, induced neurons developed a nociceptor-like phenotype expressing functional nociceptor markers, such as the ion channels TrpA1, TrpV1 and NaV1.9. In a second set of experiments, we used a rat model for peripheral nerve injury to look for changes in the DRG cell composition. Using an unbiased deep learning-based approach for cell analysis, we found that cellular plasticity responses after nerve injury activate SGCs in the whole DRG. However, neither injury-induced neuronal death nor gliosis was observed. Finally, we asked whether a severe nerve injury changed the cell composition in the human DRG. For this, a cohort of 13 patients with brachial plexus injury was investigated. Surprisingly, in about half of all patients, the injury-affected DRG showed no characteristic DRG tissue. The complete entity of neurons, satellite cells, and axons was lost and fully replaced by mesodermal/connective tissue. In the other half of the patients, the basic cellular entity of the DRG was well preserved. Objective deep learning-based analysis of large-scale bioimages of the "intact" DRG showed no loss of neurons and no signs of gliosis. This study suggests that concepts for regenerative medicine for restoring DRG function need at least two translational research directions: reafferentation of existing DRG units or full replacement of the entire multicellular DRG structure. For DRG replacement, SGCs of the adult DRG are an attractive endogenous cell source, as the multicellular DRG units could possibly be rebuilt by transdifferentiating neural crest-derived sensory progenitor cells into peripheral sensory neurons and glial cells using Neurog1 and Neurog2.}, subject = {Spinalganglion}, language = {en} } @phdthesis{WeidergebOswald2023, author = {Weider [geb. Oswald], Margareta}, title = {Mundgesundheit von Hypophosphatasie-Patienten und Gendefekttr{\"a}gern - eine patientenorientierte Querschnittsstudie}, doi = {10.25972/OPUS-30278}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-302781}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Diese Studie evaluiert die Mundgesundheit von Hypophosphatasie (HPP)-Patienten und beinhaltet die Untersuchungen folgender Kenngr{\"o}ßen: erster Milchzahnverlust, Anzahl fehlender Z{\"a}hne, DMF/T-Index (Kari{\"o}s/Fehlend/Gef{\"u}llt), Blutung auf Sondierung (BOP), Sondierungstiefen (PPD), klinisches Attachmentniveau (CAL), Zahnlockerungen und kombinierter CDC/AAP Parodontal-Index. Die Daten wurden zwischen HHP-Patienten mit einer und zwei Mutationen auf dem f{\"u}r die alkalische Phosphatase kodierenden Genabschnitt (ALPL-Gen), sowie mit den Ergebnissen der DMS V verglichen, welche die Mundgesundheit der deutschen Allgemeinbev{\"o}lkerung repr{\"a}sentiert. 80 Patienten wurden untersucht; 64 von ihnen waren weiblich, 18 m{\"a}nnlich. Das Mittlere Alter lag bei 46,4 Jahren. 55 Studienteilnehmer wiesen eine Mutation und 18 zwei Mutationen des ALPL-Gens auf (n=7 keine Testung). Patienten, die von zwei Mutationen des f{\"u}r die alkalische Phosphatase kodierenden Genabschnitts betroffen waren, zeigten ein h{\"o}heres Risiko f{\"u}r Parodontitis und Zahnverlust als HPP-Patienten mit nur einer Mutation, sowie im Vergleich mit der deutschen Allgemeinbev{\"o}lkerung. Allerdings stiegen auch bei Patienten mit nur einer Mutation mit zunehmendem Lebensalter die Auspr{\"a}gungen parodontaler Erkrankungen, sowie die Zahnverlustrate im Vergleich zur Durchschnittsbev{\"o}lkerung in Deutschland.}, subject = {Hypophosphatasie}, language = {de} } @phdthesis{Hartmann2023, author = {Hartmann, Sebastian Erich}, title = {Mobbing und Straining im {\"o}ffentlichen Dienst : Eine rechtliche W{\"u}rdigung juristisch vernachl{\"a}ssigter, aber real existenter Ph{\"a}nomene}, doi = {10.25972/OPUS-31672}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-316724}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Mobbing und Straining sind Ph{\"a}nomene, die in Deutschland bislang kaum rechtliche Beachtung erfahren haben, obgleich sie real existieren, eine Vielzahl von Personen betreffen und immense wirtschaftliche Sch{\"a}den verursachen. So begegnet man diesen Ph{\"a}nomenen zuweilen mit allgemeinen Rechtsinstrumenten, was eine Herausforderung darstellt und mitunter an Grenzen st{\"o}ßt. Im ersten Teil der Arbeit wird ein umfassender {\"U}berblick dar{\"u}ber gegeben, welche Anspr{\"u}che in Betracht kommen und welche rechtlichen M{\"o}glichkeiten f{\"u}r betroffene Personen bestehen. In einer systematischen Darstellung wird aufgezeigt, wie reale Lebensvorg{\"a}nge im Kontext von Mobbing und Straining unter bestehende Rechtsvorschriften subsumiert werden k{\"o}nnen. Im Fokus steht insbesondere der Bereich des {\"o}ffentlichen Dienstes, der aufgrund seiner speziellen Rahmenbedingungen vielfach rechtliche und tats{\"a}chliche Besonderheiten aufweist, die es zu ber{\"u}cksichtigen gilt, wie etwa die Amtshaftung. Neben der rechtlichen Aufarbeitung h{\"a}lt der zweite Teil der Arbeit eine deutschlandweite Studie mit rund 2.300 Teilnehmenden zum Thema Straining und Mobbing im {\"o}ffentlichen Dienst bereit, deren Ergebnisse erstmalig Aussagen und R{\"u}ckschl{\"u}sse zum Strainingaufkommen in Deutschland zulassen. Ferner liefert die umfassende empirische Untersuchung vertiefte Erkenntnisse zur Existenz und Bedeutung der Ph{\"a}nomene Straining und Mobbing im Kontext des {\"o}ffentlichen Dienstes.}, subject = {Mobbing}, language = {de} } @article{WeibelPoppReisetal.2023, author = {Weibel, Stephanie and Popp, Maria and Reis, Stefanie and Skoetz, Nicole and Garner, Paul and Sydenham, Emma}, title = {Identifying and managing problematic trials: A research integrity assessment tool for randomized controlled trials in evidence synthesis}, series = {Research Synthesis Methods}, volume = {14}, journal = {Research Synthesis Methods}, number = {3}, doi = {10.1002/jrsm.1599}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-318236}, pages = {357 -- 369}, year = {2023}, abstract = {Evidence synthesis findings depend on the assumption that the included studies follow good clinical practice and results are not fabricated or false. Studies which are problematic due to scientific misconduct, poor research practice, or honest error may distort evidence synthesis findings. Authors of evidence synthesis need transparent mechanisms to identify and manage problematic studies to avoid misleading findings. As evidence synthesis authors of the Cochrane COVID-19 review on ivermectin, we identified many problematic studies in terms of research integrity and regulatory compliance. Through iterative discussion, we developed a research integrity assessment (RIA) tool for randomized controlled trials for the update of this Cochrane review. In this paper, we explain the rationale and application of the RIA tool in this case study. RIA assesses six study criteria: study retraction, prospective trial registration, adequate ethics approval, author group, plausibility of methods (e.g., randomization), and plausibility of study results. RIA was used in the Cochrane review as part of the eligibility check during screening of potentially eligible studies. Problematic studies were excluded and studies with open questions were held in awaiting classification until clarified. RIA decisions were made independently by two authors and reported transparently. Using the RIA tool resulted in the exclusion of >40\% of studies in the first update of the review. RIA is a complementary tool prior to assessing "Risk of Bias" aiming to establish the integrity and authenticity of studies. RIA provides a platform for urgent development of a standard approach to identifying and managing problematic studies.}, language = {en} } @article{BellutBieberKraftetal.2023, author = {Bellut, Maximilian and Bieber, Michael and Kraft, Peter and Weber, Alexander N. R. and Stoll, Guido and Schuhmann, Michael K.}, title = {Delayed NLRP3 inflammasome inhibition ameliorates subacute stroke progression in mice}, series = {Journal of Neuroinflammation}, volume = {20}, journal = {Journal of Neuroinflammation}, number = {1}, doi = {10.1186/s12974-022-02674-w}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-300599}, year = {2023}, abstract = {Background Ischemic stroke immediately evokes a strong neuro-inflammatory response within the vascular compartment, which contributes to primary infarct development under vessel occlusion as well as further infarct growth despite recanalization, referred to as ischemia/reperfusion injury. Later, in the subacute phase of stroke (beyond day 1 after recanalization), further inflammatory processes within the brain parenchyma follow. Whether this second wave of parenchymal inflammation contributes to an additional/secondary increase in infarct volumes and bears the potential to be pharmacologically targeted remains elusive. We addressed the role of the NLR-family pyrin domain-containing protein 3 (NLRP3) inflammasome in the subacute phase of ischemic stroke. Methods Focal cerebral ischemia was induced in C57Bl/6 mice by a 30-min transient middle cerebral artery occlusion (tMCAO). Animals were treated with the NLRP3 inhibitor MCC950 therapeutically 24 h after or prophylactically before tMCAO. Stroke outcome, including infarct size and functional deficits as well as the local inflammatory response, was assessed on day 7 after tMCAO. Results Infarct sizes on day 7 after tMCAO decreased about 35\% after delayed and about 60\% after prophylactic NLRP3 inhibition compared to vehicle. Functionally, pharmacological inhibition of NLRP3 mitigated the local inflammatory response in the ischemic brain as indicated by reduction of infiltrating immune cells and reactive astrogliosis. Conclusions Our results demonstrate that the NLRP3 inflammasome continues to drive neuroinflammation within the subacute stroke phase. NLRP3 inflammasome inhibition leads to a better long-term outcome—even when administered with a delay of 1 day after stroke induction, indicating ongoing inflammation-driven infarct progression. These findings may pave the way for eagerly awaited delayed treatment options in ischemic stroke.}, language = {en} } @phdthesis{Saulin2023, author = {Saulin, Anne Christin}, title = {Sustainability of empathy as driver for prosocial behavior and social closeness: insights from computational modelling and functional magnetic resonance imaging}, doi = {10.25972/OPUS-30555}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-305550}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Empathy, the act of sharing another person's affective state, is a ubiquitous driver for helping others and feeling close to them. These experiences are integral parts of human behavior and society. The studies presented in this dissertation aimed to investigate the sustainability and stability of social closeness and prosocial decision-making driven by empathy and other social motives. In this vein, four studies were conducted in which behavioral and neural indicators of empathy sustainability were identified using model-based functional magnetic resonance imaging (fMRI). Applying reinforcement learning, drift-diffusion modelling (DDM), and fMRI, the first two studies were designed to investigate the formation and sustainability of empathy-related social closeness (study 1) and examined how sustainably empathy led to prosocial behavior (study 2). Using DDM and fMRI, the last two studies investigated how empathy combined with reciprocity, the social norm to return a favor, on the one hand and empathy combined with the motive of outcome maximization on the other hand altered the behavioral and neural social decision process. The results showed that empathy-related social closeness and prosocial decision tendencies persisted even if empathy was rarely reinforced. The sustainability of these empathy effects was related to recalibration of the empathy-related social closeness learning signal (study 1) and the maintenance of a prosocial decision bias (study 2). The findings of study 3 showed that empathy boosted the processing of reciprocity-based social decisions, but not vice versa. Study 4 revealed that empathy-related decisions were modulated by the motive of outcome maximization, depending on individual differences in state empathy. Together, the studies strongly support the concept of empathy as a sustainable driver of social closeness and prosocial behavior.}, subject = {Einf{\"u}hlung }, language = {en} } @phdthesis{Grimm2023, author = {Grimm, Philipp Martin}, title = {Locally driven complex plasmonic nanoantenna systems}, doi = {10.25972/OPUS-30315}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-303152}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Metallic nanostructures possess the ability to support resonances in the visible wavelength regime which are related to localized surface plasmons. These create highly enhanced electric fields in the immediate vicinity of metal surfaces. Nanoparticles with dipolar resonance also radiate efficiently into the far-field and hence serve as antennas for light. Such optical antennas have been explored during the last two decades, however, mainly as standalone units illuminated by external laser beams and more recently as electrically driven point sources, yet merely with basic antenna properties. This work advances the state of the art of locally driven optical antenna systems. As a first instance, the electric driving scheme including inelastic electron tunneling over a nanometer gap is merged with Yagi-Uda theory. The resulting antenna system consists of a suitably wired feed antenna, incorporating a tunnel junction, as well as several nearby parasitic elements whose geometry is optimized using analytical and numerical methods. Experimental evidence of unprecedented directionality of light emission from a nanoantenna is provided. Parallels in the performance between radiofrequency and optical Yagi-Uda arrays are drawn. Secondly, a pair of electrically connected antennas with dissimilar resonances is harnessed as electrodes in an organic light emitting nanodiode prototype. The organic material zinc phthalocyanine, exhibiting asymmetric injection barriers for electrons and holes, in conjunction with the electrode resonances, allows switching and controlling the emitted peak wavelength and directionality as the polarity of the applied voltage is inverted. In a final study, the near-field based transmission-line driving of rod antenna systems is thoroughly explored. Perfect impedance matching, corresponding to zero back-reflection, is achieved when the antenna acts as a generalized coherent perfect absorber at a specific frequency. It thus collects all guided, surface-plasmon mediated input power and transduces it to other nonradiative and radiative dissipation channels. The coherent interplay of losses and interference effects turns out to be of paramount importance for this delicate scenario, which is systematically obtained for various antenna resonances. By means of the here developed semi-analytical toolbox, even more complex nanorod chains, supporting topologically nontrivial localized edge states, are studied. The results presented in this work facilitate the design of complex locally driven antenna systems for optical wireless on-chip communication, subwavelength pixels, and loss-compensated integrated plasmonic nanocircuitry which extends to the realm of topological plasmonics.}, subject = {Plasmonik}, language = {en} } @phdthesis{Lichter2023, author = {Lichter, Katharina}, title = {Die Ultrastruktur von Aktiven Zonen in hippocampalen Moosfaserboutons}, doi = {10.25972/OPUS-30312}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-303126}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {In nervous systems, synapses precisely orchestrate information transfer and memory formation. Active zones (AZ) are specialized subcellular compartments at the presynaptic mesoscale which process synaptic transmission on an ultrastructural level. The AZ cytomatrix including the essential scaffold protein Rab3 interacting molecule (RIM) enables exocytosis of synaptic vesicles. A deficiency of the locally most abundant protein isoform RIM1α diminishes long-term potentiation in a complex central mammalian synapse - the connection of hippocampal mossy fiber boutons (MFB) to cornu ammonis (CA)3 pyramidal neurons. Behaviourally, these mice present with learning impairment. The present MD thesis addresses the so far unknown three-dimensional (3D) AZ ultrastructure of MFBs in acute hippocampal slices of wild-type and RIM1α-/- mice. In a first set of experiments, a standardized protocol for near-to-native synaptic tissue preparation at MFBs using high-pressure freezing and freeze substitution and 3D modelling using electron tomography was developed and established. Based on the excellent preservation of synaptic tissue using this protocol, the AZ ultrastructure in both genotypes was quantified in detail up to an individual docked synaptic vesicle using custom-written programming scripts. The experiments demonstrate that deficiency of RIM1α leads to multidimensional alter-ation of AZ 3D ultrastructure and synaptic vesicle pools in MFBs. (Tightly) docked synaptic vesicles - ultrastructural correlates of the readily releasable pool - are reduced, decentralized, and structurally modified, whereas the more distant vesicle pool clusters more densely above larger and more heterogenous AZ surfaces with higher synaptic clefts. The present thesis contributes to a more comprehensive understanding regarding the role of RIM1α for (tight) vesicle docking and organization at MFBs. Furthermore, the precise 3D ultrastructural analysis of MFB AZs in this thesis provides the necessary mor-phological basis for further studies to correlate synaptic ultrastructure with presynaptic plasticity and memory dysfunction in RIM1α-/- mice using advanced electrophysiological and behavioral techniques.}, subject = {Hippocampus}, language = {de} } @phdthesis{FetivaMora2023, author = {Fetiva Mora, Maria Camila}, title = {Changes in chromatin accessibility by oncogenic YAP and its relevance for regulation of cell cycle gene expression and cell migration}, doi = {10.25972/OPUS-30291}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-302910}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Various types of cancer involve aberrant cell cycle regulation. Among the pathways responsible for tumor growth, the YAP oncogene, a key downstream effector of the Hippo pathway, is responsible for oncogenic processes including cell proliferation, and metastasis by controlling the expression of cell cycle genes. In turn, the MMB multiprotein complex (which is formed when B-MYB binds to the MuvB core) is a master regulator of mitotic gene expression, which has also been associated with cancer. Previously, our laboratory identified a novel crosstalk between the MMB-complex and YAP. By binding to enhancers of MMB target genes and promoting B-MYB binding to promoters, YAP and MMB co-regulate a set of mitotic and cytokinetic target genes which promote cell proliferation. This doctoral thesis addresses the mechanisms of YAP and MMB mediated transcription, and it characterizes the role of YAP regulated enhancers in transcription of cell cycle genes. The results reported in this thesis indicate that expression of constitutively active, oncogenic YAP5SA leads to widespread changes in chromatin accessibility in untransformed human MCF10A cells. ATAC-seq identified that newly accessible and active regions include YAP-bound enhancers, while the MMB-bound promoters were found to be already accessible and remain open during YAP induction. By means of CRISPR-interference (CRISPRi) and chromatin immuniprecipitation (ChIP), we identified a role of YAP-bound enhancers in recruitment of CDK7 to MMB-regulated promoters and in RNA Pol II driven transcriptional initiation and elongation of G2/M genes. Moreover, by interfering with the YAP-B-MYB protein interaction, we can show that binding of YAP to B-MYB is also critical for the initiation of transcription at MMB-regulated genes. Unexpectedly, overexpression of YAP5SA also leads to less accessible chromatin regions or chromatin closing. Motif analysis revealed that the newly closed regions contain binding motifs for the p53 family of transcription factors. Interestingly, chromatin closing by YAP is linked to the reduced expression and loss of chromatin-binding of the p53 family member Np63. Furthermore, I demonstrate that downregulation of Np63 following expression of YAP is a key step in driving cellular migration. Together, the findings of this thesis provide insights into the role of YAP in the chromatin changes that contribute to the oncogenic activities of YAP. The overexpression of YAP5SA not only leads to the opening of chromatin at YAP-bound enhancers which together with the MMB complex stimulate the expression of G2/M genes, but also promotes the closing of chromatin at ∆Np63 -bound regions in order to lead to cell migration.}, subject = {Chromatin}, language = {en} } @phdthesis{Sauer2023, author = {Sauer, Christian}, title = {Development, Simulation and Evaluation of Mobile Wireless Networks in Industrial Applications}, doi = {10.25972/OPUS-29923}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-299238}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Manyindustrialautomationsolutionsusewirelesscommunicationandrelyontheavail- ability and quality of the wireless channel. At the same time the wireless medium is highly congested and guaranteeing the availability of wireless channels is becoming increasingly difficult. In this work we show, that ad-hoc networking solutions can be used to provide new communication channels and improve the performance of mobile automation systems. These ad-hoc networking solutions describe different communi- cation strategies, but avoid relying on network infrastructure by utilizing the Peer-to- Peer (P2P) channel between communicating entities. This work is a step towards the effective implementation of low-range communication technologies(e.g. VisibleLightCommunication(VLC), radarcommunication, mmWave communication) to the industrial application. Implementing infrastructure networks with these technologies is unrealistic, since the low communication range would neces- sitate a high number of Access Points (APs) to yield full coverage. However, ad-hoc networks do not require any network infrastructure. In this work different ad-hoc net- working solutions for the industrial use case are presented and tools and models for their examination are proposed. The main use case investigated in this work are Automated Guided Vehicles (AGVs) for industrial applications. These mobile devices drive throughout the factory trans- porting crates, goods or tools or assisting workers. In most implementations they must exchange data with a Central Control Unit (CCU) and between one another. Predicting if a certain communication technology is suitable for an application is very challenging since the applications and the resulting requirements are very heterogeneous. The proposed models and simulation tools enable the simulation of the complex inter- action of mobile robotic clients and a wireless communication network. The goal is to predict the characteristics of a networked AGV fleet. Theproposedtoolswereusedtoimplement, testandexaminedifferentad-hocnetwork- ing solutions for industrial applications using AGVs. These communication solutions handle time-critical and delay-tolerant communication. Additionally a control method for the AGVs is proposed, which optimizes the communication and in turn increases the transport performance of the AGV fleet. Therefore, this work provides not only tools for the further research of industrial ad-hoc system, but also first implementations of ad-hoc systems which address many of the most pressing issues in industrial applica- tions.}, subject = {Industrie}, language = {en} } @phdthesis{Hamann2023, author = {Hamann, Catharina Sophia}, title = {Fear and anxiety disorders - interaction of AVP and OXT brain systems with the serotonergic system}, doi = {10.25972/OPUS-30333}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-303338}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Anxiety disorders pose a great burden onto society and economy and can have devastating consequences for affected individuals. Treatment options are still limited to psychopharmacotherapy originally developed for the treatment of depression and behavioral therapy. A combination of genetic traits together with aversive events is most likely the cause of these diseases. Gene x environment studies are trying to find a link between genetic traits and specific negative circumstances. In a first study, we focused on social anxiety disorder (SAD), which is the second most-common anxiety disorder after specific phobias. We used a social fear conditioning (SFC) paradigm, which is able to mimic the disease in a mouse model. We wanted to investigate protein levels, as well as mRNA expression of immediate early genes (IEGs), to determine brain areas affected by the paradigm. We also included genes of the vasopressin (AVP)-, oxytocin (OXT)-, neuropeptide Y (NPY)-, and the serotonin system, to investigate the effects of SFC on neurotransmitter gene expression levels in brain regions related to social as well as fear-related behavior. AVP and OXT regulate a lot of different social and anxiety-related behaviors, both positive and negative. Finding a link between different neurotransmitter systems in the development of anxiety disorders could help to identify potential targets for new treatment approaches, which are desperately needed, because the rate of patients not responding to available treatment is very high. We were able to show altered gene expression of the IEGs cFos and Fosl2, as well as a change in number and density of cFOS-positive cells in the dorsal hippocampus, indicating an influence of SFC on neuronal activity. Our results reveal a possible involvement of anterior dentate gyrus (DG), as well as cornu ammonis area 1 (CA1) and CA3 in the dorsal hippocampus during the expression of social fear. Contrary to our hypothesis, we were not able to see changes in neuronal activity through expression changes of IEGs in the amygdala. Significant higher IEG immunoreactivity and gene expression in the dorsal hippocampus of animals without fear conditioning (SFC-), compared to animals with fear conditioning (SFC+), indicate an involvement of different hippocampal regions in two possible scenarios. Either as elevated gene expression in SFC- animals compared to SFC+ animals or as reduction in SFC+ animals compared to SFC- animals. However, this question cannot be answered without an additional control of basal IEG-activity without social interaction. The NPY system in general and the neuropeptide y receptor type 2 in particular seem to be involved in regulating the response to social fear, mostly through the septum region. In addition to that, a possible role for the induction of social fear response could be identified in the serotonergic system and especially the serotonin receptor 2a of the PVN. In a second study we focused on changes in the serotonergic system. A polymorphism in the human serotonin transporter (5-HTT) gene is associated with higher risks for the development of anxiety disorders. This makes the 5-HTT a widely used target to study possible causes and the development of anxiety disorders. In mice, a genetically induced knockout of the 5-Htt gene is associated with increased anxiety-like behavior. High amounts of stress during pregnancy, also known as prenatal stress, significantly increase the risk to develop psychiatric disorders for the unborn child. We utilized a prenatal stress paradigm in mice heterozygous for the 5-Htt gene. Some of the animals which had been subjected to prenatal stress showed noticeably "unsocial" interaction behavior towards conspecifics. Again, we were searching for links between the serotonergic system and AVP- and OXT systems. Through quantitative gene expression analysis, we were able to show that both AVP and OXT neuromodulator systems are affected through prenatal stress in female mice, but not in male mice. The 5-Htt genotype seems to be only slightly influential to AVP, OXT or any other neurotransmitter system investigated. Gene expression of AVP and OXT brain systems is highly influenced through the estrous cycle stages of female mice. Additionally, we analyzed the AVP and OXT neuropeptide levels of mice with different 5-Htt genotypes and in both sexes, in order to see whether the production of AVP and OXT is influenced by 5-Htt genotype. On neuropeptide level, we were able to identify a sex difference for vasopressin-immunoreactive (ir) cells in the PVN, with male mice harboring significantly more positive cells than female mice.}, subject = {Serotonin}, language = {en} } @phdthesis{Laesker2023, author = {L{\"a}sker, Katharina}, title = {The influence of the short-chain fatty acid butyrate on "Signal transducer and activator of transcription 3" (STAT3) and selected inflammatory genes in the colon carcinoma cell line CACO-2 cultured in 2D and 3D}, doi = {10.25972/OPUS-30038}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-300389}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {A disturbance in the symbiotic mutualism between the intestinal microbiome and the human host's organism (syn. dysbiosis) accompanies the development of a variety of inflammatory and metabolic diseases that comprise the Metabolic Syndrome, chronic inflammatory gut diseases like Crohn's disease, Non-alcoholic fatty liver disease (NAFLD) and cardiovascular diseases, among others. The changed uptake and effectiveness of short chain fatty acids (SCFAs) as well as an increase of the intestinal permeability are common, interdependent disease elements in this regard. Short chain fatty acids are end-products of intestinal bacterial fermentation and affect the mucosal barrier integrity via numerous molecular mechanisms. There is evidence to suggest, that SCFAs have a modulating influence on Signal transducer and activator of transcription 3 (STAT3) in intestinal epithelial cells. STAT3 is a central gene-transcription factor in signaling pathways of proliferation and inflammation. It can be activated by growth factors and other intercellular signaling molecules like the cytokine Oncostatin M (OSM). The mode of STAT3's activation exhibits, finally, a decisive influence on the immunological balance at the intestinal mucosa. Therefore, the posttranslational modification of STAT3 under the influence of SCFAs is likely to be a very important factor within the development and -progression of dysbiosis-associated diseases. In this study, a clear positive in vitro-effect of the short chain fatty acid butyrate on the posttranslational serine727-phosphorylation of STAT3 and its total protein amount in the human adenocarcinoma cell line CACO2 is verified. Moreover, an increased gene expression of the OSM-receptor subunit OSMRβ can be observed after butyrate incubation. Histone deacetylase inhibition is shown to have a predominant role in these effects. Furthermore, a subsequent p38 MAPK-activation by Butyrate is found to be a key molecular mechanism regarding the STAT3-phosphorylation at serine727-residues. To consider the portion of butyrate receptor signaling in this context in future assays, a CACO-2 cell 3D-culture model is introduced in which an improvement of the GPR109A-receptor expression in CACO-2 cells is accomplished.}, subject = {Butyrate }, language = {en} } @phdthesis{Aigner2023, author = {Aigner, Max}, title = {Establishing successful protocols and imaging pipelines for Expansion Microscopy in murine blood platelets}, doi = {10.25972/OPUS-30900}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-309003}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Platelets play an important role in the body, since they are part of the hemostasis system, preventing and stopping blood loss. Nevertheless, when platelet or coagulation system function are impaired, uncontrolled bleedings but also irreversible vessel occlusion followed by ischemic tissue damage can occur. Therefore, understanding platelet function and activation, mechanisms which are controlled by a variety of platelet membrane receptors and other factors is important to advance out knowledge of hemostasis and platelet malfunction. For a complete picture of platelet function and their modulating behavior it is desired to be able to quantify receptor distributions and interactions of these densely packed molecular ensembles in the membrane. This challenges scientists for several reasons. Most importantly, platelets are microscopically small objects, challenging the spatial resolution of conventional light microscopy. Moreover, platelet receptors are highly abundant on the membrane so even super-resolution microscopy struggles with quantitative receptor imaging on platelets. With Expansion microscopy (ExM), a new super-resolution technique was introduced, allowing resolutions to achieve super-resolution without using a super-resolution microscope, but by combining a conventional confocal microscopy with a highly processed sample that has been expanded physically. In this doctoral thesis, I evaluated the potential of this technique for super-resolution platelet imaging by optimizing the sample preparation process and establishing an imaging and image processing pipeline for dual-color 3D images of different membrane receptors. The analysis of receptor colocalization using ExM demonstrated a clear superiority compared to conventional microscopy. Furthermore, I identified a library of fluorescently labeled antibodies against different platelet receptors compatible with ExM and showed the possibility of staining membrane receptors and parts of the cytoskeleton at the same time.}, subject = {Mikroskopie}, language = {en} } @phdthesis{Heider2023, author = {Heider, Melanie}, title = {Detektionsrate der \(^{68}\)Ga-PSMA-PET/CT bei Patienten mit Rezidiv eines Prostatakarzinoms und Androgendeprivationstherapie}, doi = {10.25972/OPUS-30612}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-306123}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Die Detektion des Prostataspezifischen Membranantigens (PSMA) mittels kombinierter Positronenemissions- und Computertomographie (PET/CT) ist ein etabliertes diagnostisches Verfahren bei Patienten mit Prostatakarzinom. Hierbei ist bislang unklar, ob und wie eine bereits eingeleitete Androgendeprivationstherapie (ADT) die diagnostische Genauigkeit der PSMA-PET/CT beeinflusst. Ziel dieser Arbeit war es, die Detektionsrate der PSMA-PET/CT mit 68Ga-PSMA I\&T unter ADT in Abh{\"a}ngigkeit des PSA-Wertes zu evaluieren und mit einer Kontrollgruppe ohne ADT zu vergleichen. In dieser retrospektiven Studie wurden Daten von Patienten mit biochemischem Rezidiv nach radikaler Prostatektomie analysiert, welche zwischen 2014 und 2018 eine PSMA-PET/CT am Universit{\"a}tsklinikum W{\"u}rzburg erhalten haben. Mittels Propensity Score Matching wurde f{\"u}r die Patienten mit ADT innerhalb der letzten 6 Monate vor Durchf{\"u}hrung der PSMA-PET/CT eine Kontrollgruppe ohne ADT erstellt. Die Patienten mit ADT (n=62) wiesen eine signifikant h{\"o}here Detektionsrate auf als die Patienten ohne ADT (n=62). Die Traceranreicherung unterschied sich nicht signifikant in beiden Gruppen. Dagegen wiesen die Patienten mit ADT jedoch eine signifikant h{\"o}here Tumorlast auf und hatten h{\"a}ufiger Knochen- und Organmetastasen, sodass als Ursache f{\"u}r die h{\"o}here Detektionsrate der PSMA-PET/CT bei Patienten mit ADT ein fortgeschritteneres Tumorstadium angenommen wurde. Die Detektionsrate war bei den Patienten mit ADT auch bei niedrigen PSA-Werten hoch. Es scheint daher nicht erforderlich zu sein, eine bestehende ADT vor Durchf{\"u}hrung der PSMA-PET/CT im biochemischen Rezidiv abzusetzen und damit das Risiko einer Krankheitsprogression einzugehen. Die Korrelation des PSA-Wertes mit der Tumorlast in der PSMA-PET/CT war bei Patienten mit ADT geringer ausgepr{\"a}gt als bei Patienten ohne ADT. Patienten unter ADT k{\"o}nnten daher von einer regelm{\"a}ßigen Durchf{\"u}hrung der PSMA-PET/CT zur {\"U}berwachung der Krankheitsprogression profitieren. Hier bleibt allerdings eine Kosten-Nutzen-Analyse abzuwarten, da dies deutlich aufwendiger und teurer ist als die Bestimmung des PSA-Wertes.}, subject = {Positronen-Emissions-Tomografie}, language = {de} } @article{ParisiLehnerSchraderetal.2023, author = {Parisi, Sandra and Lehner, Nina and Schrader, Hanna and Kierer, Leonard and Fleischer, Anna and Miljukov, Olga and Borgulya, Gabor and R{\"u}ter, Gernot and Viniol, Annika and G{\´a}gyor, Ildik{\´o}}, title = {Experiencing COVID-19, home isolation and primary health care: A mixed-methods study}, series = {Frontiers in Public Health}, volume = {10}, journal = {Frontiers in Public Health}, issn = {2296-2565}, doi = {10.3389/fpubh.2022.1023431}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301498}, year = {2023}, abstract = {Objectives Although the vast majority of COVID-19 cases are treated in primary care, patients' experiences during home isolation have been little studied. This study aimed to explore the experiences of patients with acute COVID-19 and to identify challenges after the initial adaptation of the German health system to the pandemic (after first infection wave from February to June 2020). Methods A mixed-method convergent design was used to gain a holistic insight into patients experience. The study consisted of a cross-sectional survey, open survey answers and semi-structured telephone interviews. Descriptive analysis was performed on quantitative survey answers. Between group differences were calculated to explore changes after the first infection wave. Qualitative thematic analysis was conducted on open survey answers and interviews. The results were then compared within a triangulation protocol. Results A total of 1100 participants from all German states were recruited by 145 general practitioners from August 2020 to April 2021, 42 additionally took part in qualitative interviews. Disease onset varied from February 2020 to April 2021. After the first infection wave, more participants were tested positive during the acute disease (88.8\%; 95.2\%; P < 0.001). Waiting times for tests (mean 4.5 days, SD 4.1; 2.7days, SD 2.6, P < 0.001) and test results (mean 2.4 days, SD 1.9; 1.8 days, SD 1.3, P < 0.001) decreased. Qualitative results indicated that the availability of repeated testing and antigen tests reduced insecurities, transmission and related guilt. Although personal consultations at general practices increased (6.8\%; 15.5\%, P < 0.001), telephone consultation remained the main mode of consultation (78.5\%) and video remained insignificant (1.9\%). The course of disease, the living situation and social surroundings during isolation, access to health care, personal resilience, spirituality and feelings of guilt and worries emerged as themes influencing the illness experience. Challenges were contact management and adequate provision of care during home isolation. A constant contact person within the health system helped against feelings of care deprivation, uncertainty and fear. Conclusions Our study highlights that home isolation of individuals with COVID-19 requires a holistic approach that considers all aspects of patient care and effective coordination between different care providers.}, language = {en} } @phdthesis{Hennlein2023, author = {Hennlein, Luisa}, title = {Plastin 3 rescues defective cell surface translocation and activation of TrkB in mouse models for spinal muscular atrophy}, publisher = {Journal of Cell Biology}, doi = {10.25972/OPUS-29879}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-298793}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Spinal muscular atrophy (SMA) is a genetic pediatric condition that affects lower motoneurons leading to their degeneration and muscle weakness. It is caused by homozygous loss or mutations in the Survival Motor Neuron 1 (SMN1) gene; however, the pathomechanism leading to motoneuron degeneration is not fully resolved. Cultured embryonic SMA motoneurons display axon elongation and differentiation defects accompanied by collapsed growth cones with a disturbed actin cytoskeleton. Intriguingly, motoneurons cultured from mice deficient for the Tropomyosin-kinase receptor B (TrkB), exhibit similar pathological features. Thus, the question arises whether SMA motoneurons suffer from defective Brain-derived neurotrophic factor (BDNF)/TrkB signaling and whether there is a link to the disturbed actin cytoskeleton. In the recent years, modifier genes such as Plastin 3 (PLS3) were shown to beneficially interfere with SMA pathology. Nevertheless, the mechanism of how the actin-bundler PLS3 counteracts SMN deficiency is not well understood. In this study, we investigated TrkB localization and its activation in cultured SMA motoneurons and neuromuscular junctions (NMJs). While TrkB levels are only mildly affected locally in axon terminals, BDNF-mediated TrkB phosphorylation was massively disturbed. The activity-dependent TrkB translocation to the cell surface and its activation via BDNF were shown to be Pls3-dependent processes, that can be abolished by knockdown of Pls3. In contrast, PLS3 overexpression in SMA motoneurons rescued the defects on morphological and functional level. In particular, the relocation of TrkB to the cell surface after BDNF-induced internalization is disturbed in SMA, which is based on an actin-dependent TrkB translocation defect from intracellular stores. Lastly, AAV9-mediated PLS3 overexpression in vivo in neonatal SMA mice provided further evidence for the capacity of PLS3 to modulate actin dynamics necessary for accurate BDNF/TrkB signaling. In conclusion, we provide a novel role for PLS3 in mediating proper alignment of transmembrane proteins as prerequisite for their appropriate functioning. Hence, PLS3 is required for a key process indispensable for the development and function of motoneurons even beyond the context of SMA.}, subject = {Spinale Muskelatrophie}, language = {en} } @phdthesis{Jaud2023, author = {Jaud, Tobias Armin}, title = {Application based personalized food choices and health sustainment: scientific background and investigation of biomarkers in human tissue specimens}, doi = {10.25972/OPUS-29864}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-298646}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Dietary fatty acids serve as objective biomarkers for the estimation of habitual diet mainly because biomarkers are free of memory bias or inaccuracies of food databases. The aim of the present work encompassed the implementation of a gas chromatographical method coupled with a mass spectrometrical and flame-ionization detector for analysis of fatty acid biomarkers in human biospecimens, their analytical determination and statistical evaluation in two different study populations and different biospecimens as well as the elaboration of adverse reactions to food ingredients with special focus on food allergies and food intolerances in the context of a possible implementation into an application for consumer health. The first aim was the identification of potential influence of fatty acid biomarkers on desaturase and elongase indexes (Δ9DI, Δ6DI, Δ5DI and ELOVLI5), which are factors in type 2 diabetes risk, in breast adipose tissue from healthy women. Influence of further variables on respective indexes was also investigated. 40 samples were investigated and potential variables were either collected by questionnaire or determined. Principle component analysis was applied for fatty acid biomarkers (PCdiet1, PCdiet2 and PCdiet3 representative for the dietary intake of vegetable oils/nuts, fish and partially hydrogenated vegetable oils), endogenous estrogens (PCE1) and oxysterols (PCOxy1). Multiple linear regression models were applied. Δ9DI and Δ6DI were influenced non-significantly and significantly negatively by PCdiet2 supporting a putative beneficial effect of vegetable oils and nuts on type 2 diabetes risk factors. ELOVLI5 and Δ5DI were influenced significantly and non-significantly positively by PCdiet1 supporting a putative beneficial effect of fish consumption on type 2 diabetes risk factors. On the other hand, PCdiet1 also significantly and non-significantly positively influenced Δ9DI and Δ6DI supporting a putative adverse effect of fish biomarkers on type 2 diabetes risk factors. The opposing influences of PCdiet1 suggesting an ambivalent role of dietary intake of fish on investigated indexes. Δ6DI was significantly positively influenced by PCdiet3 and number of pregnancies supporting a putative adverse effect of partially hydrogenated vegetable oils and pregnancies on type 2 diabetes risk factors. Lifestyle factors like smoking significantly and non-significantly influenced Δ9DI and Δ6DI putatively adversely. Δ5DI was influenced significantly positively by estrogen active drugs suggesting a putative beneficial effect on type 2 diabetes risk factors. It must be considered that a variation coefficient of up to 0.44 only explained 44\% of variance of the respective indexes, suggesting other influencing factors might play a role. The second aim was the implementation of a gas chromatographical method coupled with a mass spectrometrical and flame-ionization detector for analysis of fatty acid biomarkers in human biospecimens. The method was optimized for separation and detection of 40 fatty acids. Mean recovery for tridecanoic acid was x(tridecanoic acid) = 90.51\% and for nonadecanoic acid x(nonadecanoic acid) = 96.21\%. Thus, there was no significant loss of fatty acids with shorter and longer carbon chains over the extraction process to be expected. Limit of detections were calculated in adipose tissue samples and ranged from 0.007 to 0.077\% of the proportion of the respective fatty acid to total fatty acids. The third aim was the investigation if differentiation between breast glandular and adipose tissue had a relevant impact on the analysis of dietary fatty acid biomarkers or if contamination of breast glandular with breast adipose tissue and vice versa was neglectable for the analysis of dietary fatty acid biomarkers. No statistical significant differences were observed for all investigated fatty acid biomarkers (pentadecanoic-, heptadecanoic-, trans palmitoleic-, eicosapentaenoic-, docosahexaenoic-, linoleic and α-linolenic acid) between breast glandular and adipose tissue. Thus, differentiation between breast glandular and adipose tissue seems not to be necessary for the analysis of fatty acids serving as biomarkers for the intake of specific food groups. Potential influence of mixed breast tissue on fatty acid biomarkers analysis seems to be neglectable. The fourth aim was the determination of fatty acid biomarkers in adipose tissue in another study population from healthy participants. 27 adipose tissue samples were analyzed. Milk and ruminant fat biomarkers exhibited proportions of 0.47\% for pentadecanoic acid, 0.34\% for heptadecanoic acid and 0.25\% for trans palmitoleic acid. Fish fatty acid biomarkers revealed proportions of 0.034\% for eicosapentaenoic acid and 0.061\% for docosahexaenoic acid. The mean proportion of vegetable oils and nuts biomarkers were 9.58\% for linoleic acid and 0.48\% for α-linolenic acid in all adipose tissues. Principle component analysis was applied for the fatty acid biomarkers to provide objective markers of habitual diet for this study population. PCdiet1 was mainly characterized by pentadecanoic acid, heptadecanoic acid and trans palmitoleic acid and therefore served as a principle component for the dietary intake of milk and ruminant fat. PCdiet2 and PCdiet3 only exhibited pattern for ω3 and ω6 fatty acids but not for dietary intake of specific food groups and could therefore not used as objective marker. PCdiet1, 2 and 3 explained 82.76\% of variance. The last aim of this thesis was the elaboration of adverse reactions to food ingredients with special focus on food allergies and food intolerances in the context of a possible implementation into an application for consumer health. Scientific information on adverse reactions to food ingredients and trigger substances was provided in this thesis and possible implementation strategies were evaluated. For food allergens, which have regulatory requirements in the context of labelling, a strategy was elaborated, where it is necessary to provide information on the list of ingredients, the nexus 'contain' and the respective food allergen as well as information on the name of the product. For food intolerances, which do not have regulatory requirements, limits were shown in the context of the application. If the elaborated food intolerances shall be implemented into the application, a professional dietary concept has to be developed for every food intolerance because of the complexity of the implementation.}, subject = {Lebensmittelchemie}, language = {en} } @phdthesis{Jung2023, author = {Jung, Johannes}, title = {Wechselwirkungen zwischen Kantenzust{\"a}nden auf dem topologisch kristallinen Isolator Pb\(_{1-x}\)Sn\(_x\)Se}, doi = {10.25972/OPUS-29861}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-298616}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Einerseits besteht die einfachste M{\"o}glichkeit zum Ladungs- und Informationstransport zwischen zwei Punkten in deren direkter Verbindung durch eindimensionale Kan{\"a}le. Andererseits besitzen topologische Materialien exotische und {\"a}ußerst vorteilhafte Eigenschaften, weshalb es nahe liegt, dass schon bald neue Anwendungen aus ihnen realisiert werden. Wenn diese beiden Entwicklungen zusammenkommen, dann ist ein grundlegendes Verst{\"a}ndnis von Quanteninterferenz oder Hybridisierungseffekten in eindimensionalen, topologischen Kan{\"a}len von fundamentaler Wichtigkeit. Deshalb werden in der vorliegenden Arbeit Wechselwirkungen von eindimensionalen, topologisch gesch{\"u}tzten Kantenzust{\"a}nden, die an ungeradzahligen Stufenkanten auf der (001)-Oberfl{\"a}che von Pb1-xSnxSe auftreten, untersucht. Aufgrund der lateralen Lokalisierung auf wenige Nanometer um eine Stufenkante herum und der Notwendigkeit zwischen gerad- und ungeradzahligen Stufenkantenh{\"o}hen zu unterscheiden, bieten sich die Rastertunnelmikroskopie und -spektroskopie als Methoden an. Die neu entdeckten Kopplungs- bzw. Wechselwirkungseffekte zwischen benachbarten Kantenzust{\"a}nden treten auf, sobald der Stufe zu Stufe Abstand einen kritischen Wert von dkri ≈ 25nm unterschreitet. Dieses Kriterium kann durch verschiedene r{\"a}umliche Anordnungen von Stufenkanten erf{\"u}llt werden. Infolgedessen werden sich kreuzende, parallel verlaufende und zusammenlaufende Stufenkanten genauer untersucht. Bei letzteren ver{\"a}ndert sich entlang der Struktur kontinuierlich der Abstand und damit die Kopplungsst{\"a}rke zwischen den beiden Randkan{\"a}len. Infolgedessen wurden drei Koppelungsregime identifiziert. (I) Ausgehend von einer schwachen Wechselwirkung zeigt der f{\"u}r die Kantenzust{\"a}nde charakteristische Peak im Spektrum zun{\"a}chst eine Verbreiterung und Verminderung der Intensit{\"a}t. (II) Mit weiter zunehmender Wechselwirkung beginnt sich der Zustand in zwei Peaks aufzuspalten, sodass ab dkri ≈ 15nm an beiden Stufenkanten durchgehen eine Doppelpeak zu beobachten ist . Mit weiter abnehmendem Abstand erreicht die Aufspaltung Werte von einigen 10 meV, w{\"a}hrend sich die Intensit{\"a}t weiter reduziert. (III) Sobald zwei Stufenkanten weniger als etwa 5nm voneinander getrennt sind, konvergieren aufgrund der schwindenden Intensit{\"a}t und des sinkenden energetischen Abstands der beiden Peaks zu den van Hove Singularit{\"a}ten die Spektren an den Stufenkanten gegen das Spektrum {\"u}ber einer Terrasse. i Die Aufspaltung verl{\"a}uft in den Bereichen I und II asymmetrisch, d. h. ein Peak verbleibt ungef{\"a}hr bei der Ausgangsenergie, w{\"a}hrend der andere mit zunehmender Kopplung immer weiter weg schiebt. Bez{\"u}glich der Asymmetrie kann kein Unterschied festgestellt werden, ob die zusammenlaufenden Stufenkanten eine Insel oder Fehlstelleninsel bilden oder ob die Stufenkanten sogar g{\"a}nzlich parallel verlaufen. Es zeigt sich keine Pr{\"a}ferenz, ob zun{\"a}chst der niederenergetische oder der hochenergetische Peak schiebt. Erst im Regime starker Kopplung (III) kann beobachtet werden, dass beide Peaks die Ausgangsenergie deutlich verlassen. Im Gegensatz dazu kann bei sich kreuzenden Stufen ein erheblicher Einfluss der Geometrie, in Form des eingeschlossenen Winkels, auf das Spektrum beobachtet werden. Unabh{\"a}ngig vom Winkel existiert am Kreuzungspunkt selbst kein Kantenzustand mehr. Die Zust{\"a}nde an den vier Stufen beginnen, abh{\"a}ngig vom Winkel, etwa 10-15nm vor dem Kreuzungspunkt abzuklingen. {\"U}berraschenderweise zeigt sich dabei, dass im Fall rechtwinkliger Stufen gar keine Aufspaltung zu beobachten ist, w{\"a}hrend bei allen anderen Winkeln ein Doppelpeak festgestellt werden kann. Diese Entdeckung deutet auf Orthogonalit{\"a}t bez{\"u}glich einer Quantenzahl bei den beteiligten Kantenzust{\"a}nde hin. Neben einer nur theoretisch vorhergesagten Spinpolarisation kann dieser Effekt auch von dem orbitalem Charakter der beteiligten Dirac-Kegel verursacht sein. Da der topologische Schutz in Pb1-xSnxSe durch Kristallsymmetrien garantiert ist, wird als letzter intrinsischer Effekt der Einfluss von eindimensionalen Defekten auf die Kantenzust{\"a}nde untersucht. Ber{\"u}cksichtigt werden dabei ein nicht n{\"a}her klassifizierbarer, oberfl{\"a}chennaher Defekt und Schraubversetzungen. In beiden F{\"a}llen kann ebenfalls eine Aufspaltung des Kantenzustands in einen Doppelpeak gezeigt werden. Im zweiten Teil dieser Arbeit werden die Grundlagen f{\"u}r eine Wiederverwendung von (Pb,Sn)Se-Oberfl{\"a}chen bei zuk{\"u}nftige Experimenten mit (magnetischen) Adatomen geschaffen. Durch Kombination von Inoenzerst{\"a}ubung und Tempern wird dabei nicht nur eine gereinigte Oberfl{\"a}che erzeugt, sondern es kann auch das Ferminiveau gezielt erh{\"o}ht oder gesenkt werden. Dieser Effekt beruht auf eine Modifikation der Sn- Konzentration und der von ihr kontrollierten Anzahl an Defektelektronen. Als letztes sind erste Messungen an Cu- und Fe-dotierte Proben gezeigt. Durch die Adatome tritt eine n-Dotierung auf, welche den Dirac-Punkt des Systems in Richtung des Ferminiveaus verschiebt. Sobald er dieses erreicht hat kommt es zu Wechselwirkungsph{\"a}nomenen an freistehenden Stufenkanten. Dies f{\"u}hrt zu einer Doppelpeakstruktur mit einer feinen Aufspaltung von wenigen meV. Das Ph{\"a}nomen ist auf ein schmales Energiefenster beschr{\"a}nkt, bei dem die Lage des Dirac-Punkts nur etwa 5 meV (in beide Richtungen) von der des Ferminiveaus abweichen darf.}, subject = {Topologischer Isolator}, language = {de} } @phdthesis{Forster2023, author = {Forster, Leonard}, title = {Hyaluronic acid based Bioinks for Biofabrication of Mesenchymal Stem Cells}, doi = {10.25972/OPUS-29860}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-298603}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {As a major component of the articular cartilage extracellular matrix, hyaluronic acid is a widely used biomaterial in regenerative medicine and tissue engineering. According to its well-known interaction with multiple chondrocyte surface receptors which positively affects many cellular pathways, some approaches by combining mesenchymal stem cells and hyaluronic acid-based hydrogels are already driven in the field of cartilage regeneration and fat tissue. Nevertheless, a still remaining major problem is the development of the ideal matrix for this purpose. To generate a hydrogel for the use as a matrix, hyaluronic acid must be chemically modified, either derivatized or crosslinked and the resulting hydrogel is mostly shaped by the mold it is casted in whereas the stem cells are embedded during or after the gelation procedure which does not allow for the generation of zonal hierarchies, cell density or material gradients. This thesis focuses on the synthesis of different hyaluronic acid derivatives and poly(ethylene glycol) crosslinkers and the development of different hydrogel and bioink compositions that allow for adjustment of the printability, integration of growth factors, but also for the material and biological hydrogel, respectively bioink properties.}, language = {en} } @phdthesis{Fasemore2023, author = {Fasemore, Akinyemi Mandela}, title = {Genomic and internet based analysis of \(Coxiella\) \(burnetii\)}, doi = {10.25972/OPUS-29663}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-296639}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Coxiella burnetii, a Gram negative obligate intracellular bacterium, is the causative agent of Q fever. It has a world wide distribution and has been documented to be capable of causing infections in several domestic animals, livestock species, and human beings. Outbreaks of Q fever are still being observed in livestock across animal farms in Europe, and primary transmission to humans still oc- curs especially in animal handlers. Public health authorities in some countries like Germany are required by law to report human acute cases denoting the significance of the challenge posed by C. burnetii to public health. In this thesis, I have developed a platform alongside methods to address the challenges of genomic analyses of C. burnetii for typing purposes. Identification of C. burnetii isolates is an important task in the laboratory as well as in the clinics and genotyping is a reliable method to identify and characterize known and novel isolates. Therefore, I designed and implemented several methods to facilitate the genotyping analyses of C. burnetii genomes in silico via a web platform. As genotyping is a data intensive process, I also included additional features such as visualization methods and databases for interpretation and storage of obtained results. I also developed a method to profile the resistome of C. burnetii isolates using a machine learning approach. Data about antibiotic resistance in C. burnetii are scarce majorly due to its lifestyle and the difficulty of cultivation in laboratory media. Alternative methods that rely on homology identification of resistance genes are also inefficient in C. burnetii, hence, I opted for a novel approach that has been shown to be promising in other bacteria species. The applied method relied on an artificial neural network as well as amino acid composition of position specific scoring matrix profile for feature extraction. The resulting model achieved an accuracy of ≈ 0.96 on test data and the overall performance was significantly higher in comparison to existing models. Finally, I analyzed two new C. burnetii isolates obtained from an outbreak in Germany, I compared the genome to the RSA 493 reference isolate and found extensive deletions across the genome landscape. This work has provided a new digital infrastructure to analyze and character- ize C. burnetii genomes that was not in existence before and it has also made a significant contribution to the existing information about antibiotic resistance genes in C. burnetii.}, language = {en} } @phdthesis{Vogg2023, author = {Vogg, Nora Johanna}, title = {Mass spectrometry-based quantification of steroids for the diagnostic workup of adrenal tumors}, doi = {10.25972/OPUS-29343}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-293438}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Tumors of the adrenal gland belong to the most frequent neoplasms in humans with a prevalence of 3-10 \% in adults. The aim of the diagnostic workup is the identification of potentially hormone-secreting and / or malignant tumors, because most of these tumors will require surgical resection. Malignant adrenocortical carcinomas (ACC) are very rare and associated with a poor prognosis in advanced stages, therefore, an early and accurate diagnosis is crucial. Within this thesis, two liquid chromatography tandem mass spectrometry (LC-MS/MS) methods for the quantification of steroids in different biomaterials were developed to improve the diagnostic workup of adrenal tumors. First, an LC-MS/MS method for the simultaneous quantification of cortisol and dexamethasone in serum samples after dexamethasone suppression test (DST) was developed, validated, and applied to 400 clinical samples. Newly established method-specific threshold concentrations for cortisol and dexamethasone increased DST specificity from 67.5 \% to 92.4 \% while preserving 100 \% sensitivity. Second, an LC-MS/MS method for the quantification of eleven urinary steroids was developed and validated to improve the differentiation between ACC and adrenocortical adenomas (ACA). A decision tree requiring only two steroids was trained for classification and tested based on 24 h urine samples from 268 patients with adrenal tumor. Malignancy was excluded with a negative predictive value of 100 \% in an independent validation cohort of 84 samples of 24-h urine. A newly proposed simplified diagnostic workflow with urinary steroid profiling as first tier test could obviate additional adrenal-specific imaging in 42 of 64 patients with ACA. The new DST method is already in clinical use at the University Hospital W{\"u}rzburg, whereas the classification model based on urinary steroid profiling will require prospective validation in a larger cohort.}, subject = {Nebennierentumor}, language = {en} } @phdthesis{Geyer2023, author = {Geyer, Florian}, title = {Targeting of M\(_2\) and M\(_4\) Muscarinic Receptor Subtypes with New Dualsteric Ligands}, doi = {10.25972/OPUS-27150}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-271506}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {As part of the parasympathetic nervous system, muscarinic receptors are involved in the regulation of numerous functions in the human body. However, targeting a specific subtype of muscarinic receptors is challenging due to the high degree of similarity within the binding site of the endogenous neurotransmitter acetylcholine. Therefore, this study focused on the investigation of dualsteric ligands. Such hybrid ligands target the orthosteric acetylcholine binding site and, simultaneously, a distinct allosteric binding site. Since allosteric binding regions show significant structural differences throughout muscarinic receptor subtypes, it was aimed to produce selective ligands by means of combination of two pharmacophores in one molecule. Herein, the thienopyridine derivatives LY2033298 and LY2119620 were chosen as allosteric moieties. Based on literature studies, the investigated allosteric modulators were analyzed in terms of adequate attachment points for the combination with an orthosteric agonist. As orthosteric units, muscarinic superagonist iperoxo, xanomeline, and TMA were applied in this work. Since the distance between orthosteric and allosteric moieties plays a crucial role for dualsteric ligand binding, the linker chain length was also varied. Pharmacological investigations of the synthesized hybrid ligands were perfomed via FRET- and BRET-assay measurements.}, subject = {GTP-bindende Proteine}, language = {en} } @phdthesis{Herrmann2023, author = {Herrmann, Ruth Magdalena}, title = {Molekular- und zellbiologische Untersuchung zur Rolle des kanonischen Wnt-Signalwegs bei der Entwicklung von \(Echinococcus\) \(multilocularis\)}, doi = {10.25972/OPUS-27193}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-271937}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Die alveol{\"a}re Echinokokkose (AE) ist eine lebensbedrohliche Erkrankung des Menschen, welche durch das infiltrative Wachstum des Metazestoden-Larvenstadiums des Fuchsbandwurms (Echinococcus multilocularis) in der Leber verursacht wird. Das tumorartige Wachstum des Metazestoden beruht auf einer Echinococcus-spezifischen Modifikation der anterior-posterioren-K{\"o}rperachse (AP Achse). Es wird vermutet, dass dabei der anteriore Pol der invadierenden Oncosp{\"a}ren-Larve zun{\"a}chst abgeschaltet wird und sich der Metazestode anschließend asexuell als vesikul{\"a}res, posteriorisiertes Gewebes im Wirt vermehrt. Nach massiver Proliferation wird der anteriore Pol reetabliert und f{\"u}hrt zur Bildung zahlreicher Bandwurm-Kopfanlagen (Protoskolizes). Da die Ausbildung der AP K{\"o}rperachse evolutionsgeschichtlich konserviert {\"u}ber den wingless-related (Wnt)-Signalweg gesteuert wird, wurde in dieser Arbeit die Rolle von Wnt-Signaling bei der Musterbildung von E. multilocularis {\"u}ber molekular- und zellbiologische Studien n{\"a}her beleuchtet. Zentraler methodischer Ansatz der vorliegenden Arbeit war ein E. multilocularis Stammzell-Kultursystem, das Prim{\"a}rzellsystem, welches die in vitro-Generierung von Metazestoden-Vesikeln durch Proliferation und Differenzierung von germinativen Zellen (Stammzellen) erlaubt. {\"U}ber RNA-Sequenzierung wurde zun{\"a}chst gezeigt, dass in Prim{\"a}rzellkulturen sowohl Markergene f{\"u}r posteriore Entwicklung in Richtung Metazestode wie auch f{\"u}r Anterior-und Protoskolexmarker exprimiert werden. Unter Verwendung von RNA-Interferenz (RNAi) wurde anschließend ein erfolgreicher Knockdown des vermuteten Hauptregulators des kanonischen Wnt-Signalwegs, β Catenin (em-bcat1), erreicht und f{\"u}hrte zu einem charakteristischen, sogenannten ‚red dot' Ph{\"a}notyp, dem ersten jemals beschriebenen RNAi Ph{\"a}notyp f{\"u}r E. multilocularis-Prim{\"a}rzellen. Prim{\"a}rzellkulturen nach em-bcat1 RNAi zeigten eine stark verminderte F{\"a}higkeit, Metazestoden-Vesikel zu bilden sowie eine {\"U}berproliferation von germinativen Zellen. Zus{\"a}tzliche RNA-Seq-Analysen des Transkriptoms von RNAi(em-bcat1)-Kulturen zeigten eine signifikant verringerte Expression von Posterior- und Metazestodenmarkern, w{\"a}hrend Anterior- und Protoskolexmarker deutlich {\"u}berexprimiert wurden. Durch umfangreiche Whole-mount-in-situ-Hybridisierung (WMISH)-Experimente wurden diese Daten f{\"u}r eine Reihe ausgew{\"a}hlter Markergene f{\"u}r posteriore (Metazestode; em-wnt1, em-wnt11b, em-muc1) und f{\"u}r anteriore Entwicklung (Protoskolex; em sfrp, em-nou-darake, em npp36, em-frizzled10) verifiziert. In allen genannten F{\"a}llen zeigte sich durch {\"A}nderung der Polarit{\"a}t eine verminderte Genexpression von Posteriormarkern, w{\"a}hrend Anteriormarker deutlich erh{\"o}ht exprimiert wurden. {\"A}hnlich wie bei den verwandten, freilebenden Planarien, f{\"u}hrt demnach ein Knockdown des zentralen Wnt-Regulators β-Catenin bei E. multilocularis zu einer anteriorisierten, Anterior- und Protoskolexmarker dominierte Genexpression, welche der posteriorisierten Entwicklung zum Metazestoden entgegenwirkt. Neben Markergenen f{\"u}r die Ausbildung der AP-Achse wurden in dieser Arbeit auch solche f{\"u}r die medio-laterale (ML)-K{\"o}rperachse bei Zestoden erstmals beschrieben. So zeigte sich, dass ein Slit-Ortholog (em slit) im E. multilocularis Protoskolex im Bereich der K{\"o}rper-Mittellinie exprimiert wird und lieferte Hinweise darauf, dass, {\"a}hnlich zur Situation bei Planarien, die ML Achse von E. multilocularis durch Morphogengradienten aus slit (Mittellinie) und wnt5 (lateral) definiert wird. Im Metazestoden wird hingegen nur em-slit exprimiert. Der Metazestode besitzt damit als posterior-medianisiertes Gewebe Anlagen zur Polarit{\"a}t zur AP- und ML-Achse, welche erst mit Bildung von Protoskolizes vollst{\"a}ndig etabliert werden. Schließlich deuten die Ergebnisse dieser Arbeit darauf hin, dass bei der Wiederherstellung der K{\"o}rperachsen w{\"a}hrend der Entwicklung von Protoskolizes Hedgehog (Hh)-Signale entscheidend mitwirken. Zusammenfassend wurde in dieser Arbeit der zentrale Faktor des kanonischen Wnt Signalwegs, β-Catenin, als Hauptregulator der Entwicklung des tumorartig wachsenden E. multilocularis-Metazestoden identifiziert. Zudem wurde gezeigt, dass zur Metazestodenbildung neben einer Echinococcus-spezifischen Modifikation der AP K{\"o}rperachse auch eine solche der ML Achse beitr{\"a}gt. In humanen malignen Tumoren sind der Wnt-, Slit-Robo- und Hh-Signalweg gut erforschte Wirkstofftargets und k{\"o}nnten in Zukunft in {\"a}hnlicher Weise f{\"u}r eine zielgerichtete Therapie von AE dienen.}, subject = {Fuchsbandwurm}, language = {de} } @phdthesis{Rutschmann2023, author = {Rutschmann, Benjamin}, title = {Occurrence and population density of wild-living honey bees in Europe and the impact of different habitat types on their foraging and overwintering success}, doi = {10.25972/OPUS-28673}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-286732}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {The original habitat of native European honey bees (\(Apis\) \(mellifera\)) is forest, but currently there is a lack of data about the occurrence of wild honey bee populations in Europe. Prior to being kept by humans in hives, honey bees nested as wild species in hollow trees in temperate forests. However, in the 20th century, intensification of silviculture and agriculture with accompanying losses of nesting sites and depletion of food resources caused population declines in Europe. When the varroa mite (Varroa destructor), an invasive ectoparasite from Asia, was introduced in the late 1970s, wild honey bees were thought to be eradicated in Europe. Nevertheless, sporadic, mostly anecdotal, reports from ornithologists or forest ecologists indicated that honey bee colonies still occupy European forest areas. In my thesis I hypothesize that near-natural deciduous forests may provide sufficient large networks of nesting sites representing refugia for wild-living honey bees. Using two special search techniques, i.e. the tracking of flight routes of honey bee foragers (the "beelining" method) and the inspection of known cavity trees, I collected for the first time data on the occurrence and density of wild-living honey bees in forest areas in Germany (CHAPTER 3). I found wild-living honey bee colonies in the Hainich national park at low densities in two succeeding years. In another forest region, I checked known habitat trees containing black woodpecker cavities for occupation by wild-living honey bee colonies. It turned out that honey bees regularly use these cavities and occur in similar densities in both studied forest regions, independent of the applied detection method. Extrapolating these densities to all German forest areas, I estimate several thousand wild-living colonies in Germany that potentially interact in different ways with the forest environment. I conclude that honey bees regularly colonize forest areas in Germany and that networks of mapped woodpecker cavities offer unique possibilities to study the ecology of wild-living honey bees over several years. While their population status is ambiguous and the density of colonies low, the fact that honey bees can still be found in forests poses questions about food supply in forest environments. Consequently, I investigated the suitability of woodlands as a honey bee foraging habitat (CHAPTER 4). As their native habitat, forests are assumed to provide important pollen and nectar sources for honey bee colonies. However, resource supply might be spatially and temporally restricted and landscape-scale studies in European forest regions are lacking. Therefore, I set up twelve honey bee colonies in observation hives at locations with varying degree of forest cover. Capitalizing on the unique communication behaviour, the waggle dance, I examined the foraging distances and habitat preferences of honey bees over almost an entire foraging season. Moreover, by connecting this decoded dance information with colony weight recordings, I could draw conclusions about the contribution of the different habitat types to honey yield. Foraging distances generally increased with the amount of forest in the surrounding landscape. Yet, forest cover did not have an effect on colony weight. Compared to expectations based on the proportions of different habitats in the surroundings, colonies foraged more frequently in cropland and grasslands than in deciduous and coniferous forests, especially in late summer when pollen foraging in the forest is most difficult. In contrast, colonies used forests for nectar/honeydew foraging in early summer during times of colony weight gain emphasizing forests as a temporarily significant source of carbohydrates. Importantly, my study shows that the ecological and economic value of managed forest as habitat for honey bees and other wild pollinators can be significantly increased by the continuous provision of floral resources, especially for pollen foraging. The density of these wild-living honey bee colonies and their survival is driven by several factors that vary locally, making it crucial to compare results in different regions. Therefore, I investigated a wild-living honey bee population in Galicia in north-western Spain, where colonies were observed to reside in hollow electric poles (CHAPTER 5). The observed colony density only in these poles was almost twice as high as in German forest areas, suggesting generally more suitable resource conditions for the bees in Galicia. Based on morphometric analyses of their wing venation patterns, I assigned the colonies to the native evolutionary lineage (M-lineage) where the particularly threatened subspecies \(Apis\) \(mellifera\) \(iberiensis\) also belongs to. Averaged over two consecutive years, almost half of the colonies survived winter (23 out of 52). Interestingly, semi-natural areas both increased abundance and subsequent colony survival. Colonies surrounded by more semi-natural habitat (and therefore less intensive cropland) had an elevated overwintering probability, indicating that colonies need a certain amount of semi-natural habitat in the landscape to survive. Due to their ease of access these power poles in Galicia are, ideally suited to assess the population demography of wild-living Galician honey bee colonies through a long-term monitoring. In a nutshell, my thesis indicates that honey bees in Europe always existed in the wild. I performed the first survey of wild-living bee density yet done in Germany and Spain. My thesis identifies the landscape as a major factor that compromises winter survival and reports the first data on overwintering rates of wild-living honey bees in Europe. Besides, I established methods to efficiently detect wild-living honey bees in different habitat. While colonies can be found all over Europe, their survival and viability depend on unpolluted, flower rich habitats. The protection of near-natural habitat and of nesting sites is of paramount importance for the conservation of wild-living honey bees in Europe.  }, subject = {Biene}, language = {en} } @phdthesis{Franzke2023, author = {Franzke, Myriam}, title = {Keep on track : The use of visual cues for orientation in monarch butterflies}, doi = {10.25972/OPUS-28470}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-284709}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {The monarch butterfly (Danaus plexippus) performs one of the most astonishing behaviors in the animal kingdom: every fall millions of these butterflies leave their breeding grounds in North Amerika and migrate more than 4.000 km southwards until they reach their overwintering habitat in Central Mexico. To maintain their migratory direction over this enormous distance, the butterflies use a time-compensated sun compass. Beside this, skylight polarization, the Earth's magnetic field and specific mountain ranges seem to guide the butterflies as well the south. In contrast to this fascinating orientation ability, the behavior of the butterflies in their non-migratory state received less attention. Although they do not travel long distances, they still need to orient themselves to find food, mating partners or get away from competitors. The aim of the present doctoral thesis was to investigate use of visual cues for orientation in migrating as well as non-migrating monarch butterflies. For this, field experiments investigating the migration of the butterflies in Texas (USA) were combined with experiments testing the orientation performance of non-migratory butterflies in Germany. In the first project, I recorded the heading directions of tethered butterflies during their annual fall migration. In an outdoor flight simulator, the butterflies maintained a southwards direction as long as they had a view of the sun's position. Relocating the position of the sun by 180° using a mirror, revealed that the sun is the animals' main orientation reference. Furthermore, I demonstrated that when the sun is blocked and a green light stimulus (simulated sun) is introduced, the animals interpreted this stimulus as the 'real' sun. However, this cue was not sufficient to set the migratory direction when simulated as the only visual cue in indoor experiments. When I presented the butterflies a linear polarization pattern additionally to the simulated sun, the animals headed in the correct southerly direction showing that multiple skylight cues are required to guide the butterflies during their migration. In the second project, I, furthermore, demonstrated that non-migrating butterflies are able to maintain a constant direction with respect to a simulated sun. Interestingly, they ignored the spectral component of the stimulus and relied on the intensity instead. When a panoramic skyline was presented as the only orientation reference, the butterflies maintained their direction only for short time windows probably trying to stabilize their flight based on optic-flow information. Next, I investigated whether the butterflies combine celestial with local cues by simulating a sun stimulus together with a panoramic skyline. Under this conditions, the animals' directedness was increased demonstrating that they combine multiple visual cues for spatial orientation. Following up on the observation that a sun stimulus resulted in a different behavior than the panoramic skyline, I investigated in my third project which orientation strategies the butterflies use by presenting different simulated cues to them. While a bright stripe on a dark background elicited a strong attraction of the butterflies steering in the direction of the stimulus, the inverted version of the stimulus was used for flight stabilization. In contrast to this, the butterflies maintained arbitrary directions with a high directedness with respect to a simulated sun. In an ambiguous scenery with two identical stimuli (two bright stripes, two dark stripes, or two sun stimuli) set 180° apart, a constant flight course was only achieved when two sun stimuli were displayed suggesting an involvement of the animals' internal compass. In contrast, the butterflies used two dark stripes for flight stabilization and were alternatingly attracted by two bright stripes. This shows that monarch butterflies use stimulus-dependent orientation strategies and gives the first evidence for different neuronal pathways controlling the output behavior.}, subject = {Monarchfalter}, language = {en} } @phdthesis{Kunz2023, author = {Kunz, Marcel}, title = {Diffusion kinetics of organic compounds and water in plant cuticular model wax under the influence of diffusing barrier-modifying adjuvants}, doi = {10.25972/OPUS-27487}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-274874}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {To reach their target site, systemic pesticides must enter the plant from a spray droplet applied in the field. The uptake of an active ingredient (AI) takes place via the barrier-forming cuticular membrane, which is the outermost layer of the plant, separating it from the surrounding environment. Formulations are usually used which, in addition to the AI, also contain stabilizers and adjuvants. Adjuvants can either have surface-active properties or they act directly as barrier-modifying agents. The latter are grouped in the class of accelerating adjuvants, whereby individual variants may also have surface-active properties. The uptake of a pesticide from a spray droplet depends essentially on its permeability through the cuticular barrier. Permeability defines a combined parameter, which is the product of AI mobility and AI solubility within the cuticle. In recent decades, several tools have been developed that allowed the determination of individual parameters of organic compound penetration across the cuticular membrane. Nevertheless, earlier studies showed that mainly cuticular waxes are the barrier-determining component of the cuticular membrane and additionally, it was shown that mainly the very-long-chain aliphatic compounds (VLCAs) are responsible for establishing an effective barrier. However, the barrier-determining role of the individual VLCAs, being classified according to their respective functional groups, is still unknown. Therefore, the following objectives were pursued and achieved in this work: (1) A new ATR-FTIR-based approach was developed to measure the temperature-dependent real-time diffusion kinetics of organic models for active ingredients (AIs) in paraffin wax, exclusively consisting of very-long chain alkanes. (2) The developed ATR-FTIR approach was applied to determine the diffusion kinetics of self-accelerating adjuvants in cuticular model waxes of different VLCA composition. At the same time, wax-specific changes were recorded in the respective IR spectra, which provided information about the respective wax modification. (3) The ATR-FTIR method was used to characterize the diffusion kinetics, as well as to determine the wax-specific sorption capacities for an AI-modeling organic compound and water in cuticular model waxes after adjuvant treatment. Regarding the individual chemical compositions and structures, conclusions were drawn about the adjuvant-specific modes of action (MoA). In the first chapter, the ATR-FTIR based approach to determine organic compound diffusion kinetics in paraffin wax was successfully established. The diffusion kinetics of the AI modelling organic compounds heptyl parabene (HPB) and 4-cyanophenol (CNP) were recorded, comprising different lipophilicities and molecular volumes typical for AIs used in pesticide formulations. Derived diffusion coefficients ranged within 10-15 m2 s-1, thus being thoroughly higher than those obtained from previous experiments using an approach solely investigating desorption kinetics in reconstituted cuticular waxes. An ln-linear dependence between the diffusion coefficients and the applied diffusion temperature was demonstrated for the first time in cuticular model wax, from which activation energies were derived. The determined activation energies were 66.2 ± 7.4 kJ mol-1 and 56.4 ± 9.8 kJ mol-1, being in the expected range of already well-founded activation energies required for organic compound diffusion across cuticular membranes, which again confirmed the significant contribution of waxes to the cuticular barrier. Deviations from the assumed Fickian diffusion were attributed to co-occurring water diffusion and apparatus-specific properties. In the second and third chapter, mainly the diffusion kinetics of accelerating adjuvants in the cuticular model waxes candelilla wax and carnauba wax were investigated, and simultaneously recorded changes in the wax-specific portion of the IR spectrum were interpreted as indications of plasticization. For this purpose, the oil derivative methyl oleate, as well as the organophosphate ester TEHP and three non-ionic monodisperse alcohol ethoxylates (AEs) C12E2, C12E4 and C12E6 were selected. Strong dependence of diffusion on the respective principal components of the mainly aliphatic waxes was demonstrated. The diffusion kinetics of the investigated adjuvants were faster in the n-alkane dominated candelilla wax than in the alkyl ester dominated carnauba wax. Furthermore, the equilibrium absorptions, indicating equilibrium concentrations, were also higher in candelilla wax than in carnauba wax. It was concluded that alkyl ester dominated waxes feature higher resistance to diffusion of accelerating adjuvants than alkane dominated waxes with shorter average chain lengths due to their structural integrity. This was also found either concerning candelilla/policosanol (n-alcohol) or candelilla/rice bran wax (alkyl-esters) blends: with increasing alcohol concentration, the barrier function was decreased, whereas it was increased with increasing alkyl ester concentration. However, due to the high variability of the individual diffusion curves, only a trend could be assumed here, but significant differences were not shown. The variability itself was described in terms of fluctuating crystalline arrangements and partial phase separation of the respective wax mixtures, which had inevitable effects on the adjuvant diffusion. However, diffusion kinetics also strongly depended on the studied adjuvants. Significantly slower methyl oleate diffusion accompanied by a less pronounced reduction in orthorhombic crystallinity was found in carnauba wax than in candelilla wax, whereas TEHP diffusion was significantly less dependent on the respective wax structure and therefore induced considerable plasticization in both waxes. Of particular interest was the AE diffusion into both waxes. Differences in diffusion kinetics were also found here between candelilla blends and carnauba wax. However, these depended equally on the degree of ethoxylation of the respective AEs. The lipophilic C12E2 showed approximately Fickian diffusion kinetics in both waxes, accompanied by a drastic reduction in orthorhombic crystallinity, especially in candelilla wax, whereas the more hydrophilic C12E6 showed significantly retarded diffusion kinetics associated with a smaller effect on orthorhombic crystallinity. The individual diffusion kinetics of the investigated adjuvants sometimes showed drastic deviations from the Fickian diffusion model, indicating a self-accelerating effect. Hence, adjuvant diffusion kinetics were accompanied by a distinct initial lag phase, indicating a critical concentration in the wax necessary for effective penetration, leading to sigmoidal rather than to exponential diffusion kinetics. The last chapter dealt with the adjuvant-affected diffusion of the AI modelling CNP in candelilla and carnauba wax. Using ATR-FTIR, diffusion kinetics were recorded after adjuvant treatment, all of which were fully explicable based on the Fickian model, with high diffusion coefficients ranging from 10-14 to 10-13 m2 s-1. It is obvious that the diffusion coefficients presented in this work consistently demonstrated plasticization induced accelerated CNP mobilities. Furthermore, CNP equilibrium concentrations were derived, from which partition- and permeability coefficients could be determined. Significant differences between diffusion coefficients (mobility) and partition coefficients (solubility) were found on the one hand depending on the respective waxes, and on the other hand depending on treatment with respective adjuvants. Mobility was higher in candelilla wax than in carnauba wax only after methyl oleate treatment. Treatment with TEHP and AEs resulted in higher CNP mobility in the more polar alkyl ester dominated carnauba wax. The partition coefficients, on the other hand, were significantly lower after methyl oleate treatment in both candelilla and carnauba wax as followed by TEHP or AE treatment. Models were designed for the CNP penetration mode considering the respective adjuvants in both investigated waxes. Co-penetrating water, which is the main ingredient of spray formulations applied in the field, was likely the reason for the drastic differences in adjuvant efficacy. Especially the investigated AEs favored an enormous water uptake in both waxes with increasing ethoxylation level. Surprisingly, this effect was also found for the lipophilic TEHP in both waxes. This led to the assumption that the AI permeability is not exclusively determined by adjuvant induced plasticization, but also depends on a "secondary plasticization", induced by adjuvant-attracted co-penetrating water, consequently leading to swelling and drastic destabilization of the crystalline wax structure. The successful establishment of the presented ATR-FTIR method represents a milestone for the study of adjuvant and AI diffusion kinetics in cuticular waxes. In particular, the simultaneously detectable wax modification and, moreover, the determinable water uptake form a perfect basis to establish the ATR-FTIR system as a universal screening tool for wax-adjuvants-AI-water interaction in crop protection science.}, subject = {Pflanzen}, language = {en} } @phdthesis{Deng2023, author = {Deng, Chunchu}, title = {Dynamic remodeling of endoplasmic reticulum and ribosomes in axon terminals of wildtype and Spinal Muscular Atrophy motoneurons}, doi = {10.25972/OPUS-26495}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-264954}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {In highly polarized neurons, endoplasmic reticulum (ER) forms a dynamic and continuous network in axons that plays important roles in lipid synthesis, Ca2+ homeostasis and the maintenance of synapses. However, the mechanisms underlying the regulation of axonal ER dynamics and its function in regulation of local translation still remain elusive. In the course of my thesis, I investigated the fast dynamic movements of ER and ribosomes in the growth cone of wildtype motoneurons as well as motoneurons from a mouse model of Spinal Muscular Atrophy (SMA), in response to Brain-derived neurotrophic factor (BDNF) stimulation. Live cell imaging data show that ER extends into axonal growth cone filopodia along actin filaments and disruption of actin cytoskeleton by cytochalasin D treatment impairs the dynamic movement of ER in the axonal filopodia. In contrast to filopodia, ER movements in the growth cone core seem to depend on coordinated actions of the actin and microtubule cytoskeleton. Myosin VI is especially required for ER movements into filopodia and drebrin A mediates actin/microtubule coordinated ER dynamics. Furthermore, we found that BDNF/TrkB signaling induces assembly of 80S ribosomes in growth cones on a time scale of seconds. Activated ribosomes relocate to the presynaptic ER and undergo local translation. These findings describe the dynamic interaction between ER and ribosomes during local translation and identify a novel potential function for the presynaptic ER in intra-axonal synthesis of transmembrane proteins such as the α-1β subunit of N-type Ca2+ channels in motoneurons. In addition, we demonstrate that in Smn-deficient motoneurons, ER dynamic movements are impaired in axonal growth cones that seems to be due to impaired actin cytoskeleton. Interestingly, ribosomes fail to undergo rapid structural changes in Smn-deficient growth cones and do not associate to ER in response to BDNF. Thus, aberrant ER dynamics and ribosome response to extracellular stimuli could affect axonal growth and presynaptic function and maintenance, thereby contributing to the pathology of SMA.}, subject = {Motoneuron}, language = {en} } @phdthesis{Nogatz2023, author = {Nogatz, Falco}, title = {Defining and Implementing Domain-Specific Languages with Prolog}, doi = {10.25972/OPUS-30187}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301872}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {The landscape of today's programming languages is manifold. With the diversity of applications, the difficulty of adequately addressing and specifying the used programs increases. This often leads to newly designed and implemented domain-specific languages. They enable domain experts to express knowledge in their preferred format, resulting in more readable and concise programs. Due to its flexible and declarative syntax without reserved keywords, the logic programming language Prolog is particularly suitable for defining and embedding domain-specific languages. This thesis addresses the questions and challenges that arise when integrating domain-specific languages into Prolog. We compare the two approaches to define them either externally or internally, and provide assisting tools for each. The grammar of a formal language is usually defined in the extended Backus-Naur form. In this work, we handle this formalism as a domain-specific language in Prolog, and define term expansions that allow to translate it into equivalent definite clause grammars. We present the package library(dcg4pt) for SWI-Prolog, which enriches them by an additional argument to automatically process the term's corresponding parse tree. To simplify the work with definite clause grammars, we visualise their application by a web-based tracer. The external integration of domain-specific languages requires the programmer to keep the grammar, parser, and interpreter in sync. In many cases, domain-specific languages can instead be directly embedded into Prolog by providing appropriate operator definitions. In addition, we propose syntactic extensions for Prolog to expand its expressiveness, for instance to state logic formulas with their connectives verbatim. This allows to use all tools that were originally written for Prolog, for instance code linters and editors with syntax highlighting. We present the package library(plammar), a standard-compliant parser for Prolog source code, written in Prolog. It is able to automatically infer from example sentences the required operator definitions with their classes and precedences as well as the required Prolog language extensions. As a result, we can automatically answer the question: Is it possible to model these example sentences as valid Prolog clauses, and how? We discuss and apply the two approaches to internal and external integrations for several domain-specific languages, namely the extended Backus-Naur form, GraphQL, XPath, and a controlled natural language to represent expert rules in if-then form. The created toolchain with library(dcg4pt) and library(plammar) yields new application opportunities for static Prolog source code analysis, which we also present.}, subject = {PROLOG }, language = {en} } @incollection{Chaturvedi2023, author = {Chaturvedi, Ridhi}, title = {Female Suicidality and Its Cultural Aspects: Watching the "Living Dead" in Deepa Mehta's Water}, series = {Global Cultural Studies? Engaged Scholarship between National and Transnational Frames}, booktitle = {Global Cultural Studies? Engaged Scholarship between National and Transnational Frames}, editor = {Jetter, Tobias}, publisher = {W{\"u}rzburg University Press}, address = {W{\"u}rzburg}, doi = {10.25972/WUP-978-3-95826-207-2-129}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-305927}, publisher = {W{\"u}rzburg University Press}, pages = {129-147}, year = {2023}, abstract = {No abstract available.}, subject = {Film}, language = {en} } @incollection{Wohlfahrt2023, author = {Wohlfahrt, Saskia}, title = {Rethinking Cultural Studies: From the Role of the Intellectual to Transnational Feminism}, series = {Global Cultural Studies? Engaged Scholarship between National and Transnational Frames}, booktitle = {Global Cultural Studies? Engaged Scholarship between National and Transnational Frames}, editor = {Jetter, Tobias}, publisher = {W{\"u}rzburg University Press}, address = {W{\"u}rzburg}, doi = {10.25972/WUP-978-3-95826-207-2-159}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-305935}, publisher = {W{\"u}rzburg University Press}, pages = {159-170}, year = {2023}, abstract = {No abstract available.}, subject = {Kulturwissenschaften}, language = {en} } @article{SoundararajanMarincolaLiongetal.2023, author = {Soundararajan, Manonmani and Marincola, Gabriella and Liong, Olivia and Marciniak, Tessa and Wencker, Freya D. R. and Hofmann, Franka and Schollenbruch, Hannah and Kobusch, Iris and Linnemann, Sabrina and Wolf, Silver A. and Helal, Mustafa and Semmler, Torsten and Walther, Birgit and Schoen, Christoph and Nyasinga, Justin and Revathi, Gunturu and Boelhauve, Marc and Ziebuhr, Wilma}, title = {Farming practice influences antimicrobial resistance burden of non-aureus staphylococci in pig husbandries}, series = {Microorganisms}, volume = {11}, journal = {Microorganisms}, number = {1}, issn = {2076-2607}, doi = {10.3390/microorganisms11010031}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-312750}, year = {2023}, abstract = {Non-aureus staphylococci (NAS) are ubiquitous bacteria in livestock-associated environments where they may act as reservoirs of antimicrobial resistance (AMR) genes for pathogens such as Staphylococcus aureus. Here, we tested whether housing conditions in pig farms could influence the overall AMR-NAS burden. Two hundred and forty porcine commensal and environmental NAS isolates from three different farm types (conventional, alternative, and organic) were tested for phenotypic antimicrobial susceptibility and subjected to whole genome sequencing. Genomic data were analysed regarding species identity and AMR gene carriage. Seventeen different NAS species were identified across all farm types. In contrast to conventional farms, no AMR genes were detectable towards methicillin, aminoglycosides, and phenicols in organic farms. Additionally, AMR genes to macrolides and tetracycline were rare among NAS in organic farms, while such genes were common in conventional husbandries. No differences in AMR detection existed between farm types regarding fosfomycin, lincosamides, fusidic acid, and heavy metal resistance gene presence. The combined data show that husbandry conditions influence the occurrence of resistant and multidrug-resistant bacteria in livestock, suggesting that changing husbandry practices may be an appropriate means of limiting the spread of AMR bacteria on farms.}, language = {en} } @article{MichauxGerovacHansenetal.2023, author = {Michaux, Charlotte and Gerovac, Milan and Hansen, Elisabeth E. and Barquist, Lars and Vogel, J{\"o}rg}, title = {Grad-seq analysis of Enterococcus faecalis and Enterococcus faecium provides a global view of RNA and protein complexes in these two opportunistic pathogens}, series = {microLife}, volume = {4}, journal = {microLife}, doi = {10.1093/femsml/uqac027}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-313311}, year = {2023}, abstract = {Enterococcus faecalis and Enterococcus faecium are major nosocomial pathogens. Despite their relevance to public health and their role in the development of bacterial antibiotic resistance, relatively little is known about gene regulation in these species. RNA-protein complexes serve crucial functions in all cellular processes associated with gene expression, including post-transcriptional control mediated by small regulatory RNAs (sRNAs). Here, we present a new resource for the study of enterococcal RNA biology, employing the Grad-seq technique to comprehensively predict complexes formed by RNA and proteins in E. faecalis V583 and E. faecium AUS0004. Analysis of the generated global RNA and protein sedimentation profiles led to the identification of RNA-protein complexes and putative novel sRNAs. Validating our data sets, we observe well-established cellular RNA-protein complexes such as the 6S RNA-RNA polymerase complex, suggesting that 6S RNA-mediated global control of transcription is conserved in enterococci. Focusing on the largely uncharacterized RNA-binding protein KhpB, we use the RIP-seq technique to predict that KhpB interacts with sRNAs, tRNAs, and untranslated regions of mRNAs, and might be involved in the processing of specific tRNAs. Collectively, these datasets provide departure points for in-depth studies of the cellular interactome of enterococci that should facilitate functional discovery in these and related Gram-positive species. Our data are available to the community through a user-friendly Grad-seq browser that allows interactive searches of the sedimentation profiles (https://resources.helmholtz-hiri.de/gradseqef/).}, language = {en} } @article{RaschigRamirez‐ZavalaWiestetal.2023, author = {Raschig, Martina and Ram{\´i}rez-Zavala, Bernardo and Wiest, Johannes and Saedtler, Marco and Gutmann, Marcus and Holzgrabe, Ulrike and Morschh{\"a}user, Joachim and Meinel, Lorenz}, title = {Azobenzene derivatives with activity against drug-resistant Candida albicans and Candida auris}, series = {Archiv der Pharmazie}, volume = {356}, journal = {Archiv der Pharmazie}, number = {2}, doi = {10.1002/ardp.202200463}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-312295}, year = {2023}, abstract = {Increasing resistance against antimycotic drugs challenges anti-infective therapies today and contributes to the mortality of infections by drug-resistant Candida species and strains. Therefore, novel antifungal agents are needed. A promising approach in developing new drugs is using naturally occurring molecules as lead structures. In this work, 4,4'-dihydroxyazobenzene, a compound structurally related to antifungal stilbene derivatives and present in Agaricus xanthodermus (yellow stainer), served as a starting point for the synthesis of five azobenzene derivatives. These compounds prevented the growth of both fluconazole-susceptible and fluconazole-resistant Candida albicans and Candida auris strains. Further in vivo studies are required to confirm the potential therapeutic value of these compounds.}, language = {en} } @article{LassmannEberlein2023, author = {Lassmann, Michael and Eberlein, Uta}, title = {Comparing absorbed doses and radiation risk of the α-emitting bone-seekers [\(^{223}\)Ra]RaCl\(_2\) and [\(^{224}\)Ra]RaCl\(_2\)}, series = {Frontiers in Medicine}, volume = {9}, journal = {Frontiers in Medicine}, issn = {2296-858X}, doi = {10.3389/fmed.2022.1057373}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-301509}, year = {2023}, abstract = {[\(^{223}\)Ra]RaCl\(_2\) and [\(^{224}\)Ra]RaCl\(_2\) are bone seekers, emitting high LET, and short range (< 100 μm) alpha-particles. Both radionuclides show similar decay properties; the total alpha energies are comparable (\(^{223}\)Ra: ≈28 MeV, \(^{224}\)Ra: ≈26 MeV). [\(^{224}\)Ra]RaCl\(_2\) has been used from the mid-1940s until 1990 for treating different bone and joint diseases with activities of up to approximately 50 MBq [\(^{224}\)Ra]RaCl\(_2\). In 2013 [\(^{223}\)Ra]RaCl\(_2\) obtained marketing authorization by the FDA and by the European Union for the treatment of metastatic prostate cancer with an activity to administer of 0.055 MBq per kg body weight for six cycles. For intravenous injections in humans a model calculation using the biokinetic model of ICRP67 shows a ratio of organ absorbed dose coefficients (\(^{224}\)Ra:\(^{223}\)Ra) between 0.37 (liver) and 0.97 except for the kidneys (2.27) and blood (1.57). For the red marrow as primary organ-at-risk, the ratio is 0.57. The differences are mainly caused be the differing half-lives of the decay products of both radium isotopes. Both radionuclides show comparable DNA damage patterns in peripheral blood mononuclear cells after internal ex-vivo irradiation. Data on the long-term radiation-associated side effects are only available for treatment with [\(^{224}\)Ra]RaCl\(_2\). Two epidemiological studies followed two patient groups treated with [\(^{224}\)Ra]RaCl\(_2\) for more than 25 years. One of them was the "Spiess study", a cohort of 899 juvenile patients who received several injections of [\(^{224}\)Ra]RaCl\(_2\) with a mean specific activity of 0.66 MBq/kg. Another patient group of ankylosing spondylitis patients was treated with 10 repeated intravenous injections of [\(^{224}\)Ra]RaCl\(_2\), 1 MBq each, 1 week apart. In total 1,471 of these patients were followed-up in the "Wick study". In both studies, an increased cancer mortality by leukemia and solid cancers was observed. Similar considerations on long-term effects likely apply to [\(^{223}\)Ra]RaCl\(_2\) as well since the biokinetics are similar and the absorbed doses in the same range. However, this increased risk will most likely not be observed due to the much shorter life expectancy of prostate cancer patients treated with [\(^{223}\)Ra]RaCl\(_2\).}, language = {en} } @misc{WarmdtFrisch2023, author = {Warmdt, Julia and Frisch, Henrik}, title = {Digital Storytelling mit Hund Milo - Eine Geschichte im inklusiven Anfangsunterricht am iPad lesen und weitererz{\"a}hlen}, edition = {2., korrigierte Auflage}, doi = {10.25972/OPUS-30222}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-302226}, year = {2023}, abstract = {„Digital Storytelling mit Hund Milo" beinhaltet neben dem digitalen Bilderbuch „Hund Milo" (Illustration: Lena Kaufmann) auch Zusatzmaterial sowie Aufgaben zur Differenzierung. Das Bilderbuch und alle Materialien wurden f{\"u}r erste und zweite inklusive Klassen mit Kindern der Grundschule und des Schwerpunkts Geistige Entwicklung konzipiert. Ziel ist es, Sch{\"u}ler:innen im inklusiven Anfangsunterricht in multimodale Erz{\"a}hlm{\"o}glichkeiten der App Book Creator einzuf{\"u}hren (Kapitel eins und zwei), mit denen sie anschließend digital eine Geschichte weitererz{\"a}hlen k{\"o}nnen (Kapitel drei und vier). In Kapitel f{\"u}nf wird den Sch{\"u}ler:innen ein m{\"o}gliches Ende der Geschichte angeboten. Alle Materialien wurden mit Blick auf die oben genannten spezifischen Zielgruppen entwickelt und erprobt. Sie sind im Rahmen des BMBF-gef{\"o}rderten Projekts CoTeach-Arbeitspaket 4 „Medienkompetenzen in inklusiven Grundschulklassen im Bereich Digital Storytelling" entstanden, das von Prof Dr. Sanna Pohlmann-Rother und Prof. Dr. Christoph Ratz geleitet wird.}, subject = {Bilderbuch}, language = {de} } @unpublished{FerschMalyRueheetal.2023, author = {Fersch, Daniel and Mal{\´y}, Pavel and R{\"u}he, Jessica and Lisinetskii, Victor and Hensen, Matthias and W{\"u}rthner, Frank and Brixner, Tobias}, title = {Single-Molecule Ultrafast Fluorescence-Detected Pump-Probe Microscopy}, doi = {10.25972/OPUS-31348}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-313485}, year = {2023}, abstract = {We introduce fluorescence-detected pump-probe microscopy by combining a wavelength-tunable ultrafast laser with a confocal scanning fluorescence microscope, enabling access to the femtosecond time scale on the micrometer spatial scale. In addition, we obtain spectral information from Fourier transformation over excitation pulse-pair time delays. We demonstrate this new approach on a model system of a terrylene bisimide (TBI) dye embedded in a PMMA matrix and acquire the linear excitation spectrum as well as time-dependent pump-probe spectra simultaneously. We then push the technique towards single TBI molecules and analyze the statistical distribution of their excitation spectra. Furthermore, we demonstrate the ultrafast transient evolution of several individual molecules, highlighting their different behavior in contrast to the ensemble due to their individual local environment. By correlating the linear and nonlinear spectra, we assess the effect of the molecular environment on the excited-state energy.}, subject = {Fluoreszenz}, language = {en} } @phdthesis{Mims2023, author = {Mims, David}, title = {Einblicke in die Spinchemie durch Untersuchung des Magnetfeldeffektes in rigide gebundenen Radikalionenpaaren}, doi = {10.25972/OPUS-30354}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-303547}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Synthese starrer Donor-Akzeptor-Verbindungen und Untersuchung des Magnetfeldeffektes auf Lebenszeit resultierender Biradikale mittels optischer Spektroskopie.}, subject = {Magnetfeldeffekt}, language = {de} } @phdthesis{Dahinten2023, author = {Dahinten, Anna}, title = {Baghdadit - Biozemente in der Anwendung als endodontischer Funktionswerkstoff}, doi = {10.25972/OPUS-31989}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-319892}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {In k{\"u}rzlich erschienenen Studien hat sich die Zementformulierung Baghdadit (Ca3ZrSi2O9) durch Eigenschaften wie eine hydraulische Aktivit{\"a}t, R{\"o}ntgenopazit{\"a}t und bioaktive Wirkung als potenzielles Material f{\"u}r die endodontische Anwendung qualifiziert. Ziel dieser Studie war es, Baghdadit als einphasigen Biozement und in Form verschiedener Materialzusammensetzungen auf vorteilhafte Eigenschaften im Hinblick auf die Anwendung als endodontischen Funktionswerkstoff zu untersuchen. Nach eigenst{\"a}ndiger Herstellung des mechanisch aktivierten Zementpulvers Ca3ZrSi2O9, erfolgte die Charakterisierung der verschiedenen Zementformulierungen maBag, Bag100Bru und Bag50Bru hinsichtlich der Injizierbarkeit, des pH-Verlaufs w{\"a}hrend der Abbindung, der Druckfestigkeit und Phasenzusammensetzung mittels XRD. Daneben wurde Baghdadit zu je drei verschiedenen Gewichtsanteilen als F{\"u}llstoff in eine Methacrylat-basierte Matrix integriert und hinsichtlich der Fließf{\"a}higkeit entsprechend der Norm DIN EN ISO 6876:2012, des qualitativen Polymerisationsgrads und der Druckfestigkeit gepr{\"u}ft. Mit einer Auswahl der oben genannten Materialien erfolgte die Untersuchung der antibakteriellen Wirksamkeit, der R{\"o}ntgensichtbarkeit orientierend an der Norm DIN EN ISO 13116:2014 und der Dichtigkeit im Wurzelkanal.}, subject = {Endodontie}, language = {de} } @phdthesis{Lenard2023, author = {Lenard, Chris}, title = {Ans{\"a}tze zur informatik-gest{\"u}tzten Vorherbestimmung der Behandlungszeit anhand von Befundungsdaten bei Kontroll- und Schmerzf{\"a}llen in der Zahnarztpraxis}, doi = {10.25972/OPUS-32034}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-320348}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Diese retrospektive Studie untersuchte Patientenakten des elektronischen Karteikartensystems einer privaten Zahnarztpraxis von Patienten, welche zur Kontrolluntersuchung oder wegen Schmerzen vorstellig waren. Ziel der Studie war das Entwickeln von Methoden zur Vorhersage der Behandlungszeit f{\"u}r zuk{\"u}nftige Termine anhand verschiedener Patienteninformationen. Mittels statistischer deskriptiver Auswertung wurden die erfassten Daten untersucht und Korrelationen in Hinblick auf die Behandlungsdauer zwischen den verschiedenen Attributen hergestellt. Es wurden verschiedene Methoden zur Vorherbestimmung der Behandlungsdauer aufgestellt und auf ihr Optimierungspotential getestet. Die Methode mit dem h{\"o}chsten Optimierungswert war ein Ansatz maschinellen Lernens. Der entworfene Algorithmus berechnete Behandlungszeiten der Testgruppe anhand eines Neuronalen Netzes, welches durch Trainieren mit den Daten der Untersuchungsgruppe erstellt wurde.}, subject = {Maschinelles Lernen}, language = {de} } @phdthesis{Mueller2023, author = {M{\"u}ller, Annika Wiebke}, title = {Funktionalit{\"a}t eines \(Stathmin\)-Promotor-Polymorphismus}, doi = {10.25972/OPUS-31812}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-318120}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Bereits in vorausgegangenen Studien konnte nachgewiesen werden, dass das Stathmin-Gen eine entscheidende Rolle im Hinblick auf erlernte und angeborene Angstreaktionen spielt. So konnte Frau Dr. Julia Katharina Heupel in ihrer Arbeit aus dem Jahr 2013 eine Assoziation eines (TAA)n-Polymorphismus, welcher sich ca. 2 kb upstream des ersten Exons des Stathmin-Gens und ca. 4 kb upstream des Translationsstarts befindet, mit Cluster-C-Pers{\"o}nlichkeitsst{\"o}rungen belegen. Sie vermutete, dass eine Hochregulation der Expression des Stathmin-Gens ein Risikofaktor f{\"u}r die Entstehung von Cluster C Pers{\"o}nlichkeitsst{\"o}rungen darstellen k{\"o}nnte. Da sich der beschriebene Polymorphismus in der Promotor-Region des Stathmin-Gens befindet, ist eine allelspezifische Auswirkung auf die Genexpression vorstellbar. Um diese Vermutung zu st{\"u}tzen, wurde in dieser Arbeit die Auswirkung zweier Allele des STR-Polymorphismus im Bereich der Promotorregion des Stathmin-Gens im Hinblick auf die Promotoraktivit{\"a}t untersucht. Hierzu wurde die zu untersuchende Sequenz zun{\"a}chst mittels Polymerase-Ketten-Reaktion vervielf{\"a}ltigt und anschließend in einen pGL4.23.Vektor kloniert. Im Anschluss daran erfolgte die Untersuchung der Promotoraktivit{\"a}t mittels eines Luciferase-Assays in der humanen Neuroblastomzelllinie SH-SY5Y. Nach statischer Auswertung der Messreihen zeigte sich eine signifikant h{\"o}here Luciferase-Aktivit{\"a}t des STR-Polymorphismus (TAA)12 im Vergleich zu dem STR-Polymorphismus (TAA)13. Hierdurch kann von einer h{\"o}heren Promotoraktivit{\"a}t bei dem Genotyp (TAA)12 gegen{\"u}ber dem Genotyp (TAA)13 ausgegangen werden. Zusammenfassend unterst{\"u}tzen die Ergebnisse dieser Arbeit die These, dass es sich bei dem Stathmin-Gen um ein Suszeptibilit{\"a}tsgen f{\"u}r die Entstehung von Cluster C Pers{\"o}nlichkeitsst{\"o}rungen handeln k{\"o}nnte.}, subject = {Pers{\"o}nlichkeitsst{\"o}rung}, language = {de} } @phdthesis{Kroschewski2023, author = {Kroschewski, Miriam}, title = {Kardinalverst{\"a}ndnis von Sch{\"u}ler:innen mit sonderp{\"a}dagogischem Schwerpunkt Geistige Entwicklung: Quantitative Querschnittsstudie zur Analyse dom{\"a}nenspezifischer und dom{\"a}nen{\"u}bergreifender Faktoren}, doi = {10.25972/OPUS-31665}, url = {http://nbn-resolving.de/urn:nbn:de:bvb:20-opus-316653}, school = {Universit{\"a}t W{\"u}rzburg}, year = {2023}, abstract = {Das Kardinalverst{\"a}ndnis, also die erfolgreiche Verkn{\"u}pfung von Zahlen und dazugeh{\"o}rigen Mengen, stellt die zentrale Kompetenz im Zuge der numerischen Entwicklung dar. Nur auf der Grundlage des Kardinalverst{\"a}ndnisses kann es gelingen, ein weiterf{\"u}hrendes mathematisches Verst{\"a}ndnis zu erreichen. Die mathematischen Kompetenzen von Sch{\"u}ler:innen mit sonderp{\"a}dagogischem Schwerpunkt Geistige Entwicklung waren bis heute eher selten Gegenstand der Forschung, obgleich das Wissen {\"u}ber die Zusammenh{\"a}nge einzelner dom{\"a}nenspezifischer Kompetenzen f{\"u}r eine bestm{\"o}gliche F{\"o}rderung ausschlaggebend ist. Daher wird in dieser Arbeit der Frage nachgegangen, welchen Einfluss Zahl-Gr{\"o}ßen-Kompetenzen auf die zentrale Kompetenz des Kardinalverst{\"a}ndnisses bei Sch{\"u}ler:innen mit sonderp{\"a}dagogischem Schwerpunkt Geistige Entwicklung haben. Hierf{\"u}r wurde ausgehend vom Modell der Zahl-Gr{\"o}ßen-Verkn{\"u}pfung (ZGV-Modell) von Krajewski (2013) ein Lehrkr{\"a}ftefragebogen entwickelt. Im Mai/Juni 2019 sch{\"a}tzten Lehrkr{\"a}fte von 20 bayerischen Schulen die Kompetenzen ihre Sch{\"u}ler:innen mit sonderp{\"a}dagogischem Schwerpunkt Geistige Entwicklung ein. Die geschichtete Clusterstichprobe (Schichtvariablen: Schulkonzeption, Siedlungsstruktur und Regierungsbezirke in Bayern) umfasste 1 082 Lehrkr{\"a}ftefrageb{\"o}-gen, die Sch{\"u}ler:innen waren zwischen 6 und 21 Jahre alt. Durch die Verkn{\"u}pfung dieser Arbeit mit der Studie SFGE II (Sch{\"u}lerschaft mit dem F{\"o}rderschwerpunkt Geistige Entwicklung II, Baumann et al., 2021) konnten außerdem dom{\"a}nen{\"u}bergreifende Faktoren (z. B. Alter, Grad der Intelligenzminderung, Lesef{\"a}higkeiten) erhoben werden. Anhand dieser Kontrollvariablen ließ sich der tats{\"a}chliche Einfluss der dom{\"a}nenspezifischen Zahl-Gr{\"o}ßen-Kompetenzen auf das Kardinalverst{\"a}ndnis zeigen und so feststellen, dass der Grad der Intelligenzminderung einen großen Teil der Varianz des Kardinalverst{\"a}ndnisses aufkl{\"a}rt. Die Hinzunahme der dom{\"a}nenspezifischen Faktoren ergab eine nochmals bessere Erkl{\"a}rungsg{\"u}te. Zudem steht das buchstabenweise Erlesen von W{\"o}rtern in einem engen Zusammenhang mit dem erfolgreichen Beherrschen des Kardinalverst{\"a}ndnisses. Mit dieser Erhebung konnte nicht nur die zentrale Bedeutung des numerischen Vorwissens in Abh{\"a}ngigkeit von den Zahlraumstufen f{\"u}r das Kardinalverst{\"a}ndnis bei Sch{\"u}ler:innen mit sonderp{\"a}dagogischem Schwerpunkt Geistige Entwicklung, sondern auch die Intelligenzminderung als relevante Einflussgr{\"o}ße nachgewiesen werden.}, subject = {Kardinalzahl}, language = {de} }