TY - INPR A1 - Wohlgemuth, Matthias A1 - Mitric, Roland T1 - Excitation energy transport in DNA modelled by multi-chromophoric field-induced surface hopping T2 - Physical Chemistry Chemical Physics N2 - Absorption of ultraviolet light is known as a major source of carcinogenic mutations of DNA. The underlying processes of excitation energy dissipation are yet not fully understood. In this work we provide a new and generally applicable route for studying the excitation energy transport in multi-chromophoric complexes at an atomistic level. The surface-hopping approach in the frame of the extended Frenkel exciton model combined with QM/MM techniques allowed us to simulate the photodynamics of the alternating (dAdT)10 : (dAdT)10 double-stranded DNA. In accordance with recent experiments, we find that the excited state decay is multiexponential, involving a long and a short component which are due to two distinct mechanisms: formation of long-lived delocalized excitonic and charge transfer states vs. ultrafast decaying localized states resembling those of the bare nucleobases. Our simulations explain all stages of the ultrafast photodynamics including initial photoexcitation, dynamical evolution out of the Franck-Condon region, excimer formation and nonradiative relaxation to the ground state. KW - Photodynamics KW - DNA Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-209467 ET - submitted version ER - TY - INPR A1 - Humeniuk, Alexander A1 - Bužančić, Margarita A1 - Hoche, Joscha A1 - Cerezo, Javier A1 - Mitric, Roland A1 - Santoro, Fabrizio A1 - Bonačić-Koutecky, Vlasta T1 - Predicting fluorescence quantum yields for molecules in solution: A critical assessment of the harmonic approximation and the choice of the lineshape function T2 - The Journal of Chemical Physics N2 - For the rational design of new fluorophores, reliable predictions of fluorescence quantum yields from first principles would be of great help. However, efficient computational approaches for predicting transition rates usually assume that the vibrational structure is harmonic. While the harmonic approximation has been used successfully to predict vibrationally resolved spectra and radiative rates, its reliability for non-radiative rates is much more questionable. Since non-adiabatic transitions convert large amounts of electronic energy into vibrational energy, the highly excited final vibrational states deviate greatly from harmonic oscillator eigenfunctions. We employ a time-dependent formalism to compute radiative and non-radiative rates for transitions and study the dependence on model parameters. For several coumarin dyes we compare different adiabatic and vertical harmonic models (AS, ASF, AH, VG, VGF, VH), in order to dissect the importance of displacements, frequency changes and Duschinsky rotations. In addition we analyze the effect of different broadening functions (Gaussian, Lorentzian or Voigt). Moreover, to assess the qualitative influence of anharmonicity on the internal conversion rate, we develop a simplified anharmonic model. We adress the reliability of these models considering the potential errors introduced by the harmonic approximation and the phenomenological width of the broadening function. KW - fluorescence quantum yield Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-199305 UR - https://doi.org/10.1063/1.5143212 N1 - Accepted Manuscript. N1 - This article may be downloaded for personal use only. Any other use requires prior permission of the author and AIP Publishing. This article appeared in A. Humeniuk et al. J. Chem. Phys. 152, 054107 (2020); https://doi.org/10.1063/1.5143212 and may be found at https://doi.org/10.1063/1.5143212. ER - TY - INPR A1 - Titov, Evgenii A1 - Humeniuk, Alexander A1 - Mitric, Roland T1 - Comparison of moving and fixed basis sets for nonadiabatic quantum dynamics at conical intersections T2 - Chemical Physics N2 - We assess the performance of two different types of basis sets for nonadiabatic quantum dynamics at conical intersections. The basis sets of both types are generated using Ehrenfest trajectories of nuclear coherent states. These trajectories can either serve as a moving (time-dependent) basis or be employed to sample a fixed (time-independent) basis. We demonstrate on the example of two-state two-dimensional and three-state five-dimensional models that both basis set types can yield highly accurate results for population transfer at intersections, as compared with reference quantum dynamics. The details of wave packet evolutions are discussed for the case of the two-dimensional model. The fixed basis is found to be superior to the moving one in reproducing nonlocal spreading and maintaining correct shape of the wave packet upon time evolution. Moreover, for the models considered, the fixed basis set outperforms the moving one in terms of computational efficiency. KW - Nonadiabatic quantum dynamics Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-199225 UR - https://doi.org/10.1016/j.chemphys.2019.110526 N1 - Submitted version ER - TY - INPR A1 - Lindner, Joachim O. A1 - Sultangaleeva, Karina A1 - Röhr, Merle I. S. A1 - Mitric, Roland T1 - metaFALCON: A program package for automatic sampling of conical intersection seams using multistate metadynamics T2 - Journal of Chemical Theory and Computation N2 - The multistate metadynamics for automatic exploration of conical intersection seams and systematic location of minimum energy crossing points in molecular systems and its implementation into the software package metaFALCON is presented. Based on a locally modified energy gap between two Born–Oppenheimer electronic states as a collective variable, multistate metadynamics trajectories are driven toward an intersection point starting from an arbitrary ground state geometry and are subsequently forced to explore the conical intersection seam landscape. For this purpose, an additional collective variable capable of distinguishing structures within the seam needs to be defined and an additional bias is introduced into the off-diagonal elements of an extended (multistate) electronic Hamiltonian. We demonstrate the performance of the algorithm on the examples of the 1,3-butadiene, benzene, and 9H-adenine molecules, where multiple minimum energy crossing points could be systematically located using the Wiener number or Cremer–Pople parameters as collective variables. Finally, with the example of 9H-adenine, we show that the multistate metadynamics potential can be used to obtain a global picture of a conical intersection seam. Our method can be straightforwardly connected with any ab initio or semiempirical electronic structure theory that provides energies and gradients of the respective electronic states and can serve for systematic elucidation of the role of conical intersections in the photophysics and photochemistry of complex molecular systems, thus complementing nonadiabatic dynamics simulations. KW - Computational Chemistry KW - Metadynamics KW - Hydrogen KW - Hydrocarbons KW - Chemical Structure Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-199258 UR - https://doi.org/10.1021/acs.jctc.9b00029 N1 - This document is the Accepted Manuscript version of a Published Work that appeared in final form in Journal of Chemical Theory and Computation, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see Journal of Chemical Theory and Computation 2019, 15, 6, 3450-3460. https://doi.org/10.1021/acs.jctc.9b00029. ER - TY - INPR A1 - Lisinetskaya, Polina G. A1 - Mitric, Roland T1 - Collective Response in DNA-Stabilized Silver Cluster Assemblies from First-Principles Simulations T2 - The Journal of Physical Chemistry Letters N2 - We investigate fluorescence resonant energy transfer and concurrent electron dynamics in a pair of DNA-stabilized silver clusters. For this purpose we introduce a methodology for the simulation of collective optoelectronic properties of coupled molecular aggregates starting from first-principles quantum chemistry, which can be further applied to a broad range of coupled molecular systems to study their electro-optical response. Our simulations reveal the existence of low-energy coupled excitonic states, which enable ultrafast energy transport between subunits, and give insight into the origin of the fluorescence signal in coupled DNA-stabilized silver clusters, which have been recently experimentally detected. Hence, we demonstrate the possibility of constructing ultrasmall energy transmission lines and optical converters based on these hybrid molecular systems. KW - Metal clusters Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-198729 UR - https://doi.org/10.1021/acs.jpclett.9b03136 N1 - This document is the unedited Author’s version of a Submitted Work that was subsequently accepted for publication in Journal of Physical Chemistry A, copyright © American Chemical Society after peer review. To access the final edited and published work see The Journal of Physical Chemistry Letters 2019, 10, 24, 7884-7889. https://doi.org/10.1021/acs.jpclett.9b03136. ER - TY - INPR A1 - Röder, Anja A1 - Petersen, Jens A1 - Issler, Kevin A1 - Fischer, Ingo A1 - Mitric, Roland A1 - Poisson, Lionel T1 - Exploring the Excited-State Dynamics of Hydrocarbon Radicals, Biradicals and Carbenes using Time-Resolved Photoelectron Spectroscopy and Field-Induced Surface Hopping Simulations T2 - The Journal of Physical Chemistry A N2 - Reactive hydrocarbon molecules like radicals, biradicals and carbenes are not only key players in combustion processes and interstellar and atmospheric chemistry, but some of them are also important intermediates in organic synthesis. These systems typically possess many low-lying, strongly coupled electronic states. After light absorption, this leads to rich photodynamics characterized by a complex interplay of nuclear and electronic motion, which is still not comprehensively understood and not easy to investigate both experimentally and theoretically. In order to elucidate trends and contribute to a more general understanding, we here review our recent work on excited-state dynamics of open-shell hydrocarbon species using time-resolved photoelectron spectroscopy and field-induced surface hopping simulations, and report new results on the excited-state dynamics of the tropyl and the 1-methylallyl radical. The different dynamics are compared, and the difficulties and future directions of time-resolved photoelectron spectroscopy and excited state dynamics simulations of open-shell hydrocarbon molecules are discussed. KW - Excited state dynamics KW - Hydrocarbon radicals KW - time-resolved photoelectron spectroscopy KW - field-induced surface hopping Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-198734 UR - https://doi.org/10.1021/acs.jpca.9b06346 N1 - This document is the unedited Author’s version of a Submitted Work that was subsequently accepted for publication in Journal of Physical Chemistry A, copyright © American Chemical Society after peer review. To access the final edited and published work see Journal of Physical Chemistry A 2019, 123, 50, 10643-10662. https://doi.org/10.1021/acs.jpca.9b06346. ER - TY - INPR A1 - Titov, Evgenii A1 - Humeniuk, Alexander A1 - Mitric, Roland T1 - Exciton localization in excited-state dynamics of a tetracene trimer: A surface hopping LC-TDDFTB study T2 - Physical Chemistry Chemical Physics N2 - Excitons in the molecular aggregates of chromophores are key participants in important processes such as photosynthesis or the functioning of organic photovoltaic devices. Therefore, the exploration of exciton dynamics is crucial. Here we report on exciton localization during excited-state dynamics of the recently synthesized tetracene trimer [Liu et al., Org. Lett., 2017, 19, 580]. We employ the surface hopping approach to nonadiabatic molecular dynamics in conjunction with the long-range corrected time-dependent density functional tight binding (LC-TDDFTB) method [Humeniuk and Mitrić, Comput. Phys. Commun., 2017, 221, 174]. Utilizing a set of descriptors based on the transition density matrix, we perform comprehensive analysis of exciton dynamics. The obtained results reveal an ultrafast exciton localization to a single tetracene unit of the trimer during excited-state dynamics, along with exciton transfer between units. KW - Exciton dynamics Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-198680 UR - https://doi.org/10.1039/C8CP05240A N1 - Accepted Manuscript ER - TY - INPR A1 - Auerhammer, Nina A1 - Schulz, Alexander A1 - Schmiedel, Alexander A1 - Holzapfel, Marco A1 - Hoche, Joscha A1 - Röhr, Merle I. S. A1 - Mitric, Roland A1 - Lambert, Christoph T1 - Dynamic exciton localisation in a pyrene-BODIPY-pyrene dye conjugate T2 - Physical Chemistry Chemical Physics N2 - The photophysics of a molecular triad consisting of a BODIPY dye and two pyrene chromophores attached in 2-position are investigated by steady state and fs-time resolved transient absorption spectroscopy as well as by field induced surface hopping (FISH) simulations. While the steady state measurements indicate moderate chromophore interactions within the triad, the time resolved measurements show upon pyrene excitation a delocalised excited state which localises onto the BODIPY chromophore with a time constant of 0.12 ps. This could either be interpreted as an internal conversion process within the excitonically coupled chromophores or as an energy transfer from the pyrenes to the BODIPY dye. The analysis of FISH-trajectories reveals an oscillatory behaviour where the excitation hops between the pyrene units and the BODIPY dye several times until finally they become localised on the BODIPY chromophore within 100 fs. This is accompanied by an ultrafast nonradiative relaxation within the excitonic manifold mediated by the nonadiabatic coupling. Averaging over an ensemble of trajectories allowed us to simulate the electronic state population dynamics and determine the time constants for the nonradiative transitions that mediate the ultrafast energy transfer and exciton localisation on BODIPY. KW - Exciton localization dynamics Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-198718 UR - https://doi.org/10.1039/C9CP00908F N1 - Accepted manuscript ER - TY - JOUR A1 - Hohmann, Cynthia A1 - Pinart, Mariona A1 - Tischer, Christina A1 - Gehring, Ulrike A1 - Heinrich, Joachim A1 - Kull, Inger A1 - Melén, Eric A1 - Smit, Henriette A. A1 - Torrent, Maties A1 - Wijga, Alet H. A1 - Wickman, Magnus A1 - Bachert, Claus A1 - Lødrup Carlsen, Karin C. A1 - Carlsen, Kai-Håkon A1 - Bindslev-Jensen, Carsten A1 - Eller, Esben A1 - Esplugues, Ana A1 - Fantini, Maria Pia A1 - Annesi-Maesano, Isabella A1 - Momas, Isabelle A1 - Porta, Daniela A1 - Vassilaki, Maria A1 - Waiblinger, Dagmar A1 - Sunyer, Jordi A1 - Antó, Josep M. A1 - Bousquet, Jean A1 - Keil, Thomas T1 - The Development of the MeDALL Core Questionnaires for a Harmonized Follow-Up Assessment of Eleven European Birth Cohorts on Asthma and Allergies JF - International Archives of Allergy and Immunology N2 - Background: Numerous birth cohorts have been initiated in the world over the past 30 years using heterogeneous methods to assess the incidence, course and risk factors of asthma and allergies. The aim of the present work is to provide the stepwise proceedings of the development and current version of the harmonized MeDALL-Core Questionnaire (MeDALL-CQ) used prospectively in 11 European birth cohorts. Methods: The harmonization of questions was accomplished in 4 steps: (i) collection of variables from 14 birth cohorts, (ii) consensus on questionnaire items, (iii) translation and back-translation of the harmonized English MeDALL-CQ into 8 other languages and (iv) implementation of the harmonized follow-up. Results: Three harmonized MeDALL-CQs (2 for parents of children aged 4-9 and 14-18, 1 for adolescents aged 14-18) were developed and used for a harmonized follow-up assessment of 11 European birth cohorts on asthma and allergies with over 13,000 children. Conclusions: The harmonized MeDALL follow-up produced more comparable data across different cohorts and countries in Europe and will offer the possibility to verify results of former cohort analyses. Thus, MeDALL can become the starting point to stringently plan, conduct and support future common asthma and allergy research initiatives in Europe. KW - harmonization KW - MeDALL KW - european birth cohorts KW - asthma KW - allergy KW - questionnaire assessment Y1 - 2014 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-196594 SN - 1018-2438 SN - 1423-0097 VL - 163 IS - 3 ER - TY - JOUR A1 - Münst, Bernhard A1 - Thier, Marc Christian A1 - Winnemöller, Dirk A1 - Helfen, Martina A1 - Thummer, Rajkumar P. A1 - Edenhofer, Frank T1 - Nanog induces suppression of senescence through downregulation of p27\(^{KIP1}\) expression JF - Journal of Cell Science N2 - A comprehensive analysis of the molecular network of cellular factors establishing and maintaining pluripotency as well as self renewal of pluripotent stem cells is key for further progress in understanding basic stem cell biology. Nanog is necessary for the natural induction of pluripotency in early mammalian development but dispensable for both its maintenance and its artificial induction. To gain further insight into the molecular activity of Nanog, we analyzed the outcomes of Nanog gain-of-function in various cell models employing a recently developed biologically active recombinant cell-permeant protein, Nanog-TAT. We found that Nanog enhances the proliferation of both NIH 3T3 and primary fibroblast cells. Nanog transduction into primary fibroblasts results in suppression of senescence-associated beta-galactosidase activity. Investigation of cell cycle factors revealed that transient activation of Nanog correlates with consistent downregulation of the cell cycle inhibitor p27\(^{KIP1}\) (also known as CDKN1B). By performing chromatin immunoprecipitation analysis, we confirmed bona fide Nanog-binding sites upstream of the p27\(^{KIP1}\) gene, establishing a direct link between physical occupancy and functional regulation. Our data demonstrates that Nanog enhances proliferation of fibroblasts through transcriptional regulation of cell cycle inhibitor p27 gene. KW - Embryonic stem cell KW - Protein transduction KW - Pluripotency KW - Senescence KW - Cell reprogramming KW - p27(KIP1) Y1 - 2016 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-190761 VL - 129 IS - 5 ER - TY - INPR A1 - Maghami, Mohammad Ghaem A1 - Scheitl, Carolin P. M. A1 - Höbartner, Claudia T1 - Direct in vitro selection of trans-acting ribozymes for posttranscriptional, site-specific, and covalent fluorescent labeling of RNA T2 - Journal of the American Chemical Society N2 - General and efficient tools for site-specific fluorescent or bioorthogonal labeling of RNA are in high demand. Here, we report direct in vitro selection, characterization, and application of versatile trans-acting 2'-5' adenylyl transferase ribozymes for covalent and site-specific RNA labeling. The design of our partially structured RNA pool allowed for in vitro evolution of ribozymes that modify a predetermined nucleotide in cis (i.e. intramolecular reaction), and were then easily engineered for applications in trans (i.e. in an intermolecular setup). The resulting ribozymes are readily designed for specific target sites in small and large RNAs and accept a wide variety of N6-modified ATP analogues as small molecule substrates. The most efficient new ribozyme (FH14) shows excellent specificity towards its target sequence also in the context of total cellular RNA. KW - covalent and site-specific RNA labeling KW - trans-acting 2'-5' adenylyl transferase ribozymes KW - in vitro selection from a structured RNA library KW - Ribozyme-catalyzed RNA labeling KW - intermolecular applications of ribozymes Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-192333 N1 - This document is the unedited Author’s version of a Submitted Work that was subsequently accepted for publication in Journal of the American Chemical Society, copyright © American Chemical Society after peer review. To access the final edited and published work see https://doi.org/10.1021/jacs.9b10531. ER - TY - THES A1 - Redlich, Sarah T1 - Opportunities and obstacles of ecological intensification: Biological pest control in arable cropping systems T1 - Chancen und Hürden Ökologischer Intensivierung: Biologische Schädlingsbekämpfung im Ackerbau N2 - Modern agriculture is the basis of human existence, a blessing, but also a curse. It provides nourishment and well-being to the ever-growing human population, yet destroys biodiversity-mediated processes that underpin productivity: ecosystem services such as water filtration, pollination and biological pest control. Ecological intensification is a promising alternative to conventional farming, and aims to sustain yield and ecosystem health by actively managing biodiversity and essential ecosystem services. Here, I investigate opportunities and obstacles for ecological intensification. My research focuses on 1) the relative importance of soil, management and landscape variables for biodiversity and wheat yield (Chapter II); 2) the influence of multi-scale landscape-level crop diversity on biological pest control in wheat (Chapter III) and 3) on overall and functional bird diversity (Chapter IV). I conclude 4) by introducing a guide that helps scientists to increase research impact by acknowledging the role of stakeholder engagement for the successful implementation of ecological intensification (Chapter V). Ecological intensification relies on the identification of natural pathways that are able to sustain current yields. Here, we crossed an observational field study of arthropod pests and natural enemies in 28 real-life wheat systems with an orthogonal on-field insecticide-fertilizer experiment. Using path analysis, we quantified the effect of 34 factors (soil characteristics, recent and historic crop management, landscape heterogeneity) that directly or indirectly (via predator-prey interactions) contribute to winter wheat yield. Reduced soil preparation and high crop rotation diversity enhanced crop productivity independent of external agrochemical inputs. Concurrently, biological control by arthropod natural enemies could be restored by decreasing average field sizes on the landscape scale, extending crop rotations and reducing soil disturbance. Furthermore, reductions in agrochemical inputs decreased pest abundances, thereby facilitating yield quality. Landscape-level crop diversity is a promising tool for ecological intensification. However, biodiversity enhancement via diversification measures does not always translate into agricultural benefits due to antagonistic species interactions (intraguild predation). Additionally, positive effects of crop diversity on biological control may be masked by inappropriate study scales or correlations with other landscape variables (e.g. seminatural habitat). Therefore, the multiscale and context-dependent impact of crop diversity on biodiversity and ecosystem services is ambiguous. In 18 winter wheat fields along a crop diversity gradient, insect- and bird-mediated pest control was assessed using a natural enemy exclusion experiment with cereal grain aphids. Although birds did not influence the strength of insect-mediated pest control, crop diversity (rather than seminatural habitat cover) enhanced aphid regulation by up to 33%, particularly on small spatial scales. Crop diversification, an important Greening measure in the European Common Agricultural Policy, can improve biological control, and could lower dependence on insecticides, if the functional identity of crops is taken into account. Simple measures such as ‘effective number of crop types’ help in science communication. Although avian pest control did not respond to landscape-level crop diversity, birds may still benefit from increased crop resources in the landscape, depending on their functional grouping (feeding guild, conservation status, habitat preference, nesting behaviour). Observational studies of bird functional diversity on 14 wheat study fields showed that non-crop landscape heterogeneity rather than crop diversity played a key role in determining the richness of all birds. Insect-feeding, non-farmland and non-threatened birds increased across multiple spatial scales (up to 3000 m). Only crop-nesting farmland birds declined in heterogeneous landscapes. Thus, crop diversification may be less suitable for conserving avian diversity, but abundant species benefit from overall habitat heterogeneity. Specialist farmland birds may require more targeted management approaches. Identifying ecological pathways that favour biodiversity and ecosystem services provides opportunities for ecological intensification that increase the likelihood of balancing conservation and productivity goals. However, change towards a more sustainable agriculture will be slow to come if research findings are not implemented on a global scale. During dissemination activities within the EU project Liberation, I gathered information on the advantages and shortcomings of ecological intensification and its implementation. Here, I introduce a guide (‘TREE’) aimed at scientists that want to increase the impact of their research. TREE emphasizes the need to engage with stakeholders throughout the planning and research process, and actively seek and promote science dissemination and knowledge implementation. This idea requires scientists to leave their comfort zone and consider socioeconomic, practical and legal aspects often ignored in classical research. Ecological intensification is a valuable instrument for sustainable agriculture. Here, I identified new pathways that facilitate ecological intensification. Soil quality, disturbance levels and spatial or temporal crop diversification showed strong positive correlations with natural enemies, biological pest control and yield, thereby lowering the dependence on agrochemical inputs. Differences between functional groups caused opposing, scale-specific responses to landscape variables. Opposed to our predictions, birds did not disturb insect-mediated pest control in our study system, nor did avian richness relate to landscape-level crop diversity. However, dominant functional bird groups increased with non-crop landscape heterogeneity. These findings highlight the value of combining different on-field and landscape approaches to ecological intensification. Concurrently, the success of ecological intensification can be increased by involving stakeholders throughout the research process. This increases the quality of science and reduces the chance of experiencing unscalable obstacles to implementation. N2 - Die moderne Landwirtschaft ist die Grundlage menschlichen Lebens, ein Segen, aber auch ein Fluch. Sie stellt Nahrung und Wohlstand für die immerfort wachsende menschliche Bevölkerung bereit, und zerstört gleichzeitig Biodiversitäts-geförderte Prozesse, welche die Produktivität unterstützen: Ökosystemdienstleistungen wie Wasseraufbereitung, Bestäubung und biologische Schädlingsbekämpfung. Ökologische Intensivierung ist eine vielversprechende Alternative zur konventionellen Landwirtschaft, und zielt darauf aus, Erträge und die Gesundheit von Ökosystemen zu erhalten indem Biodiversität und essentielle Ökosystemdienstleistungen aktiv gemanagt werden. In meiner Doktorarbeit untersuche ich die Chancen und Hürden Ökologischer Intensivierung. Das Hauptinteresse meiner Forschung liegt bei 1) der relativen Bedeutung von Boden, Bewirtschaftung und Landschaftsaspekten für Biodiversität und Weizenerträge (Kapitel II); 2) dem Einfluss regionaler Anbauvielfalt auf verschiedenen räumlichen Skalen auf die biologische Schädlingsbekämpfung in Weizen (Kapitel III) und 3) auf die gesamte und funktionelle Artenvielfalt von Vögeln (Kapitel IV). Zum Schluss 4) stelle ich einen Leitfaden vor, der Wissenschaftlern hilft die Wirkung ihrer Forschung zu erhöhen, indem die fundamentale Rolle von Stakeholdern für die Umsetzung Ökologischer Intensivierung besser genutzt wird (Kapitel V). Ökologische Intensivierung bedarf der Identifizierung von natürlichen Prozessen, die zum Erhalt landwirtschaftlicher Erträge beitragen. Zu diesem Zweck verknüpften wir eine Beobachtungsstudie, in der Schädlinge und natürliche Gegenspieler in 28 realen Weizen Anbausystem aufgenommen wurden, mit einem orthogonalen Feldexperiment (Insektizid und mineralische Düngung). Anhand einer Pfadanalyse quantifizierten wir den Einfluss von 34 Faktoren (Bodencharakteristiken, gegenwärtige und vergangene Bewirtschaftung, Landschaftsheterogenität), die direkt oder indirekt (über Räuber-Beute-Interaktionen) Einfluss auf den Winterweizenertrag ausüben. Reduzierte Bodenbearbeitung und vielfältige Fruchtfolgen erhöhten die Erträge unabhängig von der Ausbringung von Agrochemikalien. Gleichzeitig könnte die biologische Schädlingsbekämpfung durch räuberische Insekten wiederhergestellt werden, indem durchschnittliche Schlaggrößen auf der Landschaftsebene verringert, Fruchtfolgen erweitert und die Bodenbearbeitung reduziert wird. Des Weiteren senkte der Verzicht auf Agrochemikalien das Schädlingsaufkommen einiger Arten, und trug zu einer höheren Ertragsqualität bei. Regionale Anbauvielfalt ist ein vielversprechendes Mittel zur Ökologischen Intensivierung. Doch die Erhöhung der Artenvielfalt durch Diversifizierungsmaßnahmen führt nicht immer zu Vorteilen in der Landwirtschaft, vor allem auf Grund antagonistischer Wechselwirkungen zwischen verschiedenen Arten (intraguild predation). Weiterhin können positive Effekte der Anbauvielfalt durch die Wahl der falschen räumlichen Skala oder durch Korrelationen mit anderen Landschaftsvariablen (z.B. halbnatürliche Habitate) überdeckt werden. Aus diesem Grund bestehen Unklarheiten über die Wirkung von Anbauvielfalt auf Biodiversität und Ökosystemdienstleistungen in unterschiedlichen räumlichen Skalen und Kontexten. Durch Ausschlussexperimente mit Getreideblattläusen untersuchten wir die biologische Schädlingsbekämpfung durch räuberische Insekten und Vögel in 18 Winterweizenfeldern innerhalb eines Landschaftsgradienten der Anbauvielfalt. Vögel hatten keinen Einfluss auf die biologische Schädlingsbekämpfung durch Insekten. Anbauvielfalt (nicht das Vorkommen halbnatürlicher Habitate) erhöhte die Schädlingsbekämpfung um bis zu 33%, vor allem auf kleinen räumlichen Skalen. Somit kann die Steigerung der Anbauvielfalt, eine wichtige Säule der Europäischen Gemeinsamen Agrarpolitik, die biologische Schädlingsbekämpfung verbessern und den Einsatz von Agrochemikalien verringern, solange die funktionelle Gruppe der Anbaupflanzen berücksichtigt wird. Einfache Maßeinheiten wie die ‘effektive Anzahl an Kulturpflanzengruppen‘ helfen in der Kommunikation wissenschaftlicher Ergebnisse. Obwohl die Schädlingsbekämpfung durch Vögel nicht durch regionale Anbauvielfalt beeinflusst wurde, könnten Vögel, abhängig von der Zugehörigkeit zu bestimmten funktionellen Gruppen (Ernährung, Gefährdungsstatus, Lebensraum, Nistplatzwahl), dennoch von erhöhten Ressourcen auf landwirtschaftlichen Flächen profitieren. In einer Beobachtungsstudie wurde die funktionelle Vielfalt von Vögeln auf 14 Winterweizenfeldern aufgenommen. Die Studie zeigte, dass die nicht agrarisch genutzte Landschaftsheterogenität im Vergleich zur regionalen Anbauvielfalt eine übergeordnete Rolle für die Artenvielfalt spielte, vor allem für Insektenfresser, Vögel die außerhalb landwirtschaftlicher Flächen siedeln oder nicht in ihrem Bestand gefährdet sind. Effekte waren auf allen Skalen sichtbar (bis zu 3000m). Nur Acker-nistende Agrarvögel zeigten negative Beziehungen zu Landschaftsheterogenität. Der Nutzen der Anbaudiversifizierung scheint weniger Bedeutung für den Vogelschutz zu haben als die übergeordnete Vielfalt der Landschaft, welche den Artenreichtum häufiger Vogelarten erhöhte. Spezialisierte Vogelarten dagegen bedürfen eines gezielten, angepassten Managements. Um Ökologische Intensivierung voranzutreiben und ein Gleichgewicht zwischen Naturschutz- und Produktivitätszielen zu erreichen, bedarf es der Identifikation ökologischer Prozesse, die zur Steigerung von Biodiversität und Ökosystemdienstleistungen beitragen. Doch der die Wende zu einer nachhaltigeren Landwirtschaft wird nur langsam voran schreiten, wenn Forschungsergebnisse nicht global umgesetzt werden. Während der Öffentlichkeitsarbeit im EU Projekt Liberation konnte ich Informationen über die Vor- und Nachteile Ökologischer Intensivierung und deren Umsetzung sammeln. Hier stelle ich einen Leitfaden (‘TREE’) vor, der Wissenschaftlern helfen soll die Wirkung ihrer Forschung zu erhöhen. TREE verdeutlicht wie wichtig es ist, Stakeholder in den Planungs- und Forschungsprozess eines Projektes mit einzubeziehen, und aktiv die Verbreitung von Wissen und die Umsetzung wissenschaftlicher Ergebnisse voranzutreiben. TREE fordert Wissenschaftler dazu auf, die eigene Komfortzone zu verlassen und sozioökonomische, praktische und rechtliche Aspekte zu berücksichtigen, welche oft in der klassischen Forschung unbeachtet bleiben. Ökologische Intensivierung ist ein bedeutender Schritt in Richtung nachhaltige Landwirtschaft. In dieser Arbeit identifiziere ich neue Wege zur ökologischen Intensivierung. Bodenqualität, Störungsgrad des Bodens und die räumliche oder zeitliche Anbauvielfalt zeigten starke positive Korrelationen mit natürlichen Gegenspielern, biologischer Schädlingsbekämpfung und Erträgen auf, wodurch die Abhängigkeit von Agrochemikalien verringert wird. Unterschiede zwischen funktionellen Gruppen verursachten gegensätzliche Beziehungen zu Landschaftsvariablen auf verschiedenen räumlichen Skalen. Entgegen unserer Erwartungen nahmen Vögel in unserem System keinen Einfluss auf die biologische Schädlingsbekämpfung durch Insekten. Die Vogelvielfalt war außerdem unbeeinflusst von der regionalen Anbauvielfalt. Doch dominante funktionelle Vogelgruppen profitieren von der Vielfalt nicht agrarisch genutzter Landschaftsaspekte. Diese Ergebnisse betonen den Wert einer Mischung aus unterschiedlichen lokalen und landschaftsbezogenen Ansätzen zur Ökologischen Intensivierung. Gleichzeitig kann der Erfolg Ökologischer Intensivierung vor allem dadurch erhöht werden, dass Stakeholder in den Forschungsprozess eingebunden werden. Dies steigert die Qualität der Forschung und reduziert die Wahrscheinlichkeit, während der Umsetzung auf unüberwindbare Hürden zu stoßen. KW - Ökologische Intensivierung KW - Biologische Schädlingsbekämpfung KW - Landwirtschaft KW - Artensterben KW - Ökosystemdienstleistungen KW - Öffentlichkeitsarbeit KW - ecological intensification KW - biological pest control KW - agriculture KW - public outreach KW - ecosystem services KW - sustainable farming Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-171228 ER - TY - INPR A1 - Auerhammer, Dominic A1 - Arrowsmith, Merle A1 - Bissinger, Philipp A1 - Braunschweig, Holger A1 - Dellermann, Theresa A1 - Kupfer, Thomas A1 - Lenczyk, Carsten A1 - Roy, Dipak A1 - Schäfer, Marius A1 - Schneider, Christoph T1 - Increasing the Reactivity of Diborenes: Derivatization of NHC- Supported Dithienyldiborenes with Electron-Donor Groups T2 - Chemistry, A European Journal N2 - A series of NHC-supported 1,2-dithienyldiborenes was synthesized from the corresponding (dihalo)thienylborane NHC precursors. NMR and UV-vis spectroscopic data, as well as X-ray crystallographic analyses, were used to assess the electronic and steric influences on the B=B double bond of various NHCs and electron-donating substituents on the thienyl ligands. Crystallographic data showed that the degree of coplanarity of the diborene core and thienyl groups is highly dependent on the sterics of the substituents. Furthermore, any increase in the electron- donating ability of the substituents resulted in the destabilization of the HOMO and greater instability of the resulting diborenes. KW - diborenes KW - N-heterocyclic carbenes KW - electron donors KW - structural analysis KW - spectroscopy Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-155419 N1 - This is the pre-peer reviewed version of the following article: Auerhammer, D., Arrowsmith, M., Bissinger, P., Braunschweig, H., Dellermann, T., Kupfer, T., Lenczyk, C., Roy, D. K., Schäfer, M. and Schneider, C. (2017), Increasing the Reactivity of Diborenes: Derivatization of NHC-Supported Dithienyldiborenes with Electron-Donor Groups. Chem. Eur. J.. doi:10.1002/chem.201704669, which has been published in final form at doi:10.1002/chem.201704669. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-Archiving. ER - TY - JOUR A1 - Schilbach, Karin A1 - Alkhaled, Mohammed A1 - Welker, Christian A1 - Eckert, Franziska A1 - Blank, Gregor A1 - Ziegler, Hendrik A1 - Sterk, Marco A1 - Müller, Friederike A1 - Sonntag, Katja A1 - Wieder, Thomas A1 - Braumüller, Heidi A1 - Schmitt, Julia A1 - Eyrich, Matthias A1 - Schleicher, Sabine A1 - Seitz, Christian A1 - Erbacher, Annika A1 - Pichler, Bernd J. A1 - Müller, Hartmut A1 - Tighe, Robert A1 - Lim, Annick A1 - Gillies, Stephen D. A1 - Strittmatter, Wolfgang A1 - Röcken, Martin A1 - Handgretinger, Rupert T1 - Cancer-targeted IL-12 controls human rhabdomyosarcoma by senescence induction and myogenic differentiation JF - OncoImmunology N2 - Stimulating the immune system to attack cancer is a promising approach, even for the control of advanced cancers. Several cytokines that promote interferon-γ-dominated immune responses show antitumor activity, with interleukin 12 (IL-12) being of major importance. Here, we used an antibody-IL-12 fusion protein (NHS-IL12) that binds histones of necrotic cells to treat human sarcoma in humanized mice. Following sarcoma engraftment, NHS-IL12 therapy was combined with either engineered IL-7 (FcIL-7) or IL-2 (IL-2MAB602) for continuous cytokine bioavailability. NHS-IL12 strongly induced innate and adaptive antitumor immunity when combined with IL-7 or IL-2. NHS-IL12 therapy significantly improved survival of sarcoma-bearing mice and caused long-term remissions when combined with IL-2. NHS-IL12 induced pronounced cancer cell senescence, as documented by strong expression of senescence-associated p16\(^{INK4a}\) and nuclear translocation of p-HP1γ, and permanent arrest of cancer cell proliferation. In addition, this cancer immunotherapy initiated the induction of myogenic differentiation, further promoting the hypothesis that efficient antitumor immunity includes mechanisms different from cytotoxicity for efficient cancer control in vivo. KW - TH17 cells KW - cancer-targeted IL-12 KW - differentiation KW - humanized mice KW - immunocytokine KW - immunotherapy KW - M1/M2 macrophages KW - rhabdomyosarcoma KW - TH1-induced senescence KW - tumor-infiltrating lymphocytes Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154579 VL - 4 IS - 7 ER - TY - JOUR A1 - Gutknecht, Lise A1 - Popp, Sandy A1 - Waider, Jonas A1 - Sommerlandt, Frank M. J. A1 - Göppner, Corinna A1 - Post, Antonia A1 - Reif, Andreas A1 - van den Hove, Daniel A1 - Strekalova, Tatyana A1 - Schmitt, Angelika A1 - Colaςo, Maria B. N. A1 - Sommer, Claudia A1 - Palme, Rupert A1 - Lesch, Klaus-Peter T1 - Interaction of brain 5-HT synthesis deficiency, chronic stress and sex differentially impact emotional behavior in Tph2 knockout mice JF - Psychopharmacology N2 - Rationale While brain serotonin (5-HT) function is implicated in gene-by-environment interaction (GxE) impacting the vulnerability-resilience continuum in neuropsychiatric disorders, it remains elusive how the interplay of altered 5-HT synthesis and environmental stressors is linked to failure in emotion regulation. Objective Here, we investigated the effect of constitutively impaired 5-HT synthesis on behavioral and neuroendocrine responses to unpredictable chronic mild stress (CMS) using a mouse model of brain 5-HT deficiency resulting from targeted inactivation of the tryptophan hydroxylase-2 (Tph2) gene. Results Locomotor activity and anxiety- and depression-like behavior as well as conditioned fear responses were differentially affected by Tph2 genotype, sex, and CMS. Tph2 null mutants (Tph2\(^{−/−}\)) displayed increased general metabolism, marginally reduced anxiety- and depression-like behavior but strikingly increased conditioned fear responses. Behavioral modifications were associated with sex-specific hypothalamic-pituitary-adrenocortical (HPA) system alterations as indicated by plasma corticosterone and fecal corticosterone metabolite concentrations. Tph2\(^{−/−}\) males displayed increased impulsivity and high aggressiveness. Tph2\(^{−/−}\) females displayed greater emotional reactivity to aversive conditions as reflected by changes in behaviors at baseline including increased freezing and decreased locomotion in novel environments. However, both Tph2\(^{−/−}\) male and female mice were resilient to CMS-induced hyperlocomotion, while CMS intensified conditioned fear responses in a GxE-dependent manner. Conclusions Our results indicate that 5-HT mediates behavioral responses to environmental adversity by facilitating the encoding of stress effects leading to increased vulnerability for negative emotionality. KW - Serotonin KW - Tryptophan hydroxylase-2 (Tph2) KW - chronic stress KW - gene-by-environment interaction KW - anxiety KW - fear KW - depression KW - aggression Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154586 VL - 232 SP - 2429 EP - 2441 ER - TY - JOUR A1 - Kress, Michaela A1 - Hüttenhofer, Alexander A1 - Landry, Marc A1 - Kuner, Rohini A1 - Favereaux, Alexandre A1 - Greenberg, David A1 - Bednarik, Josef A1 - Heppenstall, Paul A1 - Kronenberg, Florian A1 - Malcangio, Marzia A1 - Rittner, Heike A1 - Üçeyler, Nurcan A1 - Trajanoski, Zlatko A1 - Mouritzen, Peter A1 - Birklein, Frank A1 - Sommer, Claudia A1 - Soreq, Hermona T1 - microRNAs in nociceptive circuits as predictors of future clinical applications JF - Frontiers in Molecular Neuroscience N2 - Neuro-immune alterations in the peripheral and central nervous system play a role in the pathophysiology of chronic pain, and non-coding RNAs – and microRNAs (miRNAs) in particular – regulate both immune and neuronal processes. Specifically, miRNAs control macromolecular complexes in neurons, glia and immune cells and regulate signals used for neuro-immune communication in the pain pathway. Therefore, miRNAs may be hypothesized as critically important master switches modulating chronic pain. In particular, understanding the concerted function of miRNA in the regulation of nociception and endogenous analgesia and defining the importance of miRNAs in the circuitries and cognitive, emotional and behavioral components involved in pain is expected to shed new light on the enigmatic pathophysiology of neuropathic pain, migraine and complex regional pain syndrome. Specific miRNAs may evolve as new druggable molecular targets for pain prevention and relief. Furthermore, predisposing miRNA expression patterns and inter-individual variations and polymorphisms in miRNAs and/or their binding sites may serve as biomarkers for pain and help to predict individual risks for certain types of pain and responsiveness to analgesic drugs. miRNA-based diagnostics are expected to develop into hands-on tools that allow better patient stratification, improved mechanism-based treatment, and targeted prevention strategies for high risk individuals. KW - chronic pain KW - biomarker KW - polymorphism KW - miRNA-based diagnostics KW - miRNA expression patterns KW - miRNA polymorphisms KW - antagomir KW - miRNA-based analgesic Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154597 VL - 6 IS - 33 ER - TY - JOUR A1 - Majounie, Elisa A1 - Renton, Alan E. A1 - Mok, Kin A1 - Dopper, Elise G. P. A1 - Waite, Adrian A1 - Rollinson, Sara A1 - Chiò, Adriano A1 - Restagno, Gabriella A1 - Nicolaou, Nayia A1 - Simon-Sanchez, Javier A1 - van Swieten, John C. A1 - Abramzon, Yevgeniya A1 - Johnson, Janel O. A1 - Sendtner, Michael A1 - Pamphlett, Roger A1 - Orrell, Richard W. A1 - Mead, Simon A1 - Sidle, Katie C. A1 - Houlden, Henry A1 - Rohrer, Jonathan D. A1 - Morrison, Karen E. A1 - Pall, Hardev A1 - Talbot, Kevin A1 - Ansorge, Olaf A1 - Hernandez, Dena G. A1 - Arepalli, Sampath A1 - Sabatelli, Mario A1 - Mora, Gabriele A1 - Corbo, Massimo A1 - Giannini, Fabio A1 - Calvo, Andrea A1 - Englund, Elisabet A1 - Borghero, Giuseppe A1 - Floris, Gian Luca A1 - Remes, Anne M. A1 - Laaksovirta, Hannu A1 - McCluskey, Leo A1 - Trojanowski, John Q. A1 - Van Deerlin, Vivianna M. A1 - Schellenberg, Gerard D. A1 - Nalls, Michael A. A1 - Drory, Vivian E. A1 - Lu, Chin-Song A1 - Yeh, Tu-Hsueh A1 - Ishiura, Hiroyuki A1 - Takahashi, Yuji A1 - Tsuji, Shoji A1 - Le Ber, Isabelle A1 - Brice, Alexis A1 - Drepper, Carsten A1 - Williams, Nigel A1 - Kirby, Janine A1 - Shaw, Pamela A1 - Hardy, John A1 - Tienari, Pentti J. A1 - Heutink, Peter A1 - Morris, Huw R. A1 - Pickering-Brown, Stuart A1 - Traynor, Bryan J. T1 - Frequency of the C9orf72 hexanucleotide repeat expansion in patients with amyotrophic lateral sclerosis and frontotemporal dementia: a cross-sectional study JF - The Lancet Neurology N2 - Background We aimed to accurately estimate the frequency of a hexanucleotide repeat expansion in C9orf72 that has been associated with a large proportion of cases of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). Methods We screened 4448 patients diagnosed with ALS (El Escorial criteria) and 1425 patients with FTD (Lund-Manchester criteria) from 17 regions worldwide for the GGGGCC hexanucleotide expansion using a repeat-primed PCR assay. We assessed familial disease status on the basis of self-reported family history of similar neurodegenerative diseases at the time of sample collection. We compared haplotype data for 262 patients carrying the expansion with the known Finnish founder risk haplotype across the chromosomal locus. We calculated age-related penetrance using the Kaplan-Meier method with data for 603 individuals with the expansion. Findings In patients with sporadic ALS, we identified the repeat expansion in 236 (7·0%) of 3377 white individuals from the USA, Europe, and Australia, two (4·1%) of 49 black individuals from the USA, and six (8·3%) of 72 Hispanic individuals from the USA. The mutation was present in 217 (39·3%) of 552 white individuals with familial ALS from Europe and the USA. 59 (6·0%) of 981 white Europeans with sporadic FTD had the mutation, as did 99 (24·8%) of 400 white Europeans with familial FTD. Data for other ethnic groups were sparse, but we identified one Asian patient with familial ALS (from 20 assessed) and two with familial FTD (from three assessed) who carried the mutation. The mutation was not carried by the three Native Americans or 360 patients from Asia or the Pacific Islands with sporadic ALS who were tested, or by 41 Asian patients with sporadic FTD. All patients with the repeat expansion had (partly or fully) the founder haplotype, suggesting a one-off expansion occurring about 1500 years ago. The pathogenic expansion was non-penetrant in individuals younger than 35 years, 50% penetrant by 58 years, and almost fully penetrant by 80 years. Interpretation A common Mendelian genetic lesion in C9orf72 is implicated in many cases of sporadic and familial ALS and FTD. Testing for this pathogenic expansion should be considered in the management and genetic counselling of patients with these fatal neurodegenerative diseases. KW - DNA repeat expansion KW - C9orf72 KW - amyotrophic lateral sclerosis KW - frontotemporal dementia KW - cross-sectional studies Y1 - 2012 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154644 VL - 11 SP - 323 EP - 330 ER - TY - JOUR A1 - Thangaraj Selvaraj, Bhuvaneish A1 - Frank, Nicolas A1 - Bender, Florian L. P. A1 - Asan, Esther A1 - Sendtner, Michael T1 - Local axonal function of STAT3 rescues axon degeneration in the pmn model of motoneuron disease JF - The Journal of Cell Biology N2 - Axonal maintenance, plasticity, and regeneration are influenced by signals from neighboring cells, in particular Schwann cells of the peripheral nervous system. Schwann cells produce neurotrophic factors, but the mechanisms by which ciliary neurotrophic factor (CNTF) and other neurotrophic molecules modify the axonal cytoskeleton are not well understood. In this paper, we show that activated signal transducer and activator of transcription-3 (STAT3), an intracellular mediator of the effects of CNTF and other neurotrophic cytokines, acts locally in axons of motoneurons to modify the tubulin cytoskeleton. Specifically, we show that activated STAT3 interacted with stathmin and inhibited its microtubule-destabilizing activity. Thus, ectopic CNTF-mediated activation of STAT3 restored axon elongation and maintenance in motoneurons from progressive motor neuronopathy mutant mice, a mouse model of motoneuron disease. This mechanism could also be relevant for other neurodegenerative diseases and provide a target for new therapies for axonal degeneration. KW - Schwann cells KW - transcription-3 (STAT3) KW - ciliary neurotrophic factor (CNTF) KW - axonal degeneration Y1 - 2012 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154675 VL - 199 IS - 3 SP - 437 EP - 451 ER - TY - JOUR A1 - Arlt, Wiebke A1 - Biehl, Michael A1 - Taylor, Angela E. A1 - Hahner, Stefanie A1 - Libé, Rossella A1 - Hughes, Beverly A. A1 - Schneider, Petra A1 - Smith, David J. A1 - Stiekema, Han A1 - Krone, Nils A1 - Porfiri, Emilio A1 - Opocher, Giuseppe A1 - Bertherat, Jerôme A1 - Mantero, Franco A1 - Allolio, Bruno A1 - Terzolo, Massimo A1 - Nightingale, Peter A1 - Shackleton, Cedric H. L. A1 - Bertagna, Xavier A1 - Fassnacht, Martin A1 - Stewart, Paul M. T1 - Urine Steroid Metabolomics as a Biomarker Tool for Detecting Malignancy in Adrenal Tumors JF - The Journal of Clinical Endocrinology & Metabolism N2 - Context: Adrenal tumors have a prevalence of around 2% in the general population. Adrenocortical carcinoma (ACC) is rare but accounts for 2–11% of incidentally discovered adrenal masses. Differentiating ACC from adrenocortical adenoma (ACA) represents a diagnostic challenge in patients with adrenal incidentalomas, with tumor size, imaging, and even histology all providing unsatisfactory predictive values. Objective: Here we developed a novel steroid metabolomic approach, mass spectrometry-based steroid profiling followed by machine learning analysis, and examined its diagnostic value for the detection of adrenal malignancy. Design: Quantification of 32 distinct adrenal derived steroids was carried out by gas chromatography/mass spectrometry in 24-h urine samples from 102 ACA patients (age range 19–84 yr) and 45 ACC patients (20–80 yr). Underlying diagnosis was ascertained by histology and metastasis in ACC and by clinical follow-up [median duration 52 (range 26–201) months] without evidence of metastasis in ACA. Steroid excretion data were subjected to generalized matrix learning vector quantization (GMLVQ) to identify the most discriminative steroids. Results: Steroid profiling revealed a pattern of predominantly immature, early-stage steroidogenesis in ACC. GMLVQ analysis identified a subset of nine steroids that performed best in differentiating ACA from ACC. Receiver-operating characteristics analysis of GMLVQ results demonstrated sensitivity = specificity = 90% (area under the curve = 0.97) employing all 32 steroids and sensitivity = specificity = 88% (area under the curve = 0.96) when using only the nine most differentiating markers. Conclusions: Urine steroid metabolomics is a novel, highly sensitive, and specific biomarker tool for discriminating benign from malignant adrenal tumors, with obvious promise for the diagnostic work-up of patients with adrenal incidentalomas. KW - adrenal cortex hormones KW - urine KW - adrenal cortex neoplasms KW - mass spectrometry KW - metabolomics Y1 - 2011 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154682 VL - 96 IS - 12 SP - 3775 EP - 3784 ER - TY - JOUR A1 - Hegerl, Ulrich A1 - Wittenburg, Lisa A1 - Arensman, Ella A1 - Van Audenhove, Chantal A1 - Coyne, James C. A1 - McDaid, David A1 - van der Feltz-Cornelis, Christina M. A1 - Gusmão, Ricardo A1 - Kopp, Mária A1 - Maxwell, Margaret A1 - Meise, Ullrich A1 - Roskar, Saska A1 - Sarchiapone, Marco A1 - Schmidtke, Armin A1 - Värnik, Airi A1 - Bramesfeld, Anke T1 - Optimizing Suicide Prevention Programs and Their Implementation in Europe (OSPI Europe): an evidence-based multi-level approach JF - BMC Public Health N2 - Background Suicide and non-fatal suicidal behaviour are significant public health issues in Europe requiring effective preventive interventions. However, the evidence for effective preventive strategies is scarce. The protocol of a European research project to develop an optimized evidence based program for suicide prevention is presented. Method The groundwork for this research has been established by a regional community based intervention for suicide prevention that focuses on improving awareness and care for depression performed within the European Alliance Against Depression (EAAD). The EAAD intervention consists of (1) training sessions and practice support for primary care physicians,(2) public relations activities and mass media campaigns, (3) training sessions for community facilitators who serve as gatekeepers for depressed and suicidal persons in the community and treatment and (4) outreach and support for high risk and self-help groups (e.g. helplines). The intervention has been shown to be effective in reducing suicidal behaviour in an earlier study, the Nuremberg Alliance Against Depression. In the context of the current research project described in this paper (OSPI-Europe) the EAAD model is enhanced by other evidence based interventions and implemented simultaneously and in standardised way in four regions in Ireland, Portugal, Hungary and Germany. The enhanced intervention will be evaluated using a prospective controlled design with the primary outcomes being composite suicidal acts (fatal and non-fatal), and with intermediate outcomes being the effect of training programs, changes in public attitudes, guideline-consistent media reporting. In addition an analysis of the economic costs and consequences will be undertaken, while a process evaluation will monitor implementation of the interventions within the different regions with varying organisational and healthcare contexts. Discussion This multi-centre research seeks to overcome major challenges of field research in suicide prevention. It pools data from four European regions, considerably increasing the study sample, which will be close to one million. In addition, the study will gather important information concerning the potential to transfer this multilevel program to other health care systems. The results of this research will provide a basis for developing an evidence-based, efficient concept for suicide prevention for EU-member states. KW - suicide prevention KW - preventive strategies KW - Europe Y1 - 2009 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-154695 VL - 9 IS - 428 ER -