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Schriftenreihe
Sonstige beteiligte Institutionen
- DFG Forschungsgruppe 2757 / Lokale Selbstregelungen im Kontext schwacher Staatlichkeit in Antike und Moderne (LoSAM) (2)
- Klinikum Fulda (2)
- Ökologische Station Fabrikschleichach (2)
- Airbus Defence and Space GmbH (1)
- Akademie der Wissenschaften und der Literatur, Mainz (1)
- Apotheke, Universitätsklinikum Würzburg (1)
- Biomedical Center Munich, Department of Physiological Chemistry, Ludwig-Maximilians-Universität München (1)
- Bundeswehr Institute of Radiobiology affiliated to the University of Ulm, Munich, Germany (1)
- Clinical Trial Center (CTC) / Zentrale für Klinische Studien Würzburg (ZKSW) (1)
- Cologne Game Lab (1)
One of the main problems we face with PPGL is the lack of molecular markers capable of predicting the development of metastases in patients. Telomere-related genes, such as TERT and ATRX, have been recently described in PPGL, supporting the association between the activation of immortalization mechanisms and disease progression. However, the contribution of other genes involving telomere preservation machinery has not been previously investigated. In this work, we aimed to analyze the prognostic value of a comprehensive set of genes involved in telomere maintenance. For this study, we collected 165 PPGL samples (97 non-metastatic/63 metastatic), genetically characterized, in which the expression of 29 genes of interest was studied by NGS. Three of the 29 genes studied, TERT, ATRX and NOP10, showed differential expression between metastatic and non-metastatic cases, and alterations in these genes were associated with a shorter time to progression, independent of SDHB-status. We studied telomere length by Q-FISH in patient samples and in an in vitro model. NOP10 overexpressing tumors displayed an intermediate-length telomere phenotype without ALT, and in vitro results suggest that NOP10 has a role in telomerase-dependent telomere maintenance. We also propose the implementation of NOP10 IHC to better stratify PPGL patients.
Morbus Fabry betrifft als lysosomale Speicherkrankheit viele Organsysteme durch die Ablagerung von Gb3 in verschiedenen Geweben. Besonders durch die Beteiligung von Nieren und Herz, wird die Lebenszeit von den Patienten häufig verkürzt. Eine Beschreibung konkreter klinischer Symptome, welche auch durch Allgemeinmediziner oder Zahnärzte erkannt werden könnten, könnte eine frühzeitigere Diagnose und damit frühzeitige Therapie ermöglichen. Besonders extraorale gesichtsspezifische Merkmale können von verschiedensten Gruppen von Ärzten erkannt werden.
Die extraorale Auswertung zeigte, wie in der Literatur beschrieben, das Vorkommen von periorbitaler Fülle, prominente Arcus superciliaris, eine kürzere und bullösere Nase. Die Auffälligkeiten waren besonders bei den Männern zu beobachten.
Die intraorale Auswertung wurde in dentale Auffälligkeiten und Ereignisse des Hart- und Weichgewebes eingeteilt. Bei den dentalen Ereignissen zeigte sich eine Diskrepanz zwischen der Kiefergröße und dem Zahnmaterial. So neigte das Patientenkollektiv eher zu einem Breitkiefer, was eine Erklärung für die multiplen Lücken im Frontzahnbereich der Patienten darstellt. An der Mundschleimhaut und perioral konnten vermehrt Angiokeratome und Teleangiektasien festgestellt werden, sowie das vermehrte Vorkommen von Exostosen. Speziell die Zunge der Patienten zeigte auch Auffälligkeiten in Form von einer subjektiven Makroglossie, einer Furchenzunge und Veränderungen der Papillen.
Die Auffälligkeiten in der Mundhöhle und im Kopf-Hals Bereich der Morbus Fabry Patienten sind, wie der Literatur beschrieben, vorhanden, jedoch stellen sie keine Schlüsselrolle in der Diagnose dar, da sie in allen Bereichen nur leichte Abweichungen oder Auffälligkeiten zeigen, welche nicht immer Auftreten und daher schwer zu diagnostizieren sind.
The main goal of this thesis is to elucidate the sense in which recent experimental progress in condensed matter physics, namely the verification of two-dimensional Dirac-like materials and their control in ballistic- as well as hydrodynamic transport experiments enables the observation of a well-known 'high-energy' phenomenon: The parity anomaly of planar quantum electrodynamics (QED\(_{2+1}\)). In a nutshell, the low-energy physics of two-dimensional Quantum Anomalous Hall (QAH) insulators like (Hg,Mn)Te quantum wells or magnetically doped (Bi,Sb)Te thin films can be described by the combined response of two 2+1 space-time dimensional Chern insulators with a linear dispersion in momentum. Due to their Dirac-like spectra, each of those Chern insulators is directly related to the parity anomaly of planar quantum electrodynamics. However, in contrast to a pure QED\(_{2+1}\) system, the Lagrangian of each Chern insulator is described by two different mass terms: A conventional momentum-independent Dirac mass \(m\), as well as a momentum-dependent so-called Newtonian mass term \(B \vert \mathbf{k} \vert^2\). According to the parity anomaly it is not possible to well-define a parity- and U(1) gauge invariant quantum system in 2+1 space-time dimensions. More precisely, starting with a parity symmetric theory at the classical level, insisting on gauge-invariance at the quantum level necessarily induces parity-odd terms in the calculation of the quantum effective action. The role of the Dirac mass term in the calculation of the effective QED\(_{2+1}\) action has been initially studied in Phys. Rev. Lett. 51, 2077 (1983). Even in the presence of a Dirac mass, the associated fermion determinant diverges and lacks gauge invariance. This requires a proper regularization/renormalizaiton scheme and, as such, transfers the peculiarities of the parity anomaly to the massive case.
In the scope of this thesis, we connect the momentum-dependent Newtonian mass term of a Chern insulator to the parity anomaly. In particular, we reveal, that in the calculation of the effective action, before renormalization, the Newtonian mass term acts similarly to a parity-breaking element of a high-energy regularization scheme. This calculation allows us to derive the finite frequency correction to the DC Hall conductivity of a QAH insulator. We derive that the leading order AC correction contains a term proportional to the Chern number. This term originates from the Newtonian mass and can be measured via electrical or via magneto-optical experiments. The Newtonian mass, in particular, significantly changes the resonance structure of the AC Hall conductivity in comparison to pure Dirac systems like graphene.
In addition, we study the effective action of the aforementioned Chern insulators in external out-of-plane magnetic fields. We show that as a consequence of the parity anomaly the QAH phase in (Hg,Mn)Te quantum wells or in magnetically doped (Bi,Sb)Te thin films survives in out-of-plane magnetic fields, violates the Onsager relation, and can therefore be distinguished from a conventional quantum Hall (QH) response. As a smoking-gun of the QAH phase in increasing magnetic fields, we predict a transition from a quantized Hall plateau with \(\sigma_\mathrm{xy}= -\mathrm{e}^2/\mathrm{h}\) to a not perfectly quantized plateau which is caused by scattering processes between counter-propagating QH and QAH edge states. This transition is expected to be of significant relevance in paramagnetic QAH insulators like (Hg,Mn)Te/CdTe quantum wells, in which the exchange interaction competes against the out-of-plane magnetic field.
All of the aforementioned results do not incorporate finite temperature effects. In order to shed light on such phenomena, we further analyze the finite temperature Hall response of 2+1 dimensional Chern insulators under the combined influence of a chemical potential and an out-of-plane magnetic field. As we have mentioned above, this non-dissipative transport coefficient is directly related to the parity anomaly of planar quantum electrodynamics. Within the scope of our analysis we show that the parity anomaly itself is not renormalized by finite temperature effects. However, the parity anomaly induces two terms of different physical origin in the effective Chern-Simons action of a QAH insulator, which are directly proportional to its Hall conductivity. The first term is temperature and chemical potential independent and solely encodes the intrinsic topological response. The second term specifies the non-topological thermal response of conduction- and valence band modes, respectively. We show that the relativistic mass \(m\) of a Chern insulator counteracts finite temperature effects, whereas its non-relativistic Newtonian mass \(B \vert \mathbf{k} \vert^2 \) enhances these corrections. In addition, we are extending our associated analysis to finite out-of-plane magnetic fields, and relate the thermal response of a Chern insulator therein to the spectral asymmetry, which is a measure of the parity anomaly in out-of-plane magnetic fields.
In the second part of this thesis, we study the hydrodynamic properties of two-dimensional electron systems with a broken time-reversal and parity symmetry. Within this analysis we are mainly focusing on the non-dissipative transport features originating from a peculiar hydrodynamic transport coefficient: The Hall viscosity \(\eta_\mathrm{H}\). In out-of-plane magnetic fields, the Hall viscous force directly competes with the Lorentz force, as both mechanisms contribute to the overall Hall voltage. In our theoretical considerations, we present a way of uniquely distinguishing these two contributions in a two-dimensional channel geometry by calculating their functional dependencies on all external parameters. We are in particular deriving that the ratio of the Hall viscous contribution to the Lorentz force contribution is negative and that its absolute value decreases with an increasing width, slip-length and carrier density. Instead, it increases with the electron-electron mean free path in the channel geometry considered. We show that in typical materials such as GaAs the Hall viscous contribution can dominate the Lorentz signal up to a few tens of millitesla until the total Hall voltage vanishes and eventually is exceeded by the Lorentz contribution. Last but not least, we derive that the total Hall electric field has a parabolic form originating from Lorentz effects. Most remarkably, the offset of this parabola is directly characterized by the Hall viscosity. Therefore, in summary, our results pave the way to measure and to identify the Hall viscosity via both global and local measurements of the entire Hall voltage.
In Staphylococcus aureus, de novo methionine biosynthesis is regulated by a unique hierarchical pathway involving stringent-response controlled CodY repression in combination with a T-box riboswitch and RNA decay. The T-box riboswitch residing in the 5′ untranslated region (met leader RNA) of the S. aureus metICFE-mdh operon controls downstream gene transcription upon interaction with uncharged methionyl-tRNA. met leader and metICFE-mdh (m)RNAs undergo RNase-mediated degradation in a process whose molecular details are poorly understood. Here we determined the secondary structure of the met leader RNA and found the element to harbor, beyond other conserved T-box riboswitch structural features, a terminator helix which is target for RNase III endoribonucleolytic cleavage. As the terminator is a thermodynamically highly stable structure, it also forms posttranscriptionally in met leader/ metICFE-mdh read-through transcripts. Cleavage by RNase III releases the met leader from metICFE-mdh mRNA and initiates RNase J-mediated degradation of the mRNA from the 5′-end. Of note, metICFE-mdh mRNA stability varies over the length of the transcript with a longer lifespan towards the 3′-end. The obtained data suggest that coordinated RNA decay represents another checkpoint in a complex regulatory network that adjusts costly methionine biosynthesis to current metabolic requirements.
Die wahrscheinlich größten Probleme des 21. Jahrhunderts sind der Klimawandel und die Sicherstellung der Nahrungsmittelversorgung für eine steigende Zahl an Menschen. Durch die Zunahme von extremen Wetterbedingungen wie Trockenheit und Hitze wird der Anbau konventioneller, wenig toleranter Nutzpflanzen erschwert und die dadurch notwendige, steigende Bewässerung der Flächen führt darüber hinaus zu einer zusätzlichen Versalzung der Böden mit für Pflanzen toxischen Natrium- und Chlorid-Ionen. Kenntnisse über Anpassungsstrategien salztoleranter Pflanzen an Salzstress, aber auch detailliertes Wissen über die Steuerung der Transpiration und damit des Wasserverlusts von Pflanzen sind daher wichtig, um auch künftig ertragreiche Landwirtschaft betreiben zu können. In dieser Arbeit habe ich verschiedene Aspekte der pflanzlichen Stressphysiologie bearbeitet, die im Folgenden getrennt voneinander zusammengefasst werden.
I. Funktionelle Unterschiede der PYR/PYL-Rezeptoren von Schließzellen
Entscheidend für den Wasserstatus von Pflanzen ist die Kontrolle des Wasserverlusts durch Spaltöffnungen (Stomata), die von einem Paar Schließzellen gebildet werden. Externe Faktoren wie Licht, Luftfeuchtigkeit und CO2, sowie interne Faktoren wie das Phytohormon Abszisinsäure (ABA) regulieren über Signalkaskaden die Stomaweite und dadurch den Wasserverlust. Die zugrunde liegenden Signalkaskaden überlappen teilweise. Vor allem der Stomaschluss durch erhöhtes CO2 und ABA weisen viele Gemeinsamkeiten auf und die Identifizierung des Konvergenzpunktes beider Signale ist immer noch aktueller Gegenstand der Forschung. Von besonderem Interesse sind dabei die in Schließzellen exprimierten ABA-Rezeptoren der PYR/PYL-Familie. Denn obwohl bislang nicht nachgewiesen werden konnte, dass CO2 zu einem Anstieg des ABA-Gehalts von Schließzellen führt deuten einige Studien darauf hin, dass die ABA-Rezeptoren selbst am CO2-Signalweg beteiligt sind.
Durch Untersuchungen der Stomareaktion von Arabidopsis ABA-Rezeptormutanten konnte ich in dieser Arbeit zeigen, dass die in Schließzellen exprimierten ABA-Rezeptoren der PYR/PYL-Familie funktionale Unterschiede aufweisen. Fünffach-Verlustmutanten der ABA-Rezeptoren PYR1, PYL2, 4, 5 und 8 (12458) waren in ihrem ABA-induzierten Stomaschluss beeinträchtigt und nur die Komplementation mit PYL2 und in geringerem Maße PYR1 konnte die ABA-Sensitivität wiederherstellen. Die Stomata von 12458-Verlustmutanten waren außerdem insensitiv gegenüber erhöhtem CO2, was auf eine Beteiligung der ABA-Rezeptoren am CO2-induzierten Stomaschluss hindeutet und diese Sensitivität konnte nur durch die Komplementation mit PYL4 oder PYL5, nicht aber mit PYL2 wiederhergestellt werden. Somit konnten in dieser Arbeit erstmals funktionelle Unterschiede der PYR/PYLs beim Stoma-Schluss nachgewiesen werden.
Alle externen und internen Stomaschluss-Signale haben außerdem Einfluss auf die Genexpression der Schließzellen und führen zu individuellen expressionellen Adaptionen. In vorangegangenen Microarray Studien konnte gezeigt werden, dass jeder Stimulus auch die Expression eines distinkten Sets an ABA-Rezeptoren beeinflusst. Im Rahmen dieser Arbeit konnte ich außerdem zeigen, dass die Expression der ABA-Rezeptoren bereits auf kleine Änderungen der ABA-Konzentration der Schließzellen reagiert und dass diese sich außerdem in ihrer Sensitivität gegenüber ABA unterschieden. Geringe Änderungen der ABA-Konzentration von Schließzellen haben demnach Auswirkungen auf deren Rezeptor-zusammensetzung. Darüber hinaus konnte ich zeigen, dass die Rezeptoren die Expression unterschiedlicher nachgeschalteter Gene beeinflussen, was darauf hindeutet, dass Anpassungen des Rezeptorpools durch geringe Änderungen des ABA-Gehalts von Schließzellen schlussendlich auf genexpressioneller Ebene zur längerfristigen Adaption an externe Bedingungen führen und die Rezeptoren auch hier funktional verschieden sind.
II. Stomatäre Besonderheiten der toleranten Dattelpalme (Phoenix dactylifera)
Dattelpalmen kommen natürlicherweise an besonders trockenen und heißen Standorten vor, an denen es aufgrund der harschen Bedingungen nur sehr wenigen Pflanzen möglich ist überhaupt zu wachsen. Ein naheliegender Grund für die herausragende Toleranz dieser Art gegenüber wasserlimitierenden Bedingungen ist eine Anpassung der stomatären Regulation zu Gunsten des Wasserhaushalts.
In dieser Arbeit konnte ich durch vergleichende Untersuchungen der lichtabhängigen Transpiration sowie dem ABA-induzierten Stomaschluss grundlegende Unterschiede in der Stomaphysiologie der Dattelpalmen und der eher sensitiven Modellpflanze Arabidopsis thaliana nachweisen. Blattgaswechselmessungen zeigten, dass Dattelpalmen in der Lage sind die Spaltöffnungen bei niedrigen Lichtintensitäten, bei denen Arabidopsis bereits deutlich geöffnete Stomata aufwies, geschlossen zu halten. Der bedeutendste Unterschied in der Stomaphysiologie von Dattelpalmen und Arabidopsis lag aber im ABA-induzierten Stomaschluss. Während über die Petiole verabreichtes ABA bei Arabidopsis innerhalb von 15 Minuten zu einem vollständigen Stomaschluss führte, konnte ich in dieser Arbeit zeigen, dass der ABA-induzierte Stomaschluss der Datteln nitratabhängig ist. ABA allein führte nur zu einem sehr langsamen Stomaschluss der innerhalb einer Stunde nicht vollständig abgeschlossen war. Nur in Gegenwart von Nitrat führte die ABA-Gabe in den Transpirationsstrom der Fiederblätter der Datteln zu einem schnellen und vollständigen Stomaschluss. In Arabidopsis wird der in Schließzellen vorkommende Anionenkanal AtSLAC1 durch eine über den ABA-Signalweg vermittelte Phosphorylierung aktiviert, was schlussendlich zur Aktivierung spannungsabhängiger Kationenkanäle und zum Ausstrom von Kalium aus den Schließzellen führt. Es konnte gezeigt werden, dass die Nitratabhängigkeit der ABA-Antwort der Schließzellen von Dattelpalmen auf Eigenschaften von PdSLAC1 zurückzuführen ist und dieser Kanal nur in Anwesenheit von extrazellulärem Nitrat aktivierbar ist. Mittlerweile konnte, unter anderem basierend auf diesen Ergebnissen, eine Tandem-Aminosäuresequenz identifiziert werden, die die SLAC-Homologe monokotyler Pflanzen wie der Dattelpalme von der dikotyler Pflanzen unterscheidet und zumindest teilweise für die nitratabhängige Aktivierung des Stomaschlusses vieler monokotyler verantwortlich ist.
III. Die Salztoleranz von Phoenix dactylifera und Chenopodium quinoa
Sowohl Dattelpalmen als auch C. quinoa weisen, verglichen mit den meisten anderen Pflanzen, eine hohe Toleranz gegenüber NaCl-haltigen Böden auf. In dieser Arbeit habe ich die Salztoleranz beider Arten untersucht, um so Strategien zu identifizieren, die diesen Pflanzen diese gesteigerte Toleranz ermöglichen.
Dattelpalmen können natürlicherweise auf salzigen Böden wachsen. Makroskopisch weisen diese Pflanzen aber keine Anpassungen wie bspw. Salzdrüsen auf und bislang ist unklar wie Dattelpalmen mit dem NaCl aus dem Boden umgehen. In dieser Arbeit konnte ich zeigen, dass der Natriumgehalt der Fiederblätter der Datteln durch eine sechswöchige Bewässerung mit 600mM NaCl, was ungefähr der Konzentration von Meerwasser entspricht, nicht zunimmt. Demnach sind Datteln so genannte „Exkluder“, also Pflanzen, die eine übermäßige Natriumaufnahme in photosynthetisch aktives Gewebe vermeiden. Der Natriumgehalt der Wurzeln dagegen nahm unter Salzstress aber zu. Diese Zunahme war allerdings in unterschiedlichen Bereichen der Wurzeln verschieden stark. Flammenphotometrische Messungen ergaben einen vom Wurzelansatz ausgehenden graduellen Anstieg des Natriumgehalts, der an der Wurzelspitze am höchsten war. Darüber hinaus konnte eine Induktion von PdSOS1, einem putativen Na+/H+-Antiporter in diesen unteren, natriumhaltigen Bereichen nachgewiesen werden. Eine hohe SOS1-Aktivität gilt bereits in anderen toleranten Arten als Schlüsselmerkmal für deren Toleranz und die gesteigerte Expression von PdSOS1 deutet auf eine erhöhte Natrium-Exportrate aus der Wurzel zurück in den Boden in diesen unteren Bereichen hin, was schlussendlich den Ausschluss von Natrium vermitteln könnte.
In sensitiven Arten führt Salzstress häufig zu einer Abnahme der Kaliumkonzentration des Gewebes. Interessanterweise war dies weder für das Blatt- noch das Wurzelgewebe der Dattelpalmen der Fall. Der Kaliumgehalt beider Gewebe blieb trotz der Bewässerung der Pflanzen mit Salzwasser konstant. Auf expressioneller Ebene konnte ich darüber hinaus zeigen, dass PdHAK5, ein putativer hochaffiner Kaliumtransporter, der unter Kontrollbedingungen überwiegend in den oberen Wurzelabschnitten exprimiert wurde, durch den Salzstress dort reprimiert wurde. PdKT, ebenfalls ein putatives Kalium-Transportprotein dagegen, wurde nicht durch die Salzbehandlung beeinflusst, was zusammengenommen darauf hindeutet, dass das Aufrechterhalten des Kaliumgehalts bei Salzstress durch die differentielle Regulation verschiedener Kaliumaufnahmesysteme gewährleistet wird. Der effiziente Ausschluss von Natrium zusammen mit dem hohen K+/Na+-Verhältnis könnten demnach Schlüsselmerkmale für die hohe Salztoleranz von Phoenix dactylifera darstellen.
Quinoa ist, ähnlich wie die Dattelpalme, eine salztolerante Nutzpflanze. Im Gegensatz zu Dattelpalmen weist Quinoa allerdings besondere Strukturen auf der Epidermis auf, die so genannten epidermalen Blasenhaare (englisch: epidermal bladder cells, EBCs). Die Funktion dieser ballonartig vergrößerten Zellen als externe Salzspeicher wird seit längerem diskutiert.
Flammenphotometrische Messungen des Natriumgehalts von Quinoa unter Salzstressbedingungen ergaben, dass Quinoa anders als Dattelpalmen, Natrium in die oberirdischen, photosynthetisch aktiven Organe aufnimmt. Auch die Zunahme des Natriumgehalts der EBCs konnte ich nachweisen. Junge Blätter haben eine hohe Dichte an intakten EBCs, was deren Funktion als externe Salzspeicher besonders zum Schutz dieser jungen Blätter nahelegt. mRNA-Sequenzierungen ergaben darüber hinaus, dass die EBCs bereits unter Kontrollbedingungen viele in grundlegende Stoffwechselprozesse involvierte Gene sowie membranständige Transportproteine differentiell exprimieren. Diese Unterschiede im Transkriptom der EBCs zum Blattgewebe zeigen, dass katabole Stoffwechselwege nur eine untergeordnete Rolle in den hochspezialisierten EBCs spielen und deren Stoffwechsel auf dem Import energiereicher Zucker und Aminosäuren basiert.
Mittels qPCR-Messungen und RNA-Sequenzierungen konnte ich die gewebespezifische Expression verschiedener Transportproteine nachweisen, die eine gerichtete Aufnahme von Natrium in EBCs ermöglichen könnten. Besonders die differentielle Expression eines Natriumkanals der HKT1-Familie deutet auf dessen Beteiligung an der Natriumbeladung der EBCs hin. CqHKT1.2 wurde ausschließlich in EBCs exprimiert und die elektrophysiologische Charakterisierung dieses Transportproteins ergab eine spannungsabhängige Natriumleitfähigkeit. Dieser Natriumkanal kann demnach die Natriumaufnahme bei Membranspannungen nahe dem Ruhepotential in die EBCs vermitteln und die Deaktivierung des CqHKT1.2 bei depolarisierenden Membranspannungen kann darüber hinaus einen Efflux von Na+ aus den EBCs verhindern. Auch das Expressionsmuster eines putativen Na+/H+-Antiporters (CqSOS1) der nur sehr gering in EBCs aber deutlich höher in Blattgewebe exprimiert wurde, deutet auf eine indirekte Beteiligung dieses SOS1 an der Beladung der EBCs hin. Bereits charakterisierte SOS1-Proteine anderer Pflanzen zeigten unter physiologischen Bedingungen eine Natriumexport-Aktivität. CqSOS1 könnte demnach den Export von Natrium aus Mesophyll- und Epidermiszellen der Blätter in den Apoplasten vermitteln, welches dann über CqHKT1.2 in die EBCs aufgenommen wird.
Trotz der Natriumaufnahme in die oberirdischen Teile und die EBCs führte die Salzbehandlung ähnlich wie bei den Datteln nicht zu einer Abnahme des bemerkenswert hohen Kaliumgehalts. Mittels qPCR-Untersuchungen konnte ich die Expression verschiedener HAK-Orthologe nachweisen, deren Aktivität die Aufrechterhaltung des Kaliumgehalts unter Salzstress vermitteln könnten. Frühere Studien konnten zeigen, dass Salzstress bei Quinoa wie bei vielen salztoleranten Arten zu einem Anstieg der Konzentration von kompatiblen gelösten Substanzen und besonders von Prolin führt. In dieser Arbeit konnte ich die hohe Expression eines Prolintransporters in EBCs nachweisen, was eher auf einen importbasierten Anstieg der Prolinkonzentration als auf die Synthese innerhalb der EBCs schließen lässt.
Zusammengefasst ergaben der Anstieg des Natriumgehalts der EBCs in Verbindung mit den Ergebnissen der RNA-Sequenzierung und den ergänzenden qPCR Messungen, dass die EBCs von Quinoa bereits unter Kontrollbedingen für die Aufnahme von überschüssigen Ionen unter Salzstress spezialisierte Zellen sind, deren Spezialisierung auf dem Import von energiereichreichen Zucken und anderen Substanzen basiert.
Anthropogenic and environmental drivers shape diversity of naturalized plants across the Pacific
(2021)
Aim
The Pacific exhibits an exceptional number of naturalized plant species, but the drivers of this high diversity and the associated compositional patterns remain largely unknown. Here, we aim to (a) improve our understanding of introduction and establishment processes and (b) evaluate whether this information is sufficient to create scientific conservation tools, such as watchlists.
Location
Islands in the Pacific Ocean, excluding larger islands such as New Zealand, Japan, the Philippines and Indonesia.
Methods
We combined information from the most up‐to‐date data sources to quantify naturalized plant species richness and turnover across island groups and investigate the effects of anthropogenic, biogeographic and climate drivers on these patterns. In total, we found 2,672 naturalized plant species across 481 islands and 50 island groups, with a total of 11,074 records.
Results
Most naturalized species were restricted to few island groups, and most island groups have a low number of naturalized species. Island groups with few naturalized species were characterized by a set of widespread naturalized species. Several plant families that contributed many naturalized species globally also did so in the Pacific, particularly Fabaceae and Poaceae. However, many families were significantly over‐ or under‐represented in the Pacific naturalized flora compared to other regions of the world. Naturalized species richness increased primarily with increased human activity and island altitude/area, whereas similarity between island groups in temperature along with richness differences was most important for beta diversity.
Main conclusions
The distribution and richness of naturalized species can be explained by a small set of drivers. The Pacific region contains many naturalized plant species also naturalized in other regions in the world, but our results highlight key differences such as a stronger role of anthropogenic drivers in shaping diversity patterns. Our results establish a basis for predicting and preventing future naturalizations in a threatened biodiversity hotspot.
Conventional bivalent IgG antibodies targeting a subgroup of receptors of the TNF superfamily (TNFSF) including fibroblast growth factor-inducible 14 (anti-Fn14) typically display no or only very limited agonistic activity on their own and can only trigger receptor signaling by crosslinking or when bound to Fcγ receptors (FcγR). Both result in proximity of multiple antibody-bound TNFRSF receptor (TNFR) molecules, which enables engagement of TNFR-associated signaling pathways. Here, we have linked anti-Fn14 antibodies to gold nanoparticles to mimic the “activating” effect of plasma membrane-presented FcγR-anchored anti-Fn14 antibodies. We functionalized gold nanoparticles with poly-ethylene glycol (PEG) linkers and then coupled antibodies to the PEG surface of the nanoparticles. We found that Fn14 binding of the anti-Fn14 antibodies PDL192 and 5B6 is preserved upon attachment to the nanoparticles. More importantly, the gold nanoparticle-presented anti-Fn14 antibody molecules displayed strong agonistic activity. Our results suggest that conjugation of monoclonal anti-TNFR antibodies to gold nanoparticles can be exploited to uncover their latent agonism, e.g., for immunotherapeutic applications.
Circadian clocks prepare the organism to cyclic environmental changes in light, temperature, or food availability. Here, we characterized the master clock in the brain of a strongly photoperiodic insect, the aphid Acyrthosiphon pisum, immunohistochemically with antibodies against A. pisum Period (PER), Drosophila melanogaster Cryptochrome (CRY1), and crab Pigment-Dispersing Hormone (PDH). The latter antibody detects all so far known PDHs and PDFs (Pigment-Dispersing Factors), which play a dominant role in the circadian system of many arthropods. We found that, under long days, PER and CRY are expressed in a rhythmic manner in three regions of the brain: the dorsal and lateral protocerebrum and the lamina. No staining was detected with anti-PDH, suggesting that aphids lack PDF. All the CRY1-positive cells co-expressed PER and showed daily PER/CRY1 oscillations of high amplitude, while the PER oscillations of the CRY1-negative PER neurons were of considerable lower amplitude. The CRY1 oscillations were highly synchronous in all neurons, suggesting that aphid CRY1, similarly to Drosophila CRY1, is light sensitive and its oscillations are synchronized by light-dark cycles. Nevertheless, in contrast to Drosophila CRY1, aphid CRY1 was not degraded by light, but steadily increased during the day and decreased during the night. PER was always located in the nuclei of the clock neurons, while CRY was predominantly cytoplasmic and revealed the projections of the PER/CRY1-positive neurons. We traced the PER/CRY1-positive neurons through the aphid protocerebrum discovering striking similarities with the circadian clock of D. melanogaster: The CRY1 fibers innervate the dorsal and lateral protocerebrum and putatively connect the different PER-positive neurons with each other. They also run toward the pars intercerebralis, which controls hormone release via the neurohemal organ, the corpora cardiaca. In contrast to Drosophila, the CRY1-positive fibers additionally travel directly toward the corpora cardiaca and the close-by endocrine gland, corpora allata. This suggests a direct link between the circadian clock and the photoperiodic control of hormone release that can be studied in the future.
Coagulase-negative staphylococci (CoNS) are common opportunistic pathogens, but also ubiquitous human and animal commensals. Infection-associated CoNS from healthcare environments are typically characterized by pronounced antimicrobial resistance (AMR) including both methicillin- and multidrug-resistant isolates. Less is known about AMR patterns of CoNS colonizing the general population. Here we report on AMR in commensal CoNS recovered from 117 non-hospitalized volunteers in a region of Germany with a high livestock density. Among the 69 individuals colonized with CoNS, 29 had reported contacts to either companion or farm animals. CoNS were selectively cultivated from nasal swabs, followed by species definition by 16S rDNA sequencing and routine antibiotic susceptibility testing. Isolates displaying phenotypic AMR were further tested by PCR for presence of selected AMR genes. A total of 127 CoNS were isolated and Staphylococcus epidermidis (75%) was the most common CoNS species identified. Nine isolates (7%) were methicillin-resistant (MR) and carried the mecA gene, with seven individuals (10%) being colonized with at least one MR-CoNS isolate. While resistance against gentamicin, phenicols and spectinomycin was rare, high resistance rates were found against tetracycline (39%), erythromycin (33%) and fusidic acid (24%). In the majority of isolates, phenotypic resistance could be associated with corresponding AMR gene detection. Multidrug-resistance (MDR) was observed in 23% (29/127) of the isolates, with 33% (23/69) of the individuals being colonized with MDR-CoNS. The combined data suggest that MR- and MDR-CoNS are present in the community, with previous animal contact not significantly influencing the risk of becoming colonized with such isolates.
Antimicrobial stewardship measures in cardiac surgery and its impact on surgical site infections
(2021)
Objective
The goal of this study was to monitor the compliance and impact on a protocol change of surgical antimicrobial prophylaxis in cardiac surgery favouring cefazolin instead cefuroxime, initiated by the hospital’s antimicrobial stewardship team.
Methods
This quality improvement study was performed in a tertiary care hospital in collaboration with the department of cardiothoracic surgery and the hospitals antimicrobial stewardship team following a revision of the standard for surgical antimicrobial prophylaxis including 1029 patients who underwent cardiac surgery. 582 patients receiving cefuroxime and 447 patients receiving cefazolin respectively were compared without altering any other preventative perioperative measures including its postoperative duration of less than 24 h. Adherence and surgical site infections were compiled and analysed.
Results
A complete adherence was achieved. Overall surgical site infections occurred in 37 (3.6%) of the cases, 20 (3.4%) in cefuroxime patients and 17 (3.8%) in cefazolin patients (p value = 0.754). No statistically significant differences could be found in any of the primary endpoints, but there was a trend towards less deep sternal wound infections in the cefazolin group.
Conclusions
The study supports the role of antimicrobial stewardship in cardiac surgery and mirrors the success of a multidisciplinary team aiming to minimize adverse events by optimizing antibiotic use.
Die akute Appendizitis stellt die häufigste Ursache des akuten Abdomens jenseits des Säuglings- und Kleinkindalters dar. Gerade aufgrund der erschwerten Diagnostik und des häufig foudroyanten Verlaufes bei jüngeren Kindern sind eine frühzeitige Diagnosestellung und adäquate Therapie dieser Erkrankung von unermesslichem Wert.
Diese retrospektive Studie befasst sich mit Kindern und Jugendlichen unter 18 Jahren, die im Zeitraum vom 01.05.2008 bis 31.05.2013 in der Abteilung für Kinderchirurgie des Universitätsklinikums Würzburg appendektomiert und postoperativ betreut wurden. Simultaneingriffe, wie z.B. Appendektomie bei Malrotation, wurden hierbei ausgeschlossen.
Ziel der vorliegenden Dissertation war es unter anderem, das präoperative Management bezüglich der Diagnostik einer Appendizitis darzustellen und zu beurteilen. Hierbei wurde auch die Bedeutung der Leukozytenzahl sowie des C-reaktiven Proteins untersucht. Ein weiterer Fokus lag darauf, die intraoperative Einschätzung des makroskopischen Befundes durch den Operateur dem jeweiligen histopathologischen Befund gegenüberzustellen. Darüber hinaus wurde das Patientengut hinsichtlich des Verteilungsmusters von Alter und Geschlecht beleuchtet und der Frage nachgegangen, ob es einen möglichen Zusammenhang zwischen dem Auftreten einer Appendizitis und der jeweiligen Jahreszeit bzw. Wetterlage gibt. Abschließend lag ein Schwerpunkt der Arbeit darauf, den Stellenwert der laparoskopischen Appendektomie bei Kindern am UKW zu ermitteln und mögliche Vorteile dieses minimalinvasiven Operationsverfahrens gegenüber der konventionellen Appendektomie zu untersuchen. Die Einordnung und Diskussion der Ergebnisse erfolgte anhand der aktuellen Literatur beziehungsweise Studienlage.
Recently, locust outbreaks around the world have destroyed agricultural and natural vegetation and caused massive damage endangering food security. Unusual heavy rainfalls in habitats of the desert locust (Schistocerca gregaria) and lack of monitoring due to political conflicts or inaccessibility of those habitats lead to massive desert locust outbreaks and swarms migrating over the Arabian Peninsula, East Africa, India and Pakistan. At the same time, swarms of the Moroccan locust (Dociostaurus maroccanus) in some Central Asian countries and swarms of the Italian locust (Calliptamus italicus) in Russia and China destroyed crops despite developed and ongoing monitoring and control measurements. These recent events underline that the risk and damage caused by locust pests is as present as ever and affects 100 million of human lives despite technical progress in locust monitoring, prediction and control approaches. Remote sensing has become one of the most important data sources in locust management. Since the 1980s, remote sensing data and applications have accompanied many locust management activities and contributed to an improved and more effective control of locust outbreaks and plagues. Recently, open-access remote sensing data archives as well as progress in cloud computing provide unprecedented opportunity for remote sensing-based locust management and research. Additionally, unmanned aerial vehicle (UAV) systems bring up new prospects for a more effective and faster locust control. Nevertheless, the full capacity of available remote sensing applications and possibilities have not been exploited yet. This review paper provides a comprehensive and quantitative overview of international research articles focusing on remote sensing application for locust management and research. We reviewed 110 articles published over the last four decades, and categorized them into different aspects and main research topics to summarize achievements and gaps for further research and application development. The results reveal a strong focus on three species — the desert locust, the migratory locust (Locusta migratoria), and the Australian plague locust (Chortoicetes terminifera) — and corresponding regions of interest. There is still a lack of international studies for other pest species such as the Italian locust, the Moroccan locust, the Central American locust (Schistocerca piceifrons), the South American locust (Schistocerca cancellata), the brown locust (Locustana pardalina) and the red locust (Nomadacris septemfasciata). In terms of applied sensors, most studies utilized Advanced Very-High-Resolution Radiometer (AVHRR), Satellite Pour l’Observation de la Terre VEGETATION (SPOT-VGT), Moderate-Resolution Imaging Spectroradiometer (MODIS) as well as Landsat data focusing mainly on vegetation monitoring or land cover mapping. Application of geomorphological metrics as well as radar-based soil moisture data is comparably rare despite previous acknowledgement of their importance for locust outbreaks. Despite great advance and usage of available remote sensing resources, we identify several gaps and potential for future research to further improve the understanding and capacities of the use of remote sensing in supporting locust outbreak- research and management.
Process models are crucial artifacts in many domains, and hence, their proper comprehension is of importance. Process models mediate a plethora of aspects that are needed to be comprehended correctly. Novices especially face difficulties in the comprehension of process models, since the correct comprehension of such models requires process modeling expertise and visual observation capabilities to interpret these models correctly. Research from other domains demonstrated that the visual observation capabilities of experts can be conveyed to novices. In order to evaluate the latter in the context of process model comprehension, this paper presents the results from ongoing research, in which gaze data from experts are used as Eye Movement Modeling Examples (EMMEs) to convey visual observation capabilities to novices. Compared to prior results, the application of EMMEs improves process model comprehension significantly for novices. Novices achieved in some cases similar performances in process model comprehension to experts. The study's insights highlight the positive effect of EMMEs on fostering the comprehension of process models.
Biointerface engineering is a wide-spread strategy to improve the healing process and subsequent tissue integration of biomaterials. Especially the integration of specific peptides is one promising strategy to promote the regenerative capacity of implants and 3D scaffolds. In vivo, these tailored interfaces are, however, first confronted with the innate immune response. Neutrophils are cells with pronounced proteolytic potential and the first recruited immune cells at the implant site; nonetheless, they have so far been underappreciated in the design of biomaterial interfaces. Herein, an in vitro approach is introduced to model and analyze the neutrophil interaction with bioactivated materials at the example of nano-bioinspired electrospun surfaces that reveals the vulnerability of a given biointerface design to the contact with neutrophils. A sacrificial, transient hydrogel coating that demonstrates optimal protection for peptide-modified surfaces and thus alleviates the immediate cleavage by neutrophil elastase is further introduced.
Digital anamorphosis is used to define a distorted image of health and care that may be viewed correctly using digital tools and strategies. MASK digital anamorphosis represents the process used by MASK to develop the digital transformation of health and care in rhinitis. It strengthens the ARIA change management strategy in the prevention and management of airway disease. The MASK strategy is based on validated digital tools. Using the MASK digital tool and the CARAT online enhanced clinical framework, solutions for practical steps of digital enhancement of care are proposed.
The present study focuses on Rulin waishi 儒林外史 (The Unofficial History of the Scholars), a well-known Qing novel, from the perspective of gender. It attempts to contribute to the discussion about Chinese masculinity by identifying the representation of the scholars' masculinity in Rulin waishi and offer a better understanding of the novel's position regarding femininity and women.
This project shows that the novel nevertheless reflects rather than challenges gender ideologies of its time. The ideal manhood showed in the novel comprises real virtues and authentic learning. It goes against the traditional, orthodox Confucian masculinity which advocates that officialdom is the glorious path to fulfill a learned man's masculinity. It is mainly due to Wu Jingzi's own failure in the civil service examinations and official careers. Regarding the relation of masculinity and sexuality, the novel reveals that a masculine man is not tempted by female charm but can enjoy a harmonious and companionate marriage. Besides, scholars show great anxiety about their masculinity since they are in a marginal position in society. Their manliness is challenged by officials, merchants, and even commoners, as well as their colleagues.
Through a careful examination of stories of Pinniang, Miss Lu, and Mrs. Wang, it reveals that the novel holds a conventional opinion on women although it criticizes widow suicide and shows an egalitarian husband-wife relationship. It praises Confucian womanly virtues, such as following and serving the husband, managing the household, and keeping chastity. Female sexuality is blamed as an evil temptation to lead men to go astray. Women’s learning gains legitimacy when serving to fulfill domestic responsibilities. It carries the Confucian message that men should take the lead and maintain order in the household and reinforces the rightful patriarchy.
In a word, rather than go ahead of its time, Rulin waishi holds a conservative attitude towards gender issues.
Aspergillus is an important fungal genus containing economically important species, as well as pathogenic species of animals and plants. Using eighteen fungal species of the genus Aspergillus, we conducted a comprehensive investigation of conserved genes and their evolution. This also allows us to investigate the selection pressure driving the adaptive evolution in the pathogenic species A. fumigatus. Among single-copy orthologs (SCOs) for A. fumigatus and the closely related species A. fischeri, we identified 122 versus 50 positively selected genes (PSGs), respectively. Moreover, twenty conserved genes of unknown function were established to be positively selected and thus important for adaption. A. fumigatus PSGs interacting with human host proteins show over-representation of adaptive, symbiosis-related, immunomodulatory and virulence-related pathways, such as the TGF-β pathway, insulin receptor signaling, IL1 pathway and interfering with phagosomal GTPase signaling. Additionally, among the virulence factor coding genes, secretory and membrane protein-coding genes in multi-copy gene families, 212 genes underwent positive selection and also suggest increased adaptation, such as fungal immune evasion mechanisms (aspf2), siderophore biosynthesis (sidD), fumarylalanine production (sidE), stress tolerance (atfA) and thermotolerance (sodA). These genes presumably contribute to host adaptation strategies. Genes for the biosynthesis of gliotoxin are shared among all the close relatives of A. fumigatus as an ancient defense mechanism. Positive selection plays a crucial role in the adaptive evolution of A. fumigatus. The genome-wide profile of PSGs provides valuable targets for further research on the mechanisms of immune evasion, antimycotic targeting and understanding fundamental virulence processes.
Assessing protein biomarkers to detect lethal acute traumatic brain injuries in cerebrospinal fluid
(2021)
Diagnosing traumatic brain injury (TBI) from body fluids in cases where there are no obvious external signs of impact would be useful for emergency physicians and forensic pathologists alike. None of the previous attempts has so far succeeded in establishing a single biomarker to reliably detect TBI with regards to the sensitivity: specificity ratio in a post mortem setting. This study investigated a combination of body fluid biomarkers (obtained post mortem), which may be a step towards increasing the accuracy of biochemical TBI detection. In this study, serum and cerebrospinal fluid (CSF) samples from 30 acute lethal TBI cases and 70 controls without a TBI-related cause of death were evaluated for the following eight TBI-related biomarkers: brain-derived neurotrophic factor (BDNF), ferritin, glial fibrillary acidic protein (GFAP), interleukin 6 (IL-6), lactate dehydrogenase, neutrophil gelatinase-associated lipocalin (NGAL), neuron-specific enolase and S100 calcium-binding protein B. Correlations among the individual TBI biomarkers were assessed, and a specificity-accentuated threshold value analysis was conducted for all biomarkers. Based on these values, a decision tree modelling approach was performed to assess the most accurate biomarker combination to detect acute lethal TBIs. The results showed that 92.45% of acute lethal TBIs were able to be diagnosed using a combination of IL-6 and GFAP in CSF. The probability of detecting an acute lethal TBI was moderately increased by GFAP alone and considerably increased by the remaining biomarkers. BDNF and NGAL were almost perfectly correlated (p = 0.002; R\(^2\) = 0.944). This study provides evidence that acute lethal TBIs can be detected to a high degree of statistical accuracy using forensic biochemistry. The high inter-individual correlations of biomarkers may help to estimate the CSF concentration of an unknown biomarker, using extrapolation techniques.
DD is a cardiac disturbance, which has gained increasing importance in recent years due to its important role in different cardiac disease and cardiomyopathies including ischemic cardiomyopathy, arterial hypertension and diabetic cardiomyopathy.
ECG-gated 18F-FDG PET is an imaging technique, that can distinguish between districts of myocardial viability and myocardial scars and further provides information of great interest on the efficacy of experimental approaches designed to improve the cardiac function and/or myocardial metabolism in experimental small animal models. However, ECG-gated 18F-FDG PET is a technique whose feasibility in the assessment of the LV diastolic function in small animals has not been a subject of study.
In this thesis, the ability of the ECG-gated 18F-FDG PET for the assessment of both the systolic and diastolic function in eight control rats and in seven ZDF rats, which are an experimental animal model mimicking T2DM conditions and diabetic related complications in humans including DCM, has been investigated The ECG-gated 18F-FDG PET imaging was performed under hyperinsulinemic-euglycemic clamping and the data were stored in list mode files and retrospectively reconstructed. The systolic and diastolic parameters were achieved from the time/volume and the time/filling curve calculated from the software HFV. Additionally, the influence of the number of gates per cardiac cycle on the LV volumes and function parameters has been studied.
Hyperinsulinemic-euglycemic clamp procedure and blood glucose measurement did confirm the development of a manifest diabetes in the ZDF rats at the timepoint of the experiments.
Regarding the systolic parameters, no significant difference could be detected between the ZDF and ZL rats. The values for the CO were similar in both groups, which demonstrates a similar LV systolic function in the ZDF and the ZL rats at the age of 13 weeks. Values for the systolic parameters are in good line with previous PET, MRI and cardiac catheterization-based studies in diabetic rats.
The main finding of this study was that by using in vivo ECG-gated 18F-FDG PET and the software HFV, reliable diastolic parameters could be calculated. Moreover, it was possible to detect the presence of a mild impaired diastolic filling in the ZDF rats in absence of any systolic alteration. This impaired diastolic function in an early stage of diabetes could also be detected by other investigators, who used echocardiography or cardiac catheterization. Therefore, this is the first study showing, that the assessment of the diastolic function in rats can be carried out by ECG-gated 18F-FDG PET imaging.
In conclusion, additionally to calculating LV volumes and LV EF, ECG-gated 18F-FDG PET can evaluate the diastolic function of healthy and diabetic rats and is able to detect a DD in ZDF rats.
Health-related quality of life (HRQL) among migrant populations can be associated with acculturation (i.e., the process of adopting, acquiring and adjusting to a new cultural environment). Since there is a lack of longitudinal studies, we aimed to describe HRQL changes among adults of Turkish descent living in Berlin and Essen, Germany, and their association with acculturation. Participants of a population-based study were recruited in 2012–2013 and reinvited six years later to complete a questionnaire. Acculturation was assessed at baseline using the Frankfurt acculturation scale (integration, assimilation, separation and marginalization). HRQL was assessed at baseline (SF-8) and at follow-up (SF-12) resulting in a physical (PCS) and mental (MCS) sum score. Associations with acculturation and HRQL were analyzed with linear regression models using a time-by-acculturation status interaction term. In the study 330 persons were included (65% women, mean age ± standard deviation 43.3 ± 11.8 years). Over the 6 years, MCS decreased, while PCS remained stable. While cross-sectional analyses showed associations of acculturation status with both MCS and PCS, temporal changes including the time interaction term did not reveal associations of baseline acculturation status with HRQL. When investigating HRQL in acculturation, more longitudinal studies are needed to take changes in both HRQL and acculturation status into account.
Purpose
To investigate the association of patients’ sex with recurrence and disease progression in patients treated with intravesical bacillus Calmette–Guérin (BCG) for T1G3/HG urinary bladder cancer (UBC).
Materials and methods
We analyzed the data of 2635 patients treated with adjuvant intravesical BCG for T1 UBC between 1984 and 2019. We accounted for missing data using multiple imputations and adjusted for covariate imbalance between males and females using inverse probability weighting (IPW). Crude and IPW-adjusted Cox regression analyses were used to estimate the hazard ratios (HR) with their 95% confidence intervals (CI) for the association of patients’ sex with HG-recurrence and disease progression.
Results
A total of 2170 (82%) males and 465 (18%) females were available for analysis. Overall, 1090 (50%) males and 244 (52%) females experienced recurrence, and 391 (18%) males and 104 (22%) females experienced disease progression. On IPW-adjusted Cox regression analyses, female sex was associated with disease progression (HR 1.25, 95%CI 1.01–1.56, p = 0.04) but not with recurrence (HR 1.06, 95%CI 0.92–1.22, p = 0.41). A total of 1056 patients were treated with adequate BCG. In these patients, on IPW-adjusted Cox regression analyses, patients’ sex was not associated with recurrence (HR 0.99, 95%CI 0.80–1.24, p = 0.96), HG-recurrence (HR 1.00, 95%CI 0.78–1.29, p = 0.99) or disease progression (HR 1.12, 95%CI 0.78–1.60, p = 0.55).
Conclusion
Our analysis generates the hypothesis of a differential response to BCG between males and females if not adequately treated. Further studies should focus on sex-based differences in innate and adaptive immune system and their association with BCG response.
Threat detection plays a vital role in adapting behavior to changing environments. A fundamental function to improve threat detection is learning to differentiate between stimuli predicting danger and safety. Accordingly, aversive learning should lead to enhanced sensory discrimination of danger and safety cues. However, studies investigating the psychophysics of visual and auditory perception after aversive learning show divergent findings, and both enhanced and impaired discrimination after aversive learning have been reported. Therefore, the aim of this web-based study is to examine the impact of aversive learning on a continuous measure of visual discrimination. To this end, 205 participants underwent a differential fear conditioning paradigm before and after completing a visual discrimination task using differently oriented grating stimuli. Participants saw either unpleasant or neutral pictures as unconditioned stimuli (US). Results demonstrated sharpened visual discrimination for the US-associated stimulus (CS+), but not for the unpaired conditioned stimuli (CS-). Importantly, this finding was irrespective of the US's valence. These findings suggest that associative learning results in increased stimulus salience, which facilitates perceptual discrimination in order to prioritize attentional deployment.
Derzeit gilt das Vulnerabilitäts-Stressmodell im Sinne eines multifaktoriellen Erklärungsmodells als am besten geeignet, um die Ätiopathogenese der Angsterkrankungen abzubilden. Als Brücke zwischen den genetischen Faktoren und den auf ein Individuum einwirkenden Umweltfaktoren werden epigenetische Mechanismen verstanden. Hierzu zählt die Methylierung bestimmter DNA-Bereiche, welche durch die DNA-Methyltransferasen vermittelt wird. Diese Enzyme waren in Verbindung mit Angsterkrankungen bisher kaum im Fokus psychiatrischer Forschung.
Diese Arbeit beschäftigt sich daher mit ausgewählten Einzelnukleotidpolymorphismen des DNMT3A- und DNMT3B-Gens und untersucht, ob diese SNPs und/oder deren Haplotypen zum einen mit der Panikstörung und zum andern mit dimensionalen psychologischen Charakteristiken, wie angstbezogener Kognition oder Angstsensitivität, assoziiert sind.
Zusammenfassend konnte eine signifikante bzw. nominal signifikante Assoziation der zweier SNPs mit angstbezogenen Charakteristiken wie der angstbezogenen Kognition und der Angstsensitivität gezeigt werden.
Um die gefundenen Assoziationen besser beurteilen zu können, ist in Folgeuntersuchungen eine Replikation in einer weiteren Probandengruppe und in einer angemessen großen Patienten- und Fall-Kontroll-Gruppe mit ausreichender Teststärke erforderlich. Aufgrund der nachgewiesenen Assoziation mit dem PSWQ bietet sich auch die Untersuchung eines anderen Angstphänotypen, der Generalisierten Angststörung, an. Als weiterer Schritt sind Untersuchungen zur Klärung der Funktionalität der signifikant assoziierten SNPs anzustreben. In der Literatur wird zudem eine weitere DNMT, die Dnmt1, mit der Furchtkonditionierung assoziiert und auch die Methylierungsmuster der DNMTs selbst scheinen einen Einfluss auf die Entwicklung von Angststörungen zu haben. Eine Untersuchung des DNMT1-Gens und der Methylierungsmuster der DNMT-Gene sind daher weitere sinnvolle Schritte, um einen möglichen Einfluss von DNMTs auf die Entstehung von Angsterkrankungen und auf angstbezogene psychologische Charakteristiken besser zu verstehen.
Die WHO-Klassifikation der Hirntumoren von 2016 ebnete den Weg für molekulare Marker und Therapie-Angriffspunkte. Der Transkriptionsfaktor ATF5 könnte ein solcher sein. Er unterdrückt die Differenzierung von neuronalen Vorläuferzellen und wird in Glioblastomen (GBM) überexprimiert. Daten zur ATF5-Expression in WHO Grad II Gliomen (LGG) und GBM-Rezidiven sind nur spärlich vorhanden. Daher untersuchten wir 79 GBM, 40 LGG und 10 Normalhirnproben auf ihre ATF5-mRNA- und Proteinexpression mit quantitativer Echtzeit-PCR bzw. Immunhistochemie und verglichen sie mit multiplen, retrospektiv erhobenen klinischen Charakteristika der Patienten. ATF5 war in LGG und GBM verglichen zum Normalhirn sowohl auf mRNA-, als auch Proteinebene überexprimiert. Obwohl die ATF5-mRNA-Expression im GBM eine erhebliche Fluktuationsrate zeigte, gab es keine signifikanten Expressionsunterschiede zwischen GBM-Gruppen unterschiedlicher biologischer Wachstumsmuster. ATF5-mRNA korrelierte mit dem Alter der Patienten und invers mit der Ki67-Färbung. Kaplan Meier- und Cox-Regressionsanalysen zeigten eine signifikante Korrelation der ATF5-mRNA-Expression mit dem Überleben nach 12 Monaten sowie dem progressionsfreien Überleben. Die Methylierung des Promotors der O6-Methylguanin-DNA-Methyltransferase (MGMT) ist ein etablierter Marker in der Therapie des GBMs. Sie ist mit dem therapeutischen Ansprechen auf Temozolomid und dem Überleben assoziiert. Uns fielen inzidentell Veränderungen der MGMT-Promotormethylierung auf, woraufhin wir den aktuellen Wissensstand mittels einer ausführlichen Literatur-Metaanalyse zusammenfassten. Dabei fanden wir Veränderungen der MGMT-Promotormethylierung bei 115 der 476 Patienten. Wir schlussfolgern, dass die ATF5-mRNA-Expression als prognostischer Faktor für das Überleben der Patienten dienen könnte. Da seine in vitro-Inhibition zu einem selektiven Zelltod von Gliomzellen führte und wir eine Überexpression in glialen Tumoren nachweisen konnten, zeigt ATF5 Potential als ubiquitäres Therapieziel in Gliomen. Zum aktuellen Zeitpunkt ergibt sich keine klare Indikation, den klinischen Standard der MGMT-Teststrategie zu verändern. Trotzdem könnte eine erneute Testung der MGMT-Promotormethylierung für zukünftige Therapieentscheidungen sinnvoll sein und wir regen an, dass dieses Thema in klinischen Studien weiter untersucht wird.
Over the last decades, cybersecurity has become an increasingly important issue. Between 2019 and 2011 alone, the losses from cyberattacks in the United States grew by 6217%. At the same time, attacks became not only more intensive but also more and more versatile and diverse. Cybersecurity has become everyone’s concern. Today, service providers require sophisticated and extensive security infrastructures comprising many security functions dedicated to various cyberattacks. Still, attacks become more violent to a level where infrastructures can no longer keep up. Simply scaling up is no longer sufficient. To address this challenge, in a whitepaper, the Cloud Security Alliance (CSA) proposed multiple work packages for security infrastructure, leveraging the possibilities of Software-defined Networking (SDN) and Network Function Virtualization (NFV).
Security functions require a more sophisticated modeling approach than regular network functions. Notably, the property to drop packets deemed malicious has a significant impact on Security Service Function Chains (SSFCs)—service chains consisting of multiple security functions to protect against multiple at- tack vectors. Under attack, the order of these chains influences the end-to-end system performance depending on the attack type. Unfortunately, it is hard to predict the attack composition at system design time. Thus, we make a case for dynamic attack-aware SSFC reordering. Also, we tackle the issues of the lack of integration between security functions and the surrounding network infrastructure, the insufficient use of short term CPU frequency boosting, and the lack of Intrusion Detection and Prevention Systems (IDPS) against database ransomware attacks.
Current works focus on characterizing the performance of security functions and their behavior under overload without considering the surrounding infrastructure. Other works aim at replacing security functions using network infrastructure features but do not consider integrating security functions within the network. Further publications deal with using SDN for security or how to deal with new vulnerabilities introduced through SDN. However, they do not take security function performance into account. NFV is a popular field for research dealing with frameworks, benchmarking methods, the combination with SDN, and implementing security functions as Virtualized Network
Functions (VNFs). Research in this area brought forth the concept of Service Function Chains (SFCs) that chain multiple network functions after one another. Nevertheless, they still do not consider the specifics of security functions. The mentioned CSA whitepaper proposes many valuable ideas but leaves their realization open to others.
This thesis presents solutions to increase the performance of single security functions using SDN, performance modeling, a framework for attack-aware SSFC reordering, a solution to make better use of CPU frequency boosting, and an IDPS against database ransomware.
Specifically, the primary contributions of this work are:
• We present approaches to dynamically bypass Intrusion Detection Systems (IDS) in order to increase their performance without reducing the security level. To this end, we develop and implement three SDN-based approaches (two dynamic and one static).
We evaluate the proposed approaches regarding security and performance and show that they significantly increase the performance com- pared to an inline IDS without significant security deficits. We show that using software switches can further increase the performance of the dynamic approaches up to a point where they can eliminate any throughput drawbacks when using the IDS.
• We design a DDoS Protection System (DPS) against TCP SYN flood at tacks in the form of a VNF that works inside an SDN-enabled network. This solution eliminates known scalability and performance drawbacks of existing solutions for this attack type.
Then, we evaluate this solution showing that it correctly handles the connection establishment and present solutions for an observed issue. Next, we evaluate the performance showing that our solution increases performance up to three times. Parallelization and parameter tuning yields another 76% performance boost. Based on these findings, we discuss optimal deployment strategies.
• We introduce the idea of attack-aware SSFC reordering and explain its impact in a theoretical scenario. Then, we discuss the required information to perform this process.
We validate our claim of the importance of the SSFC order by analyzing the behavior of single security functions and SSFCs. Based on the results, we conclude that there is a massive impact on the performance up to three orders of magnitude, and we find contradicting optimal orders
for different workloads. Thus, we demonstrate the need for dynamic reordering.
Last, we develop a model for SSFC regarding traffic composition and resource demands. We classify the traffic into multiple classes and model the effect of single security functions on the traffic and their generated resource demands as functions of the incoming network traffic. Based on our model, we propose three approaches to determine optimal orders for reordering.
• We implement a framework for attack-aware SSFC reordering based on this knowledge. The framework places all security functions inside an SDN-enabled network and reorders them using SDN flows.
Our evaluation shows that the framework can enforce all routes as desired. It correctly adapts to all attacks and returns to the original state after the attacks cease. We find possible security issues at the moment of reordering and present solutions to eliminate them.
• Next, we design and implement an approach to load balance servers while taking into account their ability to go into a state of Central Processing Unit (CPU) frequency boost. To this end, the approach collects temperature information from available hosts and places services on the host that can attain the boosted mode the longest.
We evaluate this approach and show its effectiveness. For high load scenarios, the approach increases the overall performance and the performance per watt. Even better results show up for low load workloads, where not only all performance metrics improve but also the temperatures and total power consumption decrease.
• Last, we design an IDPS protecting against database ransomware attacks that comprise multiple queries to attain their goal. Our solution models these attacks using a Colored Petri Net (CPN).
A proof-of-concept implementation shows that our approach is capable of detecting attacks without creating false positives for benign scenarios. Furthermore, our solution creates only a small performance impact.
Our contributions can help to improve the performance of security infrastructures. We see multiple application areas from data center operators over software and hardware developers to security and performance researchers. Most of the above-listed contributions found use in several research publications.
Regarding future work, we see the need to better integrate SDN-enabled security functions and SSFC reordering in data center networks. Future SSFC should discriminate between different traffic types, and security frameworks should support automatically learning models for security functions. We see the need to consider energy efficiency when regarding SSFCs and take CPU boosting technologies into account when designing performance models as well as placement, scaling, and deployment strategies. Last, for a faster adaptation against recent ransomware attacks, we propose machine-assisted learning for database IDPS signatures.
Mittels Tissue Engineering hergestellte humane 3D in vitro-Testsysteme sind ein neuer Ansatz, um u.a. Erkrankungen der Atemwege zu simulieren und zu untersuchen. Obwohl gegen B. pertussis, den Erreger des Keuchhustens, Impfstoffe zur Verfügung stehen, nimmt die Erkrankungs-Inzidenz in den letzten Jahren deutlich zu. Da B. pertussis zu den obligat humanpathogenen Erregern zählt, sind die aus Tierversuchen stammenden Daten nur unzureichend auf den Menschen übertragbar. Die genauen Pathomechanismen der Infektion sind bisher nicht geklärt.
Auf einer biologischen Kollagenmatrix wurde eine Ko-Kultur aus humanen tracheobronchialen Fibroblasten und humanen tracheobronchialen Epithelzellen (hTEC) angesiedelt und 3 Wochen unter apikaler Belüftung kultiviert. Die ausdifferenzierten 3D Testsysteme wurden mit Überständen von Bordetella pertussis-Kulturen inkubiert und auf licht- und elektronenmikroskopischer Ebene analysiert. Weiterhin wurden 2D Kulturen der hTEC mit Hilfe der Ramanspektroskopie nicht-invasiv auf intrazelluläre Veränderungen nach der Inkubation mit den bakteriellen Überständen untersucht.
Das 3D Testsystem der humanen Atemwegschleimhaut zeigte auf lichtmikroskopischer und ultrastruktureller Ebene eine hohe in vitro – in vivo-Korrelation. Die elektronenmikroskopische Analyse zeigte morphologische Veränderungen nach der Inkubation mit den B. pertussis Überständen, die mit vorbeschrieben Effekten einer B. pertussis Infektion korrelieren. Mittels der Ramanspektroskopie ließen sich Gruppen von unbehandelten Zellen von Gruppen, die zuvor mit Bakterienüberständen inkubiert wurden, trennen. Somit zeigte sich die Ramanspektroskopie sensitiv für intrazelluläre Infektionsfolgen.
Zusammenfassend wurde belegt, dass das 3D-Modell der humanen Atemwegschleimhaut zur Untersuchung obligat humanpathogener Infektionserreger geeignet ist und dass die Ramanspektroskopie eine nicht-invasive Methode ist, um durch Infektionen hervorgerufene intrazellulären Pathologien zu analysieren.
Da in den letzten Jahrzehnten nur geringfügige Verbesserungen der Überlebensraten bei an einem Pankreaskarzinom erkrankten Patienten erzielt wurden, besteht ein dringender klinischer Bedarf für die Entwicklung wirksamer therapeutischer Strategien. Dreidimensionale in vitro Modelle sind für das Screening und die Validierung von Therapeutika essenziell.
In der vorliegenden Arbeit konnte mittels der Methoden des Tissue Engineerings ein biolumineszenzbasiertes dreidimensionales in vitro Testsystem des pankreatischen Karzinoms aufgebaut und charakterisiert werden. Für die Detektion von LumineszenzIntensitäten wurde die pankreatische Krebszelllinie PANC-1 zuvor mit firefly luciferase (FLUC) transduziert. PANC-1 FLUC Zellen wurden auf porziner Pankreasmatrix (PanMa) und Dünndarmmatrix (SISser) kultiviert, um den Einfluss unterschiedlicher Matrizen auf das Verhalten der Zellen im Tumormodell zu untersuchen. Darüber hinaus wurden in dieser Arbeit die PANC-1 FLUC mit einem Standardtherapeutikum der Pankreaskarzinomtherapie, Gemcitabin, behandelt und die Wirkung mittels biolumineszenbasierter Bildgebung detektiert.
Es konnte gezeigt werden, dass die Lumineszenz-Intensität von PANC-1 FLUC Zellen einer bestimmten Zellzahl durch biolumineszenzbasierte Messverfahren zugeordnet werden kann. Weiter wurde nachgewiesen, dass die Extrazellulärmatrix einen Einfluss auf die Expression tumorspezifischer Marker hat und PANC-1 FLUC Zellen ein unterschiedlich invasives Wachstum auf organspezifischen Matrizen aufweisen. Die Wirkung von Gemcitabin auf die Tumorzellen kann durch das hier vorgestellte biolumineszenzbasierte Messverfahren detektiert werden. Die in dieser Arbeit vorgestellten Ergebnisse sind die Grundlage für die weitere Validierung eines biolumineszenzbasierten dreidimemsionalen in vitro Testystems des pankreatischen Karzinoms für die präklinische Erforschung neuartiger Therapiestrategien.
Tinnitus is a phantom sound perception in the ears or head and can arise from many different medical disorders. Currently, there is no standard treatment for tinnitus that reliably reduces tinnitus. Individual patients reported that acupressure at various points around the ear can help to reduce tinnitus, which was investigated here. With this longitudinal observational study, we report a systematic evaluation of auricular acupressure on 39 tinnitus sufferers, combined with a self-help smartphone app. The participants were asked to report on tinnitus, stress, mood, neck, and jaw muscle tensions twice a day using an ecological momentary assessment study design for six weeks. On average, 123.6 questionnaires per person were provided and used for statistical analysis. The treatment responses of the participants were heterogeneous. On average, we observed significant negative trends for tinnitus loudness (Cohen's d effect size: −0.861), tinnitus distress (d = −0.478), stress (d = −0.675), and tensions in the neck muscles (d = −0.356). Comparison with a matched control group revealed significant improvements for tinnitus loudness (p = 0.027) and self-reported stress level (p = 0.003). The positive results of the observational study motivate further research including a randomized clinical trial and long-term assessment of the clinical improvement.
Neuroblastoma is the most abundant, solid, extracranial tumor in early childhood and the leading cause of cancer-related childhood deaths worldwide. Patients with high-risk neuroblastoma often show MYCN-amplification and elevated levels of Aurora-A. They have a low overall survival and despite multimodal therapy options a poor therapeutic prognosis. MYCN-amplified neuroblastoma cells depend on Aurora-A functionality. Aurora-A stabilizes MYCN and prevents it from proteasomal degradation by competing with the E3 ligase SCFFBXW7. Interaction between Aurora-A and MYCN can be observed only in S phase of the cell cycle and activation of Aurora-A can be induced by MYCN in vitro. These findings suggest the existence of a profound interconnection between Aurora-A and MYCN in S phase. Nevertheless, the details remain elusive and were investigated in this study.
Fractionation experiments show that Aurora-A is recruited to chromatin in S phase in a MYCN-dependent manner. Albeit being unphosphorylated on the activating T288 residue, Aurora-A kinase activity was still present in S phase and several putative, novel targets were identified by phosphoproteomic analysis. Particularly, eight phosphosites dependent on MYCN-activated Aurora-A were identified. Additionally, phosphorylation of serine 10 on histone 3 was verified as a target of this complex in S phase. ChIP-sequencing experiments reveal that Aurora-A regulates transcription elongation as well as histone H3.3 variant incorporation in S phase. 4sU-sequencing as well as immunoblotting demonstrated that Aurora-A activity impacts splicing. PLA measurements between the transcription and replication machinery revealed that Aurora-A prevents the formation of transcription-replication conflicts, which activate of kinase ATR.
Aurora-A inhibitors are already used to treat neuroblastoma but display dose-limiting toxicity. To further improve Aurora-A based therapies, we investigated whether low doses of Aurora-A inhibitor combined with ATR inhibitor could increase the efficacy of the treatment albeit reducing toxicity. The study shows that the combination of both drugs leads to a reduction in cell growth as well as an increase in apoptosis in MYCN-amplified neuroblastoma cells, which is not observable in MYCN non-amplified neuroblastoma cells. This new approach was also tested by a collaboration partner in vivo resulting in a decrease in tumor burden, an increase in overall survival and a cure of 25% of TH-MYCN mice. These findings indicate indeed a therapeutic window for targeting MYCN-amplified neuroblastoma.
These days, we are living in a digitalized world. Both our professional and private lives are pervaded by various IT services, which are typically operated using distributed computing systems (e.g., cloud environments). Due to the high level of digitalization, the operators of such systems are confronted with fast-paced and changing requirements. In particular, cloud environments have to cope with load fluctuations and respective rapid and unexpected changes in the computing resource demands. To face this challenge, so-called auto-scalers, such as the threshold-based mechanism in Amazon Web Services EC2, can be employed to enable elastic scaling of the computing resources. However, despite this opportunity, business-critical applications are still run with highly overprovisioned resources to guarantee a stable and reliable service operation. This strategy is pursued due to the lack of trust in auto-scalers and the concern that inaccurate or delayed adaptations may result in financial losses.
To adapt the resource capacity in time, the future resource demands must be "foreseen", as reacting to changes once they are observed introduces an inherent delay. In other words, accurate forecasting methods are required to adapt systems proactively. A powerful approach in this context is time series forecasting, which is also applied in many other domains. The core idea is to examine past values and predict how these values will evolve as time progresses. According to the "No-Free-Lunch Theorem", there is no algorithm that performs best for all scenarios. Therefore, selecting a suitable forecasting method for a given use case is a crucial task. Simply put, each method has its benefits and drawbacks, depending on the specific use case. The choice of the forecasting method is usually based on expert knowledge, which cannot be fully automated, or on trial-and-error. In both cases, this is expensive and prone to error.
Although auto-scaling and time series forecasting are established research fields, existing approaches cannot fully address the mentioned challenges: (i) In our survey on time series forecasting, we found that publications on time series forecasting typically consider only a small set of (mostly related) methods and evaluate their performance on a small number of time series with only a few error measures while providing no information on the execution time of the studied methods. Therefore, such articles cannot be used to guide the choice of an appropriate method for a particular use case; (ii) Existing open-source hybrid forecasting methods that take advantage of at least two methods to tackle the "No-Free-Lunch Theorem" are computationally intensive, poorly automated, designed for a particular data set, or they lack a predictable time-to-result. Methods exhibiting a high variance in the time-to-result cannot be applied for time-critical scenarios (e.g., auto-scaling), while methods tailored to a specific data set introduce restrictions on the possible use cases (e.g., forecasting only annual time series); (iii) Auto-scalers typically scale an application either proactively or reactively. Even though some hybrid auto-scalers exist, they lack sophisticated solutions to combine reactive and proactive scaling. For instance, resources are only released proactively while resource allocation is entirely done in a reactive manner (inherently delayed); (iv) The majority of existing mechanisms do not take the provider's pricing scheme into account while scaling an application in a public cloud environment, which often results in excessive charged costs. Even though some cost-aware auto-scalers have been proposed, they only consider the current resource demands, neglecting their development over time. For example, resources are often shut down prematurely, even though they might be required again soon.
To address the mentioned challenges and the shortcomings of existing work, this thesis presents three contributions: (i) The first contribution-a forecasting benchmark-addresses the problem of limited comparability between existing forecasting methods; (ii) The second contribution-Telescope-provides an automated hybrid time series forecasting method addressing the challenge posed by the "No-Free-Lunch Theorem"; (iii) The third contribution-Chamulteon-provides a novel hybrid auto-scaler for coordinated scaling of applications comprising multiple services, leveraging Telescope to forecast the workload intensity as a basis for proactive resource provisioning. In the following, the three contributions of the thesis are summarized:
Contribution I - Forecasting Benchmark
To establish a level playing field for evaluating the performance of forecasting methods in a broad setting, we propose a novel benchmark that automatically evaluates and ranks forecasting methods based on their performance in a diverse set of evaluation scenarios. The benchmark comprises four different use cases, each covering 100 heterogeneous time series taken from different domains. The data set was assembled from publicly available time series and was designed to exhibit much higher diversity than existing forecasting competitions. Besides proposing a new data set, we introduce two new measures that describe different aspects of a forecast. We applied the developed benchmark to evaluate Telescope.
Contribution II - Telescope
To provide a generic forecasting method, we introduce a novel machine learning-based forecasting approach that automatically retrieves relevant information from a given time series. More precisely, Telescope automatically extracts intrinsic time series features and then decomposes the time series into components, building a forecasting model for each of them. Each component is forecast by applying a different method and then the final forecast is assembled from the forecast components by employing a regression-based machine learning algorithm. In more than 1300 hours of experiments benchmarking 15 competing methods (including approaches from Uber and Facebook) on 400 time series, Telescope outperformed all methods, exhibiting the best forecast accuracy coupled with a low and reliable time-to-result. Compared to the competing methods that exhibited, on average, a forecast error (more precisely, the symmetric mean absolute forecast error) of 29%, Telescope exhibited an error of 20% while being 2556 times faster. In particular, the methods from Uber and Facebook exhibited an error of 48% and 36%, and were 7334 and 19 times slower than Telescope, respectively.
Contribution III - Chamulteon
To enable reliable auto-scaling, we present a hybrid auto-scaler that combines proactive and reactive techniques to scale distributed cloud applications comprising multiple services in a coordinated and cost-effective manner. More precisely, proactive adaptations are planned based on forecasts of Telescope, while reactive adaptations are triggered based on actual observations of the monitored load intensity. To solve occurring conflicts between reactive and proactive adaptations, a complex conflict resolution algorithm is implemented. Moreover, when deployed in public cloud environments, Chamulteon reviews adaptations with respect to the cloud provider's pricing scheme in order to minimize the charged costs. In more than 400 hours of experiments evaluating five competing auto-scaling mechanisms in scenarios covering five different workloads, four different applications, and three different cloud environments, Chamulteon exhibited the best auto-scaling performance and reliability while at the same time reducing the charged costs. The competing methods provided insufficient resources for (on average) 31% of the experimental time; in contrast, Chamulteon cut this time to 8% and the SLO (service level objective) violations from 18% to 6% while using up to 15% less resources and reducing the charged costs by up to 45%.
The contributions of this thesis can be seen as major milestones in the domain of time series forecasting and cloud resource management. (i) This thesis is the first to present a forecasting benchmark that covers a variety of different domains with a high diversity between the analyzed time series. Based on the provided data set and the automatic evaluation procedure, the proposed benchmark contributes to enhance the comparability of forecasting methods. The benchmarking results for different forecasting methods enable the selection of the most appropriate forecasting method for a given use case. (ii) Telescope provides the first generic and fully automated time series forecasting approach that delivers both accurate and reliable forecasts while making no assumptions about the analyzed time series. Hence, it eliminates the need for expensive, time-consuming, and error-prone procedures, such as trial-and-error searches or consulting an expert. This opens up new possibilities especially in time-critical scenarios, where Telescope can provide accurate forecasts with a short and reliable time-to-result.
Although Telescope was applied for this thesis in the field of cloud computing, there is absolutely no limitation regarding the applicability of Telescope in other domains, as demonstrated in the evaluation. Moreover, Telescope, which was made available on GitHub, is already used in a number of interdisciplinary data science projects, for instance, predictive maintenance in an Industry 4.0 context, heart failure prediction in medicine, or as a component of predictive models of beehive development. (iii) In the context of cloud resource management, Chamulteon is a major milestone for increasing the trust in cloud auto-scalers. The complex resolution algorithm enables reliable and accurate scaling behavior that reduces losses caused by excessive resource allocation or SLO violations. In other words, Chamulteon provides reliable online adaptations minimizing charged costs while at the same time maximizing user experience.
A deep integration of routine care and research remains challenging in many respects. We aimed to show the feasibility of an automated transformation and transfer process feeding deeply structured data with a high level of granularity collected for a clinical prospective cohort study from our hospital information system to the study's electronic data capture system, while accounting for study-specific data and visits. We developed a system integrating all necessary software and organizational processes then used in the study. The process and key system components are described together with descriptive statistics to show its feasibility in general and to identify individual challenges in particular. Data of 2051 patients enrolled between 2014 and 2020 was transferred. We were able to automate the transfer of approximately 11 million individual data values, representing 95% of all entered study data. These were recorded in n = 314 variables (28% of all variables), with some variables being used multiple times for follow-up visits. Our validation approach allowed for constant good data quality over the course of the study. In conclusion, the automated transfer of multi-dimensional routine medical data from HIS to study databases using specific study data and visit structures is complex, yet viable.
To indicate emphasis, auxiliary do is used in affirmative contexts (do+) when no other auxiliary is present. It is thus rooted in the grammatical system of do‐support; however, do+ does not always bear stress and can fulfil various discourse‐marking functions (Nevalainen & Rissanen, 1986). Positioned at the intersection of grammar and discourse, do+ constitutes an interesting study for its use in ‘non‐native’ varieties of English since it can be assumed that the more salient grammatical functions are easier to master for learners. Focusing on Asian Englishes in contrast to Inner Circle varieties, this exploratory paper assesses the frequency and distribution of do+ in the spoken and written parts of eight ICE components.
Since the genesis of condensed matter physics, strongly correlated fermionic systems have shown a variety of fascinating properties and remain a vital topic in the field.
Such systems arise through electronic interaction, and despite decades of intensive research, no holistic approach to solving this problem has been found.
During that time, physicists have compiled a wealth of individual experimental and theoretical results, which together give an invaluable insight into these materials, and, in some instances, can explain correlated phenomena.
However, there are several systems that stubbornly refuse to fall completely in line with current theoretical descriptions, among them the high-\( T_c{}\) cuprates and heavy fermion compounds.
Although the two material classes have been around for the better part of the last 50 years, large portions of their respective phase diagram are still under intensive debate.
Recent experiments in several electron-doped cuprates compounds, e.g. neodymium cerium copper oxide (Nd\(_{2x}\)Ce\(_x\)CuO\(_4\)), reveal a charge ordering about an antiferromagnetic ground state.
So far, it has not been conclusively clarified how this intertwining of charge and spin polarization comes about and how it can be reconciled with a rigorous theoretical description.
The heavy-fermion semimetals, on the other hand, have enjoyed renewed scientific interest with the discovery of topological Kondo insulators, a new material class offering a unique interface of topology, symmetry breaking, and correlated phenomena. In this context, samarium hexaboride (SmB\(_6\)) has emerged as a prototypical system, which may feature a topological ground state.
In this thesis, we present a spin rotational invariant auxiliary particle approach to investigate the propensities of interacting electrons towards forming new states of order.
In particular, we study the onset of spin and charge order in high-\( T_c{}\) cuprate systems and Kondo lattices, as well as the interplay of magnetism and topology.
To that end, we use a sophisticated mean-field approximation of bosonic auxiliary particles augmented by a stability analysis of the saddle point via Gaussian fluctuations.
The latter enables the derivation of dynamic susceptibilities, which describe the response of the system under external fields and offer a direct comparison to experiments.
Both the mean-field and fluctuation formalisms require a numerical tool that is capable of extremizing the saddle point equations, on the one hand, and reliably solving a loop integral of the susceptibility-type, on the other.
A full, from scratch derivation of the formalism tailored towards a software implementation, is provided and pedagogically reviewed.
The auxiliary particle method allows for a rigorous description of incommensurate magnetic order and compares well to other established numerical and analytical techniques.
Within our analysis, we employ the two-dimensional one-band Hubbard as well as the periodic Anderson model as minimal Hamiltonians for the high-\( T_c{}\) cuprates and Kondo systems, respectively.
For the former, we observe a regime of intertwined charge- and spin-order in the electron-doped regime, which matches recent experimental observations in the cuprate material Nd\(_{2x}\)Ce\(_x\)CuO\(_4\).
Furthermore, we localize the emergence of a Kondo regime in the periodic Anderson model and establish the magnetic phase diagram of the two-band model for topological Kondo insulators.
The emerging antiferromagnetic ground state can be characterized by its topological properties and shows, for a non-trivial phase, topologically protected hinge modes.
Many (poly‐)phenolic natural products, for example, curcumin and taxifolin, have been studied for their activity against specific hallmarks of neurodegeneration, such as amyloid‐β 42 (Aβ42) aggregation and neuroinflammation. Due to their drawbacks, arising from poor pharmacokinetics, rapid metabolism, and even instability in aqueous medium, the biological activity of azobenzene compounds carrying a pharmacophoric catechol group, which have been designed as bioisoteres of curcumin has been examined. Molecular simulations reveal the ability of these compounds to form a hydrophobic cluster with Aβ42, which adopts different folds, affecting the propensity to populate fibril‐like conformations. Furthermore, the curcumin bioisosteres exceeded the parent compound in activity against Aβ42 aggregation inhibition, glutamate‐induced intracellular oxidative stress in HT22 cells, and neuroinflammation in microglial BV‐2 cells. The most active compound prevented apoptosis of HT22 cells at a concentration of 2.5 μm (83 % cell survival), whereas curcumin only showed very low protection at 10 μm (21 % cell survival).
The first description of neuromyelitis optica by Eugène Devic and Fernand Gault dates back to the 19th century, but only the discovery of aquaporin-4 autoantibodies in a major subset of affected patients in 2004 led to a fundamentally revised disease concept: Neuromyelits optica spectrum disorders (NMOSD) are now considered autoantibody-mediated autoimmune diseases, bringing the pivotal pathogenetic role of B cells and plasma cells into focus. Not long ago, there was no approved medication for this deleterious disease and off-label therapies were the only treatment options for affected patients. Within the last years, there has been a tremendous development of novel therapies with diverse treatment strategies: immunosuppression, B cell depletion, complement factor antagonism and interleukin-6 receptor blockage were shown to be effective and promising therapeutic interventions. This has led to the long-expected official approval of eculizumab in 2019 and inebilizumab in 2020. In this article, we review current pathogenetic concepts in NMOSD with a focus on the role of B cells and autoantibodies as major contributors to the propagation of these diseases. Lastly, by highlighting promising experimental and future treatment options, we aim to round up the current state of knowledge on the therapeutic arsenal in NMOSD.
Purpose
Inhomogeneities of the static magnetic B\(_{0}\) field are a major limiting factor in cardiac MRI at ultrahigh field (≥ 7T), as they result in signal loss and image distortions. Different magnetic susceptibilities of the myocardium and surrounding tissue in combination with cardiac motion lead to strong spatio‐temporal B\(_{0}\)‐field inhomogeneities, and their homogenization (B0 shimming) is a prerequisite. Limitations of state‐of‐the‐art shimming are described, regional B\(_{0}\) variations are measured, and a methodology for spherical harmonics shimming of the B\(_{0}\) field within the human myocardium is proposed.
Methods
The spatial B\(_{0}\)‐field distribution in the heart was analyzed as well as temporal B\(_{0}\)‐field variations in the myocardium over the cardiac cycle. Different shim region‐of‐interest selections were compared, and hardware limitations of spherical harmonics B\(_{0}\) shimming were evaluated by calibration‐based B0‐field modeling. The role of third‐order spherical harmonics terms was analyzed as well as potential benefits from cardiac phase–specific shimming.
Results
The strongest B\(_{0}\)‐field inhomogeneities were observed in localized spots within the left‐ventricular and right‐ventricular myocardium and varied between systolic and diastolic cardiac phases. An anatomy‐driven shim region‐of‐interest selection allowed for improved B\(_{0}\)‐field homogeneity compared with a standard shim region‐of‐interest cuboid. Third‐order spherical harmonics terms were demonstrated to be beneficial for shimming of these myocardial B\(_{0}\)‐field inhomogeneities. Initial results from the in vivo implementation of a potential shim strategy were obtained. Simulated cardiac phase–specific shimming was performed, and a shim term‐by‐term analysis revealed periodic variations of required currents.
Conclusion
Challenges in state‐of‐the‐art B\(_{0}\) shimming of the human heart at 7 T were described. Cardiac phase–specific shimming strategies were found to be superior to vendor‐supplied shimming.
This thesis is divided into two parts.
In the first part we contribute to a working program initiated by Pudlák (2017) who lists several major complexity theoretic conjectures relevant to proof complexity and asks for oracles that separate pairs of corresponding relativized conjectures. Among these conjectures are:
- \(\mathsf{CON}\) and \(\mathsf{SAT}\): coNP (resp., NP) does not contain complete sets that have P-optimal proof systems.
- \(\mathsf{CON}^{\mathsf{N}}\): coNP does not contain complete sets that have optimal proof systems.
- \(\mathsf{TFNP}\): there do not exist complete total polynomial search problems (also known as total NP search problems).
- \(\mathsf{DisjNP}\) and \(\mathsf{DisjCoNP}\): There do not exist complete disjoint NP pairs (coNP pairs).
- \(\mathsf{UP}\): UP does not contain complete problems.
- \(\mathsf{NP}\cap\mathsf{coNP}\): \(\mathrm{NP}\cap\mathrm{coNP}\) does not contain complete problems.
- \(\mathrm{P}\ne\mathrm{NP}\).
We construct several of the oracles that Pudlák asks for.
In the second part we investigate the computational complexity of balance problems for \(\{-,\cdot\}\)-circuits computing finite sets of natural numbers (note that \(-\) denotes the set difference). These problems naturally build on problems for integer expressions and integer circuits studied by Stockmeyer and Meyer (1973), McKenzie and Wagner (2007), and Glaßer et al. (2010).
Our work shows that the balance problem for \(\{-,\cdot\}\)-circuits is undecidable which is the first natural problem for integer circuits or related constraint satisfaction problems that admits only one arithmetic operation and is proven to be undecidable.
Starting from this result we precisely characterize the complexity of balance problems for proper subsets of \(\{-,\cdot\}\). These problems turn out to be complete for one of the classes L, NL, and NP.
Locator\(^®\) and ball attachments are well-established systems to attach overdentures to two inter-foraminal implants. This study aimed to evaluate differences between the two systems regarding prosthetic maintenance and patients’ oral-health-related quality of life (OHRQoL). Dental records of patients with a mandibular implant-retained overdenture were retrospectively analyzed. Prosthetic maintenance measures involving the denture suprastructure and attachment matrix and patrix were analyzed. Furthermore, the Oral Health Impact Profile-G14 (OHIP-G14) was used to evaluate OHRQoL. Results were analyzed by means of Kaplan–Meier analysis and Student’s t- and log-rank tests. The records of 122 patients were evaluated. Kaplan–Meier survival analysis revealed a significant difference between ball attachments (Group B; n patients = 47) and Locator\(^®\) attachments (Group L; n patients = 75) regarding the occurrence of denture fractures (p < 0.001) and events affecting the matrix (p = 0.028) and patrix (p = 0.030). Group L had a significantly lower total OHIP-G14 score than Group B (p = 0.002). The most common maintenance events were matrix-related and denture relining for both attachment systems. Group B required more maintenance measures than Group L. Moreover, patients in Group L had better OHRQoL than patients in Group B.
Catalytic C−X borylation of aryl halides containing two ortho‐fluorines has been found to be challenging, as most previous methods require stoichiometric amounts of base and the polyfluorinated aryl boronates suffer from protodeboronation, which is accelerated by ortho‐fluorine substituents. Herein, we report that a combination of Pd(dba)2 (dba=dibenzylideneacetone) with SPhos (2‐dicyclohexylphosphino‐2’,6’‐dimethoxybiphenyl) as a ligand is efficient to catalyze the C‐Cl borylation of aryl chlorides containing two ortho‐fluorine substituents. This method, conducted under base‐free conditions, is compatible with the resulting di‐ortho‐fluorinated aryl boronate products which are sensitive to base.
A basic mental model (BMM—in German ‘Grundvorstellung’) of a mathematical concept is a content-related interpretation that gives meaning to this concept. This paper defines normative and individual BMMs and concretizes them using the integral as an example. Four BMMs are developed about the concept of definite integral, sometimes used in specific teaching approaches: the BMMs of area, reconstruction, average, and accumulation. Based on theoretical work, in this paper we ask how these BMMs could be identified empirically. A test instrument was developed, piloted, validated and applied with 428 students in first-year mathematics courses. The test results show that the four normative BMMs of the integral can be detected and separated empirically. Moreover, the results allow a comparison of the existing individual BMMs and the requested normative BMMs. Consequences for future developments are discussed.
In dieser Dissertation wird der MEK5/ERK5- Signalweg als möglicher Angriffspunkt in der zielgerichteten Melanomtherapie identifiziert. Die Adressierung von ERK5 bietet eine Alternative, um einer Resistenzentwicklung gegenüber Inhibitoren des MAPK- Signalwegs entgegenzuwirken. Das maligne Melanom ist ein hochaggressiver Tumor mit steigender Inzidenz. Zunehmende Sonnenstunden im Rahmen des Klimawandels mit erhöhter Belastung der Haut durch UV-Strahlung werden die Problematik des malignen Melanoms für den Menschen in den nächsten Jahren weiter zunehmen lassen.
Die Aktivierung des MEK5/ERK5- Signalwegs scheint eine Reaktion von Tumorzellen auf Therapiestress zu sein. Diese Aktivierung liefert den Melanomzellen einen Überlebensvorteil und verhindert ein langfristiges Therapieansprechen. ERK5 beeinflusst den Zellzyklus von Melanomzellen und ist somit möglicherweise von wichtiger Bedeutung in der Tumorgenese des malignen Melanoms.
Patienten mit NRAS- Mutation profitieren auffallend weniger von einer gezielten MEKi-Therapie als solche mit BRAF Mutation. Für ersteres Patientenkollektiv steht aktuell lediglich die Immuntherapie zur Verfügung, wodurch oft nur ein kurzes, progressionsfreies Intervall erreicht werden kann und die Patienten häufig unter schweren Nebenwirkungen leiden. Grund für die problematische Behandlung könnte das häufige Auftreten einer basalen ERK5- Aktivierung in NRAS- mutierten Melanomen sein. Diese Arbeit liefert eine positive Prognose über den Nutzen einer ERK5- Inhibition als Erweiterung des Therapieschemas. Diese These gilt auch für Melanompatienten mit einer BRAF- Mutation. Patienten, die an einem malignen Melanom erkrankt sind, weisen zu 80% eine Mutation in einem dieser beschriebenen Onkogene auf. Die Arbeit lässt darauf schließen, dass eine ERK5- Inhibition in der Therapie von beiden Gruppen erfolgreich sein könnte und somit das Leben nahezu aller Melanompatienten betrifft.
The term ‘urban beekeeping’ connotes a host of meanings—sociopolitical, commercial, ecological and personal—beyond the mere description of where bees and beekeepers happen to coincide. Yet, these meanings are seldom articulated explicitly or brought into critical engagement with the relevant fields of urban ecology and political ecology.
Beginning with a brief account of the history of urban beekeeping in the United States, we draw upon urban ecological theory to construct a conceptual model of urban beekeeping that distinguishes beekeeping in, of and for the city. In our model, beekeeping in the city describes the mere importation of the traditionally rural practice of beekeeping into urban spaces for the private reasons of the individual beekeeper, whereas beekeeping of the city describes beekeeping that is consciously tailored to the urban context, often accompanied by (semi)professionalization of beekeepers and the formation of local expert communities (i.e. beekeeping associations). Beekeeping for the city describes a shift in mindset in which beekeeping is directed to civic ends beyond the boundaries of the beekeeping community per se.
Using this framework, we identify and discuss specific socioecological assets and liabilities of urban beekeeping, and how these relate to beekeeping in, of and for the city. We then formulate actionable guidelines for maturing the practice of urban beekeeping into a beneficent and self‐critical form of urban ecological citizenship; these include fostering self‐regulation within the beekeeping community, harnessing beekeeping as a ‘gateway’ experience for a broader rapprochement between urban residents and nature, and recognizing the political‐ecological context of beekeeping with respect to matters of socioecological justice.
The design and evaluation of assisting technologies to support behavior change processes have become an essential topic within the field of human-computer interaction research in general and the field of immersive intervention technologies in particular. The mechanisms and success of behavior change techniques and interventions are broadly investigated in the field of psychology. However, it is not always easy to adapt these psychological findings to the context of immersive technologies. The lack of theoretical foundation also leads to a lack of explanation as to why and how immersive interventions support behavior change processes. The Behavioral Framework for immersive Technologies (BehaveFIT) addresses this lack by 1) presenting an intelligible categorization and condensation of psychological barriers and immersive features, by 2) suggesting a mapping that shows why and how immersive technologies can help to overcome barriers and finally by 3) proposing a generic prediction path that enables a structured, theory-based approach to the development and evaluation of immersive interventions. These three steps explain how BehaveFIT can be used, and include guiding questions for each step. Further, two use cases illustrate the usage of BehaveFIT. Thus, the present paper contributes to guidance for immersive intervention design and evaluation, showing that immersive interventions support behavior change processes and explain and predict 'why' and 'how' immersive interventions can bridge the intention-behavior-gap.
Stationäre Gasturbinen können von großer Bedeutung für die Verlangsamung des Klima-wandels und bei der Bewältigung der Energiewende sein. Für die Weiterentwicklung von Gasturbinen zu höheren Betriebstemperaturen und damit einhergehend zu höheren Wirkungs-graden werden berührungslose Messverfahren zur Ermittlung der Oberflächentemperatur von Turbinenschaufeln und der Gastemperatur der heißen Verbrennungsgase während des Be-triebs benötigt. Im Rahmen dieser Arbeit werden daher Methoden der berührungslosen Tem-peraturmessung unter Verwendung von Infrarotstrahlung untersucht.
Die berührungslose Messung der Oberflächentemperatur moderner Turbinenschaufeln muss aufgrund derer infrarot-optischer Oberflächeneigenschaften im Wellenlängenbereich des mitt-leren Infrarots durchgeführt werden, in welchem die Turbinenbrenngase starke Absorptions-banden aufweisen. Zur Entwicklung eines adäquaten Strahlungsthermometers für diesen Zweck wurden im Rahmen dieser Arbeit daher durch Ermittlung von Transmissionsspektren von Kohlenstoffdioxid und Wasserdampf bei hohen Temperaturen und Drücken in einer ei-gens hierfür konstruierten Heißgas-Messzelle zunächst Wellenlängenbereiche identifiziert, in welchen die geplanten Messungen möglich sind. Anschließend wurde der Prototyp eines ent-sprechend konfigurierten Strahlungsthermometers im Zuge des Testlaufes einer vollskaligen Gasturbine erfolgreich erprobt.
Weiterhin wurden im Rahmen dieser Arbeit zwei mögliche Verfahren zur berührungslosen Gastemperaturmessung untersucht. Das erste untersuchte Verfahren setzt ebenfalls auf Strah-lungsthermometrie. Dieses Verfahren sieht vor, aufgrund der Temperaturabhängigkeit des spektralen Transmissionsgrades in den Randbereichen von gesättigten Absorptionsbanden von Gasen aus der in diesen Bereichen transmittierten spektralen Strahldichte auf die Gastempera-tur zu schließen. Im Rahmen dieser Arbeit wurden Voruntersuchungen für dieses Tempera-turmessverfahren durchgeführt. So konnten auf der Grundlage von experimentell ermittelten Transmissionsspektren von Kohlenstoffdioxid bei Drücken zwischen 5 kPa und 600 kPa und Gastemperaturen zwischen Raumtemperatur und 1073 K für das geplante Verfahren nutzbare Wellenlängenintervalle insbesondere im Bereich der Kohlenstoffdioxid-Bande bei 4,26 µm identifiziert werden.
Das zweite im Rahmen dieser Arbeit untersuchte Verfahren zur berührungslosen Gastem-peraturmessung basiert auf der Temperaturabhängigkeit der Wellenlängenposition der Trans-missionsminima der Absorptionsbanden von infrarot-aktiven Gasen. Im Hinblick darauf wur-de dieses Phänomen anhand von experimentell bestimmten hochaufgelösten Transmissions-spektren von Kohlenstoffdioxid überprüft. Weiterhin wurden mögliche Wellenlängenbereiche identifiziert und hinsichtlich ihrer Eignung für das geplante Verfahren charakterisiert. Als am vielversprechendsten erwiesen sich hierbei Teilbanden in den Bereichen um 2,7 µm und um 9,2 µm. Unter Beimischung von Stickstoff mit Partialdrücken von bis zu 390 kPa erwies sich zudem auch die Bande bei 4,26 µm als geeignet.
Die im Rahmen dieser Arbeit experimentell ermittelten Transmissionsspektren konnten dar-über hinaus schließlich durch Vergleich mit entsprechenden HITRAN-Simulationen verifiziert werden.
Bei den primär herzgesunden Tieren wurde durch Frequenz-Überstimulation mit Hilfe eines implantierten biventrikulären Herzschrittmachers eine chronische Herzinsuffizienz induziert. Im Rahmen der Verlaufsbeobachtungen wurde in-vivo die Druckanstiegsgeschwindigkeit dP/dtmax, der enddiastolische sowie endsystolische Druck durch einen implantierten Drucksensor gemessen. Anhand der gemessen dP/dtmax-, EDP- und ESP-Werte konnte der Bowditcheffekt dargestellt werden. Mit Ausprägung einer chronischen Herzinsuffizienz fiel dieser im Verlauf deutlich geringer aus, blieb aber stets nachweisbar.
Bestimmung der Plasmaproteinbindung von niedrig affinen Liganden am Beispiel der Ephedra-Alkaloide
(2021)
Zur Bestimmung der Bindungsaffinität von Liganden zu den Plasmaproteinen, insbesondere Albumin, wurden über die Jahre zahlreiche Methoden entwickelt. Die Grundlage dieser Arbeit war die Bestimmung der Plasmaproteinbindung der Ephedra-Alkaloide unter Verwendung einzelner dieser etablierten Methoden. Aufgrund ihres Anwendungsgebiets als Notfallmedikation bei Anästhesie-bedingter Hypotonie und den damit verbundenen Anforderungen an die Pharmakokinetik, sollten die Ephedra-Alkaloide niedrig-affine Liganden der Plasmaproteine darstellen. In der Literatur und in vorhergehenden Arbeiten wurden für die Ephedra-Alkaloide jedoch sehr unterschiedliche, teilweise der Indikation widersprechende Affinitäten bestimmt. Daher sollte im Rahmen dieser Arbeit das Ausmaß der Plasmaproteinbindung der Ephedra-Alkaloide weiter untersucht und die Affinität zu Albumin bzw. anderen Plasmaproteinen im humanen Serum bestimmt werden. Neben der Affinität sollte auch die Stereoselektivität der Bindung genauer betrachtet werden, die bei der Bindung vieler Wirkstoffe eine Rolle spielt. Als Referenzmethode diente die kontinuierliche Ultrafiltration, die auch schon bei Hörst verwendet wurde.
Folgende Schlussfolgerungen konnten aus den Ergebnissen dieser Arbeit gezogen werden:
1) Die Ergebnisse der kontinuierlichen Ultrafiltration zeigten, dass die Ephedra-Alkaloide, Ephedrin und Pseudoephedrin, ein nur geringes Ausmaß an Plasmaprotein-bindung von 4 – 9 % gegenüber bovinem und humanem Serumalbumin zeigen. Eine deutlich höhere Plasmaproteinbindung von 19 – 37 % konnte hingegen bei der Verwendung von humanem Serum bestimmt werden. Die Affinität von Pseudoephedrin war dabei jeweils geringer als die von Ephedrin.
2) Diese Ergebnisse mit humanem Serum und die Tatsache, dass Albumin vorwiegend saure Stoffe bindet, legen nahe, dass die Ephedra-Alkaloide vermehrt an andere Plasmaproteine in Serum binden. Erste Messergebnisse mit saurem α1 Glykoprotein bestätigen diese Vermutung.
3) Eine Stereoselektivität konnte nur in geringem Maß bei (+) Ephedrin beobachtet werden, wobei der Unterschied nur im Serum signifikant ist. Pseudoephedrin dagegen zeigte keinerlei Stereoselektivität. Diese Beobachtung passt zu den Schlussfolgerungen der Pfeiffer‘schen Regel zur Stereoselektivität einer Bindung.
4) Andere Sympathomimetika mit einer zusätzlichen Phenolgruppe im Molekül zeigen eine ähnlich niedrige Affinität zu Albumin von ca. 10 %. Eine zusätzliche Phenolgruppe scheint die sauren Eigenschaften des Liganden nicht ausreichend zu erhöhen, um die Affinität zu Albumin signifikant zu steigern.
5) Das tertiäre Kohlenstoffatom am Stickstoff des Ephedrins scheint in gewisser Weise an der Bindung zu Albumin beteiligt zu sein. Sympathomimetika mit einer zusätzlichen Methylgruppe an diesem Kohlenstoffatom, wie Ephedrin, Pseudoephedrin und Oxilofrin, zeigen eine größere Streuung der Messergebnisse. Eine zusätzliche Methylgruppe in dieser Position scheint die Bindung daher sterisch zu hindern.
6) Die Ergebnisse der diskontinuierlichen Ultrafiltration bestätigen weitestgehend die Ergebnisse der kontinuierlichen Ultrafiltration
7) Eine Bestimmung des Ausmaßes der Plasmaproteinbindung von niedrig-affinen Stoffen ist mit den anderen orthogonalen Methoden ACE, NMR und iTC nicht möglich. Diese drei verwendeten Methoden trennen nicht wie die klassischen Methoden den gebundenen vom ungebundenen Wirkstoff, sondern beruhen auf einer Veränderung bestimmter Messparameter: bei der ACE die Migrationszeit, bei der NMR-Spektroskopie die chemische Verschiebung der Signale bzw. der Diffusionskoeffizient und bei der iTC die frei werdende Bindungswärme. Bei allen drei Methoden war die Änderung der Messgröße aufgrund der niedrigen Plasmaproteinbindung zu gering, um auswertbar zu sein.
8) Eine Störgröße bei die orthogonalen Methoden war vielfach auch das Albumin selbst bzw. dessen Eigenschaften. Bei der Affinitäts-Kapillarelektrophorese sind physiologische HSA-Konzentrationen wegen des starken Basislinienrauschens nicht messbar. Zudem bewirkt der Albuminzusatz im Trennpuffer eine Viskositätsänderung, die den EOF verlangsamt und so die Messung stört. Bei der NMR-Spektroskopie können wegen der Überlagerung der Signale durch die breiten Albuminbanden weder Veränderungen in der chemischen Verschiebung noch des Diffusionskoeffizienten zuverlässig bestimmt werden. In der iTC erschwerte die Schaumbildung der Lösung, die durch die Oberflächenaktivität des Albumins verursacht wird, die Messung.
In dieser Arbeit konnte somit das Ausmaß der Plasmaproteinbindung der Ephedra-Alkaloide mit verschiedenen Methoden erfolgreich bestimmt werden. Damit bestätigte diese Arbeit, dass die Ephedra-Alkaloide, wie deren Indikation vermuten lässt, zu den niedrig affinen Liganden des Albumins zählen. Um genauer eingrenzen zu können durch welche Plasmaproteine im Blutserum die Ephedra-Alkaloide transportiert werden, sollten die Untersuchungen zum sauren α1-Glykoprotein fortgesetzt und gegebenenfalls durch weitere Bestimmungen mit anderen Plasmaproteinen ergänzt werden.
Die Ergebnisse dieser Arbeit haben auch gezeigt, dass viele der unzähligen Methoden zur Untersuchung der Plasmaproteinbindung bei der Bestimmung von niedrig affinen Liganden ihre Grenzen haben. Nach wie vor sind zur Bestimmung einer niedrigen Bindungsaffinität weiterhin die klassischen Methoden, wie die kontinuierliche Ultrafiltration, Mittel der Wahl. Nicht zuletzt deshalb erfreuen sich diese Methoden auch heute noch großer Beliebtheit.
Bestimmung der Prävalenz medikamentenresistenter HIV-Infektionen bei therapienaiven Patienten in der Viktoriasee-Region in Tansania
Seitdem HIV im Jahr 1983 als Ursache des „acquired immundeficiency syndrome“ (AIDS) isoliert wurde, hat sich viel in der Therapie dieser Infektion getan. Trotzdem handelt es sich um eine Erkrankung, welche bisher nicht geheilt werden kann. Da der weitaus größere Anteil der betroffenen Menschen in strukturschwachen Ländern lebt, ist die größte Herausforderung, eine flächendeckende Therapie weltweit zu etablieren und diese für jeden zugänglich zu machen.
Aufgrund der hohen Mutationsrate des HI-Virus, kommt es zur schnellen Resistenzentwicklung. In strukturschwachen Ländern wie Tansania ist eine Resistenztestung vor Therapiebeginn aktuell aufgrund fehlender Infrastruktur sowie geringer finanzieller Mittel nicht denkbar. Deshalb wird nach WHO-Empfehlung eine standardisierte Dreifachkombination, in der Regel Tenofovir, Lamivudin und Efavirenz, angewendet, ohne vorher eine Resistenztestung vorzunehmen. In regelmäßigen Nachuntersuchungen wird anhand von Viruslast und CD4-Zahl der Erfolg der begonnenen Therapie gemessen und nur bei einem Versagen dieser eine Umstellung vorgenommen.
Bereits im Jahr 2011 wurde von unserer Arbeitsgruppe (Kasang, Kalluvya et al.) nachgewiesen, dass eine deutlich höhere Prävalenz für Primärresistenzen von HI-Viren gegenüber antiretroviraler Therapie bestand, als zuvor angenommen. Betrachtet wurden dabei alle Patienten, welche neu als HIV-positiv getestet wurden und nun therapiert werden sollten. Neu war, dass auch ältere Patienten (>25 Jahre) mit einbezogen wurden. Aufgrund der hohen Prävalenz an Primärresistenzen (19%) nahm man an, dass durch antiretrovirale Therapie entstandene resistente Viren zwischen Partnern direkt übertragen werden können.
In der vorliegenden Arbeit sollte durch die Untersuchung einer größeren Patientengruppe dieser These nachgegangen werden. Untersucht wurde das Plasma von 114 Patienten (> 25 Jahre), welche unmittelbar vor dem Start einer antiretroviralen Therapie standen und bisher therapienaiv waren. Zur Bestimmung von möglicherweise vorliegenden Resistenzen erfolgte im S3-Labor zunächst die Isolierung der Virus-RNA aus dem Plasma. Diese wurde anschließend in DNA umschrieben, amplifiziert, aufgereinigt und sequenziert. Die Sequenzen wurden online durch die „HIV DRUG RESISTANCE DATABASE“ der Stanford University im Hinblick auf den Subtyp der reversen Transkriptase (RT), der Protease sowie auf Resistenzen gegenüber den gängigen aniretroviralen Medikamenten analysiert mit folgenden Ergebnissen:
1. Die Prävalenz für eine Primärresistenz gegenüber antiretroviralen Medikamenten betrug 21,5 %
2. Die Medikamente der Triple-Therapie waren in der untersuchten Gruppe mit einer Prävalenz von 10,53 % betroffen.
3. Diese Ergebnisse sind besorgniserregend und bestätigen die von Kasang, Kalluvya et al. aufgestellte These
Für den weitaus größeren Teil der untersuchten Patienten wäre jedoch die Triple-Therapie ohne kostspielige und aufwendige Resistenztestung ausreichend gewesen. Vorderstes Ziel bleibt somit die finanziellen Ressourcen weiterhin Zugänglichkeit der medikamentösen Behandlung zu nutzen, da dies die beste Methode ist, die Ausbreitung dieser Pandemie einzudämmen. Dennoch werden in den nächsten Jahren weiterhin Untersuchungen mit noch größeren Patientenzahlen nötig sein, um die Wirksamkeit des aktuellen Therapieregimes ständig zu überprüfen und gegebenenfalls eine Anpassung vorzunehmen.
Computer games are highly immersive, engaging, and motivating learning environments. By providing a tutorial at the start of a new game, players learn the basics of the game's underlying principles as well as practice how to successfully play the game. During the actual gameplay, players repetitively apply this knowledge, thus improving it due to repetition. Computer games also challenge players with a constant stream of new challenges which increase in difficulty over time. As a result, computer games even require players to transfer their knowledge to master these new challenges. A computer game consists of several game mechanics. Game mechanics are the rules of a computer game and encode the game's underlying principles. They create the virtual environments, generate a game's challenges and allow players to interact with the game. Game mechanics also can encode real world knowledge. This knowledge may be acquired by players via gameplay. However, the actual process of knowledge encoding and knowledge learning using game mechanics has not been thoroughly defined, yet. This thesis therefore proposes a theoretical model to define the knowledge learning using game mechanics: the Gamified Knowledge Encoding. The model is applied to design a serious game for affine transformations, i.e., GEtiT, and to predict the learning outcome of playing a computer game that encodes orbital mechanics in its game mechanics, i.e., Kerbal Space Program. To assess the effects of different visualization technologies on the overall learning outcome, GEtiT visualizes the gameplay in desktop-3D and immersive virtual reality. The model's applicability for effective game design as well as GEtiT's overall design are evaluated in a usability study. The learning outcome of playing GEtiT and Kerbal Space Program is assessed in four additional user studies. The studies' results validate the use of the Gamified Knowledge Encoding for the purpose of developing effective serious games and to predict the learning outcome of existing serious games. GEtiT and Kerbal Space Program yield a similar training effect but a higher motivation to tackle the assignments in comparison to a traditional learning method. In conclusion, this thesis expands the understanding of using game mechanics for an effective learning of knowledge. The presented results are of high importance for researches, educators, and developers as they also provide guidelines for the development of effective serious games.
In human interactions, the facial expression of a bargaining partner may contain relevant information that affects prosocial decisions. We were interested in whether facial expressions of the recipient in the dictator game influence dictators´ ehavior. To test this, we conducted an online study (n = 106) based on a modified version of a dictator game. The dictators allocated money between themselves and another person (recipient), who had no possibility to respond to the dictator.
Importantly, before the allocation decision, the dictator was presented with the facial expression of the recipient (angry, disgusted, sad, smiling, or neutral). The results showed that dictators sent more money to recipients with sad or smiling facial expressions and less to recipients with angry or disgusted facial expressions compared with a neutral facial expression. Moreover, based on the sequential analysis of the decision and the interaction partner in the preceding trial, we found that decision-making depends upon previous interactions.
Distributed learning is often recommended as a general learning strategy, but previous research has established its benefits mainly for learning with repeated materials. In two experiments, we investigated distributed learning with complementary text materials. 77 (Experiment 1) and 130 (Experiment 2) seventh graders read two texts, massed vs. distributed, by 1 week (Experiment 1) or 15 min (Experiment 2). Learning outcomes were measured immediately and 1 week later and metacognitive judgments of learning were assessed. In Experiment 1, distributed learning was perceived as more difficult than massed learning. In both experiments, massed learning led to better outcomes immediately after learning but learning outcomes were lower after 1 week. No such decrease occurred for distributed learning, yielding similar outcomes for massed and distributed learning after 1 week. In sum, no benefits of distributed learning vs. massed learning were found, but distributed learning might lower the decrease in learning outcomes over time.
Within the relatively new area of research on Third Language (L3) Acquisition, the subfield of phonology is growing, but still relatively understudied. Testing the current L3 models adopted from research on L3 syntax (see Rothman 2010, Bardel & Falk 2012, Flynn et al. 2004), the studies conducted in the area have mostly focused on the source and directionality of language transfer – both into the L3 and into the respective background languages – with some recent excursions into the role of extra-linguistic factors for multilingual learners (e.g., Wrembel 2015). The findings so far (mostly on production, with perception lagging behind) have been very diverse and, depending on the concrete study, can often be taken to give evidence for any of the prevalent models. This can be attributed to the wide range of different speaker and learner biographies as well as their language combinations and state of acquisition, but crucially the dilemma seems to be inherent in the (phonological) system in and of itself since viewing phonological interlanguage transfer as a one-dimensional and immediately transparent process based on direct correspondences between language systems does not seem to capture the complex nature of the phenomenon.
In this doctoral thesis I investigate the acquisition of an additional phonological system by child and adult German heritage speakers of Turkish. Specifically, I explore how the learners deal with diverse phonological contrasts that promote positive contra negative transfer from their HL (Turkish) and their L2 (German), and how their perception and production is modulated by cognitive and affective variables. Moreover, I test contrasts that can be found neither in the HL nor in the L2 phonological system.
The studies will shed light both on the question of how a new language is shaped and affected by different existing systems and on how two or more phonological grammars co-exist and/or interact in a speaker’s mind. I will argue that, rather than being regarded as simple full projection of language-specific property sets onto the target language, phonological transfer in multilinguals needs to be considered as a process of complex interactions and layers that are established on the level of individual phonological properties and abstract (typological) associations.
Background: In most trypanosomes, endo and exocytosis only occur at a unique organelle called the flagellar pocket (FP) and the flagellum exits the cell via the FP. Investigations of essential cytoskeleton-associated structures located at this site have revealed a number of essential proteins. The protein TbBILBO1 is located at the neck of the FP in a structure called the flagellar pocket collar (FPC) and is essential for biogenesis of the FPC and parasite survival. TbMORN1 is a protein that is present on a closely linked structure called the hook complex (HC) and is located anterior to and overlapping the collar. TbMORN1 is essential in the bloodstream form of T. brucei. We now describe the location and function of BHALIN, an essential, new FPC-HC protein. Methodology/Principal Findings: Here, we show that a newly characterised protein, BHALIN (BILBO1 Hook Associated LINker protein), is localised to both the FPC and HC and has a TbBILBO1 binding domain, which was confirmed in vitro. Knockdown of BHALIN by RNAi in the bloodstream form parasites led to cell death, indicating an essential role in cell viability. Conclusions/Significance: Our results demonstrate the essential role of a newly characterised hook complex protein, BHALIN, that influences flagellar pocket organisation and function in bloodstream form T. brucei parasites.
Bildgebende Zweifarben-Einzelmolekül-PET-Fluoreszenzspektroskopie am molekularen Chaperon Hsp90
(2021)
Im Forschungsfeld der Proteindynamik häufen sich in den letzten Jahren Untersuchungen an einzelnen Molekülen. Damit können molekulare Ereignisse, die in konventioneller Spektroskopie durch stochastische Prozesse unentdeckt bleiben, durch direkte Beobachtung identifiziert und analysiert werden, was zu tieferem mechanistischem Verständnis des untersuchten Systems beitragen kann.
Die Implikation des molekularen Chaperons Hsp90 in die korrekte Faltung und Aktivierung einer Vielzahl davon abhängiger Klientenproteine machen es zu einem zentralen Knotenpunkt der zellulären Proteinhomöostase, allerdings ist der Mechanismus seiner breiten Klientenerkennung und -prozessierung bisher nur lückenhaft untersucht. Mit der Erkenntnis, dass Hsp90 ATP abhängig große, ratenlimitierende Umstrukturierungen erfährt, wurden Reportersysteme entwickelt, die auf dem Förster-Resonanzenergietransfer mit einer räumlichen Auflösung von ca. 2-10 nm basieren. Diese dokumentieren einen Klammerschluss des Chaperons und prognostizieren einen intermediatbbasierten Konformations-Zyklus. Details über den Mechanismus der Umstrukturierungen wurden mit der Entwicklung von Reportersystemen ermittelt, die auf dem photoinduzierten Elektronentransfer zwischen der Aminosäure Tryptophan und einem organischen Farbstoff basieren. Die Technik beruht auf kontaktinduzierter Fluoreszenzlöschung und damit verbundenen digitalen Intensitätsübergängen, dabei ermöglicht die räumliche Sensitivität von < 1 nm die Beobachtung von lokalen Umstrukturierungen. In Hsp90 wurden damit mittels konventioneller Spektroskopie drei kritische lokale Umlagerungen untersucht und daraus ein Modell mit heterogenen apo-Konformationen sowie ein kooperativer Konformationszyklus abgeleitet, der dem intermediatbasierten Modell gegenübersteht.
Im Rahmen dieser Dissertation wurde anhand des Hsp90-Chaperons eine Methode entwickelt, die eine bildgebende PET Fluoreszenzspektroskopie von mehreren Umstrukturierungen gleichzeitig an einzelnen Molekülen erlaubt. Ein umfangreiches Farbstoffscreening führte zur Identifizierung eines Farbstoffpaars, das die PET-basierte simultane Aufzeichnung zweier Konformations-Koordinaten ermöglicht. Über verschiedene Modifikationen des Chaperons konnten einzelmolekültaugliche Oberflächen hergestellt werden, auf denen zweifach markierte Hsp90-Proteine immobilisiert sind. Fluoreszenzintensitätszeitspuren einzelner Chaperone und entsprechende Kontrollkonstrukte bestätigen qualitativ den Erfolg der Methode, für die quantitative Analyse wurde eine Routine in der Programmiersprache Python entwickelt, mit welcher kinetische Informationen ermittelt werden konnten.
Diese legen eine enge wechselseitige Abhängigkeit der drei lokalen Elemente nahe, wobei der Großteil der Konformationsübergänge zweier simultan aufgezeichneter Umstrukturierungen Synchronität innerhalb von zwei Sekunden zeigt. Im Vergleich zur Hydrolyse von einem ATP in mehreren Minuten deutet das auf eine enge Kopplung hin. Weiter konnte eine Beschleunigung der Dynamiken durch aromatische Modifikation des N-Terminus von Hsp90 beobachtet werden, zudem erlaubt der Einzelmolekülansatz die Verwendung des nativen Nukleotids ATP, wodurch auch die lokalen Öffnungsdynamiken zugänglich werden. Die zur Bestimmung der Zeitkonstanten durchgeführte Analyse unterstützt die Ansicht heterogener apo-Zustände und einer einheitlich geschlossenen Konformation.
Die bildgebende Zweifarben-Einzelmolekül-PET-Spektroskopie konnte insgesamt zu einem Komplement der Einzelmolekül-FRET-Spektroskopie entwickelt werden, um damit lokale Konformationsdynamiken zu untersuchen. Der bildgebende Ansatz erlaubt eine einfache Implementierung in einen experimentellen Einzelmolekül-FRET Aufbau bei gleichzeitiger Erweiterung der beobachteten Koordinaten und wird so zu einem breit anwendbaren Werkzeug multidimensionaler Dynamikuntersuchungen einzelner Proteine.
(1) Background: During maturation of the Hepatitis B virus, a viral polymerase inside the capsid transcribes a pre-genomic RNA into a partly double stranded DNA-genome. This is followed by envelopment with surface proteins inserted into a membrane. Envelopment is hypothetically regulated by a structural signal that reports the maturation state of the genome. NMR data suggest that such a signal can be mimicked by the binding of the detergent Triton X 100 to hydrophobic pockets in the capsid spikes. (2) Methods: We have used electron cryo-microscopy and image processing to elucidate the structural changes that are concomitant with the binding of Triton X 100. (3) Results: Our maps show that Triton X 100 binds with its hydrophobic head group inside the pocket. The hydrophilic tail delineates the outside of the spike and is coordinated via Lys-96. The binding of Triton X 100 changes the rotamer conformation of Phe-97 in helix 4, which enables a π-stacking interaction with Trp-62 in helix 3. Similar changes occur in mutants with low secretion phenotypes (P5T and L60V) and in a mutant with a pre-mature secretion phenotype (F97L). (4) Conclusion: Binding of Triton X 100 is unlikely to mimic structural maturation because mutants with different secretion phenotypes show similar structural responses.
The Myb-MuvB (MMB) complex plays an essential role in the time-dependent transcriptional activation of mitotic genes. Recently, our laboratory identified a novel crosstalk between the MMB-complex and YAP, the transcriptional coactivator of the Hippo pathway, to coregulate a subset of mitotic genes (Pattschull et al., 2019). Several genetic studies have shown that the Hippo-YAP pathway is essential to drive cardiomyocyte proliferation during cardiac development (von Gise et al., 2012; Heallen et al., 2011; Xin et al., 2011). However, the exact mechanisms of how YAP activates proliferation of cardiomyocytes is not known. This doctoral thesis addresses the physiological role of the MMB-Hippo crosstalk within the heart and characterizes the YAP-B-MYB interaction with the overall aim to identify a potent inhibitor of YAP.
The results reported in this thesis indicate that complete loss of the MMB scaffold protein LIN9 in heart progenitor cells results in thinning of ventricular walls, reduced cardiomyocyte proliferation and early embryonic lethality. Moreover, genetic experiments using mice deficient in SAV1, a core component of the Hippo pathway, and LIN9-deficient mice revealed that the correct function of the MMB complex is critical for proliferation of cardiomyocytes due to Hippo-deficiency. Whole genome transcriptome profiling as well as genome wide binding studies identified a subset of Hippo-regulated cell cycle genes as direct targets of MMB. By proximity ligation assay (PLA), YAP and B-MYB were discovered to interact in embryonal cardiomyocytes. Biochemical approaches, such as co-immunoprecipitation assays, GST-pulldown assays, and µSPOT-based peptide arrays were employed to characterize the YAP-B-MYB interaction. Here, a PY motif within the N-terminus of B-MYB was found to directly interact with the YAP WW-domains. Consequently, the YAP WW-domains were important for the ability of YAP to drive proliferation in cardiomyocytes and to activate MMB target genes in differentiated C2C12 cells. The biochemical information obtained from the interaction studies was utilized to develop a novel competitive inhibitor of YAP called MY-COMP (Myb-YAP competition). In MY-COMP, the protein fragment of B-MYB containing the YAP binding domain is fused to a nuclear localization signal. Co-immunoprecipitation studies as well as PLA revealed that the YAP-B-MYB interaction is robustly blocked by expression of MY-COMP. Adenoviral overexpression of MY-COMP in embryonal cardiomyocytes suppressed entry into mitosis and blocked the pro-proliferative function of YAP. Strikingly, characterization of the cellular phenotype showed that ectopic expression of MY-COMP led to growth defects, nuclear abnormalities and polyploidization in HeLa cells.
Taken together, the results of this thesis reveal the mechanism of the crosstalk between the Hippo signaling pathway and the MMB complex in the heart and form the basis for interference with the oncogenic activity of the Hippo coactivator YAP.
Cyclisches Adenosinmonophosphat ist ein ubiquitärer zweiter Botenstoff zahlreicher Signalwege im menschlichen Körper. Auf eine Vielzahl verschiedenster extrazellulärer Signale folgt jedoch eine Erhöhung desselben intrazellulären Botenstoffs - cAMP. Nichtsdestotrotz schafft es die Zelle, Signalspezifität aufrecht zu erhalten. Ein anerkanntes, wenn auch bisher unverstandenes Modell, um dieses zu ermöglichen, ist das Prinzip der Kompartimentierung. Die Zelle besitzt demnach Areale verschieden hoher cAMP-Konzentrationen, welche lokal begrenzt einzelne Signalkaskaden beeinflussen und somit eine differenzierte Signalübertragung ermöglichen. Eine mögliche Ursache für die Ausbildung solcher Bereiche geringerer cAMP- Konzentrationen (hier als Domänen bezeichnet), ist die hydrolytische Aktivität von Phosphodiesterasen (PDEs), welche als einzige Enzyme die Fähigkeiten besitzen, cAMP zu degradieren.
In dieser Arbeit wird der Einfluss der cAMP-Hydrolyse verschiedener PDEs auf die Größe dieser Domänen evaluiert und mit denen der PDE4A1 verglichen, welche bereits durch unsere Arbeitsgruppe aufgrund ihrer Größe als Nanodomänen definiert wurden. Der Fokus wird dabei auf den Einfluss von kinetischen Eigenschaften der Phosphodiesterasen gelegt. So werden eine PDE mit hoher Umsatzgeschwindigkeit (PDE2A3) und eine PDE mit hoher Substrataffinität (PDE8A1) verglichen. Mithilfe sogenannter Linker, Abstandshaltern definierter Länge, werden zusätzlich die Nanodomänen ausgemessen, um einen direkten Zusammenhang zwischen Größe und kinetischer Eigenschaft anzugeben. Die Zusammenschau der Ergebnisse zeigt, dass die maximale Umsatzgeschwindigkeit der Phosphodiesterasen direkt mit der Größe der Nanodomänen korreliert.
Durch den unmittelbaren Vergleich der gesamten PDE mit ihrer katalytischen Domäne wird zusätzlich der Einfluss von regulatorischen Domänen evaluiert. Es wird gezeigt, dass diese cAMP-Gradienten modulieren können. Bei der PDE2A3 geschieht die Modulation u.a. durch Stimulation mit cGMP, welche höchstwahrscheinlich dosisabhängig ist und somit graduell verläuft. Hiermit präsentieren sich die Domänen als dynamische Bereiche, d.h. sie können in ihrer Ausprägung reguliert werden. In dieser Arbeit wird die Hypothese bestätigt, dass Phosphodiesterasen eine wichtige Rolle in der Kompartimentierung von cAMP spielen, die Gruppe jedoch inhomogener ist, als bislang angenommen. Die Gradienten-Bildung lässt sich nicht bei jeder Phosphodiesterase darstellen (PDE8A1). Einige Phosphodiesterasen (PDE2A3) jedoch bilden Kompartimente, die durch externe Stimuli in ihrer Größe reguliert werden können.
Die Arbeit legt den Grundstein zur breiteren Charakterisierung des spezifischen Einflusses weiterer PDEs auf cAMP-Kompartimentierung, welches nicht nur das Verständnis der Kompartimentierungs-Strategien voranbringt, sondern auch essentiell für das Verständnis der Pathophysiologie zahlreicher Krankheitsbilder, aber auch für das Verständnis bereits angewandter aber auch potentiell neuer Medikamente ist.
The flowers of plants of the genus Ludwigia are an important source of food for several species of bees. In the current study, we conducted an experiment with the aim to describe the reproductive biology and phenology of L. nervosa; to identify the species of visiting bees; analyze the foraging behavior of bees; and to investigate whether the reproductive success of the species is related to the foraging activity of bees. We found that the flowers received visits from several native bee species (n = 7), in addition of the exotic honey bees which came to be the dominant species. During visits the majority of the bees foraged in both resources, pollen and nectar. The significantly higher production of fruits in open pollinated pollination experiment compared to artificial cross pollination, suggests honey bees as effective pollinator of this plant species in the study site. Pollen deposition occurs efficiently, given the absence of pollen limitation. Despite massive visitation of honey bees, Ludwigianervosa is attractive to native bees, and therefore it may help to sustain population of both native and exotic pollinators in fragmented humid areas.
Chronic inflammatory diseases such as rheumatoid arthritis, type 2 diabetes and cardiovascular diseases, are associated with the homeostatic imbalance of one of several physiological systems combined with the lack of spontaneous remission, which causes the disease to persevere throughout patients’ lives. The inflammatory response relies mainly on tissue-resident, pro-inflammatory M1 type macrophages and, consequently, a chance for therapeutic intervention lies in driving macrophage polarization towards the anti-inflammatory M2 phenotype. Therefore, anti-inflammatory cytokines that promote M2 polarization, including interleukin-4 (IL4), have promising therapeutic potential. Unfortunately, their systemic use is hampered by a short serum half-life and dose-limiting toxicity. On the way towards cytokine therapies with superior safety and efficacy, this thesis is focused on designing bioresponsive delivery systems for the anti-inflammatory cytokine IL4.
Chapter 1 describes how anti-inflammatory cytokines are tightly regulated in chronic, systemic inflammation as in rheumatoid arthritis but also in acute, local inflammation as in myocardial infarction. Both diseases show a characteristic progression during which anti-inflammatory cytokine delivery is of variable benefit. A conventional, passive drug delivery system is unlikely to release the cytokines such that the delivery matches the dynamic course of the (patho-)physiological progress. This chapter presents a blueprint for active drug delivery systems equipped with a 24/7 inflammation detector that continuously senses for matrix metalloproteinases (MMP) as surrogate markers of the disease progress and responds by releasing cytokines into the affected tissues at the right time and place. Because they are silent during phases of low disease activity, bioresponsive depots could be used to treat patients in asymptomatic states, as a preventive measure. The drug delivery system only gets activated during flares of inflammation, which are then immediately suppressed by the released cytokine drug and could prevent the steady damage of subclinical chronic inflammation, and therefore reduce hospitalization rates.
In a first proof of concept study on controlled cytokine delivery (chapter 2), we developed IL4-decorated particles aiming at sustained and localized cytokine activity. Genetic code expansion was deployed to generate muteins with the IL4’s lysine 42 replaced by two different unnatural amino acids bearing a side chain suitable for click chemistry modification. The new IL4 muteins were thoroughly characterized to ensure proper folding and full bioactivity. Both muteins showed cell-stimulating ability and binding affinity to IL4 receptor alpha similar to those of wild type IL4. Copper-catalyzed (CuAAC) and strain-promoted (SPAAC) azide–alkyne cycloadditions were used to site-selectively anchor IL4 to agarose particles. These particles had sustained IL4 activity, as demonstrated by the induction of TF-1 cell proliferation and anti-inflammatory M2 polarization of M-CSF-generated human macrophages. This approach of site-directed IL4 anchoring on particles demonstrates that cytokine-functionalized particles can provide sustained and spatially controlled immune-modulating stimuli.
The idea of a 24/7 sensing, MMP driven cytokine delivery system, as described in the introductory chapter, was applied in chapter 3. There, we simulated the natural process of cytokine storage in the extracellular matrix (ECM) by using an injectable solution of IL4 for depot formation by enzyme-catalyzed covalent attachment to ECM components such as fibronectin. The immobilized construct is meant to be cleaved from the ECM by matrix-metalloproteinases (MMPs) which are upregulated during flares of inflammation. These two functionalities are facilitated by a peptide containing two sequences: a protease-sensitive peptide linker (PSL) for MMP cleavage and a sequence for covalent attachment by activated human transglutaminase FXIIIa (TGase) included in the injection mix for co-administration. This peptide was site-selectively conjugated to the unnatural amino acid at IL4 position 42 allowing to preserve wild type bioactivity of IL4. In vitro experiments confirmed the anticipated MMP response towards the PSL and TGase-mediated construct attachment to fibronectin of the ECM. Furthermore, the IL4-peptide conjugates were able to reduce inflammation and protect non-load bearing cartilage along with the anterior cruciate ligament from degradation in an osteoarthritis model in rabbits. This represents the first step towards a minimally invasive treatment option using bioresponsive cytokine depots with potential clinical value for inflammatory conditions.
One of the challenges with this approach was the production of the cytokine conjugate, with incorporation of the unnatural amino acid into IL4 being the main bottleneck. Therefore, in chapter 4, we designed a simplified version of this depot system by genetically fusing the bifunctional peptide via a flexible peptide spacer to murine IL4. While human IL4 loses its activity upon C-terminal elongation, murine IL4 is not affected by this modification. The produced murine IL4 fusion protein could be effectively bound to in vitro grown extracellular matrix in presence of TGase. Moreover, the protease-sensitive linker was selectively recognized and cleaved by MMPs, liberating intact and active IL4, although at a slower rate than expected. Murine IL4 offers the advantage to evaluate the bioresponsive cytokine depot in many available mouse models, which was so far not possible with human IL4 due to species selectivity.
For murine IL4, the approach was further extended to systemic delivery in chapter 5. To increase the half-life and specifically target disease sites, we engineered a murine IL4 variant conjugated with a folate-bearing PEG chain for targeting of activated macrophages. The bioactive IL4 conjugate had a high serum stability and the PEGylation increased the half-life to 4 h in vivo. Surprisingly, the folate moiety did not improve targeting in an antigen-induced arthritis (AIA) mouse model. IL4-PEG performed better in targeting the inflamed joint, while IL4-PEG-folate showed stronger accumulation in the liver. Fortunately, the modular nature of the IL4 conjugate facilitates convenient adaption of PEG chain length and the targeting moiety to further improve the half-life and localization of the cytokine.
In summary, this thesis describes a platform technology for the controlled release of cytokines in response to inflammation. By restricting the release of the therapeutic to the site of inflammation, the benefit-risk ratio of this potent class of biologics can be positively influenced. Future research will help to deepen our understanding of how to perfectly combine cytokine, protease-sensitive linker and immobilization tag or targeting moiety to tackle different diseases.
Kalkaneusfrakturen machen mit 1-2% nur einen geringen Anteil aller Frakturen aus, jedoch sind sie mit einer hohen Rate an Komplikationen verbunden. Die exakte Wiederherstellung der Gelenkkongruenz im Bereich der posterioren Gelenkfacette ist hierbei von zentraler Bedeutung. In dieser biomechanischen Studie wurden drei verschiedene, winkelstabile Plattenosteosynthesen zur Versorgung von Kalkaneusfrakturen im Hinblick auf ihre Stabilität an Kunststoffknochen in einer Materialprüfmaschine getestet und verglichen. Für jede Gruppe wurden an je neun Kalkaneusmodellen Sanders Typ IIB Frakturen erzeugt und anschließend nach Herstellervorgabe versorgt. Von den drei Plattenosteosynthesen waren zwei neuartige, polyaxiale, winkelstabile Systeme und ein konventionelles, winkelstabiles Plattensystem vertreten. Alle Proben wurden auf drei verschiedenen Kraftniveaus (200N, 600N und 1000N) zyklisch und anschließend in einer Maximalkraftuntersuchung getestet. Gemessen wurden das Peak to Peak Displacement bei 200N, 600N und 1000N, die Steifigkeit, der Δ-Gissane-Winkel und die Art des Materialversagens. Ziel dieser Studie war es, anhand dieser Parameter nachzuweisen, ob neuartige, polyaxiale Plattensysteme durch ihre variable Schraubenplatzierung in einem 30°-Konus eine erhöhte biomechanische Stabilität bei Sanders Typ IIB Kalkaneusfrakturen erzeugen. Die Ergebnisse der oben genannten Messparameter wiesen keine statistisch signifikanten Unterschiede (Signifikanzniveau 0,05) auf, weshalb wir unsere Nullhypothese, dass alle drei Plattensysteme eine vergleichbare biomechanische Stabilität besitzen, beibehielten und unsere Gegenhypothese, dass die neuartigen, polyaxialen Plattensysteme eine überlegene biomechanische Stabilität besitzen, verworfen haben. Es bleibt jedoch folgenden biomechanischen und klinischen Studien überlassen, ob die neuartigen Plattensysteme bei anderen Frakturen oder intraoperativ einen biomechanischen, weichteilschonenderen und insgesamt komplikationsloseren Vorteil erzielen können.
In bone tissue engineering, the design of 3D systems capable of recreating composition, architecture and micromechanical environment of the native extracellular matrix (ECM) is still a challenge. While perfusion bioreactors have been proposed as potential tool to apply biomechanical stimuli, its use has been limited to a low number of biomaterials. In this work, we propose the culture of human mesenchymal stem cells (hMSC) in biomimetic mineralized recombinant collagen scaffolds with a perfusion bioreactor to simultaneously provide biochemical and biophysical cues guiding stem cell fate. The scaffolds were fabricated by mineralization of recombinant collagen in the presence of magnesium (RCP.MgAp). The organic matrix was homogeneously mineralized with apatite nanocrystals, similar in composition to those found in bone. X-Ray microtomography images revealed isotropic porous structure with optimum porosity for cell ingrowth. In fact, an optimal cell repopulation through the entire scaffolds was obtained after 1 day of dynamic seeding in the bioreactor. Remarkably, RCP.MgAp scaffolds exhibited higher cell viability and a clear trend of up-regulation of osteogenic genes than control (non-mineralized) scaffolds. Results demonstrate the potential of the combination of biomimetic mineralization of recombinant collagen in presence of magnesium and dynamic culture of hMSC as a promising strategy to closely mimic bone ECM.
Biofabrication, including printing technologies, has emerged as a powerful approach to the design of disease models, such as in cancer research. In breast cancer, adipose tissue has been acknowledged as an important part of the tumor microenvironment favoring tumor progression. Therefore, in this study, a 3D-printed breast cancer model for facilitating investigations into cancer cell-adipocyte interaction was developed. First, we focused on the printability of human adipose-derived stromal cell (ASC) spheroids in an extrusion-based bioprinting setup and the adipogenic differentiation within printed spheroids into adipose microtissues. The printing process was optimized in terms of spheroid viability and homogeneous spheroid distribution in a hyaluronic acid-based bioink. Adipogenic differentiation after printing was demonstrated by lipid accumulation, expression of adipogenic marker genes, and an adipogenic ECM profile. Subsequently, a breast cancer cell (MDA-MB-231) compartment was printed onto the adipose tissue constructs. After nine days of co-culture, we observed a cancer cell-induced reduction of the lipid content and a remodeling of the ECM within the adipose tissues, with increased fibronectin, collagen I and collagen VI expression. Together, our data demonstrate that 3D-printed breast cancer-adipose tissue models can recapitulate important aspects of the complex cell–cell and cell–matrix interplay within the tumor-stroma microenvironment
We report four new luminescent tetracationic bis-triarylborane DNA and RNA sensors that show high binding affinities, in several cases even in the nanomolar range. Three of the compounds contain substituted, highly emissive and structurally flexible bis(2,6-dimethylphenyl-4-ethynyl)arene linkers (3: arene=5,5′-2,2′-bithiophene; 4: arene=1,4-benzene; 5: arene=9,10-anthracene) between the two boryl moieties and serve as efficient dual Raman and fluorescence chromophores. The shorter analogue 6 employs 9,10-anthracene as the linker and demonstrates the importance of an adequate linker length with a certain level of flexibility by exhibiting generally lower binding affinities than 3–5. Pronounced aggregation–deaggregation processes are observed in fluorimetric titration experiments with DNA for compounds 3 and 5. Molecular modelling of complexes of 5 with AT-DNA, suggest the minor groove as the dominant binding site for monomeric 5, but demonstrate that dimers of 5 can also be accommodated. Strong SERS responses for 3–5 versus a very weak response for 6, particularly the strong signals from anthracene itself observed for 5 but not for 6, demonstrate the importance of triple bonds for strong Raman activity in molecules of this compound class. The energy of the characteristic stretching vibration of the C≡C bonds is significantly dependent on the aromatic moiety between the triple bonds. The insertion of aromatic moieties between two C≡C bonds thus offers an alternative design for dual Raman and fluorescence chromophores, applicable in multiplex biological Raman imaging.
Bismuth Amides Mediate Facile and Highly Selective Pn–Pn Radical‐Coupling Reactions (Pn=N, P, As)
(2021)
The controlled release of well‐defined radical species under mild conditions for subsequent use in selective reactions is an important and challenging task in synthetic chemistry. We show here that simple bismuth amide species [Bi(NAr\(_2\))\(_3\)] readily release aminyl radicals [NAr\(_2\)]. at ambient temperature in solution. These reactions yield the corresponding hydrazines, Ar\(_2\)N−NAr\(_2\), as a result of highly selective N−N coupling. The exploitation of facile homolytic Bi−Pn bond cleavage for Pn−Pn bond formation was extended to higher homologues of the pnictogens (Pn=N–As): homoleptic bismuth amides mediate the highly selective dehydrocoupling of HPnR\(_2\) to give R\(_2\)Pn−PnR\(_2\). Analyses by NMR and EPR spectroscopy, single‐crystal X‐ray diffraction, and DFT calculations reveal low Bi−N homolytic bond‐dissociation energies, suggest radical coupling in the coordination sphere of bismuth, and reveal electronic and steric parameters as effective tools to control these reactions.
The synthesis, photophysical, and electrochemical properties of selectively mono-, bis- and tris-dimethylamino- and trimethylammonium-substituted bis-triarylborane bithiophene chromophores are presented along with the water solubility and singlet oxygen sensitizing efficiency of the cationic compounds Cat\(^{1+}\), Cat\(^{2+}\), Cat(i)\(^{2+}\), and Cat\(^{3+}\). Comparison with the mono-triarylboranes reveals the large influence of the bridging unit on the properties of the bis-triarylboranes, especially those of the cationic compounds. Based on these preliminary investigations, the interactions of Cat\(^{1+}\), Cat\(^{2+}\), Cat(i)\(^{2+}\), and Cat\(^{3+}\) with DNA, RNA, and DNApore were investigated in buffered solutions. The same compounds were investigated for their ability to enter and localize within organelles of human lung carcinoma (A549) and normal lung (WI38) cells showing that not only the number of charges but also their distribution over the chromophore influences interactions and staining properties.
The past decades have witnessed the development of new pharmaceutical compounds that modulate receptor function by targeting allosteric sites. Allosteric sites are, by definition, domains topographically distinct from the orthosteric binding pocket where the natural ligand binds. Exploring the possibilities of linking orthosteric and allosteric pharmacophores in one compound to yield ‘bitopic’ compounds is a strategy derived from the “message-address” concept by Schwyzer , first applied to GPCRs by Portoghese et al. This concept explicitly underlines the orthosteric/allosteric combination, in opposite to the more general umbrella term bivalent. The broad possibilities of bitopic ligands in the pharmaceutical field are under continuous study. Bitopic compounds are promising pharmaceutical tools for taking advantage of the allosteric binding to achieve subtype selectivity while preserving high affinity at the receptor. The development of bitopic ligands, based on the idea of combining high affinity (via orthosteric sites) with high selectivity (via allosteric sites), have led to the development of highly selective bivalent ligands for GPCRs , such as for the opioid receptors , muscarinic acetylcholine receptors (mAChRs), serotonin receptors, cannabinoid receptors, and gonadotropin-releasing hormone receptors. This concept has even been extended to other receptors, for examples nicotinic receptors and other proteins, such as acetylcholinesterases and the tyrosine kinase receptors TrkA and TrkC. The reasons to pursue a bitopic ligand approach are various. An improved affinity for the target GPCR and/or an improved selectivity either at the level of receptor subtype, or at the level of signaling pathway. Another advantage of bitopic ligands over purely allosteric ligands is that the former rely on the appropriate presence of endogenous agonist tone to mediate their effects, whereas a bitopic ligand would engage the orthosteric site irrespective of the presence or absence of endogenous tone. By way of introduction to the hybrid approach, a review of the concept of hybrids compounds targeting the cholinergic system is presented in section A of this thesis. Recent updates in hybrid molecule design as a strategy for selectively addressing multiple target proteins involved in Alzheimer's disease (AD) is here reported . This represents the potential and the growing interest in hybrid compound as pharmacological tools to achieve receptor subtype selectivity and/or, to study the overall functional activity of the receptor. Until now, muscarinic acetylcholine receptors (mAChRs) have proved to be a particularly fruitful receptor model for the development and characterization of bitopic ligands. In this thesis, several examples of new muscarinic bitopic approach are reported in the results section. A study of bipharmacophoric ligands composed of the muscarinic positive allosteric modulators (BQCAderived compounds) linked with chain of various lengths to different orthosteric building blocks is reported in the result part 1. Synthesis and examination of the potential pharmacological characteristic of Oxotremorine-BQCAd compounds and Xanomeline-BQCAd hybrid derivatives are described in results parts 2 and 4, respectively. Moreover, the bitopic concept has even been extended to other proteins, such as acetylcholinesterase. In the result part 5 an overview of the new Tacrine-Xanomeline hybrids aiming to improve the inhibitory potency of the acetylcholinesterase and simultaneously to increase the cholinergic tone, via the xanomelinic portion acting on the M1 receptor is given. A new trivalent approach is presented for the first time to deepen the study of the M1 muscarinic receptor in the result part 6. Moreover, the synthesis of a new series of iperoxo-derived alkane, bis(ammonio)alkane-type and rigidified chain ligands is given in the result part 7 together with some prospects for further research.
Die operative Verjüngung des Auges stellt einen der am häufigsten nachgefragten Eingriffe im ästhetischen Spektrum dar. Die multikulturelle Bevölkerungsstruktur bedingt, dass auch „asiatisch“ imponierende Augen behandelt werden. „Asiatische“ Augen sind aber nicht nur bei Asiaten anzutreffen, sondern in unterschiedlicher Ausprägung auch bei Patienten aus dem Nahen und Mittleren Osten. Das asiatische Auge stellt in Bezug auf Verjüngungsmöglichkeiten eine eigene Entität dar. Während die klassische „Korrektur“ des asiatischen Auges eine etablierte und durch eine Vielzahl von verschiedenen Techniken mit vorhersehbaren Ergebnissen verbundene Methode ist, ist eine „verjüngende“ Blepharoplastik des asiatischen Auges komplexer zu bewerten [1, 3, 5, 10]. Die Operationsmethoden für das „asiatische“ Auge sind für jüngere Patienten intendiert, bei denen es überwiegend um die Korrektur des Epikanthus geht. Diese Techniken ziehen eine gewünschte Veränderung des periorbitalen Erscheinungsbildes nach sich, wobei das asiatische Aussehen teilweise zugunsten eines vermehrt „europäischen“ Aussehens beeinflusst wird. Fraglich bleibt, ob eine Veränderung zu einem europäischen Aussehen hin auch bei einem alternden Patienten einer Verjüngung gleichkommt. Prinzipiell imponiert ein derart operiertes asiatisches Auge „künstlich“, eine Tatsache die bei alternden Patienten als noch störender als der Alterungsprozess selbst empfunden werden dürfte. Daher ist der Wunsch nach einer Verjüngung ohne Verlust des typischen asiatischen Erscheinungsbildes des Auges chirurgisch nicht mit der klassischen Technik bei Europäern umzusetzen. Während die Behandlung durch eine klassische Blepharoplastik ein unnatürliches Aussehen zur Folge hat, kann unter Respektierung der asiatischen anatomischen Besonderheiten eine natürlich wirkende Verjüngung erreicht werden.
Bloch oscillations are a phenomenon well known from quantum mechanics where electrons in a lattice experience an oscillatory motion in the presence of an electric field gradient. Here, the authors report on Bloch oscillations of hybrid light−matter particles, called exciton‐polaritons (polaritons), being confined in an array of coupled microcavity waveguides. To this end, the waveguide widths and their mutual couplings are carefully designed such that a constant energy gradient is induced perpendicular to the direction of motion of the propagating polaritons. This technique allows us to directly observe and study Bloch oscillations in real‐ and momentum‐space. Furthermore, the experimental findings are supported by numerical simulations based on a modified Gross–Pitaevskii approach. This work provides an important transfer of basic concepts of quantum mechanics to integrated solid state devices, using quantum fluids of light.
The present thesis demonstrates how different thermodynamic aspects of self-assembly and stimuli-responsive properties in water can be encoded on the structure of π-amphiphiles, consisting of perylene or naphthalene bisimide cores. Initially, quantitative thermodynamic insights into the entropically-driven self-assembly was studied for a series of naphthalene bisimides with UV/Vis and ITC measurements, which demonstrated that their thermodynamic profile of aggregation is heavily influenced by the OEG side chains. Subsequently, a control over the bifurcated thermal response of entropically driven and commonly observed enthalpically driven self-assembly was achieved by the modulation of glycol chain orientation. Finally, Lower Critical Solution Temperature (LCST) phenomenon observed for these dyes was investigated as a precise control of this behavior is quintessential for self-assembly studies as well as to generate ‘smart’ materials. It could be shown that the onset of phase separation for these molecules can be encoded in their imide substituents, and they are primarily determined by the supramolecular packing, rather than the hydrophobicity of individual monomers.
Although the bone marrow contains most hematopoietic activity during adulthood, hematopoietic stem and progenitor cells can be recovered from various extramedullary sites. Cells with hematopoietic progenitor properties have even been reported in the adult brain under steady‐state conditions, but their nature and localization remain insufficiently defined. Here, we describe a heterogeneous population of myeloid progenitors in the leptomeninges of adult C57BL/6 mice. This cell pool included common myeloid, granulocyte/macrophage, and megakaryocyte/erythrocyte progenitors. Accordingly, it gave rise to all major myelo‐erythroid lineages in clonogenic culture assays. Brain‐associated progenitors persisted after tissue perfusion and were partially inaccessible to intravenous antibodies, suggesting their localization behind continuous blood vessel endothelium such as the blood‐arachnoid barrier. Flt3\(^{Cre}\) lineage tracing and bone marrow transplantation showed that the precursors were derived from adult hematopoietic stem cells and were most likely continuously replaced via cell trafficking. Importantly, their occurrence was tied to the immunologic state of the central nervous system (CNS) and was diminished in the context of neuroinflammation and ischemic stroke. Our findings confirm the presence of myeloid progenitors at the meningeal border of the brain and lay the foundation to unravel their possible functions in CNS surveillance and local immune cell production.
Summary
In adult hypophosphatasia (HPP) patients, elevated lumbar spine dual X-ray absorptiometry (DXA) values are associated with markers of disease severity and disease-specific fracture risk while femoral bone mineral density (BMD), being largely unaffected by the disease severity, may still be useful to monitor other causes of increased fracture risk due to low BMD.
Introduction
Hypophosphatasia (HPP) is a rare inherited metabolic disorder due to deficient activity of the tissue-nonspecific alkaline phosphatase (TNAP). Clinical manifestation in adult HPP patients is manifold including an increased risk for fractures, but data regarding clinical significance of DXA measurement and associations with fracture risk and disease severity is scarce.
Methods
Retrospective single-center analysis of DXA scans in patients with confirmed HPP (documented mutation, clinical symptoms, low alkaline phosphatase activity). Further data evaluation included disease-related fractures, laboratory results (alkaline phosphatase, pyridoxalphosphate, phosphoethanolamine), and medical history.
Results
Analysis included 110 patients (84 female, mean age of 46.2 years) of whom 37.3% (n = 41) were harboring two mutations. Average T-Score level at the lumbar spine was − 0.1 (SD 1.9), and mean total hip T-Score was − 1.07 (SD 0.15). Both lower ALP activity and higher substrate levels (pyridoxalphosphate and phosphoethanolamine) were significantly correlated with increased lumbar spine T-Score levels (p < 0.001) while BMD at the hip was not affected by indicators of disease severity. Increased lumbar spine BMD was significantly associated with an increased risk for HPP-related fractures, prevalent in 22 (20%) patients (p < 0.001) with 21 of them having biallelic mutations.
Conclusion
BMD in adult HPP patients is not systematically reduced. Conversely, increased lumbar spine BMD appears to be associated with severely compromised mineralization and increased risk for HPP-related fractures while BMD at the hip appears unaffected by indicators of disease severity, suggesting suitability of this anatomic location for assessing and discerning disorders with increased fracture risk owing to reduced BMD like osteoporosis.
Trial registration number
German register for clinical studies (DRKS00014022)
Date of registration
02/10/2018 – retrospectively registered
Summary
There is limited understanding of how asfotase alfa affects mineral metabolism and bone turnover in adults with pediatric-onset hypophosphatasia. This study showed that adults with hypophosphatasia treated with asfotase alfa experienced significant changes in biochemical markers of bone and mineral metabolism, possibly reflecting enhanced bone remodeling of previously osteomalacic bone.
Introduction
Hypophosphatasia (HPP), due to a tissue nonspecific alkaline phosphatase (TNSALP) deficiency, can cause impaired bone mineralization and turnover. Although HPP may be treated with asfotase alfa, an enzyme replacement therapy, limited data are available on how treatment with asfotase alfa affects mineral metabolism and bone turnover in adults with HPP.
Methods
ALP substrates, bone turnover and mineral metabolism markers, and bone mineral density (BMD) data from EmPATHY, a single-center, observational study of adults (≥ 18 years) with pediatric-onset HPP treated with asfotase alfa (NCT03418389), were collected during routine clinical care and analyzed from baseline through 24 months of treatment.
Results
Data from 21 patients showed significantly increased ALP activity and reduced urine phosphoethanolamine (PEA)/creatinine (Cr) ratios after baseline through 24 months of asfotase alfa treatment. There were significant transient increases in parathyroid hormone 1-84 (PTH), osteocalcin, and procollagen type 1 N-propeptide (P1NP) levels at 3 and 6 months and in tartrate-resistant acid phosphatase 5b (TRAP5b) levels at 3 months, with a significant decrease in N-terminal telopeptide of type 1 collagen (NTX) levels at 24 months. Lumbar spine BMD T scores continuously increased during treatment.
Conclusion
Significant changes in bone turnover and mineral metabolism markers after asfotase alfa treatment suggest that treatment-mediated mineralization may enable remodeling and bone turnover on previously unmineralized surfaces. Urine PEA/Cr ratios may be a useful parameter in monitoring treatment during routine care.
Cyclic alkyl(amino)carbene-stabilized (cyano)hydroboryl anions were synthesized by deprotonation of (cyano)dihydroborane precursors. While they display boron-centered nucleophilic reactivity towards organohalides, generating fully unsymmetrically substituted cyano(hydro)organoboranes, they show cyano-nitrogen-centered nucleophilic reactivity towards haloboranes, resulting in the formation of hitherto unknown linear 2-aza-1,4-diborabutatrienes.
Background: Glioblastoma multiforme (GBM) and metastatic triple-negative breast cancer (TNBC) with PTEN mutations often lead to brain dissemination with poor patient outcome, thus new therapeutic targets are needed. To understand signaling, controlling the dynamics and mechanics of brain tumor cell migration, we implemented GBM and TNBC cell lines and designed 3D aligned microfibers and scaffolds mimicking brain structures. Methods: 3D microfibers and scaffolds were printed using melt electrowriting. GBM and TNBC cell lines with opposing PTEN genotypes were analyzed with RHO-ROCK-PTEN inhibitors and PTEN rescue using live-cell imaging. RNA-sequencing and qPCR of tumor cells in 3D with microfibers were performed, while scanning electron microscopy and confocal microscopy addressed cell morphology. Results: In contrast to the PTEN wildtype, GBM and TNBC cells with PTEN loss of function yielded enhanced durotaxis, topotaxis, adhesion, amoeboid migration on 3D microfibers and significant high RHOB expression. Functional studies concerning RHOB-ROCK-PTEN signaling confirmed the essential role for the above cellular processes. Conclusions: This study demonstrates a significant role of the PTEN genotype and RHOB expression for durotaxis, adhesion and migration dependent on 3D. GBM and TNBC cells with PTEN loss of function have an affinity for stiff brain structures promoting metastasis. 3D microfibers represent an important tool to model brain metastasizing tumor cells, where RHO-inhibitors could play an essential role for improved therapy.
Regional iron accumulation and α‐synuclein (α‐syn) spreading pathology within the central nervous system are common pathological findings in Parkinson's disease (PD). Whereas iron is known to bind to α‐syn, facilitating its aggregation and regulating α‐syn expression, it remains unclear if and how iron also modulates α‐syn spreading. To elucidate the influence of iron on the propagation of α‐syn pathology, we investigated α‐syn spreading after stereotactic injection of α‐syn preformed fibrils (PFFs) into the striatum of mouse brains after neonatal brain iron enrichment. C57Bl/6J mouse pups received oral gavage with 60, 120, or 240 mg/kg carbonyl iron or vehicle between postnatal days 10 and 17. At 12 weeks of age, intrastriatal injections of 5‐µg PFFs were performed to induce seeding of α‐syn aggregates. At 90 days post‐injection, PFFs‐injected mice displayed long‐term memory deficits, without affection of motor behavior. Interestingly, quantification of α‐syn phosphorylated at S129 showed reduced α‐syn pathology and attenuated spreading to connectome‐specific brain regions after brain iron enrichment. Furthermore, PFFs injection caused intrastriatal microglia accumulation, which was alleviated by iron in a dose‐dependent way. In primary cortical neurons in a microfluidic chamber model in vitro, iron application did not alter trans‐synaptic α‐syn propagation, possibly indicating an involvement of non‐neuronal cells in this process. Our study suggests that α‐syn PFFs may induce cognitive deficits in mice independent of iron. However, a redistribution of α‐syn aggregate pathology and reduction of striatal microglia accumulation in the mouse brain may be mediated via iron‐induced alterations of the brain connectome.
Colorectal cancer (CRC) is the third most common malignancy worldwide. Most patients with metastatic CRC develop liver or lung metastases, while a minority suffer from brain metastases. There is little information available regarding the presentation, treatment, and overall survival of brain metastases (BM) from CRC. This systematic review and meta-analysis includes data collected from three major databases (PubMed, Cochrane, and Embase) based on the key words “brain”, “metastas*”, “tumor”, “colorectal”, “cancer”, and “malignancy”. In total, 1318 articles were identified in the search and 86 studies matched the inclusion criteria. The incidence of BM varied between 0.1% and 11.5%. Most patients developed metastases at other sites prior to developing BM. Lung metastases and KRAS mutations were described as risk factors for additional BM. Patients with BM suffered from various symptoms, but up to 96.8% of BM patients were asymptomatic at the time of BM diagnosis. Median survival time ranged from 2 to 9.6 months, and overall survival (OS) increased up to 41.1 months in patients on a multimodal therapy regimen. Several factors including age, blood levels of carcinoembryonic antigen (CEA), multiple metastases sites, number of brain lesions, and presence of the KRAS mutation were predictors of OS. For BM diagnosis, MRI was considered to be state of the art. Treatment consisted of a combination of surgery, radiation, or systemic treatment.
Background Current research in breast cancer focuses on individualization of local and systemic therapies with adequate escalation or de-escalation strategies. As a result, about two-thirds of breast cancer patients can be cured, but up to one-third eventually develop metastatic disease, which is considered incurable with currently available treatment options. This underscores the importance to develop a metastatic recurrence score to escalate or de-escalate treatment strategies. Patients and methods Data from 10,499 patients were available from 17 clinical cancer registries (BRENDA-project. In total, 8566 were used to develop the BRENDA-Index. This index was calculated from the regression coefficients of a Cox regression model for metastasis-free survival (MFS). Based on this index, patients were categorized into very high, high, intermediate, low, and very low risk groups forming the BRENDA-Score. Bootstrapping was used for internal validation and an independent dataset of 1883 patients for external validation. The predictive accuracy was checked by Harrell's c-index. In addition, the BRENDA-Score was analyzed as a marker for overall survival (OS) and compared to the Nottingham prognostic score (NPS). Results: Intrinsic subtypes, tumour size, grading, and nodal status were identified as statistically significant prognostic factors in the multivariate analysis. The five prognostic groups of the BRENDA-Score showed highly significant (p < 0.001) differences regarding MFS:low risk: hazard ratio (HR) = 2.4, 95%CI (1.7–3.3); intermediate risk: HR = 5.0, 95%CI.(3.6–6.9); high risk: HR = 10.3, 95%CI (7.4–14.3) and very high risk: HR = 18.1, 95%CI (13.2–24.9). The external validation showed congruent results. A multivariate Cox regression model for OS with BRENDA-Score and NPS as covariates showed that of these two scores only the BRENDA-Score is significant (BRENDA-Score p < 0.001; NPS p = 0.447). Therefore, the BRENDA-Score is also a good prognostic marker for OS. Conclusion: The BRENDA-Score is an internally and externally validated robust predictive tool for metastatic recurrence in breast cancer patients. It is based on routine parameters easily accessible in daily clinical care. In addition, the BRENDA-Score is a good prognostic marker for overall survival. Highlights: The BRENDA-Score is a highly significant predictive tool for metastatic recurrence of breast cancer patients. The BRENDA-Score is stable for at least the first five years after primary diagnosis, i.e., the sensitivities and specificities of this predicting system is rather similar to the NPI with AUCs between 0.76 and 0.81 the BRENDA-Score is a good prognostic marker for overall survival.
Background
Pemphigus is a severe bullous autoimmune skin disease. Pemphigus foliaceus (PF) is characterized by antidesmoglein (Dsg) 1 IgG causing epidermal blistering; mucosal pemphigus vulgaris (mPV) by anti‐Dsg3 IgG inducing erosions in the mucosa; and mucocutaneous pemphigus vulgaris (PV) by affecting both, with autoantibodies targeting Dsg1 and Dsg3.
Objectives
To characterize the Ca\(^{2+}\) flux pathway and delineate its importance in pemphigus pathogenesis and clinical phenotypes caused by different antibody profiles.
Methods
Immunoprecipitation, Ca\(^{2+}\) flux analysis, Western blotting, immunofluorescence staining, dissociation assays and a human skin ex vivo model were used.
Results
PV IgG and PF IgG, but neither Dsg3‐specific monoclonal antibody (AK23) nor mPV IgG, caused Ca\(^{2+}\) influx in primary human keratinocytes. Phosphatidylinositol 4‐kinase α interacts with Dsg1 but not with Dsg3. Its downstream target – phospholipase‐C‐γ1 (PLC) – was activated by PV IgG and PF IgG but not AK23 or mPV IgG. PLC releases inositol 1,4,5‐trisphosphate (IP3) causing IP3 receptor (IP3R) activation and Ca2+ flux from the endoplasmic reticulum into the cytosol, which stimulates Ca2+ release‐activated channels (CRAC)‐mediated Ca\(^{2+}\) influx. Inhibitors against PLC, IP3R and CRAC effectively blocked PV IgG and PF IgG‐induced Ca\(^{2+}\) influx; ameliorated alterations of Dsg1 and Dsg3 localization, and reorganization of keratin and actin filaments; and inhibited loss of cell adhesion in vitro. Finally, inhibiting PLC or IP3R was protective against PV IgG‐induced blister formation and redistribution of Dsg1 and Dsg3 in human skin ex vivo.
Conclusions
Ca2+‐mediated signalling is important for epidermal blistering and dependent on the autoantibody profile, which indicates different roles for signalling complexes organized by Dsg1 and Dsg3. Interfering with PLC and Ca\(^{2+}\) signalling may be a promising approach to treat epidermal manifestations of pemphigus.
Objectives: We compared the effect of different didactic formats - e - learning and role-playing - on medical students' knowledge and counselling skills in smoking cessation training.
Methods: At a German medical school, 145 third-year students were randomly allocated to attend an online course with video examples or an attendance course with role-playing. Students were trained in smoking cessation counselling according to the 5A's (ask, advise, assess, assist, arrange) for approximately 90 minutes. Practical skills were measured in an objective structured clinical examination (OSCE) and represent the primary endpoint of this prospective comparative study. Additionally, changes in theoretic knowledge were assessed by pre - and post - interventional questionnaires and a final written exam.
Results: In the OSCE, overall scores were higher in the attendance group (Mdn=70.8 % vs. 62.8 %; U=119; p=.087, n=36), but a statistical advantage was only found in one single counselling sequence (“Assist”: Mdn=66.7 % vs. 51.4 %; p = .049) and the rating of the standardised patients (M=4.7 vs. 4.2 out of 5 points, t(27.836)=2.0, p=.028). Students’ results (n=130) from self-assessment and written exams suggest that both approaches are equally well suited to increase theoretical knowledge. The online course was more time efficient (90 vs. 73 minutes).
Conclusions: Seminar and web-based training seem equally well suited for transferring knowledge and skills on tobacco cessation counselling. Considering their particular strengths, these two teaching approaches could be combined.
The incidence of cancer cases is rising steadily, while improved early detection and new cancer-specific therapies are reducing the mortality rate. In addition to curing cancer or prolonging life, increasing the quality of life is thus an important goal of oncology, which is why the burdens of cancer and treatment are becoming more important. A common side effect of cancer and its therapy is cancer-related fatigue, a tiredness that manifests itself on physical, emotional and cognitive levels and is not in proportion to previous physical efforts. Since the etiology of fatigue has not yet been fully clarified, symptom-oriented therapy is preferable to cause-specific therapy. In addition to activity management, sleep hygiene, and cognitive behavioral therapy, mind-body interventions such as yoga are recommended for reducing fatigue.
Previous studies with small sample sizes were able to examine the efficacy of yoga regarding fatigue predominantly in patients with breast cancer. Long-term effects of yoga have rarely been studied and there have been no attempts to increase long-term effects through interventions such as reminder e-mails. This dissertation takes a closer look at these mentioned aspects of the study sample and long-term effects. An 8-week randomized controlled yoga intervention was conducted, including patients with different cancer types reporting mild to severe fatigue. Following the 8-week yoga therapy, a randomized group of participants received weekly reminder e-mails for 6 months for regular yoga practice, whereas the control group did not receive reminder e-mails.
The first paper is a protocol article, which addresses the design and planned implementation of the research project this dissertation is based upon. This serves to ensure better replicability and comparability with other yoga studies. Due to a very low consent rate of patients in the pilot phase, it was necessary to deviate from the protocol article in the actual implementation and the planned inclusion criterion of fatigue >5 was reduced to fatigue >1.
The second paper examines the efficacy of the eight-week yoga intervention. Patients in the intervention group who participated in the yoga classes seven times or more showed a significantly greater reduction in general and physical fatigue than those who participated less often. The efficacy of yoga was related to the number of attended yoga sessions. Women with breast cancer who participated in yoga reported greater reductions in fatigue than women with other cancer types. There was also an improvement for depression and quality of life after eight weeks of yoga therapy compared to no yoga therapy. These results imply that yoga is helpful in reducing depression and cancer-related fatigue, especially in terms of physical aspects and improving quality of life.
The third paper focuses on the efficacy of reminder e-mails in terms of fatigue and practice frequency. Patients who received reminder e-mails reported greater reductions in general and emotional fatigue, as well as significant increases in practice frequency, compared to patients who did not receive reminder e-mails. Compared to fatigue scores before yoga, significantly lower fatigue and depression scores and higher quality of life were reported after yoga therapy and at follow-up six months later. Weekly e-mail reminders after yoga therapy may have positive effects on general and emotional fatigue and help cancer patients with fatigue establish a regular yoga practice at home. However, higher practice frequency did not lead to higher improvement in physical fatigue as found in Paper 2. This may indicate other factors that influence the efficacy of yoga practice on physical fatigue, such as mindfulness or side effects of therapy.
This research project provides insight into the efficacy of yoga therapy for oncology patients with fatigue. It is important that such interventions be offered early, while fatigue symptoms are not too severe. Regular guided yoga practice can reduce physical fatigue, but subsequent yoga practice at home does not further reduce physical fatigue. Reminder emails after completed yoga therapy could only reduce patients' emotional fatigue. It may be that physical fatigue was reduced as much as possible by the previous yoga therapy and that there was a floor effect, or it may be that reminder emails are not suitable as an intervention to reduce physical fatigue at all. Further research is needed to examine the mechanisms of the different interventions in more detail and to find appropriate interventions that reduce all levels of fatigue equally.
The most important stereodynamic feature of carbo[n]helicenes is the interconversion of their enantiomers. The Gibbs activation energy (ΔG≠(T)) of this process, which determines the rate of enantiomerization, dictates the configurational stability of [n]helicenes. High values of ΔG≠(T) are required for applications of functional chiral molecules incorporating [n]helicenes or helicene substructures. This minireview provides an overview of the mechanism, recent developments, and factors affecting the enantiomerization of [n]helicenes, which will accelerate the design process of configurationally stable functional chiral molecules based on helicene substructures. Additionally, this minireview addresses the misconception and irregularities in the recent literature on how the terms “racemization” and “enantiomerization” are used as well as how the activation parameters are calculated for [n]helicenes and related compounds.
Background: Although cardiovascular rehabilitation (CR) is well accepted in general, CR-attendance and delivery still considerably vary between the European countries. Moreover, clinical and prognostic effects of CR are not well established for a variety of cardiovascular diseases. Methods: The guidelines address all aspects of CR including indications, contents and delivery. By processing the guidelines, every step was externally supervised and moderated by independent members of the “Association of the Scientific Medical Societies in Germany” (AWMF). Four meta-analyses were performed to evaluate the prognostic effect of CR after acute coronary syndrome (ACS), after coronary bypass grafting (CABG), in patients with severe chronic systolic heart failure (HFrEF), and to define the effect of psychological interventions during CR. All other indications for CR-delivery were based on a predefined semi-structured literature search and recommendations were established by a formal consenting process including all medical societies involved in guideline generation. Results: Multidisciplinary CR is associated with a significant reduction in all-cause mortality in patients after ACS and after CABG, whereas HFrEF-patients (left ventricular ejection fraction <40%) especially benefit in terms of exercise capacity and health-related quality of life. Patients with other cardiovascular diseases also benefit from CR-participation, but the scientific evidence is less clear. There is increasing evidence that the beneficial effect of CR strongly depends on “treatment intensity” including medical supervision, treatment of cardiovascular risk factors, information and education, and a minimum of individually adapted exercise volume. Additional psychologic interventions should be performed on the basis of individual needs. Conclusions: These guidelines reinforce the substantial benefit of CR in specific clinical indications, but also describe remaining deficits in CR-delivery in clinical practice as well as in CR-science with respect to methodology and presentation.
Background: Scientific guidelines have been developed to update and harmonize exercise based cardiac rehabilitation (ebCR) in German speaking countries. Key recommendations for ebCR indications have recently been published in part 1 of this journal. The present part 2 updates the evidence with respect to contents and delivery of ebCR in clinical practice, focusing on exercise training (ET), psychological interventions (PI), patient education (PE). In addition, special patients' groups and new developments, such as telemedical (Tele) or home-based ebCR, are discussed as well. Methods: Generation of evidence and search of literature have been described in part 1. Results: Well documented evidence confirms the prognostic significance of ET in patients with coronary artery disease. Positive clinical effects of ET are described in patients with congestive heart failure, heart valve surgery or intervention, adults with congenital heart disease, and peripheral arterial disease. Specific recommendations for risk stratification and adequate exercise prescription for continuous-, interval-, and strength training are given in detail. PI when added to ebCR did not show significant positive effects in general. There was a positive trend towards reduction in depressive symptoms for “distress management” and “lifestyle changes”. PE is able to increase patients’ knowledge and motivation, as well as behavior changes, regarding physical activity, dietary habits, and smoking cessation. The evidence for distinct ebCR programs in special patients’ groups is less clear. Studies on Tele-CR predominantly included low-risk patients. Hence, it is questionable, whether clinical results derived from studies in conventional ebCR may be transferred to Tele-CR. Conclusions: ET is the cornerstone of ebCR. Additional PI should be included, adjusted to the needs of the individual patient. PE is able to promote patients self-management, empowerment, and motivation. Diversity-sensitive structures should be established to interact with the needs of special patient groups and gender issues. Tele-CR should be further investigated as a valuable tool to implement ebCR more widely and effectively.
Articular cartilage damage caused by sports accidents, trauma or gradual wear and tear can lead to degeneration and the development of osteoarthritis because cartilage tissue has only limited capacity for intrinsic healing. Osteoarthritis causes reduction of mobility and chronic pain and is one of the leading causes of disability in the elderly population. Current clinical treatment options can reduce pain and restore mobility for some time, but the formed repair tissue has mostly inferior functionality compared to healthy articular cartilage and does not last long-term. Articular cartilage tissue engineering is a promising approach for the improvement of the quality of cartilage repair tissue and regeneration. In this thesis, a promising new cell type for articular cartilage tissue engineering, the so-called articular cartilage progenitor cell (ACPC), was investigated for the first time in the two different hydrogels agarose and HA-SH/P(AGE-co-G) in comparison to mesenchymal stromal cells (MSCs). In agarose, ACPCs´ and MSCs´ chondrogenic capacity was investigated under normoxic (21 % oxygen) and hypoxic (2 % oxygen) conditions in monoculture constructs and in zonally layered co-culture constructs with ACPCs in the upper layer and MSCs in the lower layer. In the newly developed hyaluronic acid (HA)-based hydrogel HA-SH/P(AGE-co-G), chondrogenesis of ACPCs and MSCs was also evaluated in monoculture constructs and in zonally layered co-culture constructs like in agarose hydrogel. Additionally, the contribution of the bioactive molecule hyaluronic acid to chondrogenic gene expression of MSCs was investigated in 2D monolayer, 3D pellet and HA-SH hydrogel culture. It was shown that both ACPCs and MSCs could chondrogenically differentiate in agarose and HA-SH/P(AGE-co-G) hydrogels. In agarose hydrogel, ACPCs produced a more articular cartilage-like tissue than MSCs that contained more glycosaminoglycan (GAG), less type I collagen and only little alkaline phosphatase (ALP) activity. Hypoxic conditions did not increase extracellular matrix (ECM) production of ACPCs and MSCs significantly but improved the quality of the neo-cartilage tissue produced by MSCs. The creation of zonal agarose constructs with ACPCs in the upper layer and MSCs in the lower layer led to an ECM production in zonal hydrogels that lay in general in between the ECM production of non-zonal ACPC and MSC hydrogels. Even though zonal co-culture of ACPCs and MSCs did not increase ECM production, the two cell types influenced each other and, for example, modulated the staining intensities of type II and type I collagen in comparison to non-zonal constructs under normoxic and hypoxic conditions. In HA-SH/P(AGE-co-G) hydrogel, MSCs produced more ECM than ACPCs, but the ECM was limited to the pericellular region for both cell types. Zonal HASH/P(AGE-co-G) hydrogels resulted in a native-like zonal distribution of ECM as MSCs in the lower zone produced more ECM than ACPCs in the upper zone. It appeared that chondrogenesis of ACPCs was supported by hydrogels without biological attachment sites such as agarose, and that chondrogenesis of MSCs benefited from hydrogels with biological cues like HA. As HA is an attractive material for cartilage tissue engineering, and the HA-based hydrogel HA-SH/P(AGE-co-G) appeared to be beneficial for MSC chondrogenic differentiation, the contribution of HA to chondrogenic gene expression of MSCs was investigated. An upregulation of chondrogenic gene expression was found in 2D monolayer and 3D pellet culture of MSCs in response to HA supplementation, while gene expression of osteogenic and adipogenic transcription factors was not upregulated. MSCs, encapsulated in a HA-based hydrogel, showed upregulation of gene expression for chondrogenic, osteogenic and adipogenic differentiation markers as well as for stemness markers. In a 3D bioprinting process, using the HA-based hydrogel, gene expression levels of MSCs mostly did not change. Nevertheless, expression of three tested genes (COL2A1, SOX2, CD168) was downregulated in printed in comparison to cast constructs, underscoring the importance of closely monitoring cellular behaviour during and after the printing process. In summary, it was confirmed that ACPCs are a promising cell source for articular cartilage engineering with advantages over MSCs when they were cultured in a suitable hydrogel like agarose. The performance of the cells was strongly dependent on the hydrogel environment they were cultured in. The different chondrogenic performance of ACPCs and MSCs in agarose and HA-SH/P(AGE-co-G) hydrogels highlighted the importance of choosing suitable hydrogels for the different cell types used in articular cartilage tissue engineering. Hydrogels with high polymer content, such as the investigated HA-SH/P(AGE-co-G) hydrogels, can limit ECM distribution to the pericellular area and should be developed further towards less polymer content, leading to more homogenous ECM distribution of the cultured cells. The influence of HA on chondrogenic gene expression and on the balance between differentiation and maintenance of stemness in MSCs was demonstrated. More studies should be performed in the future to further elucidate the signalling functions of HA and the effects of 3D bioprinting in HA-based hydrogels. Taken together, the results of this thesis expand the knowledge in the area of articular cartilage engineering with regard to the rational combination of cell types and hydrogel materials and open up new possible approaches to the regeneration of articular cartilage tissue.
Background: Removal of anteriorly located tumors of the upper cervical spine and craniovertebral junction (CVJ) is a particular surgical challenge. Extensive approaches are associated with pain, restricted mobility of neck and head and, in case of foramen magnum and clivus tumors, with retraction of brainstem and cerebellum.
Methods: Four symptomatic patients underwent resection of anteriorly located upper cervical and lower clivus meningiomas without laminotomy or craniotomy using a minimally invasive posterior approach. Distances of natural gaps between C0/C1, C1/C2, and C2/C3 were measured using preoperative CT scans and intraoperative lateral x-rays.
Results: In all patients, safe and complete resection was conducted by the opening of the dura between C0/C1, C1/C2, and C2/C3, respectively. There were no surgical complications. Local pain was reported as very moderate by all patients and postoperative recovery was extremely fast. All tumors had a rather soft consistency, allowing mass reduction prior to removal of the tumor capsule and were well separable from lower cranial nerves and vascular structures.
Conclusion: If tumor consistency is appropriate for careful mass reduction before removal of the tumor capsule and if tumor margins are not firmly attached to crucial structures, then upper cervical, foramen magnum, and lower clivus meningiomas can be safely and completely removed through natural gaps in the CVJ region. Both prerequisites usually become clear early during surgery. Thus, this tumor entity may be planned using this minimally invasive approach and may be extended if tumor consistency turns out to be less unfavorable for resection or if crucial structures cannot be easily separated from the tumor.
Parathyroid carcinoma (PC) is an orphan malignancy accounting for only ~1% of all cases with primary hyperparathyroidism. The localization of recurrent PC is of critical importance and can be exceedingly difficult to diagnose and sometimes futile when common sites of recurrence in the neck and chest cannot be confirmed. Here, we present the diagnostic workup, molecular analysis and multimodal therapy of a 46-year old woman with the extraordinary manifestation of abdominal lymph node metastases 12 years after primary diagnosis of PC. The patient was referred to our endocrine tumor center in 2016 with the aim to localize the tumor causative of symptomatic biochemical recurrence. In view of the extensive previous workup we decided to perform [18F]FDG-PET-CT. A pathological lymph node in the liver hilus showed slightly increased FDG-uptake and hence was suspected as site of recurrence. Selective venous sampling confirmed increased parathyroid hormone concentration in liver veins. Abdominal lymph node metastasis was resected and histopathological examination confirmed PC. Within four months, the patient experienced biochemical recurrence and based on high tumor mutational burden detected in the surgical specimen by whole exome sequencing the patient received immunotherapy with pembrolizumab that led to a biochemical response. Subsequent to disease progression repeated abdominal lymph node resection was performed in 10/2018, 01/2019 and in 01/2020. Up to now (12/2020) the patient is biochemically free of disease. In conclusion, a multimodal diagnostic approach and therapy in an interdisciplinary setting is needed for patients with rare endocrine tumors. Molecular analyses may inform additional treatment options including checkpoint inhibitors such as pembrolizumab.
The occurrence of different subtypes of endogenous Cushing’s syndrome (CS) in single individuals is extremely rare. We here present the case of a female patient who was successfully cured from adrenal CS 4 years before being diagnosed with Cushing’s disease (CD). The patient was diagnosed at the age of 50 with ACTH-independent CS and a left-sided adrenal adenoma, in January 2015. After adrenalectomy and histopathological confirmation of a cortisol-producing adrenocortical adenoma, biochemical hypercortisolism and clinical symptoms significantly improved. However, starting from 2018, the patient again developed signs and symptoms of recurrent CS. Subsequent biochemical and radiological workup suggested the presence of ACTH-dependent CS along with a pituitary microadenoma. The patient underwent successful transsphenoidal adenomectomy, and both postoperative adrenal insufficiency and histopathological workup confirmed the diagnosis of CD. Exome sequencing excluded a causative germline mutation but showed somatic mutations of the β-catenin protein gene (CTNNB1) in the adrenal adenoma, and of both the ubiquitin specific peptidase 8 (USP8) and the glucocorticoid receptor (NR3C1) genes in the pituitary adenoma. In conclusion, our case illustrates that both ACTH-independent and ACTH-dependent CS may develop in a single individual even without evidence for a common genetic background.
A case study on the effect of the employment of two different NHC ligands in complexes [Ni(NHC)\(_{2}\)] (NHC=\(^{i}\)Pr\(_{2}\)Im\(^{Me}\) 1\(^{Me}\), Mes\(_{2}\)Im 2) and their behavior towards alkynes is reported. The reaction of a mixture of [Ni\(_{2}\)(\(^{i}\)Pr\(_{2}\)Im\(^{Me}\))\(_{4}\)(μ-(η\(^{2}\) : η\(^{2}\))-COD)] B/ [Ni(\(^{i}\)Pr\(_{2}\)Im\(^{Me}\))\(_{2}\)(η\(^{4}\)-COD)] B’ or [Ni(Mes\(_{2}\)Im)\(_{2}\)] 2, respectively, with alkynes afforded complexes [Ni(NHC)\(_{2}\)(η\(^{2}\)-alkyne)] (NHC=\(^{i}\)Pr\(_{2}\)Im\(^{Me}\): alkyne=MeC≡CMe 3, H\(_{7}\)C\(_{3}\)C≡CC\(_{3}\)H\(_{7}\) 4, PhC≡CPh 5, MeOOCC≡CCOOMe 6, Me\(_{3}\)SiC≡CSiMe\(_{3}\) 7, PhC≡CMe 8, HC≡CC\(_{3}\)H\(_{7}\) 9, HC≡CPh 10, HC≡C(p-Tol) 11, HC≡C(4-\(^{t}\)Bu-C\(_{6}\)H\(_{4}\)) 12, HC≡CCOOMe 13; NHC=Mes\(_{2}\)Im: alkyne=MeC≡CMe 14, MeOOCC≡CCOOMe 15, PhC≡CMe 16, HC≡C(4-\(^{t}\)Bu-C\(_{6}\)H\(_{4}\)) 17, HC≡CCOOMe 18). Unusual rearrangement products 11 a and 12 a were identified for the complexes of the terminal alkynes HC≡C(p-Tol) and HC≡C(4-\(^{t}\)Bu-C\(_{6}\)H\(_{4}\)), 11 and 12, which were formed by addition of a C−H bond of one of the NHC N-\(^{i}\)Pr methyl groups to the C≡C triple bond of the coordinated alkyne. Complex 2 catalyzes the cyclotrimerization of 2-butyne, 4-octyne, diphenylacetylene, dimethyl acetylendicarboxylate, 1-pentyne, phenylacetylene and methyl propiolate at ambient conditions, whereas 1\(^{Me}\) is not a good catalyst. The reaction of 2 with 2-butyne was monitored in some detail, which led to a mechanistic proposal for the cyclotrimerization at [Ni(NHC)\(_{2}\)]. DFT calculations reveal that the differences between 1\(^{Me}\) and 2 for alkyne cyclotrimerization lie in the energy profile of the initiation steps, which is very shallow for 2, and each step is associated with only a moderate energy change. The higher stability of 3 compared to 14 is attributed to a better electron transfer from the NHC to the metal to the alkyne ligand for the N-alkyl substituted NHC, to enhanced Ni-alkyne backbonding due to a smaller C\(_{NHC}\)−Ni−C\(_{NHC}\) bite angle, and to less steric repulsion of the smaller NHC \(^{i}\)Pr\(_{2}\)Im\(^{Me}\).
In light of the rapidly increasing global demand of energy and the negative effects of climate change, innovative solutions that allow an efficient transition to a carbon-neutral economy are urgently needed. In this context, artificial photosynthesis is emerging as a promising technology to enable the storage of the fluctuating energy of sunlight in chemical bonds of transportable “solar fuels”. Thus, in recent years much efforts have been devoted to the development of robust water oxidation catalysts (WOCs) leading to the discovery of the highly reactive Ru(bda) (bda: 2,2’-bipyridine-6,6’-dicarboxylic acid) catalyst family. The aim of this thesis was the study of chemical and photocatalytic water oxidation with functionalized Ruthenium macrocycles to explore the impact of substituents on molecular properties and catalytic activities of trinuclear macrocyclic Ru(bda) catalysts. A further objective of this thesis comprises the elucidation of factors that influence the light-driven water oxidation process with this novel class of supramolecular WOCs.
The behavior of the redox‐active aminotroponiminate (ATI) ligand in the coordination sphere of bismuth has been investigated in neutral and cationic compounds, [Bi(ATI)\(_{3}\)] and [Bi(ATI)\(_{2}\)L\(_{n}\)][A] (L=neutral ligand; n=0, 1; A=counteranion). Their coordination chemistry in solution and in the solid state has been analyzed through (variable‐temperature) NMR spectroscopy, line‐shape analysis, and single‐crystal X‐ray diffraction analyses, and their Lewis acidity has been evaluated by using the Gutmann–Beckett method (and modifications thereof). Cyclic voltammetry, in combination with DFT calculations, indicates that switching between ligand‐ and metal‐centered redox events is possible by altering the charge of the compounds from 0 in neutral species to +1 in cationic compounds. This adds important facets to the rich redox chemistry of ATIs and to the redox chemistry of bismuth compounds, which is, so far, largely unexplored.
Aspergillus fumigatus causes life-threatening opportunistic infections in immunocompromised patients. As therapeutic outcomes of invasive aspergillosis (IA) are often unsatisfactory, the development of targeted immunotherapy remains an important goal. Linking the innate and adaptive immune system, dendritic cells are pivotal in anti-Aspergillus defense and have generated interest as a potential immunotherapeutic approach in IA. While monocyte-derived dendritic cells (moDCs) require ex vivo differentiation, antigen-pulsed primary myeloid dendritic cells (mDCs) may present a more immediate platform for immunotherapy. To that end, we compared the response patterns and cellular interactions of human primary mDCs and moDCs pulsed with an A. fumigatus lysate and two A. fumigatus proteins (CcpA and Shm2) in a serum-free, GMP-compliant medium. CcpA and Shm2 triggered significant upregulation of maturation markers in mDCs and, to a lesser extent, moDCs. Furthermore, both A. fumigatus proteins elicited the release of an array of key pro-inflammatory cytokines including TNF-α, IL-1β, IL-6, IL-8, and CCL3 from both DC populations. Compared to moDCs, CcpA- and Shm2-pulsed mDCs exhibited greater expression of MHC class II antigens and stimulated stronger proliferation and IFN-γ secretion from autologous CD4\(^+\) and CD8\(^+\) T-cells. Moreover, supernatants of CcpA- and Shm2-pulsed mDCs significantly enhanced the oxidative burst in allogeneic neutrophils co-cultured with A. fumigatus germ tubes. Taken together, our in vitro data suggest that ex vivo CcpA- and Shm2-pulsed primary mDCs have the potential to be developed into an immunotherapeutic approach to tackle IA.
Dendritische Zellen können als antigenpräsentierende Zellen sowohl immunogene als auch tolerogene Funktionen im Immunsystem wahrnehmen und werden in der Therapie von Tumorerkrankungen und Autoimmunerkrankungen eingesetzt. IL-10 gilt als Induktor tolerogener dendritischer Zellen. Diese werden in der Literatur oft als unreif bezeichnet und stehen im Gegensatz zu den reifen immunogenen dendritischen Zellen, die durch die Expression des Reifungsmarkers CD83 gekennzeichnet sind. Ausdifferenzierte dendritische Zellen exprimieren zudem das Antigen CD86, das der T-Zell-Aktivierung dient.
In der vorliegenden Arbeit wurde der Einfluss von IL-10 auf den Reifungsprozess dendritischer Zellen in vitro untersucht. Zur Generierung unreifer dendritischer Zellen wurden humane Monozyten nach etabliertem Protokoll mit IL-4 und GM-CSF stimuliert. Nach anschließender IL-10-Stimulation, insbesondere in Kombination mit einem TLR-Agonisten, bildeten sich zwei exklusive Zellpopulationen: eine CD14+ Population und eine CD83+ Population. Unreife CD14-CD83- dendritische Zellen reexprimierten einerseits CD14 oder exprimierten andererseits CD83. Dabei zeigte sich, dass das kostimulierende Antigen CD86 gleichermaßen sowohl mit als auch ohne IL-10-Inkubation hoch exprimiert wurde und IL-10 folglich keinen zusätzlichen Einfluss auf dessen Expression hat. Insgesamt waren Veränderungen bezüglich der Oberflächenantigene, die bei der Betrachtung der Gesamtheit aller Zellen auffallen, auf eine quantitative Verschiebung der beiden Zellpopulationen zurückzuführen. IL-10 beeinflusst also nicht direkt einzelne kostimulierende oder inhibitorische Moleküle, sondern beeinflusst den Anteil der CD14+ Zellen gegenüber den CD83+ dendritischen Zellen. Funktionell betrachtet zeigten die CD14+ Zellen eine gesteigerte Makropinozytose im Gegensatz zu den reifen CD83+ dendritischen Zellen.
Zusammenfassend führt IL-10 zu einer Reexpression von CD14 auf unreifen dendritischen Zellen und aktiviert einen alternativen Differenzierungsweg. Die CD14+ Zellen weisen einen stabilen immunregulatorischen Phänotyp auf und unterscheiden sich somit von reifen dendritischen Zellen, die nach Inkubation mit IL-10 nicht reguliert werden. Damit muss die Begrifflichkeit und Klassifikation tolerogener dendritischer Zellen weiter diskutiert werden.
Juvenile idiopathic arthritis (JIA) encompasses a heterogeneous group of diseases. The appearance of antinuclear antibodies (ANAs) in almost half of the patients suggests B cell dysregulation as a distinct pathomechanism in these patients. Additionally, ANAs were considered potential biomarkers encompassing a clinically homogenous subgroup of JIA patients. However, in ANA+ JIA patients, the site of dysregulated B cell activation as well as the B cell subsets involved in this process is still unknown. Hence, in this cross-sectional study, we aimed in an explorative approach at characterizing potential divergences in B cell differentiation in ANA+ JIA patients by assessing the distribution of peripheral blood (PB) and synovial fluid (SF) B cell subpopulations using flow cytometry. The frequency of transitional as well as switched-memory B cells was higher in PB of JIA patients than in healthy controls. There were no differences in the distribution of B cell subsets between ANA- and ANA+ patients in PB. However, the composition of SF B cells was different between ANA- and ANA+ patients with increased frequencies of CD21\(^{lo/−}\)CD27\(^−\)IgM\(^−\) “double negative” (DN) B cells in the latter. DN B cells might be a characteristic subset expanding in the joints of ANA+ JIA patients and are potentially involved in the antinuclear immune response in these patients. The results of our explorative study might foster further research dissecting the pathogenesis of ANA+ JIA patients.
The comet assay is widely used in basic research, genotoxicity testing, and human biomonitoring. However, interpretation of the comet assay data might benefit from a better understanding of the future fate of a cell with DNA damage. DNA damage is in principle repairable, or if extensive, can lead to cell death. Here, we have correlated the maximally induced DNA damage with three test substances in TK6 cells with the survival of the cells. For this, we selected hydrogen peroxide (H\(_{2}\)O\(_{2}\)) as an oxidizing agent, methyl methanesulfonate (MMS) as an alkylating agent and etoposide as a topoisomerase II inhibitor. We measured cell viability, cell proliferation, apoptosis, and micronucleus frequency on the following day, in the same cell culture, which had been analyzed in the comet assay. After treatment, a concentration dependent increase in DNA damage and in the percentage of non-vital and apoptotic cells was found for each substance. Values greater than 20-30% DNA in tail caused the death of more than 50% of the cells, with etoposide causing slightly more cell death than H\(_{2}\)O\(_{2}\) or MMS. Despite that, cells seemed to repair of at least some DNA damage within few hours after substance removal. Overall, the reduction of DNA damage over time is due to both DNA repair and death of heavily damaged cells. We recommend that in experiments with induction of DNA damage of more than 20% DNA in tail, survival data for the cells are provided.
Background: Phosphodiesterases (PDE) critically regulate myocardial cAMP and cGMP levels. PDE2 is stimulated by cGMP to hydrolyze cAMP, mediating a negative crosstalk between both pathways. PDE2 upregulation in heart failure contributes to desensitization to β-adrenergic overstimulation. After isoprenaline (ISO) injections, PDE2 overexpressing mice (PDE2 OE) were protected against ventricular arrhythmia. Here, we investigate the mechanisms underlying the effects of PDE2 OE on susceptibility to arrhythmias. Methods: Cellular arrhythmia, ion currents, and Ca\(^{2+}\)-sparks were assessed in ventricular cardiomyocytes from PDE2 OE and WT littermates. Results: Under basal conditions, action potential (AP) morphology were similar in PDE2 OE and WT. ISO stimulation significantly increased the incidence of afterdepolarizations and spontaneous APs in WT, which was markedly reduced in PDE2 OE. The ISO-induced increase in I\(_{CaL}\) seen in WT was prevented in PDE2 OE. Moreover, the ISO-induced, Epac- and CaMKII-dependent increase in I\(_{NaL}\) and Ca\(^{2+}\)-spark frequency was blunted in PDE2 OE, while the effect of direct Epac activation was similar in both groups. Finally, PDE2 inhibition facilitated arrhythmic events in ex vivo perfused WT hearts after reperfusion injury. Conclusion: Higher PDE2 abundance protects against ISO-induced cardiac arrhythmia by preventing the Epac- and CaMKII-mediated increases of cellular triggers. Thus, activating myocardial PDE2 may represent a novel intracellular anti-arrhythmic therapeutic strategy in HF.
Neisseria gonorrhoeae are Gram-negative bacteria with diplococcal shape. As an obligate human pathogen, it is the causative agent of gonorrhoea, a sexually transmitted disease. Gonococci colonize a variety of mucosal tissues, mainly the urogenital tract in men and women. Occasionally N. gonorrhoeae invades the bloodstream, leading to disseminated gonococcal infection. These bacteria possess a repertoire of virulence factors, which expression patterns can be adapted to the environmental conditions of the host. Through the accumulation of antibiotic resistances and in absence of vaccines, some neisserial strains have the potential to spread globally and represent a major public health threat. Therefore, it is necessary to understand the exact molecular mechanisms underlying the successful infection and progression of gonococci within their host. This deeper understanding of neisserial infection and survival mechanisms is needed for the development of new therapeutic agents.
In this work, the role of host-cell sphingolipids on the intracellular survival of N. gonorrhoeae was investigated. It was shown that different classes of sphingolipids strongly interact with invasive gonococci in epithelial cells. Therefore, novel and highly specific clickable sphingolipid analogues were applied to study these interactions with this pathogen. The formation of intra- and extracellular sphingosine vesicles, which were able to target gonococci, was observed. This direct interaction led to the uptake and incorporation of sphingosine into the neisserial membrane. Together with in vitro results, sphingosine was identified as a potential bactericidal reagent as part of the host cell defence. By using different classes of sphingolipids and their clickable analogues, essential structural features, which seem to trigger the bacterial uptake, were detected. Furthermore, effects of key enzymes of the sphingolipid signalling pathway were tested in a neutrophil infection model.
In conclusion, the combination of click chemistry and infection biology made it possible to shed some light on the dynamic interplay between cellular sphingosine and N. gonorrhoeae. Thereby, a possible “catch-and-kill” mechanism could have been observed.
Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem
(2021)
Over the last decades the phase problem in macromolecular x-ray crystallography has become more controllable as methods and approaches have diversified and improved. However, solving the phase problem is still one of the biggest obstacles on the way of successfully determining a crystal structure. To overcome this caveat, we have utilized the anomalous scattering properties of the heavy alkali metal cesium. We investigated the introduction of cesium in form of cesium chloride during the three major steps of protein treatment in crystallography: purification, crystallization, and cryo-protection. We derived a step-wise procedure encompassing a "quick-soak"-only approach and a combined approach of CsCl supplement during purification and cryo-protection. This procedure was successfully applied on two different proteins: (i) Lysozyme and (ii) as a proof of principle, a construct consisting of the PH domain of the TFIIH subunit p62 from Chaetomium thermophilum for de novo structure determination. Usage of CsCl thus provides a versatile, general, easy to use, and low cost phasing strategy.
Mindfulness is considered an important factor of an individual's subjective well-being. Consequently, Human-Computer Interaction (HCI) has investigated approaches that strengthen mindfulness, i.e., by inventing multimedia technologies to support mindfulness meditation. These approaches often use smartphones, tablets, or consumer-grade desktop systems to allow everyday usage in users' private lives or in the scope of organized therapies. Virtual, Augmented, and Mixed Reality (VR, AR, MR; in short: XR) significantly extend the design space for such approaches. XR covers a wide range of potential sensory stimulation, perceptive and cognitive manipulations, content presentation, interaction, and agency. These facilities are linked to typical XR-specific perceptions that are conceptually closely related to mindfulness research, such as (virtual) presence and (virtual) embodiment. However, a successful exploitation of XR that strengthens mindfulness requires a systematic analysis of the potential interrelation and influencing mechanisms between XR technology, its properties, factors, and phenomena and existing models and theories of the construct of mindfulness. This article reports such a systematic analysis of XR-related research from HCI and life sciences to determine the extent to which existing research frameworks on HCI and mindfulness can be applied to XR technologies, the potential of XR technologies to support mindfulness, and open research gaps. Fifty papers of ACM Digital Library and National Institutes of Health's National Library of Medicine (PubMed) with and without empirical efficacy evaluation were included in our analysis. The results reveal that at the current time, empirical research on XR-based mindfulness support mainly focuses on therapy and therapeutic outcomes. Furthermore, most of the currently investigated XR-supported mindfulness interactions are limited to vocally guided meditations within nature-inspired virtual environments. While an analysis of empirical research on those systems did not reveal differences in mindfulness compared to non-mediated mindfulness practices, various design proposals illustrate that XR has the potential to provide interactive and body-based innovations for mindfulness practice. We propose a structured approach for future work to specify and further explore the potential of XR as mindfulness-support. The resulting framework provides design guidelines for XR-based mindfulness support based on the elements and psychological mechanisms of XR interactions.
Pertussis is a highly contagious acute respiratory disease of humans which is mainly caused by the gram-negative obligate human pathogen Bordetella pertussis. Despite the availability and extensive use of vaccines, the disease persists and has shown periodic re-emergence resulting in an estimated 640,000 deaths worldwide in 2014. The pathogen expresses various virulence factors that enable it to modulate the host immune response, allowing it to colonise the ciliated airway mucosa. Many of these factors also directly interfere with host signal transduction systems, causing damage to the ciliated airway mucosa and increase mucous production. Of the many virulence factors of B. pertussis, only the tracheal cytotoxin (TCT) is able to recapitulate the pathophysiology of ciliated cell extrusion and blebbing in animal models and in human nasal biopsies. Furthermore, due to the lack of appropriate human models and donor materials, the role of bacterial virulence factors has been extrapolated from studies using animal models infected with either B. pertussis or with the closely related species B. bronchiseptica which naturally causes respiratory infections in these animals and produces many similar virulence factors. Thus, in the present work, in vitro airway mucosa models developed by co-culturing human airway epithelia cells and fibroblasts from the conduction zone of the respiratory tract on a decellularized porcine small intestine submucosa scaffold (SISser®) were used, since these models have a high correlation to native human conducting zone respiratory epithelia. The major aim was to use the engineered airway mucosa models to elucidate the contribution of B. pertussis TCT in the pathophysiology of the disease as well as the virulence mechanism of B. pertussis in general. TCT and lipopolysaccharide (LPS) either alone or in combination were observed to induce epithelial cell blebbing and necrosis in the in vitro airway mucosa model. Additionally, the toxins induced viscous hyper-mucous secretion and significantly disrupted barrier properties of the in vitro airway mucosa models. This work also sought to assess the invasion and intracellular survival of B. pertussis in the polarised epithelia, which has been critically discussed for many years in the literature. Infection of the models with B. pertussis showed that the bacteria can adhere to the models and invade the epithelial cells as early as 6 hours post inoculation. Invasion and intracellular survival assays indicated the bacteria could invade and persist intracellularly in the epithelial cells for up to 3 days. Due to the novelty of the in vitro airway mucosa models, this work also intended to establish a method for isolating individual cells for scRNA-seq after infection with B. pertussis. Cold dissociation with Bacillus licheniformis subtilisin A was found to be capable of dissociating the cells without inducing a strong fragmentation, a problem which occurs when collagenase and trypsin/EDTA are used. In summary, the present work showed that TCT acts possibly in conjunction with LPS to disrupt the human airway mucosa much like previously shown in the hamster tracheal ring models and thus appears to play an important role during the natural B. pertussis infection. Furthermore, we established a method for infecting and isolating infected cells from the airway mucosa models in order to further investigate the effect of B. pertussis infection on the different cell populations in the airway by single cell analytics in the future.