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- Graduate School of Life Sciences (81)
- Theodor-Boveri-Institut für Biowissenschaften (80)
- Universität - Fakultätsübergreifend (47)
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Schriftenreihe
Sonstige beteiligte Institutionen
- Johns Hopkins School of Medicine (15)
- Johns Hopkins University School of Medicine (5)
- Department of Biomedical Imaging, National Cerebral and Cardiovascular Research Center, Suita, Japan (2)
- Division of Medical Technology and Science, Department of Medical Physics and Engineering, Course of Health Science, Osaka University Graduate School of Medicine, Suita Japan (2)
- Institut for Molecular Biology and CMBI, Department of Genomics, Stem Cell Biology and Regenerative Medicine, Leopold-Franzens-University Innsbruck, Innsbruck, Austria (2)
- International Max Planck Research School Molecular Biology, University of Göttingen, Germany (2)
- Johns Hopkins School of Medicine, The Russell H Morgan Department of Radiology and Radiological Science, Baltimore, MD, USA (2)
- Universitätsklinikum Würzburg (2)
- ACC GmbH Analytical Clinical Concepts (1)
- Abteilung für Molekulare Onkoimmunologie (1)
ResearcherID
- J-8841-2015 (1)
Im Rahmen dieser Arbeit konnten, ausgehend von Borat-haltigen Salzen und ionischen Flüssigkeiten (ILs) sowie Lanthanid-haltigen Precursoren, 30 neue Komplexe und Koordinationspolymere dargestellt werden. Dazu wurden vielfältige Synthesestrategien verfolgt und angewendet, unter anderem Salzmetathesen in Lösung, Solvothermalsynthesen und Ionothermalsynthesen. Ein Hauptaugenmerk bei der Synthese der Zielverbindungen lag auf deren Eigenschaften, wobei insbesondere die Photolumineszenzeigenschaften der erhaltenen Koordinationsverbindungen untersucht wurden. Als Borat-haltige Liganden wurden sowohl Cyanoborate als auch Oxoborate hinsichtlich ihrer Eignung zum Aufbau neuer Koordinationspolymere untersucht. Als Cyanoborat-haltige Edukte wurden dabei Säuren und ionische Flüssigkeiten mit Dicyano-, Tricyano- und Tetracyanoborat- Anionen eingesetzt, die durch die unterschiedliche Zahl an Cyanogruppen zu vielfältigen Koordinationsverbindungen führen können. Mittels Ionothermalsynthese konnten die Verbindungen 1∞[Ln(NO3)2{B(CN)4}(H2O)4] (Ln = La, Eu) sowie [EMIm]1∞[LaNO3{B(CN)4}3(H2O)3] dargestellt werden, wobei es zu einer Transformation der ionischen Flüssigkeit [EMIm][B(CN)4] in ein Koordinationspolymer kommt, in dem sowohl Kation als auch Anion der IL beteiligt sind. Dabei ist es bemerkenswerterweise durch die Reaktionstemperatur möglich zu steuern, welches Produkt sich letztlich bildet. Ebenfalls durch Ionothermalsynthese gelang die Synthese von Einkristallen der Verbindung 3∞[La{C2F5B(CN)3}3], durch deren Kenntnis die Verbindungen 3∞[Ln{C2F5B(CN)3}3](Ln = Eu, Ho) als isotype Strukturen identifiziert und hinsichtlich ihrer Lumineszenzeigenschaften charakterisiert werden konnten. Durch Umsetzungen der Lanthanidchloride mit der Säure H[BH2(CN)2] in Solvothermalsynthesen in Pyridin (py) konnten eindimensionale Koordinationspolymere [H(py)2]1∞[LnCl2{BH2(CN)2}2(py)2]·0.5py (Ln = Ce, Pr) erhalten werden. Unter vergleichbaren Synthesebedingungen aber im Lösungsmittel MeCN beobachtet man hingegen die Bildung von Raumnetzen der Zusammensetzung 3∞[Ln2{BH2(CN)2}9]·[Ln(CH3CN)9] (Ln = Ce, Eu, Tb). Die dreidimensionalen Koordinationspolymere 3∞[Ln{BH(CN)3}3] (Ln = Eu, Tb) wurden ebenfalls in MeCN synthetisiert, allerdings ausgehend von der Säure [H3O][BH(CN)3]. Die erwähnten Verbindungen zeigen für die spektroskopisch relevanten Vertreter charakteristische Lumineszenz auf Basis von 5d-4f- respektive 4f-4f-Übergängen, die überwiegend auf der direkten Anregung der jeweiligen Lanthanidionen beruht. Mit dem Bis-salicylatoborat-Anion (= BSB−) gelang ausgehend von Na[BSB] und LnCl3 unter solvothermalen Bedingungen in Pyridin die Synthese der eindimensionalen, strangartigen Koordinationspolymere 1∞[Ln(BSB)3(py)2] (Ln = Y, La – Nd, Sm) und der zweidimensionalen, schichtartigen Verbindungen 2∞[Ln(BSB)3(py)] (Ln = Sm, Eu, Tb – Er). Einblicke über den Mechanismus der Bildung der genannten Verbindungen konnten durch den Komplex [ErCl2(py)4BSB] gewonnen werden, der eine sukzessive Substitution der Chlorid-Liganden nachweist. Die Verbindungen mit dem [BSB]−-Anion zeigen Photolumineszenz, die auf unterschiedliche Prozesse zurückgeführt werden kann. So weist 1∞[Y(BSB)3(py)2] Fluoreszenz auf, die von den [BSB]−-Anionen herrührt, während 1∞[Ln(BSB)3(py)2] (Ln = Ce, Nd, Sm) sowie 2∞[Ln(BSB)3(py)] (Ln = Sm, Tb, Dy) Lumineszenz auf Basis von 5d-4f- und 4f-4f-Übergängen zeigen, die durch einen Antenneneffekt der koordinierenden [BSB]−-Anionen vergleichsweise intensiv beobachtet werden können. Eine Sonderstellung nehmen hier die Verbindungen 2∞[Ln(BSB)3(py)] (Ln = Eu, Ho) ein. Während mit Eu3+ überwiegend direkte Anregung festgestellt werden kann, treten für Ho3+ Reabsorptionsprozesse auf. Durch Kombination unterschiedlicher Gehalte an Eu3+- bzw. Tb3+-Ionen in den eindimensionalen Koordinationspolymeren 1∞[EuxTb1−x(BSB)3(py)2] (x = 0.75, 0.50, 0.25) können zudem Mischfarben der Lumineszenz erzeugt werden. Mit dem Komplex [B2O(C2O4)2(dmf)2] (dmf = Dimethylformamid) und dem Koordinationspolymer 1∞[Tb{o-C6H4(CO2)2}(H2O)6][PHB]2 (PHB− = Phthalatoborat) konnte zudem die Sonderstellung des [BSB]−-Anions deutlich gemacht werden, da es als einziges untersuchtes Spiroborat-Anion vollständig in Zielverbindungen eingebaut werden konnte, während vergleichbare Spiroborat-Anionen wie das [PHB]−-Anion in Gegenwart Lewis-acider Verbindungen hingegen die Abspaltung funktioneller Gruppen zeigten. Insgesamt konnten in dieser Arbeit somit zahlreiche neue, lumineszierende Koordinationspolymere mit Cyano- und Oxoboraten erfolgreich dargestellt werden.
Poly(A)-binding proteins (PABPs) regulate mRNA fate by controlling stability and translation through interactions with both the poly(A) tail and eIF4F complex. Many organisms have several paralogs of PABPs and eIF4F complex components and it is likely that different eIF4F/PABP complex combinations regulate distinct sets of mRNAs. Trypanosomes have five eIF4G paralogs, six of eIF4E and two PABPs, PABP1 and PABP2. Under starvation, polysomes dissociate and the majority of mRNAs, most translation initiation factors and PABP2 reversibly localise to starvation stress granules. To understand this more broadly we identified a protein interaction cohort for both T. brucei PABPs by cryo-mill/affinity purification-mass spectrometry. PABP1 very specifically interacts with the previously identified interactors eIF4E4 and eIF4G3 and few others. In contrast PABP2 is promiscuous, with a larger set of interactors including most translation initiation factors and most prominently eIF4G1, with its two partners TbG1-IP and TbG1-IP2. Only RBP23 was specific to PABP1, whilst 14 RNA-binding proteins were exclusively immunoprecipitated with PABP2. Significantly, PABP1 and associated proteins are largely excluded from starvation stress granules, but PABP2 and most interactors translocate to granules on starvation. We suggest that PABP1 regulates a small subpopulation of mainly small-sized mRNAs, as it interacts with a small and distinct set of proteins unable to enter the dominant pathway into starvation stress granules and localises preferentially to a subfraction of small polysomes. By contrast PABP2 likely regulates bulk mRNA translation, as it interacts with a wide range of proteins, enters stress granules and distributes over the full range of polysomes.
Ziel dieser Arbeit war die Herstellung fluoreszent markierter Präpolymere sowie deren Optimierung, die kontrollierte und reproduzierbare Synthese von redox-sensitiven und nicht redox-sensitiven NG mit und ohne Fluoreszenzmarkierung in einem durchschnittlichen Partikelgrößenbereich von 150 – 300 nm und mit einer Konzentration > 10*10 Partikel/ml, die Charakterisierung der NG, ihre Untersuchung bezüglich ihrer Stabilität und des Assoziationsverhaltens zu BSA sowie die Erlangung von Erkenntnissen bezüglich des Aufnahmemechanismus der NG in Abhängigkeit vom Transportpeptid Tat.
Abschließend kann zusammenfassend gesagt werden:
1. Das große Potential von PG-basierten NG für biologische bzw. medizinische Einsatzgebiete konnte weiter untermauert werden.
2. Das mit Cy5-Alkin markierte PG PG-SH-Cy5 erscheint aufgrund des relativ hohen erreichten Markierungsgrades bei der Herstellung als aussichtsreichster Kandidat für weitere Untersuchungen. Diese Umsetzung besitzt noch Optimierungspotentiale bezüglich einer Verringerung des Polymerverlusts bei der Aufarbeitung, des erreichbaren Markierungsgrades und der Markierungsausbeute. Möglichkeiten, dies zu erreichen, wurden diskutiert.
3. Klare Aussagen über den Einfluss des esterhaltigen bzw. esterfreien Ausgangspolymers PG-SH auf die Konzentration und die Partikelgröße konnten aufgrund einer nicht ausreichenden Datenlage nicht getroffen werden.
4. Die esterhaltigen PG-SH-Moleküle erscheinen aufgrund ihrer Labilität gegenüber Hydrolyse für die NP-Synthese weniger geeignet (geringere Stabilität).
5. Die Charakterisierung der aus den markierten und unmarkierten Ausgangspolymeren hergestellten NG, welche teilweise zusätzlich mit dem Transportpeptid Tat funktionalisiert wurden, erfolgte mittels NTA und zeigt für die meisten Spezies relativ schmale, gut definierte, monomodale Größenverteilungen mit einem Maximum um 100-200 nm im Bereich von ca. 40 – max. 400 nm mit Partikelkonzentrationen im Bereich von 1010 - 1011 Partikeln/ml.
6. Insgesamt konnte gezeigt werden, dass der untersuchte, von PG-SH abgeleitete NP-Typ (z. B. NG_3, redox-sensitiv unmarkiert) aufgrund seiner Einheitlichkeit, Partikelgröße und der Reproduzierbarkeit der Herstellung als gut geeignet für den geplanten Einsatz in biologischen Systemen erscheint. Von den weiter derivatisierten NG erscheinen die folgenden aufgrund der oben geschilderten Kriterien als besonders geeignet für den geplanten Einsatz in biologischen Systemen und weiterer Untersuchungen wert: NG680_(TAT)_1-4 (redox-sensitiv, markiert), NGCy5_(TAT)_1 (redox-sensitiv, markiert), NG_MA_2 (nicht redox-sensitiv, unmarkiert), NGCy7_MA_1 (nicht redox-sensitiv, markiert). Aufgrund des relativ hohen erreichbaren Markierungsgrades bei der Markierung der Ausgangspolymere erscheinen die mit Cy5-markierten Verbindungen als besonders vorteilhaft.
7. Die esterfreien, redox-sensitiven NP erwiesen sich bei 14-tägiger Lagerung unter physiologischen Bedingungen als stabil. Ihre Konzentration nahm über 14 Tage um ca. 60 % vom Ausgangswert ab. Gleichzeitig nahm der Teilchendurchmesser während des Beobachtungszeitraums um ca. 25 % zu. Die Abnahme der Teilchenzahl ist - zumindest teilweise - durch eine Vergrößerung des mittleren Teilchendurchmessers und mögliche Adsorptionseffekte an die Gefäßwände des Versuchsaufbaus zu erklären.
8. Die Konzentration der esterfreien, nicht redox-sensitiven NP verringert sich bei 14-tägiger Inkubation unter physiologischen Bedingungen deutlich auf ca. 10 % des Ausgangswerts. Der mittlere Durchmesser der Partikel bleibt innerhalb des Untersuchungszeitraums innerhalb der Fehlergrenzen konstant. Die starke Abnahme der Partikelkonzentration ist wahrscheinlich auf die Hydrolyse des verwendeten esterhaltigen Crosslinkers PEGDA zurückzuführen. Desweiteren sind Adsorptionsphänomene an Oberflächen des Versuchsaufbaus nicht auszuschließen. Insgesamt hervorzuheben ist die wesentlich höhere Stabiliät der redox-sensitiven NP unter den Versuchsbedingungen. Diese Substanzklasse sollte daher weiter verfolgt werden.
9. Es wurde gezeigt, dass sowohl die NG, die das Aufnahmeprotein Tat enthalten, als auch die NG ohne Tat mit Fluoreszenz-markiertem BSA (8,3 µg/ml) wechselwirken und zusammen mit diesem bei der Zentrifugation abgeschieden werden. Über die Art der Wechselwirkung kann keine Aussage getroffen werden.
10. Durch in vitro Zellaufnahmeuntersuchungen an Hela-Zellen konnte gezeigt werden, dass die mit Tat funktionalisierten, redox-sensitiven, Fluoreszenz-markierten NP von den Zellen aufgenommen werden. Die Aufnahme erfolgt über eine deutlich erkennbare Vesikelbildung, die an der Plasmamembran verstärkt beobachtet werden kann. Im Gegensatz hierzu konnte bei den nicht mit Tat funktionalisierten NP keine vergleichbare in vitro Zellaufnahme beobachtet werden.
Die Ergebnisse dieser Arbeit bestätigen insgesamt das große Potential der von Thiol-funktionalisierten PG abgeleiteten NG für die medizinische Forschung und zukünftige Anwendungen in der Diagnostik und Therapie. Es wird eine Reihe von Ansatzpunkten aufgezeigt, auf deren Basis weitere vertiefende Untersuchungen zur Charakterisierung und Optimierung sowie zu zukünftigen nutzbringenden Anwendungen vorgenommen werden sollten.
Gegenstand dieser Studie ist die Untersuchung von unterschiedlichen Osteosynthesemöglichkeiten bei Tibiakopfimpressionsfrakturen am Kunstknochen. Dafür wurde ein Kunstknochenmodell ausgesucht, das in seinen mechanischen Eigenschaften einem humanen, osteoporotischen Knochen nahe kommt. Nachdem die Knochen in neun Gruppen aufgeteilt wurden, wurde eine Impressionsfraktur des lateralen Tibiaplateaus generiert, um diese anschließend mit verschiedenen Osteosynthesetechniken zu versorgen. Zur biomechanischen Testung der Stabilität wurden die Knochen über 3000 Zyklen mit 250 N belastet. Abschließend erfolgte in einer Load-to-failure-Testung die Prüfung der maximalen Belastbarkeit.
Der erste Teil dieser Studie konnte zeigen, dass es in Bezug auf das initiale Einsinken des Frakturfragmentes und die Steifigkeit der Osteosynthesetechnik von entscheidender Bedeutung ist, den Knochendefekt bis direkt unter das Impressionsfragment mit Kalziumphosphatzement aufzufüllen. Das ist nur möglich, wenn der Zement gebohrt werden kann und somit die Auffüllung vor der Schraubenosteosynthese möglich ist. Andernfalls behindern die Schrauben die optimale Unterfütterung des Defektes. Auf die maximale Belastbarkeit hat die Auffülltechnik keinen Einfluss.
Die Ergebnisse des zweiten Studienteils zeigen, dass die alleinige Versorgung der Fraktur mit chronOs Inject® keine ausreichende Stabilität bietet. In der Gesamtschau der Messergebnisse und dem Verhalten der Knochen während der Load-to-failure-Phase schneidet die Versorgung mit der Jail-Technik und chronOs Inject® (Gruppe 7) am besten ab.
Bei dem Vergleich der mechanischen Eigenschaften der beiden verwendeten Kalziumphosphatzemente Norian Drillable® und chronOs Inject® in Ziel 3 der Studie schneidet der nicht bohrbare Zement chronOs Inject® im Displacement und der Steifigkeit besser ab. Dabei muss bedacht werden, dass Norian Drillable® als bohrbarer Knochenzement seine entscheidende Fähigkeit nicht ausspielen konnte.
Grundsätzlich ist zu sagen, dass die optimale Behandlung einer Tibiakopfimpressionsfraktur zwei Bedingungen erfüllen muss. Einerseits muss sie der vom Patienten einzuhaltenden Teilbelastung in der postoperativen Phase standhalten (zyklische Belastung), andererseits muss sie auch stabil genug sein, um bei einer maximalen Belastung nicht zu versagen (Load-to-failure-Testung).
Zur Vermeidung eines Repositionsverlustes ist es bedeutsam, den entstandenen Knochendefekt mit einem Knochenersatzmaterial aufzufüllen. Entscheidend dabei ist es, dass das Material auch tatsächlich bis unterhalb des Fragmentes gefüllt wird. Ist das nicht der Fall, verfällt der positive Effekt auf das Displacement. Wird der Knochen mit einer maximalen Kraft belastet, ist es für das Ergebnis ausschlaggebend, dass die Fraktur verplattet oder verschraubt ist.
Die Studienergebnisse weisen die Verschraubung der Fraktur in der Jail-Technik in Kombination mit dem bohrbaren Kalziumphosphatzement Norian Drillable® als momentan beste Versorgungstechnik für Tibiakopfimpressionsfrakturen aus.
Limitiert wird die Studie durch die Verwendung von Kunstknochen und den Versuchsaufbau, da die tatsächlichen Verhältnisse im biologischen System nicht widergespiegelt werden. Aber es lässt sich zeigen, dass sich zum Zweck von biomechanischen Analysen der Tibiakopfimpressionsfraktur dieser Frakturtyp standardisiert hervorrufen lässt. Auch das Kriterium der Reproduzierbarkeit kann erfüllt werden.
In der vorliegenden Arbeit wurde angestrebt, die Eigenschaften komplexgekoppelter DFB-Laser bezüglich ihrer Nutzung für metrologische Untersuchungen zu analysieren und zu verbessern.
Hierfür wurden die räumlichen Emissionseigenschaften der lateral komplexgekoppelten DFB-Laser in ausgiebigen Studien diskutiert. Für kommerziell erhältliche Laser wurde daraufhin das Fernfeld sowohl in lateraler als auch vertikaler Richtung berechnet. Die entsprechenden Fernfeldmessungen konnten die Theorie bestätigen und wie erwartet, waren die Divergenzwinkel mit 52° FWHM in der Wachstumsrichtung und 12° FWHM in lateraler Richtung (vgl. Abb. 6.4 und 6.5) sehr unterschiedlich und zeugen von einer großen Differenz in den Fernfeldwinkeln. Mit Überlegungen zu dem optischen bzw. elektrischen Einschlusspotential im Hinblick auf die veränderte Fernfeldsituation wurde zunächst die reine Halbleiterlaserschichtfolge optimiert. Der Divergenzwinkel in Wachstumsrichtung wurde um mehr als 50% auf 25° FWHM gesenkt. Damit konnte die Asymmetrie des Fernfeldes um einen Faktor von mehr als 4 reduziert werden. Strahlgüteuntersuchungen zeigten ein nahezu beugungsbegrenztes Gaußsches Strahlprofil in der langsamen Achse mit einem M2-Wert von 1,13 (Abb. 6.3).
Eine weitere Untersuchung betraf die Linienbreitenabhängigkeit solcher Laser von ihrer Ausgangsleistung, der Resonatorlänge, der Facettenvergütung und der Gitterkopplung. Die erste Beobachtung betraf die Verschmälerung der Linienbreite mit ansteigender Ausgangsleistung bis hin zu einer erneuten Verbreiterung (Rebroadening) der Linienbreite (siehe Abb. 7.3). Der Einfluss auf die Linienbreite durch eine Veränderung der Resonatorlänge ließ sich sehr gut mit der Theorie vergleichen und so erbrachte eine Verdopplung der Resonatorlänge eine Verschmälerung der Linienbreite um mehr als einen Faktor 3. Die Verlängerung der Kavität begünstigte den negativen Effekt des sog. Rebroadenings nicht, da bei der verwendeten Technologie der lateral komplexen Kopplung der Index-Beitrag an der Rückkopplung sehr klein ist. Im Falle reiner Indexkopplung wäre dies durch die veränderte κ · L-Lage deutlich zu spüren. Ein weiterer, oben auch angesprochener Vorteil der komplexen Kopplung ist, dass die Facettenreflektivitäten einen wesentlich kleineren Einfluss auf die DFB-Ausbeute und auf deren Eigenschaften haben als bei der reinen Indexkopplung. Dies lässt sich ausnutzen, um die Photonenlebensdauer in der Kavität zu erhöhen ohne negativ die DFB-Ausbeute zu beeinflussen. In dieser Arbeit wurde bei verschiedenen Längen die reine gebrochene Facette mit einer vergüteten verglichen und der Einfluss auf die Linienbreite analysiert. Die Frontfacette wurde durch eine Passivierung bei ca. 30% gehalten und die Rückfacette durch einen doppelten Reflektor auf ca. 85% gesetzt. Daraus resultierte eine Reduktion der Linienbreite um mehr als die Hälfte.
Neben diesen Ergebnissen wurde auch der Einfluss der komplexen Kopplung untersucht. Da die durch das Gitter zusätzlich eingebrachten Verluste zu einer Vergrößerung der Linienbreiten beitragen, wird bei einem größeren geometrischen Gitterüberlapp das Frequenzrauschen auch entsprechend steigen. Dies ließ sich auch im Experiment bestätigen.
Zudem wurde eine Längenabhängigkeit dieses Effektes festgestellt. Die Reduzierung der Linienbreite bei längeren Bauteilen ist deutlich ausgeprägter als bei kürzeren. So ist bei ähnlicher Verringerung des Gitterüberlappes bei einem 900 μm langen Bauteil eine Linienbreitenreduzierung um einen Faktor von „nur“ 1,85 beobachtbar, aber bei der doppelten Kavitätslänge ist dieser Faktor schon auf 3,60 angestiegen.
Im Rahmen dieser Arbeit wurden DFB-Laser hergestellt, die eine Linienbreite von bis zu 198 kHz aufwiesen. Dies stellt für lateral komplexgekoppelte Laser einen absoluten Rekordwert dar. Im Vergleich zu Index-DFB-Lasern ist dieser Wert bzgl. der Linienbreite mit den aktuellsten Ergebnissen aus der Forschung zu vergleichen [CTR+11], bei welchen eine Linienbreite zu 200 kHz bestimmt wurde.
In dem letzten Abschnitt dieser Arbeit wurde der Einfluss einer veränderten Phasenlage von Gitter und Facette untersucht. Dabei wurden spezielle Bauteile hergestellt (3-Segment-DFB-Laser) und verschiedene Gitterlängen untersucht. Die Phasenlage kann reversibel über den eingestellten Strom in den gitterfreien Segmenten geregelt werden. Wie vorhergesagt, bestätigen die Experimente, dass diese Phasenbeziehung einen signifikanten Einfluss auf die Ausgangsleistung, die Wellenlänge mit ihrer zugehörigen Seitenmodenunterdrückung und auch auf die Linien-breite hat. Bei der Analyse der Linienbreite konnte eindeutig beobachtet werden, dass für die verschiedenen Längen die inverse Linienbreite sehr gut mit der relativen Seitenmodenunterdrückung gekoppelt ist. Dies stellt eine deutliche Erleichterung der zukünftigen Optimierung der komplexgekoppelten DFB-Laser dar, da eine Linienbreitenuntersuchung meist deutlich zeitaufwendiger ist als eine Analyse mit einem optischen Spektrometer.
Semantic Fusion for Natural Multimodal Interfaces using Concurrent Augmented Transition Networks
(2018)
Semantic fusion is a central requirement of many multimodal interfaces. Procedural methods like finite-state transducers and augmented transition networks have proven to be beneficial to implement semantic fusion. They are compliant with rapid development cycles that are common for the development of user interfaces, in contrast to machine-learning approaches that require time-costly training and optimization. We identify seven fundamental requirements for the implementation of semantic fusion: Action derivation, continuous feedback, context-sensitivity, temporal relation support, access to the interaction context, as well as the support of chronologically unsorted and probabilistic input. A subsequent analysis reveals, however, that there is currently no solution for fulfilling the latter two requirements. As the main contribution of this article, we thus present the Concurrent Cursor concept to compensate these shortcomings. In addition, we showcase a reference implementation, the Concurrent Augmented Transition Network (cATN), that validates the concept’s feasibility in a series of proof of concept demonstrations as well as through a comparative benchmark. The cATN fulfills all identified requirements and fills the lack amongst previous solutions. It supports the rapid prototyping of multimodal interfaces by means of five concrete traits: Its declarative nature, the recursiveness of the underlying transition network, the network abstraction constructs of its description language, the utilized semantic queries, and an abstraction layer for lexical information. Our reference implementation was and is used in various student projects, theses, as well as master-level courses. It is openly available and showcases that non-experts can effectively implement multimodal interfaces, even for non-trivial applications in mixed and virtual reality.
Forest biodiversity conservation requires precise, area-wide information on the abundance and distribution of key habitat structures at multiple spatial scales. We combined airborne laser scanning (ALS) data with color-infrared (CIR) aerial imagery for identifying individual tree characteristics and quantifying multi-scale habitat requirements using the example of the three-toed woodpecker (Picoides tridactylus) (TTW) in the Bavarian Forest National Park (Germany). This bird, a keystone species of boreal and mountainous forests, is highly reliant on bark beetles dwelling in dead or dying trees. While previous studies showed a positive relationship between the TTW presence and the amount of deadwood as a limiting resource, we hypothesized a unimodal response with a negative effect of very high deadwood amounts and tested for effects of substrate quality. Based on 104 woodpecker presence or absence locations, habitat selection was modelled at four spatial scales reflecting different woodpecker home range sizes. The abundance of standing dead trees was the most important predictor, with an increase in the probability of TTW occurrence up to a threshold of 44–50 dead trees per hectare, followed by a decrease in the probability of occurrence. A positive relationship with the deadwood crown size indicated the importance of fresh deadwood. Remote sensing data allowed both an area-wide prediction of species occurrence and the derivation of ecological threshold values for deadwood quality and quantity for more informed conservation management.
For the differentiation of a embryonic stem cells (ESCs) to neuronal cells (NCs) a complex and coordinated gene regulation program is needed. One important control element for neuronal differentiation is the repressor element 1 silencing transcription factor (REST) complex, which represses neuronal gene expression in non-neuronal cells. Crucial effector proteins of the REST complex are small phosphatases such as the CTDSPs (C-terminal domain small phosphatases) that regulate polymerase II activity by dephosphorylating the C-terminal domain of the polymerase, thereby repressing target genes. The stepwise inactivation of REST, including the CTDSPs, leads to the induction of a neuron-specific gene program, which ultimately induces the formation of neurons. The spatio-temporal control of REST and its effector components is therefore a crucial step for neurogenesis.
In zebrafish it was shown that the REST-associated CTDSP2 is negatively regulated by the micro RNA (miR) -26b. Interestingly, the miR-26b is encoded in an intron of the primary transcript of CTDSP2. This gives the fundament of an intrinsic regulatory negative feedback loop, which is essential for the proceeding of neurogenesis. This feedback loop is active during neurogenesis, but inactive in non-neuronal cells. The reason for this is that the maturation of the precursor miR (pre-miR) to the mature miR-26 is arrested in non neuronal cells, but not in neurons. As only mature miRs are actively repressing genes, the regulation of miR-26 processing is an essential step in neurogenesis.
In this study, the molecular basis of miR-26 processing regulation in the context of neurogenesis was addressed. The mature miR is processed from two larger precursors: First the primary transcript is cleaved by the enzyme DROSHA in the nucleus to form the pre-miR. The pre-miR is exported from the nucleus and processed further through the enzyme DICER to yield the mature miR. The mature miR can regulate gene expression in association with the RNA-induced silencing complex (RISC).
Multiple different scenarios in which miR processing was regulated were proposed and experimentally tested. Microinjection studies using Xenopus leavis oocytes showed that slowdown or blockage of the nucleo-cytoplasmic transport are not the reason for delayed pre-miR-26 processing. Moreover, in vitro and in vivo miR-processing assays showed that maturation is most likely regulated through a in trans acting factor, which blocks processing in non neuronal cells.
Through RNA affinity chromatographic assays using zebrafish and murine lysates I was able to isolate and identify proteins that interact specifically with pre-miR-26 and could by this influence its biogenesis. Potential candidates are FMRP/FXR1/2, ZNF346 and Eral1, whose functional characterisation in the context of miR-biogenesis could now be addressed.
The second part of my thesis was executed in close colaboration with the laboratory of Prof. Albrecht Müller. The principal question was addressed how miR-26 influences neuronal gene expression and which genes are primarily affected. This research question could be addressed by using a cell culture model system, which mimics ex vivo the differentiation of ESCs to NCs via neuronal progenitor.
For the functional analysis of miR-26 knock out cell lines were generated by the CRISPR/Cas9 technology. miR-26 deficient ESC keep their pluripotent state and are able to develop NPC, but show major impairment in differentiating to NCs. Through RNA deep sequencing the miR-26 induced transcriptome differences could be analysed.
On the level of mRNAs it could be shown, that the expression of neuronal gene is downregulated in miR-26 deficient NCs. Interestingly, the deletion of miR-26 leads to selectively decreased levels of miRs, which on one hand regulate the REST complex and on the other hand are under transcriptional control by REST themself. This data and the discovery that induction of miR-26 leads to enrichment of other REST regulating miRs indicates that miR-26 initiates neurogenesis through stepwise inactivation of the REST complex.
This work is concerned with the numerical approximation of solutions to models that are used to describe atmospheric or oceanographic flows. In particular, this work concen- trates on the approximation of the Shallow Water equations with bottom topography and the compressible Euler equations with a gravitational potential. Numerous methods have been developed to approximate solutions of these models. Of specific interest here are the approximations of near equilibrium solutions and, in the case of the Euler equations, the low Mach number flow regime. It is inherent in most of the numerical methods that the quality of the approximation increases with the number of degrees of freedom that are used. Therefore, these schemes are often run in parallel on big computers to achieve the best pos- sible approximation. However, even on those big machines, the desired accuracy can not be achieved by the given maximal number of degrees of freedom that these machines allow. The main focus in this work therefore lies in the development of numerical schemes that give better resolution of the resulting dynamics on the same number of degrees of freedom, compared to classical schemes.
This work is the result of a cooperation of Prof. Klingenberg of the Institute of Mathe- matics in Wu¨rzburg and Prof. R¨opke of the Astrophysical Institute in Wu¨rzburg. The aim of this collaboration is the development of methods to compute stellar atmospheres. Two main challenges are tackled in this work. First, the accurate treatment of source terms in the numerical scheme. This leads to the so called well-balanced schemes. They allow for an accurate approximation of near equilibrium dynamics. The second challenge is the approx- imation of flows in the low Mach number regime. It is known that the compressible Euler equations tend towards the incompressible Euler equations when the Mach number tends to zero. Classical schemes often show excessive diffusion in that flow regime. The here devel- oped scheme falls into the category of an asymptotic preserving scheme, i.e. the numerical scheme reflects the behavior that is computed on the continuous equations. Moreover, it is shown that the diffusion of the numerical scheme is independent of the Mach number.
In chapter 3, an HLL-type approximate Riemann solver is adapted for simulations of the Shallow Water equations with bottom topography to develop a well-balanced scheme. In the literature, most schemes only tackle the equilibria when the fluid is at rest, the so called Lake at rest solutions. Here a scheme is developed to accurately capture all the equilibria of the Shallow Water equations. Moreover, in contrast to other works, a second order extension is proposed, that does not rely on an iterative scheme inside the reconstruction procedure, leading to a more efficient scheme.
In chapter 4, a Suliciu relaxation scheme is adapted for the resolution of hydrostatic equilibria of the Euler equations with a gravitational potential. The hydrostatic relations are underdetermined and therefore the solutions to that equations are not unique. However, the scheme is shown to be well-balanced for a wide class of hydrostatic equilibria. For specific classes, some quadrature rules are computed to ensure the exact well-balanced property. Moreover, the scheme is shown to be robust, i.e. it preserves the positivity of mass and energy, and stable with respect to the entropy. Numerical results are presented in order to investigate the impact of the different quadrature rules on the well-balanced property.
In chapter 5, a Suliciu relaxation scheme is adapted for the simulations of low Mach number flows. The scheme is shown to be asymptotic preserving and not suffering from excessive diffusion in the low Mach number regime. Moreover, it is shown to be robust under certain parameter combinations and to be stable from an Chapman-Enskog analysis.
Numerical results are presented in order to show the advantages of the new approach.
In chapter 6, the schemes developed in the chapters 4 and 5 are combined in order to investigate the performance of the numerical scheme in the low Mach number regime in a gravitational stratified atmosphere. The scheme is shown the be well-balanced, robust and stable with respect to a Chapman-Enskog analysis. Numerical tests are presented to show the advantage of the newly proposed method over the classical scheme.
In chapter 7, some remarks on an alternative way to tackle multidimensional simulations are presented. However no numerical simulations are performed and it is shown why further research on the suggested approach is necessary.
Abstract
Despite multidisciplinary local and systemic therapeutic approaches, the prognosis for most patients with brain metastases is still dismal. The role of adaptive and innate anti-tumor response including the Human Leukocyte Antigen (HLA) machinery of antigen presentation is still unclear. We present data on the HLA class II-chaperone molecule CD74 in brain metastases and its impact on the HLA peptidome complexity.
We analyzed CD74 and HLA class II expression on tumor cells in a subset of 236 human brain metastases, primary tumors and peripheral metastases of different entities in association with clinical data including overall survival. Additionally, we assessed whole DNA methylome profiles including CD74 promoter methylation and differential methylation in 21 brain metastases. We analyzed the effects of a siRNA mediated CD74 knockdown on HLA-expression and HLA peptidome composition in a brain metastatic melanoma cell line.
We observed that CD74 expression on tumor cells is a strong positive prognostic marker in brain metastasis patients and positively associated with tumor-infiltrating T-lymphocytes (TILs). Whole DNA methylome analysis suggested that CD74 tumor cell expression might be regulated epigenetically via CD74 promoter methylation. CD74\(^{high}\) and TIL\(^{high}\) tumors displayed a differential DNA methylation pattern with highest enrichment scores for antigen processing and presentation. Furthermore, CD74 knockdown in vitro lead to a reduction of HLA class II peptidome complexity, while HLA class I peptidome remained unaffected.
In summary, our results demonstrate that a functional HLA class II processing machinery in brain metastatic tumor cells, reflected by a high expression of CD74 and a complex tumor cell HLA peptidome, seems to be crucial for better patient prognosis.
In der vorliegenden Dissertation wurden die Folgen einer SPRED2-Defizienz in einem Knockout Mausmodell untersucht. Dabei wurde insbesondere die mögliche Verbindung zur Zwangsstörung, einer psychiatrischen Erkrankung beleuchtet. Das SPRED2-Protein kommt im menschlichen Körper in zahlreichen Geweben vor, besonders im Hirn wurde eine ubiquitäre Expression nachgewiesen und ein Zusammenhang mit der Neurogenese und neuronaler Differenzierung vermutet. Seine regulatorische Funktion besteht in einer inhibitorischen Wirkung auf den BDNF/TrkB-ERK-Signalweg, welcher u.a. für die Transkription neuronaler Gene verantwortlich ist. Die verwendeten SPRED2-defizienten Mäuse wurden durch Insertion eines Gene-Trap Vektors in das Spred2-Gen generiert. Die Insertion verhindert letztendlich die korrekte Translation des Proteins. Von der durch weitere Verpaarung entstehenden SPRED2-Knockout Mauslinie wurden ausschließlich männliche Tiere verwendet. Im Rahmen einer SPRED2-KO-Studie von der AG Schuh des Physiologischen Instituts der Universität Würzburg, die u.a. die Entgleisung der HHNA mit resultierendem erhöhten Stresshormonspiegel und eine Dysregulation des Mineralhaushaltshormons Aldosteron zeigte, wurden bei den Versuchstieren zwanghafte Verhaltensmuster beobachtet. Daraufhin wurden elektrophysiologische Messungen durchgeführt, die auf eine Anomalie in der synaptischen Übertragung zwischen Thalamus und Amygdala hindeuteten. Erhöhte Effizienz und Erregbarkeit der amygdaloiden Neuronen führten zu der morphologischen Untersuchung, die im Rahmen dieser Arbeit durchgeführt wurden. Da die Afferenzen des Thalamus vorwiegend in den lateralen Kern der Amygdala projizieren, wurde zunächst dieser betrachtet. Ziel der Untersuchung war es, Erkenntnisse darüber zu erlangen, ob der Knockout des SPRED2-Proteins in Mäusen zu einer veränderten Morphologie der Neuronen der lateralen Amygdala führt. Falls dies der Fall sein sollte, könnte damit zumindest ansatzweise das zwanghafte Verhalten der SPRED2-defizienten Mäusen erklärt werden. Die Hirne der Versuchstiere wurden nach der Golgi-Cox-Imprägnierung nach Glaser und Van der Loos und der Einbettung in Celloidin in 150 μm dicke Scheiben geschnitten und anschließend mithilfe eines Hellfeld-Mikroskops und des Neurolucida-Systems analysiert. Quantitativ erfasst und analysiert wurden pyramidale Klasse 1-Neuronen der lateralen Amygdala inklusive absoluter Anzahl und Dichte der Spines an ihren Dendriten. Die Untersuchung zeigte bei SPRED2-KO-Mäusen eine signifikante Erhöhung der mittleren Länge des apikalen Dendriten in Branch order 3 und eine tendenzielle Erhöhung der Gesamtzahl der Spines an den Dendriten in Branch order 1-3 gegenüber den Wildtyp-Mäusen. Daraus lässt sich folgern, dass ein Knockout des SPRED2-Proteins sich auf die Morphologie der Neuronen der lateralen Amygdala auswirkt. Die erhöhte mittlere Länge des apikalen Dendriten in Branch order 3 und die tendenziell erhöhte Spine-Anzahl korrelieren mit der gesteigerten synaptischen Übertragung und Erregbarkeit an amygdaloiden pyramidalen Neuronen. Auf molekularer Ebene kann die Hyperaktivität der lateralen Amygdala als Folge der fehlenden Inhibition des BDNF/TrkB-ERK-Signalwegs und der dadurch veränderten Expression zahlreicher synaptischer Proteine diskutiert werden. Die veränderte Morphologie der Neuronen in der lateralen Amygdala kann eine Ursache für das zwanghafte Verhalten der Mäuse sein, jedoch ist anzunehmen, dass Zwangsstörungen nicht bloß eine monokausale Ursache haben. Diese Arbeit identifiziert SPRED2 als neuen Regulator der Morphologie und Aktivität von Synapsen und die Amygdala als wichtige Hirnregion bei der Entstehung von Zwangsstörungen. SPRED2 ist somit ein vielversprechender Angriffspunkt für andere und spezifischere Untersuchungen der Hirnfunktion und eine potenzielle genetische Ursache für weitere neurologische Erkrankungen.
Der Schlaganfall ist eine Krankheit mit großer Bedeutung, sowohl für die Betroffenen wie auch unter volkswirtschaftlichen Gesichtspunkten. In der Erforschung neuer und besserer Therapiemethoden für den ischämischen Schlaganfall ist ein gutes in-vitro-Modell der Blut-Hirn-Schranke unerlässlich, da ein Teil der Schädigung des ZNS durch einen Zusammenbruch dieser Barriere verursacht wird.
Die hCMEC/D3-Zelllinie stellt ein solches Modell dar; mit steigender Dauer der ischämischen Stoffwechsellage zeigt sich eine Erhöhung der LDH-Konzentration als Marker für das Absterben der Zellen sowie ein Rückgang der Zellvitalität. Zudem lässt sich eine Entzündungsreaktion mit Anstieg der Marker TNF-Alpha und VEGF, sowie tendenziell auch von Interleukin 6 und Interleukin 8 beobachten, welche auch auf eine Barriereschwächung hindeutet. Aus vorherigen Versuchen bekannte Tight junctions-Proteine wie Claudin 1 und Occludin waren in D3-Zellen unter ischämischen Bedingungen nicht verändert, Claudin 5 war in der PCR vermindert exprimiert. Die für die Barriereschwächung verantwortlichen Strukturproteine müssen durch weitere Versuche identifiziert werden. Eine mögliche Erhöhung der Expression des Transkriptionsfaktors ZO-1 könnte unter diesen Bedingungen einen Mechanismus der Barriereschwächung darstellen.
Die Expression des Glukokortikoidrezeptors war in Monokultur-Versuchen mit D3-Zellen nach Ischämie erniedrigt. Dies stellt eine Gemeinsamkeit mit Versuchen mit Zelllinien tierischen Ursprungs dar; in diesen zeigten die Zellen durch Degradation des Glukokortikoidrezeptors ein fehlendes Ansprechen auf eine Glukokortikoid-Behandlung. In der Cokultur der D3-Zellen mit Gliomzellen der C6-Zelllinie zeigte sich jedoch eine Erhöhung der GR-Expression. Eine Cokultur kann den komplexen Aufbau der Blut-Hirn-Schranke, mit Beteiligung mehrerer Zelltypen, besser darstellen als Versuche mit nur einer Zelllinie. Die Erhöhung der GR-Expression in diesem humanen in-vitro-Modell der Blut-Hirn-Schranke steht im Gegensatz zu den in-vitro-Versuchen mit anderen Zelllinien. Dies könnte eine mögliche Erklärung liefern, warum die Erkenntnisse aus diesen Versuchen bisher nicht zu einer Verbesserung der Evidenz der Glukokortikoid-Therapie beim ischämischen Schlaganfall beigetragen haben. Zudem zeigt die Fluoreszenzfärbung von D3-Zellen, dass diese auch unter Ischämie auf Glukokortikoide reagieren.
To understand the gene regulation of an organism of interest, a comprehensive genome annotation is essential. While some features, such as coding sequences, can be computationally predicted with high accuracy based purely on the genomic sequence, others, such as promoter elements or noncoding RNAs, are harder to detect. RNA sequencing (RNA-seq) has proven to be an efficient method to identify these genomic features and to improve genome annotations. However, processing and integrating RNA-seq data in order to generate high-resolution annotations is challenging, time consuming, and requires numerous steps. We have constructed a powerful and modular tool called ANNOgesic that provides the required analyses and simplifies RNA-seq-based bacterial and archaeal genome annotation. It can integrate data from conventional RNA-seq and differential RNA-seq and predicts and annotates numerous features, including small noncoding RNAs, with high precision. The software is available under an open source license (ISCL) at https://pypi.org/project/ANNOgesic/.
Purpose: Prostate-specific membrane antigen (PSMA)-targeted positron emission tomography (PET) imaging has become commonly utilized in patients with prostate cancer (PCa). The PSMA reporting and data system version 1.0 (PSMA-RADS version 1.0) categorizes lesions on the basis of the likelihood of PCa involvement, with PSMA-RADS-3A (soft tissue) and PSMA-RADS-3B (bone) lesions being indeterminate for the presence of disease. We retrospectively reviewed the imaging follow-up of such lesions to determine the rate at which they underwent changes suggestive of underlying PCa.
Methods: PET/CT imaging with \(^{18}\)F-DCFPyL was carried out in 110 patients with PCa and lesions were categorized according to PSMA-RADS Version 1.0. 56/110 (50.9%) patients were determined to have indeterminate PSMA-RADS-3A or PSMA-RADS-3B lesions and 22/56 (39.3%) patients had adequate follow-up to be included in the analysis. The maximum standardized uptake values (SUV\(_{max}\)) of the lesions were obtained and the ratios of SUV\(_{max}\) of the lesions to SUV\(_{mean}\) of blood pool (SUV\(_{max}\)-lesion/SUV\(_{mean}\)-bloodpool) were calculated. Pre-determined criteria were used to evaluate the PSMA-RADS-3A and PSMA-RADS-3B lesions on follow-up imaging to determine if they demonstrated evidence of underlying malignancy.
Results: A total of 46 lesions in 22 patients were considered indeterminate for PCa (i.e. PSMA-RADS-3A (32 lesions) or PSMA-RADS-3B (14 lesions)) and were evaluable on follow-up imaging. 27/46 (58.7%) lesions demonstrated changes on follow-up imaging consistent with the presence of underlying PCa at baseline. These lesions included 24/32 (75.0%) PSMA-RADS-3A lesions and 3/14 (21.4%) lesions categorized as PSMA-RADS-3B. The ranges of SUVmax and SUVmax-lesion/SUVmean-bloodpool overlapped between those lesions demonstrating changes consistent with malignancy on follow-up imaging and those lesions that remained unchanged on follow-up.
Conclusion: PSMA-RADS-3A and PSMA-RADS-3B lesions are truly indeterminate in that proportions of findings in both categories demonstrate evidence of malignancy on follow-up imaging. Overall, PSMA-RADS-3A lesions are more likely than PSMA-RADS-3B lesions to represent sites of PCa and this information should be taken into when guiding patient therapy.
The HECT-type ubiquitin ligase HECT, UBA and WWE Domain Containing 1, (HUWE1) regulates key cancer-related pathways, including the Myc oncogene. It affects cell proliferation, stress and immune signaling, mitochondria homeostasis, and cell death. HUWE1 is evolutionarily conserved from Caenorhabditis elegance to Drosophila melanogaster and Humans. Here, we report that the Drosophila ortholog, dHUWE1 (CG8184), is an essential gene whose loss results in embryonic lethality and whose tissue-specific disruption establishes its regulatory role in larval salivary gland development. dHUWE1 is essential for endoreplication of salivary gland cells and its knockdown results in the inability of these cells to replicate DNA. Remarkably, dHUWE1 is a survival factor that prevents premature activation of JNK signaling, thus preventing the disintegration of the salivary gland, which occurs physiologically during pupal stages. This function of dHUWE1 is general, as its inhibitory effect is observed also during eye development and at the organismal level. Epistatic studies revealed that the loss of dHUWE1 is compensated by dMyc proeitn expression or the loss of dmP53. dHUWE1 is therefore a conserved survival factor that regulates organ formation during Drosophila development.
Background:
Until now there has been a reported lack of systematic reports and scientific evaluations of rescue missions during terror attacks. This however is urgently required in order to improve the performance of emergency medical services and to be able to compare different missions with each other. Aim of the presented work was to report the systematic evaluation and the lessons learned from the response to a terror attack that happened in Wuerzburg, Germany in 2016.
Methods:
A team of 14 experts developed a template of quality indicators and operational characteristics, which allow for the description, assessment and comparison of civil emergency rescue missions during mass killing incidents. The entire systematic evaluation process consisted of three main steps. The first step was the systematic data collection according to the quality indicators and operational characteristics. Second was the systematic stratification and assessment of the data. The last step was the prioritisation of the identified weaknesses and the definition of the lessons learned.
Results:
Five important “lessons learned” have been defined. First of all, a comprehensive concept for rescue missions during terror attacks is essential. Furthermore, the establishment of a defined high priority communication infrastructure between the different dispatch centres (“red phone”) is vital. The goal is to secure the continuity of information between a few well-defined individuals. Thirdly, the organization of the incident scene needs to be commonly decided and communicated between police, medical services and fire services during the mission. A successful mission tactic requires continuous flux of reports to the on-site command post. Therefore, a predefined and common communication infrastructure for all operational forces is a crucial point. Finally, all strategies need to be extensively trained before the real life scenario hits.
Conclusion:
According to a systematic evaluation, we defined the lessons learned from a terror attack in 2016. Further systematic reports and academic work surrounding life threatening rescue missions and mass killing incidents are needed in order to ultimately improve such mission outcomes. In the future, a close international collaboration might help to find the best database to report and evaluate major incidents but also mass killing events.
In today’s world of work, networking behaviors are an important and viable strategy to enhance success in work and career domains. Concerning personality as an antecedent of networking behaviors, prior studies have exclusively relied on trait perspectives that focus on how people feel, think, and act. Adopting a motivational perspective on personality, we enlarge this focus and argue that beyond traits predominantly tapping social content, motives shed further light on instrumental aspects of networking – or why people network. We use McClelland’s implicit motives framework of need for power (nPow), need for achievement (nAch), and need for affiliation (nAff) to examine instrumental determinants of networking. Using a facet theoretical approach to networking behaviors, we predict differential relations of these three motives with facets of (1) internal vs. external networking and (2) building, maintaining, and using contacts. We conducted an online study, in which we temporally separate measures (N = 539 employed individuals) to examine our hypotheses. Using multivariate latent regression, we show that nAch is related to networking in general. In line with theoretical differences between networking facets, we find that nAff is positively related to building contacts, whereas nPow is positively related to using internal contacts. In sum, this study shows that networking is not only driven by social factors (i.e., nAff), but instead the achievement motive is the most important driver of networking behaviors.
In dieser Arbeit wurde gezeigt, dass aus uniparentalen, embryonalen
Stammzellen mit fehlender maternal geprägter Genexpression (AG-Zellen)
differenzierte neuronale Progenitorzellen (pNPCs) eine ähnliche neuronale
Kapazität wie wildtypische Progenitorzellen haben. Sie bilden nach
histomorphologischen Kriterien in vitro adulte Neurone mit Ausbildung eines
synaptischen Netzwerks. In elektrophysiologischen PatchClamp-
Untersuchungen wurde gezeigt, dass diese Zellen, ähnlich dem wildtypischen
Pendant, spannungsabhängige Natrium- und Kaliumkanälen besitzen, ein
negatives Membranpotential haben und bei Stimulation mit repetitiven
Aktionspotentialen reagieren. Nach Transplantation in einem Schädel-Hirn-
Trauma-Modell konnten nach drei Monaten in vivo Donorzellen mit neuraler
Morphologie und der Expression von jungen, neuronalen und glialen Proteinen
gefunden werden. Die Teratombildung ist im Vergleich zum Wildtyp unverändert,
eine maligne Entartung mit invasivem Wachstum oder ausgedehnter
Metastasierung konnte nicht gefunden werden. Aus AG-Zellen generierte
neuronale Progenitorzellen sind ein starkes Instrument, um neuronale
genomische Prägung zu untersuchen. Außerdem könnte die regenerative
Kapazität für eine patientenspezifische Zellersatztherapie genutzt werden.
Der Betrieb von Satelliten wird sich in Zukunft gravierend ändern. Die bisher ausgeübte konventionelle Vorgehensweise, bei der die Planung der vom Satelliten auszuführenden Aktivitäten sowie die Kontrolle hierüber ausschließlich vom Boden aus erfolgen, stößt bei heutigen Anwendungen an ihre Grenzen. Im schlimmsten Fall verhindert dieser Umstand sogar die Erschließung bisher ungenutzter Möglichkeiten. Der Gewinn eines Satelliten, sei es in Form wissenschaftlicher Daten oder der Vermarktung satellitengestützter Dienste, wird daher nicht optimal ausgeschöpft.
Die Ursache für dieses Problem lässt sich im Grunde auf eine ausschlaggebende Tatsache zurückführen: Konventionelle Satelliten können ihr Verhalten, d.h. die Folge ihrer Tätigkeiten, nicht eigenständig anpassen. Stattdessen erstellt das Bedienpersonal am Boden - vor allem die Operatoren - mit Hilfe von Planungssoftware feste Ablaufpläne, die dann in Form von Kommandosequenzen von den Bodenstationen aus an die jeweiligen Satelliten hochgeladen werden. Dort werden die Befehle lediglich überprüft, interpretiert und strikt ausgeführt. Die Abarbeitung erfolgt linear. Situationsbedingte Änderungen, wie sie vergleichsweise bei der Codeausführung von Softwareprogrammen durch Kontrollkonstrukte, zum Beispiel Schleifen und Verzweigungen, üblich sind, sind typischerweise nicht vorgesehen. Der Operator ist daher die einzige Instanz, die das Verhalten des Satelliten mittels Kommandierung, per Upload, beeinflussen kann, und auch nur dann, wenn ein direkter Funkkontakt zwischen Satellit und Bodenstation besteht. Die dadurch möglichen Reaktionszeiten des Satelliten liegen bestenfalls bei einigen Sekunden, falls er sich im Wirkungsbereich der Bodenstation befindet. Außerhalb des Kontaktfensters kann sich die Zeitschranke, gegeben durch den Orbit und die aktuelle Position des Satelliten, von einigen Minuten bis hin zu einigen Stunden erstrecken. Die Signallaufzeiten der Funkübertragung verlängern die Reaktionszeiten um weitere Sekunden im erdnahen Bereich. Im interplanetaren Raum erstrecken sich die Zeitspannen aufgrund der immensen Entfernungen sogar auf mehrere Minuten. Dadurch bedingt liegt die derzeit technologisch mögliche, bodengestützte, Reaktionszeit von Satelliten bestenfalls im Bereich von einigen Sekunden.
Diese Einschränkung stellt ein schweres Hindernis für neuartige Satellitenmissionen, bei denen insbesondere nichtdeterministische und kurzzeitige Phänomene (z.B. Blitze und Meteoreintritte in die Erdatmosphäre) Gegenstand der Beobachtungen sind, dar. Die langen Reaktionszeiten des konventionellen Satellitenbetriebs verhindern die Realisierung solcher Missionen, da die verzögerte Reaktion erst erfolgt, nachdem das zu beobachtende Ereignis bereits abgeschlossen ist.
Die vorliegende Dissertation zeigt eine Möglichkeit, das durch die langen Reaktionszeiten entstandene Problem zu lösen, auf. Im Zentrum des Lösungsansatzes steht dabei die Autonomie. Im Wesentlichen geht es dabei darum, den Satelliten mit der Fähigkeit auszustatten, sein Verhalten, d.h. die Folge seiner Tätigkeiten, eigenständig zu bestimmen bzw. zu ändern. Dadurch wird die direkte Abhängigkeit des Satelliten vom Operator bei Reaktionen aufgehoben. Im Grunde wird der Satellit in die Lage versetzt, sich selbst zu kommandieren.
Die Idee der Autonomie wurde im Rahmen der zugrunde liegenden Forschungsarbeiten umgesetzt. Das Ergebnis ist ein autonomes Planungssystem. Dabei handelt es sich um ein Softwaresystem, mit dem sich autonomes Verhalten im Satelliten realisieren lässt. Es kann an unterschiedliche Satellitenmissionen angepasst werden. Ferner deckt es verschiedene Aspekte des autonomen Satellitenbetriebs, angefangen bei der generellen Entscheidungsfindung der Tätigkeiten, über die zeitliche Ablaufplanung unter Einbeziehung von Randbedingungen (z.B. Ressourcen) bis hin zur eigentlichen Ausführung, d.h. Kommandierung, ab. Das Planungssystem kommt als Anwendung in ASAP, einer autonomen Sensorplattform, zum Einsatz. Es ist ein optisches System und dient der Detektion von kurzzeitigen Phänomenen und Ereignissen in der Erdatmosphäre.
Die Forschungsarbeiten an dem autonomen Planungssystem, an ASAP sowie an anderen zu diesen in Bezug stehenden Systemen wurden an der Professur für Raumfahrttechnik des Lehrstuhls Informatik VIII der Julius-Maximilians-Universität Würzburg durchgeführt.
As a cradle of ancient Chinese civilization, the Yellow River Basin has a very long human-environment interrelationship, where early anthropogenic activities re- sulted in large scale landscape modifications. Today, the impact of this relationship
has intensified further as the basin plays a vital role for China’s continued economic
development. It is one of the most densely-populated, fastest growing, and most dynamic
regions of China with abundant natural and environmental resources providing a livelihood for almost 190 million people. Triggered by fundamental economic reforms, the
basin has witnessed a spectacular economic boom during the last decades and can be
considered as an exemplary blueprint region for contemporary dynamic Global Change
processes occurring throughout the country, which is currently transitioning from an
agrarian-dominated economy into a modern urbanized society. However, this resourcesdemanding growth has led to profound land use changes with adverse effects on the Yellow
River social-ecological systems, where complex challenges arise threatening a long-term
sustainable development.
Consistent and continuous remote sensing-based monitoring of recent and past land
cover and land use change is a fundamental requirement to mitigate the adverse impacts
of Global Change processes. Nowadays, technical advancement and the multitude of
available satellite sensors, in combination with the opening of data archives, allow the
creation of new research perspectives in regional land cover applications over heterogeneous landscapes at large spatial scales. Despite the urgent need to better understand the
prevailing dynamics and underlying factors influencing the current processes, detailed
regional specific land cover data and change information are surprisingly absent for this
region.
In view of the noted research gaps and contemporary developments, three major objectives are defined in this thesis. First (i), the current and most pressing social-ecological
challenges are elaborated and policy and management instruments towards more sustainability are discussed. Second (ii), this thesis provides new and improved insights on
the current land cover state and dynamics of the entire Yellow River Basin. Finally (iii),
the most dominant processes related to mining, agriculture, forest, and urban dynamics
are determined on finer spatial and temporal scales.
The complex and manifold problems and challenges that result from long-term abuse
of the water and land resources in the basin have been underpinned by policy choices,
cultural attitude, and institutions that have evolved over centuries in China. The tremendous economic growth that has been mainly achieved by extracting water and exploiting
land resources in a rigorous, but unsustainable manner, might not only offset the economic benefits, but could also foster social unrest. Since the early emergence of the first Chinese dynasties, flooding was considered historically as a primary issue in river management and major achievements have been made to tame the wild nature of the Yellow
River. Whereas flooding is therefore largely now under control, new environmental and
social problems have evolved, including soil and water pollution, ecological degradation,
biodiversity decline, and food security, all being further aggravated by anthropogenic
climate change. To resolve the contemporary and complex challenges, many individual
environmental laws and regulations have been enacted by various Chinese ministries.
However, these policies often pursue different, often contradictory goals, are too general
to tackle specific problems and are usually implemented by a strong top-down approach.
Recently, more flexible economic and market-based incentives (pricing, tradable permits,
investments) have been successfully adopted, which are specifically tailored to the respective needs, shifting now away from the pure command and regulating instruments.
One way towards a more holistic and integrated river basin management could be the
establishment of a common platform (e.g. a Geographical Information System) for data
handling and sharing, possibly operated by the Yellow River Basin Conservancy Commission (YRCC), where available spatial data, statistical information and in-situ measures
are coalesced, on which sustainable decision-making could be based. So far, the collected
data is hardly accessible, fragmented, inconsistent, or outdated.
The first step to address the absence and lack of consistent and spatially up-to-date
information for the entire basin capturing the heterogeneous landscape conditions was
taken up in this thesis. Land cover characteristics and dynamics were derived from
the last decade for the years 2003 and 2013, based on optical medium-resolution hightemporal MODIS Normalized Differenced Vegetation Index (NDVI) time series at 250 m.
To minimize the inherent influence of atmospheric and geometric interferences found in
raw high temporal data, the applied adaptive Savitzky-Golay filter successfully smoothed
the time series and substantially reduced noise. Based on the smoothed time series
data, a large variety of intra-annual phenology metrics as well as spectral and multispectral annual statistics were derived, which served as input variables for random
forest (RF) classifiers. High quality reference data sets were derived from very high
resolution imagery for each year independently of which 70 % trained the RF models. The
accuracy assessments for all regionally specific defined thematic classes were based on the
remaining 30 % reference data split and yielded overall accuracies of 87 % and 84 % for
2003 and 2013, respectively. The first regional adapted Yellow River Land Cover Products
(YRB LC) depict the detail spatial extent and distribution of the current land cover status
and dynamics. The novel products overall differentiate overall 18 land cover and use
classes, including classes of natural vegetation (terrestrial and aquatic), cultivated classes,
mosaic classes, non-vegetated, and artificial classes, which are not presented in previous
land cover studies so far.
Building on this, an extended multi-faceted land cover analysis on the most prominent
land cover change types at finer spatial and temporal scales provides a better and more
detailed picture of the Yellow River Basin dynamics. Precise spatio-temporal products
about mining, agriculture, forest, and urban areas were examined from long-trem Landsat
satellite time series monitored at annual scales to capture the rapid rate of change in four
selected focus regions. All archived Landsat images between 2000 and 2015 were used to
derive spatially continuous spectral-temporal, multi-spectral, and textural metrics. For
each thematic region and year RF models were built, trained and tested based on a stablepixels reference data set. The automated adaptive signature (AASG) algorithm identifies those pixels that did not change between the investigated time periods to generate a
mono-temporal reference stable-pixels data set to keep manual sampling requirements
to a minimum level. Derived results gained high accuracies ranging from 88 % to 98 %.
Throughout the basin, afforestation on the Central Loess Plateau and urban sprawl are
identified as most prominent drivers of land cover change, whereas agricultural land
remained stable, only showing local small-scale dynamics. Mining operations started in
2004 on the Qinghai-Tibet Plateau, which resulted in a substantial loss of pristine alpine
meadows and wetlands.
In this thesis, a novel and unique regional specific view of current and past land cover
characteristics in a complex and heterogeneous landscape was presented by using a
multi-source remote sensing approach. The delineated products hold great potential for
various model and management applications. They could serve as valuable components
for effective and sustainable land and water management to adapt and mitigate the
predicted consequences of Global Change processes.
Das follikuläre Lymphom (FL) wird nach der aktuellen Klassifikation der WHO (World Health Organization Classification of Lymphoid Tumours) anhand der Zahl der Zentroblasten in drei Grade und der Grad 3 weiter in 3A und 3B eingeteilt. Bis heute ist die Rolle der FL3B aufgrund der morphologischen und genetischen Unterschiede zu den anderen FL umstritten, es wird eine eigene Entität und Pathogenese des FL3B diskutiert. Durch das Verbundprojekt „Molekulare Mechanismen in malignen Lymphomen“ (MMML) Daten zu FISH-, Genexpressionsanalysen und immunhistochemischen Färbungen bearbeitet werden.
Diesen Daten zufolge sind FL3B in ihrer Genexpression nicht von FL3A trennbar. Es konnte jedoch eine Abgrenzung der FL1/2 zu den FL3A/B durch die erhöhte Expression von 13 Genen in den FL3A/B gefunden werden, von denen Homolog, double strand break repair nuclease (MRE11A), Topoisomerase II alpha (TOP2A) und Thioredoxin (TXN) schon zuvor im Rahmen von FL und NHL diskutiert wurden.
Additive Fertigung – oftmals plakativ „3D-Druck“ genannt – bezeichnet eine Fertigungstechnologie, die die Herstellung physischer Gegenstände auf Basis digitaler, dreidimensionaler Modelle ermöglicht. Das grundlegende Funktionsprinzip und die Gemeinsamkeit aller additiven bzw. generativen Fertigungsverfahren ist die schichtweise Erzeugung des Objekts. Zu den wesentlichen Vorteilen der Technologie gehört die Designfreiheit, die die Integration komplexer Geometrien erlaubt.
Aufgrund der zunehmenden Verfügbarkeit kostengünstiger Geräte für den Heimgebrauch und der wachsenden Marktpräsenz von Druckdienstleistern steht die Technologie erstmals Endkunden in einer Art und Weise zur Verfügung wie es vormals, aufgrund hoher Kosten, lediglich großen Konzernen vorbehalten war. Infolgedessen ist die additive Fertigung vermehrt in den Fokus der breiten Öffentlichkeit geraten. Jedoch haben sich Wissenschaft und Forschung bisher vor allem mit Verfahrens- und Materialfragen befasst. Insbesondere Fragestellungen zu wirtschaftlichen und gesellschaftlichen Auswirkungen haben hingegen kaum Beachtung gefunden. Aus diesem Grund untersucht die vorliegende Dissertation die vielfältigen Implikationen und Auswirkungen der Technologie.
Zunächst werden Grundlagen der Fertigungstechnologie erläutert, die für das Verständnis der Arbeit eine zentrale Rolle spielen. Neben dem elementaren Funktionsprinzip der Technologie werden relevante Begrifflichkeiten aus dem Kontext der additiven Fertigung vorgestellt und zueinander in Beziehung gesetzt.
Im weiteren Verlauf werden dann Entwicklung und Akteure der Wertschöpfungskette der additiven Fertigung skizziert. Anschließend werden diverse Geschäftsmodelle im Kontext der additiven Fertigung systematisch visualisiert und erläutert. Ein weiterer wichtiger Aspekt sind die zu erwartenden wirtschaftlichen Potentiale, die sich aus einer Reihe technischer Charakteristika ableiten lassen. Festgehalten werden kann, dass der Gestaltungsspielraum von Fertigungssystemen hinsichtlich Komplexität, Effizienzsteigerung und Variantenvielfalt erweitert wird. Die gewonnenen Erkenntnisse werden außerdem genutzt, um zwei Vertreter der Branche exemplarisch mithilfe von Fallstudien zu analysieren.
Eines der untersuchten Fallbeispiele ist die populäre Online-Plattform und -Community Thingiverse, die das Veröffentlichen, Teilen und Remixen einer Vielzahl von druckbaren digitalen 3D-Modellen ermöglicht. Das Remixen, ursprünglich bekannt aus der Musikwelt, wird im Zuge des Aufkommens offener Online-Plattformen heute beim Entwurf beliebiger physischer Dinge eingesetzt. Trotz der unverkennbaren Bedeutung sowohl für die Quantität als auch für die Qualität der Innovationen auf diesen Plattformen, ist über den Prozess des Remixens und die Faktoren, die diese beeinflussen, wenig bekannt. Aus diesem Grund werden die Remix-Aktivitäten der Plattform explorativ analysiert. Auf Grundlage der Ergebnisse der Untersuchung werden fünf Thesen sowie praxisbezogene Empfehlungen bzw. Implikationen formuliert. Im Vordergrund der Analyse stehen die Rolle von Remixen in Design-Communities, verschiedene Muster im Prozess des Remixens, Funktionalitäten der Plattform, die das Remixen fördern und das Profil der remixenden Nutzerschaft.
Aufgrund enttäuschter Erwartungen an den 3D-Druck im Heimgebrauch wurde dieser demokratischen Form der Produktion kaum Beachtung geschenkt. Richtet man den Fokus jedoch nicht auf die Technik, sondern die Hobbyisten selbst, lassen sich neue Einblicke in die zugrunde liegenden Innovationsprozesse gewinnen. Die Ergebnisse einer qualitativen Studie mit über 75 Designern zeigen unter anderem, dass Designer das Konzept des Remixens bereits verinnerlicht haben und dieses über die Plattform hinaus in verschiedenen Kontexten einsetzen. Ein weiterer Beitrag, der die bisherige Theorie zu Innovationsprozessen erweitert, ist die Identifikation und Beschreibung von sechs unterschiedlichen Remix-Prozessen, die sich anhand der Merkmale Fähigkeiten, Auslöser und Motivation unterscheiden lassen.
Herzkreislauferkrankungen stellen die häufigsten Todesursachen in den Industrienationen dar. Die Entwicklung nichtinvasiver Bildgebungstechniken mit Hilfe der Magnetresonanz-Tomografie (MRT) ist daher von großer Bedeutung, um diese Erkrankungen frühzeitig zu erkennen und um die Entstehungsmechanismen zu erforschen. In den letzten Jahren erwiesen sich dabei genetisch modifzierte Mausmodelle als sehr wertvoll, da sich durch diese neue Bildgebungsmethoden entwickeln lassen und sich der Krankheitsverlauf im Zeitraffer beobachten lässt.
Ein große Herausforderung der murinen MRT-Bildgebung sind die die hohen Herzraten und die schnelle Atmung. Diese erfordern eine Synchronisation der Messung mit dem Herzschlag und der Atmung des Tieres mit Hilfe von Herz- und Atemsignalen. Konventionelle Bildgebungstechniken verwenden zur Synchronisation mit dem Herzschlag EKG Sonden, diese sind jedoch insbesondere bei hohen Feldstärken (>3 T) sehr störanfällig. In dieser Arbeit wurden daher neue Bildgebungsmethoden entwickelt, die keine externen Herz- und Atemsonden benötigen, sondern das MRT-Signal selbst zur Bewegungssynychronisation verwenden. Mit Hilfe dieser Technik gelang die Entwicklung neuer Methoden zur Flussbildgebung und der 3D-Bildgebung, mit denen sich das arterielle System der Maus qualitativ und quantitativ erfassen lässt, sowie einer neuen Methode zur Quantisierung der longitudinalen Relaxationszeit T1 im murinen Herzen. Die in dieser Arbeit entwickelten Methoden ermöglichen robustere Messungen des Herzkreislaufsystems. Im letzten Kapitel konnte darüber hinaus gezeigt werden dass sich die entwickelten Bildgebungstechniken in der Maus auch auf die humane Bildgebung übertragen lassen.
In der Studie dieser Dissertation wird untersucht, ob das biokompatible Kollagennetz Lyoplant® (B.Braun, Deutschland) ein geeignetes Biomaterial zur Harnblasenaugmentation ist. Es wurden 16 Wistar Ratten ein Lyoplant® -Netz in die Harnblasen implantiert. Nach sechs Wochen lang täglicher Visite wurden die Harnblasen explantiert und mikroskopisch, sowie immunhistologisch aufgearbeitet. Es zeigte sich eine Epithelialisierung und die Bildung von Bindegewebe, außerdem wenig Entzündungszellen, sodass Lyoplant® ein gut verträgliches Material zur Blasenaugmentation im Kleintiermodell ist.
Im Rahmen dieser Arbeit wurden zunächst bei den gesammelten 14 Tumoren mit einem putativen allelischen Verlust im Bereich 8p21.3-22 nochmals eine LOH-Analyse durchgeführt und die Voruntersuchungen bestätigt. Als zweiter Schritt konnte die Etablierung des MTUS1-Antikörpers erfolgreich durchgeführt werden. Die Paraffinblöcke wurde aus dem Institut für Pathologie herausgesucht und selbstständig Schnitte davon angefertigt. Die immunhistochemische Analyse der MTUS1-Expression ergab einen Expressionsverlust bei 7 von 14 Tumoren und eine Reduktion der Expression bei weiteren 3 der 14 Tumoren. Bei insgesamt 7 von 14 Tumoren scheint somit die Expression von dem allelischen Verlust assoziiert zu sein. Allerdings konnte bei den übrigen 7 Tumoren eine Expression des MTUS1-Gens nachgewiesen werden. Ein allelischer Verlust führt somit nicht immer zu einer Inaktivierung von MTUS1. MTUS1 wird somit nicht immer nach dem klassischen Mechanismen der Knudson-Hypothese (Mutation des ersten Allels gefolgt von der Deletion des zweiten Alles) inaktiviert. Möglicherweise kann in weiteren Studien ein anderes Gen in dem entsprechenden Bereich identifiziert werden, das im Rahmen eines allelischen Verlustes immer komplett inaktiviert wird. Außerdem sollten, da andere Studien eine Relevanz von MTUS1 als Tumorsupressorgen beim kolorektalen Karzinom und auch bei anderen Tumoren zeigen konnten, weitere Studien durchgeführt werden, in denen alternativen Inaktivierungsmechanismen von MTUS1 untersucht werden.
Die Rolle von Chronophin bei Schlaganfall-induziertem Funktionsverlust der Blut-Hirn-Schranke
(2018)
Der ischämische Schlaganfall ist mit einer jährlichen Inzidenz von 200/100 000 Einwohnern die häufigste Gefäßerkrankung in Deutschland. Atherothrombose, arterielle Hypertonie und Embolien unterschiedlichen Ursprungs sind die wesentlichen Ursachen des ischämischen Schlaganfalls. Die neurologischen Defizite nach einem Schlaganfall resultieren aus einem gestörten zerebralen Blutfluss und somit einer insuffizienten Sauerstoffversorgung. Zusätzlich ist die Ödembildung, welche von einer gesteigerten Permeabilität der Blut-Hirn-Schranke verursacht wird, am neuronalen Zelltod beteiligt.
Chronophin ist eine Aktinzytoskelett-regulierende Serin-Phosphatase. In einem ischämischen Schlaganfall-Modell konnte im Rahmen dieser Arbeit gezeigt werden, dass der globale Verlust von Chronophin zu einer vermehrten Ödembildung und einem aggravierten neurologischen Zustand der Mäuse im Vergleich zu wildtypischen Kontrollen führte. Hirnlysate von wildtypischen Mäusen zeigten verringerte Chronophin-Level in der vom Schlaganfall betroffenen Hemisphäre. Jedoch konnten initiale immunhistochemische und zellbiologische Untersuchungen weder Chronophin-abhängige Veränderungen der Blut-Hirn-Schranke feststellen noch einen zerebralen Zelltyp identifizieren, der für den schützenden Effekt von Chronophin verantwortlich ist.
Diese Ergebnisse weisen auf einen komplexen, vielzelligen Mechanismus hin, dem die schützende Rolle von Chronophin im ischämischen Schlaganfall unterliegt. Die Entschlüsselung dieses Mechanismus ist Aufgabe künftiger Untersuchungen.
This thesis describes the studies of topological superconductivity, which is predicted to
emerge when pair correlations are induced into the surface states of 2D and 3D topolog-
ical insulators (TIs). In this regard, experiments have been designed to investigate the
theoretical ideas first pioneered by Fu and Kane that in such system Majorana bound
states occur at vortices or edges of the system [Phys. Rev. Lett. 100, 096407 (2008), Phys.
Rev. B 79, 161408 (2009)]. These states are of great interest as they constitute a new
quasiparticle which is its own antiparticle and can be used as building blocks for fault
tolerant topological quantum computing.
After an introduction in chapter 1, chapter 2 of the thesis lays the foundation for the
understanding of the field of topology in the context of condensed matter physics with a
focus on topological band insulators and topological superconductors. Starting from a
Chern insulator, the concepts of topological band theory and the bulk boundary corre-
spondence are explained. It is then shown that the low energy Hamiltonian of mercury
telluride (HgTe) quantum wells of an appropriate thickness can be written as two time
reversal symmetric copies of a Chern insulator. This leads to the quantum spin Hall effect.
In such a system, spin-polarized one dimensional conducting states form at the edges
of the material, while the bulk is insulating. This concept is extended to 3D topological
insulators with conducting 2D surface states. As a preliminary step to treating topological
superconductivity, a short review of the microscopic theory of superconductivity, i.e. the
theory of Bardeen, Cooper, and Shrieffer (BCS theory) is presented. The presence of
Majorana end modes in a one dimensional superconducting chain is explained using the
Kitaev model. Finally, topological band insulators and conventional superconductivity
are combined to effectively engineer p-wave superconductivity. One way to investigate
these states is by measuring the periodicity of the phase of the Josephson supercurrent
in a topological Josephson junction. The signature is a 4π-periodicity compared to the
2π-periodicity in conventional Josephson junctions. The proof of the presence of this
effect in HgTe based Josephson junction is the main goal of this thesis and is discussed in
chapters 3 to 6.
Chapter 3 describes in detail the transport of a 3D topological insulator based weak
link under radio-frequency radiation. The chapter starts with a review of the state of
research of (i) strained HgTe as 3D topological insulator and (ii) the progress of induc-
ing superconducting correlations into the topological surface states and the theoretical
predictions of 3D TI based Josephson junctions. Josephson junctions based on strained
HgTe are successfully fabricated. Before studying the ac driven Josephson junctions, the
dc transport of the devices is analysed. The critical current as a function of temperature
is measured and it is possible to determine the induced superconducting gap. Under
rf illumination Shapiro steps form in the current voltage characteristic. A missing first
step at low frequencies and low powers is found in our devices. This is a signature of
a 4π-periodic supercurrent. By studying the device in a wide parameter range - as a
147148 SUMMARY
function of frequency, power, device geometry and magnetic field - it is shown that the
results are in agreement with the presence of a single gapless Andreev doublet and several
conventional modes.
Chapter 4 gives results of the numerical modelling of the I −V dynamics in a Josephson
junction where both a 2π- and a 4π-periodic supercurrents are present. This is done in
the framework of an equivalent circuit representation, namely the resistively shunted
Josephson junction model (RSJ-model). The numerical modelling is in agreement with
the experimental results in chapter 3. First, the missing of odd Shapiro steps can be
understood by a small 4π-periodic supercurrent contribution and a large number of
modes which have a conventional 2π-periodicity. Second, the missing of odd Shapiro
steps occurs at low frequency and low rf power. Third, it is shown that stochastic processes
like Landau Zener tunnelling are most probably not responsible for the 4π contribution.
In a next step the periodicity of Josephson junctions based on quantum spin Hall
insulators using are investigated in chapter 5. A fabrication process of Josephson junctions
based on inverted HgTe quantum wells was successfully developed. In order to achieve a
good proximity effect the barrier material was removed and the superconductor deposited
without exposing the structure to air. In a next step a gate electrode was fabricated which
allows the chemical potential of the quantum well to be tuned. The measurement of the
diffraction pattern of the critical current Ic due to a magnetic field applied perpendicular
to the sample plane was conducted. In the vicinity to the expected quantum spin Hall
phase, the pattern resembles that of a superconducting quantum interference device
(SQUID). This shows that the current flows predominantly on the edges of the mesa.
This observation is taken as a proof of the presence of edge currents. By irradiating the
sample with rf, missing odd Shapiro steps up to step index n = 9 have been observed. This
evidences the presence of a 4π-periodic contribution to the supercurrent. The experiment
is repeated using a weak link based on a non-inverted HgTe quantum well. This material
is expected to be a normal band insulator without helical edge channels. In this device,
all the expected Shapiro steps are observed even at low frequencies and over the whole
gate voltage range. This shows that the observed phenomena are directly connected
to the topological band structure. Both features, namely the missing of odd Shapiro
steps and the SQUID like diffraction pattern, appear strongest towards the quantum spin
Hall regime, and thus provide evidence for induced topological superconductivity in the
helical edge states.
A more direct way to probe the periodicity of the Josephson supercurrent than using
Shapiro steps is the measurement of the emitted radiation of a weak link. This experiment
is presented in chapter 6. A conventional Josephson junction converts a dc bias V to
an ac current with a characteristic Josephson frequency fJ
= eV /h. In a topological
Josephson junction a frequency at half the Josephson frequency fJ /2 is expected. A
new measurement setup was developed in order to measure the emitted spectrum of a
single Josephson junction. With this setup the spectrum of a HgTe quantum well based
Josephson junction was measured and the emission at half the Josephson frequency fJ /2
was detected. In addition, fJ emission is also detected depending on the gate voltage and
detection frequency. The spectrum is again dominated by half the Josephson emission at
low voltages while the conventional emission is determines the spectrum at high voltages.
A non-inverted quantum well shows only conventional emission over the whole gateSUMMARY 149
voltage and frequency range. The linewidth of the detected frequencies gives a measure
on the lifetime of the bound states: From there, a coherence time of 0.3–4ns for the fJ /2
line has been deduced. This is generally shorter than for the fJ line (3–4ns).
The last part of the thesis, chapter 7, reports on the induced superconducting state
in a strained HgTe layer investigated by point-contact Andreev reflection spectroscopy.
For the experiment, a HgTe mesa was fabricated with a small constriction. The diameter
of the orifice was chosen to be smaller than the mean free path estimated from magne-
totransport measurements. Thus one gets a ballistic point-contact which allows energy
resolved spectroscopy. One part of the mesa is covered with a superconductor which
induces superconducting correlations into the surface states of the topological insulator.
This experiment therefore probes a single superconductor normal interface. In contrast to
the Josephson junctions studied previously, the geometry allows the acquisition of energy
resolved information of the induced superconducting state through the measurement
of the differential conductance dI/dV as a function of applied dc bias for various gate
voltages, temperatures and magnetic fields. An induced superconducting order parame-
ter of about 70µeV was extracted but also signatures of the niobium gap at the expected
value around Δ Nb
≈ 1.1meV have been found. Simulations using the theory developed by
Blonder, Tinkham and Klapwijk and an extended model taking the topological surface
states into account were used to fit the data. The simulations are in agreement with a
small barrier at the topological insulator-induced topological superconductor interface
and a high barrier at the Nb to topological insulator interface. To understand the full con-
ductance curve as a function of applied voltage, a non-equilibrium driven transformation
is suggested. The induced superconductivity is suppressed at a certain bias value due to
local electron population. In accordance with this suppression, the relevant scattering
regions change spatially as a function of applied bias.
To conclude, it is emphasized that the experiments conducted in this thesis found
clear signatures of induced topological superconductivity in HgTe based quantum well
and bulk devices and opens up the avenue to many experiments. It would be interesting
to apply the developed concepts to other topological matter-superconductor hybrid
systems. The direct spectroscopy and manipulation of the Andreev bound states using
circuit quantum electrodynamic techniques should be the next steps for HgTe based
samples. This was already achieved in superconducting atomic break junctions by the
group in Saclay [Science 2015, 349, 1199-1202 (2015)]. Another possible development
would be the on-chip detection of the emitted spectrum as a function of the phase φ
through the junction. In this connection, the topological junction needs to be shunted
by a parallel ancillary junction. Such a setup would allow the current phase relation
I(φ) directly and the lifetime of the bound states to be measured directly. By coupling
this system to a spectrometer, which can be another Josephson junction, the energy
dependence of the Andreev bound states E(φ) could be obtained. The experiments on
the Andreev reflection spectroscopy described in this thesis could easily be extended to
two dimensional topological insulators and to more complex geometries, like a phase
bias loop or a tunable barrier at the point-contact. This work might also be useful for
answering the question how and why Majorana bound states can be localized in quantum
spin Hall systems.
Inter-comparison of quantitative imaging of lutetium-177 (\(^{177}\)Lu) in European hospitals
(2018)
Background
This inter-comparison exercise was performed to demonstrate the variability of quantitative SPECT/CT imaging for lutetium-177 (\(^{177}\)Lu) in current clinical practice. Our aim was to assess the feasibility of using international inter-comparison exercises as a means to ensure consistency between clinical sites whilst enabling the sites to use their own choice of quantitative imaging protocols, specific to their systems.
Dual-compartment concentric spherical sources of accurately known activity concentrations were prepared and sent to seven European clinical sites. The site staff were not aware of the true volumes or activity within the sources—they performed SPECT/CT imaging of the source, positioned within a water-filled phantom, using their own choice of parameters and reported their estimate of the activities within the source.
Results
The volumes reported by the participants for the inner section of the source were all within 29% of the true value and within 60% of the true value for the outer section. The activities reported by the participants for the inner section of the source were all within 20% of the true value, whilst those reported for the outer section were up to 83% different to the true value.
Conclusions
A variety of calibration and segmentation methods were used by the participants for this exercise which demonstrated the variability of quantitative imaging across clinical sites. This paper presents a method to assess consistency between sites using different calibration and segmentation methods.
Background: Precise regional quantitative assessment of renal function is limited with conventional \(^{99m}\)Tc-labeled renal radiotracers. A recent study reported that the positron emission tomography (PET) radiotracer 2-deoxy-2-(\(^{18}\)F-fluorosorbitol (\(^{18}\)F-FDS) has ideal pharmacokinetics for functional renal imaging. Furthermore, (\(^{18}\)F-FDS is available via simple reduction from routinely used 2-deoxy-2-(\(^{18}\)F-fluoro-D-glucose ((\(^{18}\)F-FDG). We aimed to further investigate the potential of (\(^{18}\)F-FDS PET as a functional renal imaging agent using rat models of kidney diseases.
Methods: Two different rat models of renal impairment were investigated: Glycerol induced acute renal failure (ARF) by intramuscular administration of glycerol in hind legs and unilateral ureteral obstruction (UUO) by ligation of the left ureter. 24h after these treatments, dynamic 30 min 18F-FDS PET data were acquired using a dedicated small animal PET system. Urine 18F-FDS radioactivity 30 min after radiotracer injection was measured together with co-injected \(^{99m}\)Tc-diethylenetriaminepentaacetic acid (\(^{99m}\)Tc-DTPA) urine activity. Results: Dynamic PET imaging demonstrated rapid (\(^{18}\)F-FDS accumulation in the renal cortex and rapid radiotracer excretion via kidneys in control healthy rats. On the other hand, significantly delayed renal radiotracer uptake (continuous slow uptake) was observed in ARF rats and UUO-treated kidneys. Measured urine radiotracer concentrations of (\(^{18}\)F-FDS and \(^{99m}\)Tc-DTPA were well correlated (R=0.84, P<0.05).
Conclusions: (\(^{18}\)F-FDS PET demonstrated favorable kinetics for functional renal imaging in rat models of kidney diseases. Advantages of high spatiotemporal resolution of PET imaging and simple tracer production could potentially complement or replace conventional renal scintigraphy in select cases and significantly improve the diagnostic performance of renal functional imaging.
Aims: Although mortality rate is very high, diagnosis of acute myocarditis remains challenging with conventional tests. We aimed to elucidate the potential role of longitudinal 2-Deoxy-2-\(^{18}\)F-fluoro-D-glucose (\(^{18}\)F-FDG) positron emission tomography (PET) inflammation monitoring in a rat model of experimental autoimmune myocarditis.
Methods and results: Autoimmune myocarditis was induced in Lewis rats by immunizing with porcine cardiac myosin emulsified in complete Freund’s adjuvant. Time course of disease was assessed by longitudinal \(^{18}\)F-FDG PET imaging. A correlative analysis between in- and ex vivo \(^{18}\)F-FDG signalling and macrophage infiltration using CD68 staining was conducted. Finally, immunohistochemistry analysis of the cell-adhesion markers CD34 and CD44 was performed at different disease stages determined by longitudinal \(^{18}\)F-FDG PET imaging. After immunization, myocarditis rats revealed a temporal increase in 18F-FDG uptake (peaked at week 3), which was followed by a rapid decline thereafter. Localization of CD68 positive cells was well correlated with in vivo \(^{18}\)F-FDG PET signalling (R\(^2\) = 0.92) as well as with ex vivo 18F-FDG autoradiography (R\(^2\) = 0.9, P < 0.001, respectively). CD44 positivity was primarily observed at tissue samples obtained at acute phase (i.e. at peak 18F-FDG uptake), while CD34-positive staining areas were predominantly identified in samples harvested at both sub-acute and chronic phases (i.e. at \(^{18}\)F-FDG decrease).
Conclusion: \(^{18}\)F-FDG PET imaging can provide non-invasive serial monitoring of cardiac inflammation in a rat model of acute myocarditis.
Reliable standards and criteria for somatostatin receptor (SSTR) positron emission tomography (PET) are still lacking. We herein propose a structured reporting system on a 5-point scale for SSTR-PET imaging, titled SSTR-RADS version 1.0, which might serve as a standardized assessment for both diagnosis and treatment planning in neuroendocrine tumors (NET). SSTR-RADS could guide the imaging specialist in interpreting SSTR-PET scans, facilitate communication with the referring clinician so that appropriate work-up for equivocal findings is pursued, and serve as a reliable tool for patient selection for planned Peptide Receptor Radionuclide Therapy.
Introduction: Therapeutic options in advanced medullary thyroid carcinoma (MTC) have markedly improved since the introduction of tyrosine kinase inhibitors (TKI). We
aimed to assess the role of metabolic imaging using 2-deoxy-2-(\(^{18}\)F)fluoro-D-glucose (\(^{18}\)F-FDG) positron emission tomography/computed tomography (PET/CT) shortly before and 3 months after initiation of TKI treatment.
Methods: Eighteen patients with advanced and progressive MTC scheduled for vandetanib treatment underwent baseline \(^{18}\)F-FDG PET/CT prior to and 3 months after TKI treatment initiation. During follow-up, CT scans were performed every 3 months and analyzed according to Response Evaluation Criteria In Solid Tumors (RECIST). The predictive value for estimating progression-free (PFS) and overall survival (OS) was examined by investigating \(^{18}\)F-FDG mean/maximum standardized uptake values (SUVmean/max) of the metabolically most active lesion as well as by analyzing clinical parameters (tumor marker doubling times {calcitonin, carcinoembryonic antigen (CEA)}, prior therapies, RET (rearranged during transfection) mutational status, and disease type).
Results: Within a median follow-up of 5.2 years, 9 patients experienced disease progression after a median time interval of 2.1y whereas the remainder had ongoing disease control (n=5 partial response and n=4 stable disease). Eight of the 9 patients with progressive disease died from MTC after a median of 3.5y after TKI initiation.
Pre-therapeutic SUVmean >4.0 predicted a significantly shorter PFS (PFS: 1.9y vs. 5.2y; p=0.04). Furthermore, sustained high 18F-FDG uptake at 3 months with a SUVmean>2.8 tended to portend an unfavorable prognosis with a PFS of 1.9y (vs. 3.5y; p=0.3). Prolonged CEA doubling times were significantly correlated with longer PFS (r=0.7) and OS (r=0.76, p<0.01, respectively). None of the other clinical parameters had prognostic significance.
Conclusions: Pre-therapeutic \(^{18}\)F-FDG PET/CT holds prognostic information in patients with advanced MTC scheduled for treatment with the TKI vandetanib. Low tumor metabolism of SUVmean < 4.0 prior to treatment predicts longer progression-free survival.
Purpose: As has been previously reported, the somatostatin receptor (SSTR) imaging agent [\(^{68}\)Ga]-labeled 1,4,7,10-tetraazacyclododecane-N,N',N'',N'''-tetraacetic acid-d-Phe(1)-Tyr(3)-octreotate ([\(^{68}\)Ga]DOTATATE) demonstrates lower uptake in normal organs in patients with a high neuroendocrine tumor (NET) burden. Given the higher SSTR affinity of [\(^{68}\)Ga]DOTATATE, we aimed to quantitatively investigate the biodistribution of [\(^{68}\)Ga]-labeled 1,4,7,10-tetraazacyclododecane-N,N',N'',N'''-tetraacetic acid-d-Phe(1)-Tyr(3)-octreotide ([68Ga]DOTATOC) to determine a potential correlation between uptake in normal organs and NET burden.
Procedures: Of the 44 included patients, 36/44 (82%) patients demonstrated suspicious radiotracer uptake on [\(^{68}\)Ga]DOTATOC positron emission tomography (PET)/x-ray computed tomography (CT). Volumes of Interest (VOIs) were defined for tumor lesions and normal organs (spleen, liver, kidneys, adrenals). Mean body weight corrected standardized uptake value (SUV\(_{mean}\)) for normal organs was assessed and was used to calculate the corresponding mean specific activity uptake (Upt: fraction of injected activity per kg of tissue). For the entire tumor burden, SUV\(_{mean}\), maximum standardized uptake value (SUV\(_{max}\)), and the total mass (TBM) was calculated and the decay corrected tumor fractional uptake (TBU) was assessed. A Spearman’s rank correlation coefficient was used to determine the correlations between normal organ uptake and tumor burden.
Results: The median SUV\(_{mean}\) was 18.7 for the spleen (kidneys, 9.2; adrenals, 6.8; liver, 5.6). For tumor burden, the median values were SUV\(_{mean}\) 6.9, SUV\(_{max}\) 35.5, TBM 42.6g, and TBU 1.2%. With increasing volume of distribution, represented by lean body mass and body surface area (BSA), Upt decreased in kidneys, liver, and adrenal glands and SUV\(_{mean}\) increased in the spleen. Correlation improved only for both kidneys and adrenals when the influence of the tumor uptake on the activity available for organ uptake was taken into account by the factor 1/(1-TBU). TBU was neither predictive for SUV\(_{mean}\) nor for Upt in any of the organs. The distribution of organ Upt vs. BSA/(1-TBU) were not different for patients with minor TBU (<3%) vs. higher TBU (>7%), indicating that the correlations observed in the present study are explainable by the body size effect. High tumor mass and uptake mitigated against G1 NET.
Conclusions: There is no significant impact on normal organ biodistribution with increasing tumor burden on [\(^{68}\)Ga]DOTATOC PET/CT. Potential implications include increased normal organ dose with [\(^{177}\)Lu-DOTA]\(^0\)-D-Phe\(^1\)-Tyr\(^3\)-Octreotide and decreased absolute lesion detection with [\(^{68}\)Ga]DOTATOC in high NET burden.
More than 25 years after the first peptide receptor radionuclide therapy (PRRT), the concept of somatostatin receptor (SSTR)-directed imaging and therapy for neuroendocrine tumors (NET) is seeing rapidly increasing use. To maximize the full potential of its theranostic promise, efforts in recent years have expanded recommendations in current guidelines and included the evaluation of novel theranostic radiotracers for imaging and treatment of NET. Moreover, the introduction of standardized reporting framework systems may harmonize PET reading, address pitfalls in interpreting SSTR-PET/CT scans and guide the treating physician in selecting PRRT candidates. Notably, the concept of PRRT has also been applied beyond oncology, e.g. for treatment of inflammatory conditions like sarcoidosis. Future perspectives may include the efficacy evaluation of PRRT compared to other common treatment options for NET, novel strategies for closer monitoring of potential side effects, the introduction of novel radiotracers with beneficial pharmacodynamic and kinetic properties or the use of supervised machine learning approaches for outcome prediction. This article reviews how the SSTR-directed theranostic concept is currently applied and also reflects on recent developments that hold promise for the future of theranostics in this context.
PURPOSE:
We aimed to (a) elucidate the concordance of visual assessment of an initial I-ioflupane scan by a human interpreter with comparison to results using a fully automatic semiquantitative method and (b) to assess the accuracy compared to follow-up (f/u) diagnosis established by movement disorder specialists.
METHODS:
An initial I-ioflupane scan was performed in 382 patients with clinically uncertain Parkinsonian syndrome. An experienced reader performed a visual evaluation of all scans independently. The findings of the visual read were compared with semiquantitative evaluation. In addition, available f/u clinical diagnosis (serving as a reference standard) was compared with results of the human read and the software.
RESULTS:
When comparing the semiquantitative method with the visual assessment, discordance could be found in 25 (6.5%) of 382 of the cases for the experienced reader (ĸ = 0.868). The human observer indicated region of interest misalignment as the main reason for discordance. With neurology f/u serving as reference, the results of the reader revealed a slightly higher accuracy rate (87.7%, ĸ = 0.75) compared to semiquantification (86.2%, ĸ = 0.719, P < 0.001, respectively). No significant difference in the diagnostic performance of the visual read versus software-based assessment was found.
CONCLUSIONS:
In comparison with a fully automatic semiquantitative method in I-ioflupane interpretation, human assessment obtained an almost perfect agreement rate. However, compared to clinical established diagnosis serving as a reference, visual read seemed to be slightly more accurate as a solely software-based quantitative assessment.
Background: \(^{123}\)I-metaiodobenzylguanidine (mIBG) provides independent prognostic value for risk stratification among heart failure patients, but the use of concomitant medication should not impact its quantitative information. We aimed to evaluate the four most-prescribed antidepressants currently used as a first‑line treatment for patients with major depressive disorder (MDD) and their potential on altering mIBG imaging results.
Methods: The inhibition effect of four different types of antidepressants (desipramine, escitalopram, venlafaxine and bupropion) for MDD treatment on \(^{131}\)I-mIBG uptake was assessed by in-vitro cell uptake assays using human neuroblastoma SK-N-SH cells. The half maximal inhibitory concentration (IC50) of tracer uptake was determined from dose-response curves. To evaluate the effects of IV pretreatment with desipramine (1.5 mg/kg) and escitalopram (2.5, 15 mg/kg) on mIBG cardiac uptake, in-vivo planar 123I-mIBG scans in healthy New Zealand White Rabbits were conducted. Results: The IC50 values of desipramine, escitalopram, venlafaxine and bupropion on \(^{131}\)I-mIBG cellular uptake were 11.9 nM, 7.5 μM, 4.92 μM, and 12.9 μM, respectively. At the maximum serum concentration (Cmax, as derived by previous clinical trials), the inhibition rates of 131I-mIBG uptake were 90.6 % for desipramine, 25.5 % for venlafaxine, 11.7 % for bupropion and 0.72 % for escitalopram. A low inhibition rate for escitalopram in the cell uptake study triggered investigation of an in-vivo rabbit model: with dosage considerably higher than clinical practice, the non-inhibitory effect of escitalopram was confirmed. Furthermore, pretreatment with desipramine led to a marked reduction of cardiac 123I-mIBG uptake.
Conclusions: In the present in-vitro binding assay and in-vivo rabbit study, the selective-serotonin reuptake inhibitor escitalopram had no major impact on neuronal cardiac mIBG uptake within therapeutic dose ranges, while other types of first-line antidepressants for MDD treatment led to a significant decrease. These preliminary results warrant further confirmatory clinical trials regarding the reliability of cardiac mIBG imaging, in particular, if the patient’s neuropsychiatric status would not tolerate withdrawal of a potentially norepinephrine interfering antidepressant.
Purpose: Early identification of aggressive disease could improve decision-support in pancreatic neuroendocrine tumor (pNET) patients prior to peptide receptor radionuclide therapy (PRRT). The prognostic value of intratumoral textural features (TF) determined by baseline somatostatin receptor (SSTR)-PET before PRRT was analyzed.
Procedures: 31 patients with G1/G2 pNET were enrolled (G2, n=23/31). Prior to PRRT with [\(^{177}\)Lu]DOTATATE (mean, 3.6 cycles), baseline SSTR-PET/CT was performed. By segmentation of 162 (median per patient, 5) metastases, intratumoral TF were computed. The impact of conventional PET parameters (SUV\(_{mean/max}\)), imaging-based TF as well as clinical parameters (Ki67, CgA) for prediction of both progression-free (PFS) and overall survival (OS) after PRRT was evaluated.
Results: Within a median follow-up of 3.7y, tumor progression was detected in 21 patients (median, 1.5y) and 13/31 deceased (median, 1.9y). In ROC analysis, the TF Entropy, reflecting derangement on a voxel-by-voxel level, demonstrated predictive capability for OS (cutoff=6.7, AUC=0.71, p=0.02). Of note, increasing Entropy could predict a longer survival (>6.7, OS=2.5y, 17/31), whereas less voxel-based derangement portended inferior outcome (<6.7, OS=1.9y, 14/31). These findings were supported in a G2 subanalysis (>6.9, OS=2.8y, 9/23 vs. <6.9, OS=1.9y, 14/23). Kaplan-Meier analysis revealed a significant distinction between high- and low-risk groups using Entropy (n=31, p<0.05). For those patients below the ROC-derived threshold, the relative risk of death after PRRT was 2.73 (n=31, p=0.04). Ki67 was negatively associated with PFS (p=0.002); however, SUVmean/max failed in prognostication (n.s.).
Conclusions: In contrast to conventional PET parameters, assessment of intratumoral heterogeneity demonstrated superior prognostic performance in pNET patients undergoing PRRT. This novel PET-based strategy of outcome prediction prior to PRRT might be useful for patient risk stratification.
Purpose: Early identification of aggressive disease could improve decision-support in pancreatic neuroendocrine tumor (pNET) patients prior to peptide receptor radionuclide therapy (PRRT). The prognostic value of intratumoral textural features (TF) determined by baseline somatostatin receptor (SSTR)-PET before PRRT was analyzed.
Procedures: 31 patients with G1/G2 pNET were enrolled (G2, n=23/31). Prior to PRRT with [\(^{177}\)Lu]DOTATATE (mean, 3.6 cycles), baseline SSTR-PET/CT was performed. By segmentation of 162 (median per patient, 5) metastases, intratumoral TF were computed. The impact of conventional PET parameters (SUV\(_{mean/max}\)), imaging-based TF as well as clinical parameters (Ki67, CgA) for prediction of both progression-free (PFS) and overall survival (OS) after PRRT was evaluated.
Results: Within a median follow-up of 3.7y, tumor progression was detected in 21 patients (median, 1.5y) and 13/31 deceased (median, 1.9y). In ROC analysis, the TF Entropy, reflecting derangement on a voxel-by-voxel level, demonstrated predictive capability for OS (cutoff=6.7, AUC=0.71, p=0.02). Of note, increasing Entropy could predict a longer survival (>6.7, OS=2.5y, 17/31), whereas less voxel-based derangement portended inferior outcome (<6.7, OS=1.9y, 14/31). These findings were supported in a G2 subanalysis (>6.9, OS=2.8y, 9/23 vs. <6.9, OS=1.9y, 14/23). Kaplan-Meier analysis revealed a significant distinction between high- and low-risk groups using Entropy (n=31, p<0.05). For those patients below the ROC-derived threshold, the relative risk of death after PRRT was 2.73 (n=31, p=0.04). Ki67 was negatively associated with PFS (p=0.002); however, SUVmean/max failed in prognostication (n.s.).
Conclusions: In contrast to conventional PET parameters, assessment of intratumoral heterogeneity demonstrated superior prognostic performance in pNET patients undergoing PRRT. This novel PET-based strategy of outcome prediction prior to PRRT might be useful for patient risk stratification.
In diabetic cardiomyopathy, left ventricular (LV) diastolic dysfunction is one of the earliest signs of cardiac involvement prior to the definitive development of heart failure (HF). We aimed to explore the LV diastolic function using electrocardiography (ECG)-gated \(^{18}\)F-fluorodeoxyglucose positron emission tomography (\(^{18}\)F-FDG PET) imaging beyond the assessment of cardiac glucose utilization in a diabetic rat model. ECG-gated \(^{18}\)F-FDG PET imaging was performed in a rat model of type 2 diabetes (ZDF fa/fa) and ZL control rats at age of 13 weeks (n=6, respectively). Under hyperinsulinemic-euglycemic clamp to enhance cardiac activity, \(^{18}\)F-FDG was administered and subsequently, list-mode imaging using a dedicated small animal PET system with ECG signal recording was performed. List-mode data were sorted and reconstructed into tomographic images of 16 frames per cardiac cycle. Left ventricular functional parameters (systolic: LV ejection fraction (EF), heart rate (HR) vs. diastolic: peak filling rate (PFR)) were obtained using an automatic ventricular edge detection software. No significant difference in systolic function could be obtained (ZL controls vs. ZDF rats: LVEF, 62.5±4.2 vs. 59.4±4.5%; HR: 331±35 vs. 309±24 bpm; n.s., respectively). On the contrary, ECG-gated PET imaging showed a mild but significant decrease of PFR in the diabetic rats (ZL controls vs. ZDF rats: 12.1±0.8 vs. 10.2±1 Enddiastolic Volume/sec, P<0.01). Investigating a diabetic rat model, ECG-gated \(^{18}\)F-FDG PET imaging detected LV diastolic dysfunction while systolic function was still preserved. This might open avenues for an early detection of HF onset in high-risk type 2 diabetes before cardiac symptoms become apparent.
The heart failure (HF) epidemic continues to rise with coronary artery disease (CAD) as one of its main causes. Novel concepts for risk stratification to guide the referring cardiologist towards revascularization procedures are of significant value. Myocardial perfusion imaging (MPI) using single-photon emission computed tomography (SPECT) agents has demonstrated high accuracy for the detection of clinically relevant stenoses. With positron emission tomography (PET) becoming more widely available, mainly due to its diagnostic performance in oncology, perfusion imaging with that modality is more practical than in the past and overcomes existing limitations of SPECT MPI. Advantages of PET include more reliable quantification of absolute myocardial blood flow, the routine use of computed tomography for attenuation correction, a higher spatiotemporal resolution and a higher count sensitivity. Current PET radiotracers such as rubidium-82 (half-life, 76 sec), oxygen-15 water (2 min) or nitrogen-13 ammonia (10 min) are labeled with radionuclides with very short half-lives, necessitating that stress imaging is performed under pharmacological vasodilator stress instead of exercise testing. However, with the introduction of novel 18F-labeled MPI PET radiotracers (half-life, 110 min), the intrinsic advantages of PET can be combined with exercise testing. Additional advantages of those radiotracers include, but are not limited to: potentially improved cost-effectiveness due to the use of pre-existing delivery systems and superior imaging qualities, mainly due to the shortest positron range among available PET MPI probes. In the present review, widely used PET MPI radiotracers will be reviewed and potential novel 18F-labeled perfusion radiotracers will be discussed.
We aimed to explore the impact of ageing on 11C-Hydroxyephedrine (11C-HED) uptake in the healthy rat heart in a longitudinal setting. To investigate a potential cold mass effect, the influence of specific activity on cardiac 11C-HED uptake was evaluated: 11C-HED was synthesized by N-methylation of (−)-metaraminol as the free base (radiochemical purity >95%) and a wide range of specific activities (0.2–141.9 GBq/μmol) were prepared. \(^{11}\)C-HED (48.7±9.7MBq, ranged 0.2–60.4μg/kg cold mass) was injected in healthy Wistar Rats. Dynamic 23-frame PET images were obtained over 30 min. Time activity curves were generated for the blood input function and myocardial tissue. Cardiac 11C-HED retention index (%/min) was calculated as myocardial tissue activity at 20-30 min divided by the integral of the blood activity curves. Additionally, the impact of ageing on myocardial 11CHED uptake was investigated longitudinally by PET studies at different ages of healthy Wistar Rats. A dose-dependent reduction of cardiac 11C-HED uptake was observed: The estimated retention index as a marker of norepinephrine function decreased at a lower specific activity (higher amount of cold mass). This observed high affinity of 11C-HED to the neural norepinephrine transporter triggered a subsequent study: In a longitudinal setting, the 11C-HED retention index decreased with increasing age. An age-related decline of cardiac sympathetic innervation could be demonstrated. The herein observed cold mass effect might increase in succeeding scans and therefore, 11C-HED microPET studies should be planned with extreme caution if one single radiosynthesis is scheduled for multiple animals.
Purpose: We aim to provide an overview of the conventional single photon emission computed tomography (SPECT) and emerging positron emission tomography (PET) catecholamine analogue tracers for assessing myocardial nerve integrity, in particular focusing on \(^{18}\)F-labeled tracers.
Results: Increasingly, the cardiac sympathetic nervous system (SNS) is being studied by non-invasive molecular imaging approaches. Forming the backbone of myocardial SNS imaging, the norepinephrine (NE) transporter at the sympathetic nerve terminal plays a crucial role for visualizing denervated myocardium: in particular, the single-photon-emitting NE analogue \(^{123}\)I-meta-Iodobenzylguanidine (\(^{123}\)I-mIBG) has demonstrated favorable results in the identification of patients at a high risk for cardiac death. However, cardiac neuronal PET agents offer several advantages inlcuding improved spatio-temporal resolution and intrinsic quantifiability. Compared to their \(^{11}\)C-labeled counterparts with a short half-life (20.4 min), novel \(^{18}\)F-labeled PET imaging agents to assess myocardial nerve integrity have the potential to revolutionize the field of SNS molecular imaging: The longer half-life of \(^{18}\)F (109.8 min) allows for more flexibility in the study design and delivery from central cyclotron facilities to smaller hospitals may lead to further cost reduction. A great deal of progress has been made by the first in-human studies of such \(^{18}\)F-labeled SNS imaging agents. Moreover, dedicated animal platforms open avenues for further insights into the handling of radiolabeled catecholamine analogues at the sympathetic nerve terminal. Conclusions: \(^{18}\)F-labeled imaging agents demonstrate key properties for mapping cardiac sympathetic nerve integrity and might outperform current SPECT-based or \(^{11}\)C-labeled tracers in the long run.
Purpose: The metabolically most active lesion in 2-deoxy-2-(\(^{18}\)F)fluoro-D-glucose (\(^{18}\)F-FDG) PET/CT can predict progression-free survival (PFS) in patients with medullary thyroid carcinoma (MTC) starting treatment with the tyrosine kinase inhibitor (TKI) vandetanib. However, this metric failed in overall survival (OS) prediction. In the present proof of concept study, we aimed to explore the prognostic value of intratumoral textural features (TF) as well as volumetric parameters (total lesion glycolysis, TLG) derived by pre-therapeutic \(^{18}\)F-FDG PET.
Methods: Eighteen patients with progressive MTC underwent baseline \(^{18}\)F-FDG PET/CT prior to and 3 months after vandetanib initiation. By manual segmentation of the tumor burden at baseline and follow-up PET, intratumoral TF and TLG were computed. The ability of TLG, imaging-based TF, and clinical parameters (including age, tumor marker doubling times, prior therapies and RET (rearranged during transfection) mutational status) for prediction of both PFS and OS were evaluated.
Results: The TF Complexity and the volumetric parameter TLG obtained at baseline prior to TKI initiation successfully differentiated between low- and high-risk patients. Complexity allocated 10/18 patients to the high-risk group with an OS of 3.3y (vs. low-risk group, OS=5.3y, 8/18, AUC=0.78, P=0.03). Baseline TLG designated 11/18 patients to the high-risk group (OS=3.5y vs. low-risk group, OS=5y, 7/18, AUC=0.83, P=0.005). The Hazard Ratio for cancer-related death was 6.1 for Complexity (TLG, 9.5). Among investigated clinical parameters, the age at initiation of TKI treatment reached significance for PFS prediction (P=0.02, OS, n.s.).
Conclusions: The TF Complexity and the volumetric parameter TLG are both independent parameters for OS prediction.
Objectives: Recently, the standardized reporting and data system for prostate-specific membrane antigen (PSMA)-targeted positron emission tomography (PET) imaging studies, termed PSMA-RADS version 1.0, was introduced. We aimed to determine the interobserver agreement for applying PSMA-RADS to imaging interpretation of 18F-DCFPyL PET examinations in a prospective setting mimicking the typical clinical work-flow at a prostate cancer referral center.
Methods: Four readers (two experienced readers (ER, > 3 years of PSMA-targeted PET interpretation experience) and two inexperienced readers (IR, < 1 year of experience)), who had all read the initial publication on PSMA-RADS 1.0, assessed 50 18F-DCFPyL PET/computed tomography (CT) studies independently. Per scan, a maximum of 5 target lesions were selected by the observers and a PSMA-RADS score for every target lesion was recorded. No specific pre-existing conditions were placed on the selection of the target lesions, although PSMA-RADS 1.0 suggests that readers focus on the most highly avid or largest lesions. An overall scan impression based on PSMA-RADS was indicated and interobserver agreement rates on a target lesion-based, on an organ-based, and on an overall PSMA-RADS score-based level were computed.
Results: The number of target lesions identified by each observer were as follows: ER 1, 123; ER 2, 134; IR 1, 123; and IR 2, 120. Among those selected target lesions, 125 were chosen by at least two individual observers (all four readers selected the same target lesion in 58/125 (46.4%) instances, three readers in 40/125 (32%) and two observers in 27/125 (21.6%) instances). The interobserver agreement for PSMA-RADS scoring among identical target lesions was good (intraclass correlation coefficient (ICC) for four, three and two identical target lesions, ≥0.60, respectively). For lymph nodes, an excellent interobserver agreement was derived (ICC=0.79). The interobserver agreement for an overall scan impression based on PSMA-RADS was also excellent (ICC=0.84), with a significant difference for ER (ICC=0.97) vs. IR (ICC=0.74, P=0.005).
Conclusions: PSMA-RADS demonstrates a high concordance rate in this study, even among readers with different levels of experience. This suggests that PSMA-RADS can be effectively used for communication with clinicians and can be implemented in the collection of data for large prospective trials.
Both prostate-specific membrane antigen (PSMA)- and somatostatin receptor (SSTR)-targeted positron emission tomography (PET) imaging agents for staging and restaging of prostate carcinoma or neuroendocrine tumors, respectively, are seeing rapidly expanding use. In addition to diagnostic applications, both classes of radiotracers can be used to triage patients for theranostic endoradiotherapy. While interpreting PSMA- or SSTR-targeted PET/computed tomography (CT) scans, the reader has to be aware of certain pitfalls. Adding to the complexity of the interpretation of those imaging agents, both normal biodistribution, and also false-positive and -negative findings differ between PSMA- and SSTR-targeted PET radiotracers. Herein summarized under the umbrella term molecular imaging reporting and data systems (MI-RADS), two novel RADS classifications for PSMA- and SSTR-targeted PET imaging are described (PSMA- and SSTR-RADS). Both framework systems may contribute to increase the level of a reader’s confidence and to navigate the imaging interpreter through indeterminate lesions, so that appropriate workup for equivocal findings can be pursued. Notably, PSMA- and SSTR-RADS are structured in a reciprocal fashion, i.e. if the reader is familiar with one system, the other system can readily be applied as well. In the present review we will discuss the most common pitfalls on PSMA- and SSTR-targeted PET/CT, briefly introduce PSMA- and SSTR-RADS, and define a future role of the umbrella framework MI-RADS compared to other harmonization systems.