TY  - INPR
A1  - Wohlgemuth, Matthias
A1  - Mitric, Roland
T1  - Excitation energy transport in DNA modelled by multi-chromophoric field-induced surface hopping
T2  - Physical Chemistry Chemical Physics
N2  - Absorption of ultraviolet light is known as a major source of carcinogenic mutations of DNA. The underlying processes of excitation energy dissipation are yet not fully understood. In this work we provide a new and generally applicable route for studying the excitation energy transport in multi-chromophoric complexes at an atomistic level. The surface-hopping approach in the frame of the extended Frenkel exciton model combined with QM/MM techniques allowed us to simulate the photodynamics of the alternating (dAdT)10 : (dAdT)10 double-stranded DNA. In accordance with recent experiments, we find that the excited state decay is multiexponential, involving a long and a short component which are due to two distinct mechanisms: formation of long-lived delocalized excitonic and charge transfer states vs. ultrafast decaying localized states resembling those of the bare nucleobases. Our simulations explain all stages of the ultrafast photodynamics including initial photoexcitation, dynamical evolution out of the Franck-Condon region, excimer formation and nonradiative relaxation to the ground state.
KW  - Photodynamics
KW  - DNA
Y1  - 2020
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-209467
ET  - submitted version
ER  - 
TY  - INPR
A1  - Dietzsch, Julia
A1  - Jayachandran, Ajay
A1  - Mueller, Stefan
A1  - Höbartner, Claudia
A1  - Brixner, Tobias
T1  - Excitonic coupling of RNA-templated merocyanine dimer studied by higher-order transient absorption spectroscopy
T2  - Chemical Communications
N2  - We report the synthesis and spectroscopic analysis of RNA containing the barbituric acid merocyanine rBAM2 as a nucleobase surrogate. Incorporation into RNA strands by solid-phase synthesis leads to fluorescence enhancement compared to the free chromophore. In addition, linear absorption studies show the formation of an excitonically coupled H-type dimer in the hybridized duplex. Ultrafast third- and fifth-order transient absorption spectroscopy of this non-fluorescent dimer suggests immediate (sub-200 fs) exciton transfer and annihilation due to the proximity of the rBAM2 units.
KW  - Barbituric Acid Merocyanines
KW  - Nucleobase Surrogate Incorporation
KW  - Higher-order Transient Absorption Spectroscopy
KW  - rBAM2-labeled RNA strands
Y1  - 2023
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:20-opus-327772
ET  - submitted version
ER  -