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Sonstige beteiligte Institutionen
- Fraunhofer-Institut für Silicatforschung ISC (8)
- Helmholtz Institute for RNA-based Infection Research (HIRI) (7)
- Universitätsklinikum Würzburg (5)
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- Technische Hochschule Nürnberg Georg Simon Ohm (3)
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- B-1911-2015 (1)
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- C-2593-2016 (1)
- D-1250-2010 (1)
- D-3057-2014 (1)
- I-5818-2014 (1)
- J-8841-2015 (1)
- M-1240-2017 (1)
- N-2030-2015 (1)
- N-3741-2015 (1)
EU-Project number / Contract (GA) number
- 311781 (1)
- 320377 (1)
- EU (FP7/ 2007-2013) (1)
Background and Aims: PMA is a recently described rare tumor entity occuring most often in young children. Due the worse outcome of PMA-patients as compared to children with pilocytic astrocytoma (PA), it has received a grade II assignment in the latest WHO classification. Nevertheless, increasing evidence suggests that the two tumor types are indeed pathologically and genetically related. The radiological differentiation of PMAs from PAs is challenging and the limited available data could not yet provide unequivocal distinguishing imaging features. Furthermore, it is not completely clarified whether PMA cases are associated with a higher rate of CSF dissemination compared to similarly young patients with PA. The aim of our study was firstly to compare MR/CT imaging features of these tumors, and secondly, to evaluate the occurrence of CSF dissemination.
Material and Methods: The study population included 15 children with PMA and 32 children with PA. A third group consisted of eight children with PAs with focal pilomyxoid features. All cases had been registered in the German multicenter SIOP/HIT-LGG trials. The initial MRIs (and CT scans, if available) at establishing the diagnosis were retrospectively analyzed according to standardized criteria and the findings compared between PMAs and PAs. Furthermore, we compared the occurrence of imaging evidences of CSF tumor dissemination between children with PMA and PA, respectively.
Results: The imaging appearance of PMAs and PAs was very similar. However, PAs tended to show more frequently cystic components (p=0.03). As opposed to PAs, PMAs did not have large tumor cysts. We did not find differences with respect to tumor size and tumor margin. Gadolinium enhancement of PMAs was significantly more frequently homogeneous (p=0.006). PMAs appeared to show more often intratumoral hemorrhages (p=0.047). Furthermore, suprasellar PMAs tended to have a more homogeneus texture on T2-weighted MR images (p=0.026). Within the subgroup < 6 years of age the PMA histology tended to have a larger effect on the occurrence of CSF dissemination than the age (p=0.05 vs.0.12).
Conclusions: Although the radiological appearance of PMAs and PAs is similar, some imaging features, like enhancement pattern or presence of cysts or hemorrhage may help differentiating these low-grade gliomas. Our results corroborate previous scarce data suggesting higher rate of CSF dissemination in PMAs, even in the youngest patient population. Thus, in young children with a chiasmatic-hypothalamic tumor suggestive of a PMA, an intensive search for CSF dissemination along the entire neuraxis should be performed.
In a three-year study the current aeolian transportation processes were examined in a linear dune area previously used for grazing near Nizzana at the Israeli-Egyptian border. The research area was subject to heavy grazing across the border, which led to the total destruction of the natural vegetation in the period of 1967 to 1982. As a consequence, intensified aeolian activity and significant changes of the morphology of the dunes were observed. After the end of the grazingg on the Israeli side, a rapid return of the vegetation in the interdune corridors and on the footslopes of the dunes took place. In addition also a reduction of obviously active areas on the dune crests was observed. The situation on Egyptian territory west the border remained unchanged until today. This study is aimed at understanding the changed aeolian morphodynamics east the border. The emphasis was placed on the investigation of the spatial and temporal distribution of aeolian sand transport as well as on the influencing factors morphology, surface condition and vegetation.
Introduction.
Mobile health (mHealth) integrates mobile devices into healthcare, enabling remote monitoring, data collection, and personalized interventions. Machine Learning (ML), a subfield of Artificial Intelligence (AI), can use mHealth data to confirm or extend domain knowledge by finding associations within the data, i.e., with the goal of improving healthcare decisions. In this work, two data collection techniques were used for mHealth data fed into ML systems: Mobile Crowdsensing (MCS), which is a collaborative data gathering approach, and Ecological Momentary Assessments (EMA), which capture real-time individual experiences within the individual’s common environments using questionnaires and sensors. We collected EMA and MCS data on tinnitus and COVID-19. About 15 % of the world’s population suffers from tinnitus.
Materials & Methods.
This thesis investigates the challenges of ML systems when using MCS and EMA data. It asks: How can ML confirm or broad domain knowledge? Domain knowledge refers to expertise and understanding in a specific field, gained through experience and education. Are ML systems always superior to simple heuristics and if yes, how can one reach explainable AI (XAI) in the presence of mHealth data? An XAI method enables a human to understand why a model makes certain predictions. Finally, which guidelines can be beneficial for the use of ML within the mHealth domain? In tinnitus research, ML discerns gender, temperature, and season-related variations among patients. In the realm of COVID-19, we collaboratively designed a COVID-19 check app for public education, incorporating EMA data to offer informative feedback on COVID-19-related matters. This thesis uses seven EMA datasets with more than 250,000 assessments. Our analyses revealed a set of challenges: App user over-representation, time gaps, identity ambiguity, and operating system specific rounding errors, among others. Our systematic review of 450 medical studies assessed prior utilization of XAI methods.
Results.
ML models predict gender and tinnitus perception, validating gender-linked tinnitus disparities. Using season and temperature to predict tinnitus shows the association of these variables with tinnitus. Multiple assessments of one app user can constitute a group. Neglecting these groups in data sets leads to model overfitting. In select instances, heuristics outperform ML models, highlighting the need for domain expert consultation to unveil hidden groups or find simple heuristics.
Conclusion.
This thesis suggests guidelines for mHealth related data analyses and improves estimates for ML performance. Close communication with medical domain experts to identify latent user subsets and incremental benefits of ML is essential.
Ziel der prospektiven, klinischen und monozentrischen Beobachtungsstudie war es, die Eigenschaften der durch die DC/TMD (Diagnostic Criteria for Temporomandibular Disorders) eingeführten neuen Schemata der Schmerzzeichnung für Patienten mit Gesichtsschmerzen zu untersuchen. Der Fokus lag dabei zum einen auf der Reliabilität der Schmerzzeichnung sowie auf der Korrelation mit dem Grad der Schmerzchronifizierung und einer potentiellen psychischen Störung.
218 Patienten mit orofazialen Schmerzen wurden konsekutiv rekrutiert und bearbeiteten einen Fragebogen mit GCPS V.2, PHQ-9 und der Schmerzzeichnung. Eine Untergruppe füllte den Fragebogen nach einer fünfwöchigen Akupunkturtherapie zur Erhebung einer möglichen Veränderung der Schmerzintensität erneut aus. Eine weitere Untergruppe bearbeitete die Fragebögen erneut am selben Tag. Mit einem mehrschrittigen Auswertungsverfahren wurden alle Schmerzzeichnungen ausgewertet.
Die Studienpopulation bestand mit 77,1% aus weiblichen Patienten. Für 44,5% der Kohorte ergab sich eine durch orofaziale Schmerzen bedingte Beeinträchtigung. Die Auswertungsmethoden der Schmerzzeichnung ergaben starke geschlechtsspezifische Unterschiede. Das laterale Kopfschema wies sowohl für Frauen als auch für Männer mit Schmerzbeeinträchtigung signifikant mehr markierte Regionen auf im Vergleich zu Patienten ohne Schmerzbeeinträchtigung. Männer mit dysfunktionalen Schmerzen zeigten zudem eine signifikant höhere prozentual markierte Schmerzoberfläche. Für die männlichen Patienten zeigte sich außerdem für die Anzahl der Regionen und die prozentuale Markierung einen signifikanten Zusammenhang mit einer depressiven Störung. Für Frauen konnten diesbezüglich kein Zusammenhang festgestellt werden und auch der modifizierte Ransford-Score stellte für beide Geschlechter kein valides Screeninginstrument dar, um psychische Beeinträchtigungen zu identifizieren. Die Wiederholungszuverlässigkeit der Schmerzzeichnung war signifikant hoch für das Kopfschema und das intraorale Schema, nicht aber für das Ganzkörperschema.
Insgesamt erwiesen sich die neuen Schemata der Schmerzzeichnung im Rahmen einer CMD Diagnostik als vorteilhaft. Das Geschlecht des Patienten, schmerzbedingte Funktionsstörungen sowie psychische Beeinträchtigungen beeinflussen die durch die Schmerzzeichnung erzielten Ergebnisse unterschiedlich und bestätigen eine vielschichtige Ätiologie der Erkrankung. Die Ergebnisse verweisen zudem auf die Relevanz einer getrennten Betrachtung der Geschlechter in zukünftigen Studien mit orofazialen Schmerzpatienten. Die Summe aller Regionen des Kopfschemas von lateral könnte hinsichtlich der Einschätzung des Ausmaßes einer Schmerzchronifizierung künftig als Auswertungskriterium der Schmerzzeichnung Anwendung finden.
Viele humane Sarkome sind durch spezifische chromosomale Translokationen oder typische genetische Amplifikationen definiert, welche in der Differentialdiagnostik insbesondere in Fällen, bei denen klinische Daten, Morphologie und Immunhistochemie alleine nicht ausreichend wegweisend sind. Die Formalin-fixiertem Paraffin-eingebetteten (FFPE-) Gewebe von 15 Ewing-Sarkomen, 4 Klarzellsarkomen, 9 Synovialsarkomen, 4 alveolären und 7 embryonalen Rhabdomyosarkomen und 25 Liposarkomen verschiedenen Subtyps wurden mittels Fluoreszenz-in-situ-Hybridisierung (FISH) untersucht um ein Sarkom-spezifisches FISH-Sondenset zur Detektion spezifischer chromosomaler Aberrationen in der Routinediagnostik zu etablieren. Es konnte gezeigt werden, dass die FISH in diesem Aufgabenfeld im Vergleich zur PCR ebenfalls eine hoch effiziente zytogenetische Methode mit hoher Spezifität und hohen positiven Vorhersagewerten mit dem Vorteil der unproblematischen Anwendung an FFPE-Geweben ist. Zur Detektion des Isochromosom 12p , i(12p), als Beispiel für komplexere chromosmale Aberrationen, wurden 7 FFPE-Gewebe aus Keimzelltumoren mit 12p- und 12q-detektierenden FISH-Sonden hybridisiert. Die Detektion des i(12p) konnte im Rahmen dieser Arbeit mittels FISH nicht erreicht werden. Zusammenfassend ist die FISH eine hoch effiziente zytogenetische Methode zur Detektion spezifischer chromosomaler Aberrationen in FFPE-Geweben aus humanen Sarkomen mit hoher Eignung zur Anwendung in der Routinediagnostik.
Die vorliegende Arbeit befasst sich mit den Gerichtsordnungen in würzburgischen Städten des 16.Jahrhunderts. Dabei werden insbesondere die Gerichtsordnungen dargestellt, die unter der Regierung Julius Echters erlassen wurden. So soll versucht werden, die Ordnungen Julius Echters sowohl aus dem alten Herkommen als auch von ihrer Entstehungsgeschichte her zu erklären.
The work presented in this thesis was mainly targeted at exploring the capabilities of evaporation based LC detectors as well as further alternatives for the control of impurities in substances not exhibiting a suitable chromophore for UV-detection. In the course of the work carried out, several new methods for the identification, impurities control and composition testing of APIs were elaborated. An evaporation based detector that entered into the field of pharmaceutical analysis in the recent years was the Evaporative Light Scattering Detector (ELSD). However, non-reproducible spikes were reported when injecting concentrated test solutions as they are usually required for the control of impurities. The reasons, for the appearance of these spikes as well as possibilities for their avoidance were explored in a systematic study. Moreover, the dependence of the detector sensitivity on different eluent composition, eluent flow-rate and ELSD settings was investigated. In the course of the revision of the Ph.Eur. monographs for aspartic acid and alanine, a C18 reversed phase ion-pair LC method using 1 mmol/L of perfluoroheptanoic acid as an ion-pair reagent and a charged aerosol detector (CAD) was developed and fully validated for the purity control of Asp. The method was capable of separating the organic acids and major amino acids known to occur as process related impurities. With a slight modification, the method was also applicable for the purity control of Ala. Based on the developed LC-CAD method for the impurity control of alanine, a comparative study of the performance characteristics of different evaporation based LC detectors, i.e. ELSD, CAD and the recently developed Nano Quantity Analyte Detector (NQAD) was carried out. Additionally, an MS detector and qNMR were included in this study. It was found that the control of impurities in Alanine at an ICH conform level could be ensured using LC coupled to CAD, MSD and NQAD detection as well as by the use of qNMR. In terms of performance, prize and ease of use CAD and NQAD were found to be the most suitable alternatives. In terms of repeatability and sensitivity, the CAD appeared slightly superior to the NQAD. The quality of streptomycin sulfate is not sufficiently controlled by the current Ph.Eur. monograph in that an appropriate test for the control of the related substances is missing. A study was carried out to develop a C18 reversed phase ion-pair LC method using pentafluoropropionic acid as an ion-pair reagent and a CAD for the identification and control of the related substances. The developed method allowed the separation of 21 impurities from streptomycin. Moreover, coupling of the method to MS allowed the identification of the separated impurities. The method was shown to be sufficiently sensitive to control the related substances with a disregard limit of 0.1% as it is normally applied in the Ph.Eur. for products derived from fermentation. Currently, the aescin content of horse-chestnut standardized dry extract is determined using a complex and laborious photometric determination. A more selective LC-UV assay determination for beta-aescin has been proposed for the Ph.Eur. draft monograph of horse-chestnut standardized dry extract. Possibilities were explored to further improve the LC-method using detection by CAD. It was demonstrated that by the use of a modified LC-CAD method several problems related to the differences in the UV-response of the various components contained in the active aescin fraction could be eliminated. Moreover the proposed reference standard strategy was reviewed. Eventually, it was demonstrated on the example of two different clusters of pharmacologically active peptides how low energy collision induced dissociation mass spectrometry (low energy CID-MS) can successfully be used for identification testing in pharmacopoeial monographs. In this respect, the combination of a direct confirmation of the molecular mass via the m/z-ratio of the molecule ions with structural sequence information obtained by low energy CID-MS experiments was found to deliver a higher degree of certainty of the identity of a given substance than the set of tests currently described in the monographs. A significant gain in efficiency and throughput and important reduction of the amount of sample consumed during testing were identified as being additional advantages of this approach. Taken together, it could be demonstrated on various examples how recent technological advancements in the field of analytical chemistry can contribute to improve the quality control of APIs.
Frizzled (FZD) are highly conserved receptors that belong to class F of the G protein-coupled receptor (GPCR) superfamily. They are involved in a great variety of processes during embryonic development, organogenesis, and adult tissue homeostasis. In particular, FZD5 is an important therapeutic target due to its involvement in several pathologies, such as tumorigenesis. Nevertheless, little is known regarding the activation of FZD receptors and the signal initiation, and their GPCR nature has been debated. In order to investigate the activation mechanism of these receptors, FRET (Förster Resonance Energy Transfer)-based biosensors for FZD5 have been developed and characterized. A cyan fluorescent protein (CFP) was fused to the C-terminus of the receptor and the specific FlAsH-binding sequence (CCPGCC) was inserted within the 2nd or the 3rd intracellular loop. Single-cell FRET experiments performed using one of these sensors, V5-mFZD5-FlAsH436-CFP, reported structural rearrangements in FZD5 upon stimulation with the endogenous ligand WNT-5A. These movements are similar to those observed in other GPCRs using the same technique, which suggests an activation mechanism for FZD reminiscent of GPCRs. Furthermore, stimulation of the FZD5 FRET-based sensor with various recombinant WNT proteins in a microplate FRET reader allowed to obtain concentration-response curves for several ligands, being possible to distinguish between full and partial agonists. This technology allowed to address the selectivity between WNTs and FZD5 using a full-length receptor in living cells. In addition, G protein FRET-based sensors revealed that WNT-5A specifically induced Gαq activation mediated by FZD5, but not Gαi activation. Other WNT proteins were also able to induce Gαq activation, but with lower efficacy than WNT-5A. In addition, a dual DAG/calcium sensor further showed that WNT-5A stimulation led to the activation of the Gαq-dependent signaling pathway mediated by FZD5, which outcome was the activation of Protein Kinase C (PKC) and the release of intracellular calcium. Altogether, these data provide evidence that the activation process of FZD5 resembles the general characteristics of class A and B GPCR activation, and this receptor also mediates the activation of the heterotrimeric Gαq protein and its downstream signaling pathway. In addition, the FZD5 receptor FRET-based sensor provides a valuable tool to characterize the pharmacological properties of WNTs and other potential ligands for this receptor.
In this work we wanted to investigate the role of NFATc1 in lymphocyte physiology and in pathological conditions (eg. psoriasis). NFATc1 is part of the signal transduction
pathways that regulates B cells activation and function. NFATc1 has different isoforms that are due to different promoters (P1 and P2), polyadenylation and alternative splicing. Moreover, we tried to elucidate the points of interactions between the NFAT and the NF-κB pathways in
activated B-cell fate. NFAT and NF-κB factors share several properties, such as a similar mode of induction and architecture in their DNA binding domain. We used mice which over-express a constitutive active version of NFATc1/α in their B cells with -or without- an ablated IRF4. IRF4 inhibits cell cycle progression of germinal center B cell-derived Burkitt’s lymphoma cells and
induces terminal differentiation toward plasma cells. Our experiments showed that a ‘double hit’ in factors affecting B cell activation (NFATc1 in this case) and late B cell Differentiation (IRF4 in this case) alter the development of the B cells, lead to increase in their numbers and increase in stimulation induced proliferation. Therefore, the overall picture indicates a link between these 2 genes and probable carcinogenic alterations that may occur in B cells.
We also show that in splenic B cells, c-Rel (of the NF-κB canonical pathway) Support the induction of NFATc1/αA through BCR signals. We also found evidence that the lack of NFATc1 affects the expression of Rel-B (of the NF-κB non-canonical pathway). These data suggest a tight interplay between NFATc1 and NF-κB in B cells, influencing the competence of B cells and their functions in peripheral tissues.
We also used IMQ-induced psoriasis-like inflammation on mice which either lack NFATc1 from B cell. Psoriasis is a systemic chronic immunological disease characterized
primarily by abnormal accelerated proliferation of the skin keratinocytes. In psoriasis, the precipitating event leads to immune cell activation. Our experiments showed that NFATc1 is needed for the development of psoriasis. It also showed that IL-10 is the link that enables NFAT
from altering the B cell compartment (eg Bregs) in order to affect inflammation. The important role of B cell in psoriasis is supported by the flared up psoriasis-like inflammation in mice that lack B cells. Bregs is a special type of B cells that regulate other B cells and T cells; tuning the immunological response through immunomodulatory cytokines.
Das kindliche Glaukom ist eine seltene Erkrankung. Die Patienten müssen ein ganzes Leben lang beobachtet werden. Eine erfolgreiche Operation verlängert zwar die Kontrollintervalle, kann sie aber nicht ersetzen. Ungefähr drei Viertel der Glaukomaugen wurde ein- oder zweimal operiert, bei den übrigen mussten drei Operationen oder mehr pro Auge durchgeführt werden. Der intraokulare Druck ist ein wichtiger Parameter für kurzfristige Kontrollen. Nach erfolgreicher Operation sinkt der intraokulare Druck unter 21 mmHg bei 72,1% der Glaukomaugen ohne Medikamente und bei 95,6% mit Medikamenten. Die Achsenlänge ist ein wichtiger Parameter für die langfristige Kontrolle. Der Unterschied zwischen der Achsenlänge der Glaukomaugen und dem altersentsprechenden Normwert blieb bei allen untersuchten Glaukomaugen signifikant, ebenso beim unilateralen kindlichen Glaukom zwischen Achsenlänge der Glaukomaugen und ihren Partneraugen. Bei operierten Glaukomaugen verläuft die Achsenlänge mit zunehmendem Alter ungefähr parallel zur Normkurve mit einem mittleren Unterschied von 1,8 ± 1,2 mm. Der Unterschied zwischen dem Hornhautdurchmesser der Glaukomaugen bei der ersten und letzten Untersuchung ist nicht signifikant. Die Werte des Hornhautdurchmessers zeigen mit zunehmendem Alter einen horizontalen Verlauf, insbesondere nach dem ersten Lebensjahr. Beim unilateralen kindlichen Glaukom verläuft der Hornhautdurchmesser parallel zum Hornhautdurchmesser der Partneraugen mit einem mittleren Unterschied von 1,0 ± 0,6 mm. Trotz eines Visus von 0,32 oder besser bei mehr als der Hälfte der Glaukomaugen blieb die Sehschärfe außerhalb des unteren Normbereichs. Zwei Drittel der unilateralen kindlichen Glaukomaugen zeigten bei der letzten Untersuchung eine Amblyopie von 2 Visusstufen oder mehr. Die Myopie ist der häufigste Refraktionsfehler. Ein Drittel der Glaukompatienten entwickelten einen Strabismus. Die Anisometropie ist der häufigste Grund der Okklusion bei der Mehrzahl der Glaukompatienten mit oder ohne Strabismus. Intaktes Stereosehen ist bei mehr als der Hälfte der Patienten nachweisbar. Die Korrelation zwischen IOD und Achsenlänge bei der letzten Untersuchung ist deutlich signifikant. Eine Abnahme der Achsenlänge während der Verlaufsbeobachtung wurde nur bei Augen mit IOD niedriger als 17 mmHg beobachtet. Die Achsenlänge wies eine signifikante Korrelation zu Visus und Myopie auf. Die Korrelation zum Hornhautdurchmesser war nur bei der Erstuntersuchung signifikant. Ein Hornhautdurchmesser mehr als oder 14 mm, eine mittlere bis höhergradige Myopie und ein Visus von weniger als oder 0,16 wurden häufiger festgestellt, wenn die Achsenlänge 24,5 mm überschritt. Der Visus mehr als oder 1,0 wurde nur bei Achsenlänge niedriger als oder 24,5 mm erreicht. Die Achsenlänge erwies sich gegenüber den Hornhautdurchmesser als der sicherere Parameter in der Diagnostik und der Verlaufskontrolle des kindlichen Glaukoms.
Basierend auf dem Auslauftrichter nach DIN ISO 4324 wurde ein neuartiges Gerät zur Bestimmung der Fließeigenschaften von Schüttgütern entwickelt. Der modifizierte Auslauftrichter zerstört mit Hilfe eines speziellen Rührwerkzeuges ausflussverhindernde Schüttgutbrücken. Durch Charakterisierung des Ausflussverhaltens eines Modellschüttgutes (Aerosil 200/Maisstärke) konnten verschiedene Prozessparameter identifiziert werden, die eine Abhängigkeit von unterschiedlichen Fließeigenschaften des Modellschüttgutes aufweisen. Mit Hilfe des modifizierten Auslauftrichters wurden im weiteren Teil dieser Arbeit binäre Mischungen aus einem Fließregulierungsmittel und Maisstärke auf ihr Fließverhalten untersucht. Hierdurch konnte eine Aussage über das fließregulierende Potential der Nanomaterialien erhalten werden. Es zeigte sich, dass die Primärpartikelgröße, die Aggregatfestigkeit und der hydrophile/hydrophobe Charakter der jeweiligen Nanomaterialien einen entscheidenden Einfluss auf das fließregulierende Potential der Nanomaterialien besitzten.
HINTERGRUND: Der brain-derived neurotrophic factor (BDNF) reguliert die synaptische Plastizität und spielt somit eine wichtige Rolle in der Gedächtnisbildung und -erhaltung. Deswegen gibt es eingehende Untersuchungen dieses neurotrophischen Faktors in Bezug auf Demenzerkrankungen, vor allem der Alzheimer Demenz. In dieser Studie wurde nach einem Zusammenhang zwischen BDNF Blutplasmawerten und der Alzheimer Demenz in einer longitudinalen Kohortenstudie, der Vienna-Transdanube-Aging(VITA)-Studie gesucht. METHODEN: Die VITA-Studie ist eine kommunale Kohortenstudie aller 75jährigen Einwohner einer geographischen Region Wiens. Es wurden die BDNF Plasmawerte der Basisuntersuchung und der ersten Folgeuntersuchung 30 Monate später als mögliche Biomarker für die Alzheimer Demenz untersucht. Assoziationen zwischen BDNF Plasmawerten und anderen epidemiologischen Eckdaten wurden ebenfalls analysiert. ERGEBNISSE: Wir konnten keine Assoziation zwischen BDNF Plasmawerten und der Entwicklung oder einer bereits bestehenden Alzheimer Demenz finden. Geschlecht, Body-Maß-Index und Depression stellten sich als Komorbiditäts-Faktoren von Demenz-erkrankungen dar. SCHLUSSFOLGERUNG: BDNF Plasmawerte sind diesen Ergebnissen nach kein so viel versprechender molekularer Marker für Alzheimer Demenz wie erhofft. BDNF wird jedoch weiterhin in vielen interessanten Studienprotokollen untersucht, da es sowohl im Blutserum als auch im Hirngewebe nachgewiesen werden kann und somit viele diagnostische und therapeutische Ansätze inspiriert.
Sustainability has become a critical topic in all areas of supply chain management. As discussed earlier, drivers for this development can be identified as both internal and external phenomena. Since customers are one of the key stakeholders in supply chain management, special attention is paid to the impact of costumers´ behavior on sustainable supply chain design decisions. In this context, two main research questions were analyzed:
1.What is the appropriate way to design a supply chain according to environmentally-oriented requirements of customers?
2.What is the impact of customer´s behavior regarding both usage and return of products on supply chain design decisions in an environmentally conscious closed-loop supply chain environment?
Therefore, three different optimization models with various main aspects are developed. To illustrate how the presented models can be applied in practical problem cases, guidelines for implementing an environmentally supply chain design project are presented.
This work developed during the first funding period of the subproject B05 in the framework of the interdisciplinary research consortium TRR 225 ‘From the Fundamentals of Biofabrication toward functional Tissue Models’ and was part of a cooperation between the Orthopedic Department represented by Prof. Dr. Regina Ebert and the Institute of Organic Chemistry represented by Prof. Dr. Jürgen Seibel.
This project dealed with cellular behavior during the bioprinting process and how to influence it by modifying the cell glycocalyx with functional target molecules. The focus was on the impact of potential shear stress, that cells experience when they get processed in thermoresponsive bioinks, and a way to increase the cell stiffness via metabolic glycoengineering to attenuate shear forces. For the characterization of the metabolic glycoengineering, four different peracetylated and four non-acetylated modified monosaccharides (two mannose and two sialic acid sugars) were tested in primary human mesenchymal stromal cells (hMSC) and telomerase-immortalized hMSC (hMSC-TERT). Viability results demonstrated a dose-dependent correlation for all sugars, at which hMSC-TERT seemed to be more susceptible leading to lower viability rates. The assessment of the incorporation efficiencies was performed by click chemistry using fluorescent dyes and revealed also a dose-dependent correlation for all mannose and sialic acid sugars, while glucose and galactose variants were not detected in the glycocalyx. However, incorporation efficiencies were highest when using mannose sugars in the primary hMSC. A subsequent analysis of the temporal retention of the incorporated monosaccharides showed a constant declining fluorescence signal up to 6 d for azido mannose in hMSC-TERT, whereas no signal could be detected for alkyne mannose after 2 d. Investigation of the differentiation potential and expression of different target genes revealed no impairment after incubation with mannose sugars, indicating a normal phenotype for hMSC-TERT. Following the successful establishment of the method, either a coumarin derivative or an artificial galectin 1 ligand were incorporated into the cell glycocalyx of hMSC-TERT as functional target molecule. The biophysical analysis via shear flow deformation cytometry revealed a slightly increased cell stiffness and lowered fluidity for both molecules. A further part of this project aimed to control lectin-mediated cell adhesion by artificial galectin 1 ligands. As that hypothesis was settled in the work group of Prof. Dr. Jürgen Seibel, this work supported with an initial characterization of galectin 1 as part of the hMSC biology. A stable galectin 1 expression at gene and protein level in both hMSC and hMSC-TERT could be confirmed, at which immunocytochemical stainings could detect the protein only in the glycocalyx. The treatment of hMSC-TERT with a galectin 1 ligand in different concentrations did not show an altered gene expression of galectin 1. However, these first data in addition to the investigation of stiffness confirmed the applicability of specific and artificial
IV
galectin 1 ligands in biofabrication approaches to alter cell properties of hMSC. To conclude, metabolic glycoengineering has been successfully implemented in hMSC and hMSC-TERT to introduce glycocalyx modifications which reside there for several days. A proof of concept was carried out by the increase of cell stiffness and fluidity by the incorporation of a coumarin derivative or an artificial galectin 1 ligand.
For the characterization of shear stress impact on cells after printing in thermoresponsive bioinks, the processing of hMSC-TERT (mixing or additionally printing) with Pluronic F127 or Polyoxazoline-Polyoxazine (POx-POzi) polymer solution was investigated. While there were no changes in viability when using POx-POzi bioink, processing with Pluronic F127 indicated slightly lower viability and increased apoptosis activity. Assessment of cellular responses to potential shear stress showed no reorganization of the cytoskeleton independent of the bioink, but highly increased expression of the mechanoresponsive proto-oncogene c Fos which was more pronounced when using Pluronic F127 and just mixed with the bioinks. Interestingly, processing of the mechanoresponsive reporter cell line hMSC-TERT-AP1 revealed slightly elevated mechanotransduction activity when using POx-POzi polymer and just mixed with the bioinks as well. In conclusion, hMSC-TERT embedded in thermoresponsive bioinks might shortly experience shear stress during the printing process, but that did not lead to remarkable cell damage likely due to the rheological properties of the bioinks. Furthermore, the printing experiments also suggested that cells do not sense more shear stress when additionally printed.
The superfamily of G protein-coupled receptors (GPCRs) comprises more than 800 members, which are divided into five families based on phylogenetic analyses (GRAFS classification): Glutamate, Rhodopsin, Adhesion, Frizzled/Taste2 and Secretin. The adhesion G protein-coupled receptor (aGPCR) family forms with 33 homologs in Mammalia the second largest and least investigated family of GPCRs. The general architecture of an aGPCR comprises the GPCR characteristics of an extracellular region (ECR), a seven transmembrane (7TM) domain and an intracellular region (ICR). A special feature of aGPCRs is the extraordinary size of the ECR through which they interact with cellular and matricellular ligands via adhesion motif folds. In addition, the ECR contains a so-called GPCR autoproteolysis-inducing (GAIN) domain, which catalyzes autoproteolytic cleavage of the protein during maturation. This cleavage leads to the formation of an N-terminal (NTF) and a C-terminal fragment (CTF), which build a unit by means of hydrophobic interactions and therefore appear as a heterodimeric receptor at the cell surface. In the past, it has been shown that the first few amino acids of the CTF act as a tethered agonist (TA) that mediates the activation of the receptor through the interaction with the 7TM domain. However, the molecular mechanism promoting the TA-7TM domain interaction remains elusive. This work reveals a novel molecular mechanism that does not require the dissociation of the NTF-CTF complex to promote release of the TA and thus activation of the aGPCR. The introduction of bioorthogonal labels into receptorsignaling- relevant regions of the TA of various aGPCRs demonstrated that the TA is freely accessible within the intact GAIN domain. This suggests a structural flexibility of the GAIN domain, which allows a receptor activation independent of the NTF-CTF dissociation, as found in cleavage-deficient aGPCR variants. Furthermore, the present study shows that the cellular localization and the conformation of the 7TM domain depends on the activity state of the aGPCR, which in turn indicates that the TA mediates conformational changes through the interaction with the 7TM domain, which ultimately regulates the receptor activity. In addition, biochemical analyses showed that the GAIN domain-mediated autoproteolysis of the human aGPCR CD97 (ADGRE5/E5) promotes further cleavage events within the receptor. This suggests that aGPCRs undergo cleavage cascades, which are initialized by the autoproteolytic reaction of the GAIN domain. Thus, it can be assumed that aGPCRs are subject to additional proteolytic events. Finally, the constitutive internalization of the NTF and the CTF of E5 was demonstrated by various labeling methods. It was possible to label both fragments independently and to follow their subcellular location in vitro. In summary, these obtained results contribute to a better understanding about the molecular mechanisms of activity and signaling of aGPCRs.
Unter den sechs Arten der Gattung Listeria finden sich nur zwei pathogene Spezies. L. monocytogenes ist pathogen für Mensch und Tier, L. ivanovii nur tierpathogen. Beide Arten besitzen ein Virulenzgencluster, das auch als Pathogenitätsinsel LIPI-1 bezeichnet wird. Pathogenitätsinseln (PAIs) sind bei gram-negativen Bakterien weit verbreitet, wurden bei gram-positiven Pathogenen bisher jedoch nur selten beschrieben. In L. ivanovii wurde nun ein weiterer Virulenz-assoziierter, instabiler Chromosomenabschnitt entdeckt, der in einem Teilbereich Eigenschaften einer Pathogenitätsinsel besitzt. Ausgehend von einem spontanen, aber reproduzierbaren Deletionsereignis eines großen Genomabschnitts, der einige schon bekannte Virulenz-assoziierte Gene umfasst (i-inlE, i-inlF, smcL), wurden in Zusammenarbeit mit den Kooperationspartnern an der "Universidad Complutense de Madrid", insbesondere mit G. Domínguez-Bernal die komplette deletierte Region sowie flankierende Genombereiche genauer analysiert. Im Rahmen dieser Arbeit konnten rechts von dem bereits charakterisierten Gen smcL 13 neue Open Reading Frames (ORFs) bzw. Gene (ydeI, rnaH, norA) von L. ivanovii identifiziert werden, die größtenteils in der Deletionsmutante L. ivanovii GD-3 deletiert waren. Für die meisten Open Reading Frames konnten Homologien zu ORFs in den Genomsequenzen von L. monocytogenes und der apathogenen Art L. innocua gefunden werden. Eigene experimentelle Analysen zeigten zudem, dass diese ORFs in ähnlicher Anordnung auch in den apathogenen Arten L. seeligeri und L. welshimeri vorhanden sind, was wahrscheinlich macht, dass sie nicht an der Virulenz von Listerien beteiligt sind. G. Domínguez-Bernal fand im links von smcL liegenden Bereich eine Reihe neuer Internalingene, die alle spezifisch für L. ivanovii sind. Für die Gene i-inlE, i-inlF und smcL ist bereits bekannt, dass diese Virulenz-assoziiert sind. Dies führte zur Definition einer neuen, LIPI-2 genannten Pathogenitätsinsel in L. ivanovii, die außer smcL und i-inlFE alle neu gefundenen Internalingene umfasst. In dieser Arbeit durchgeführte Untersuchungen der LIPI-2 flankierenden Bereiche zeigten, dass diese in L. monocytogenes und auch den apathogenen Arten L. innocua, L. seeligeri und L. welshimeri bemerkenswert konserviert sind. Durch Transkriptionsuntersuchungen mittels RT-PCR wurde die Expression der neu identifizierten Gene analysiert. Hierbei wurden verschiedene Kulturbedingungen untersucht sowie die Transkription nach Infektion mehrerer Zelllinien bestimmt. Bei der Sequenzanalyse wurde für fast alle Internalingene eine PrfA-Box identifiziert und es bestätigte sich in dieser Arbeit, dass die meisten der Internalingene PrfA-abhängig exprimiert werden. Allerdings wiesen die einzelnen Gene kein einheitliches Transkriptionsprofil unter verschiedenen in vitro-Bedingungen auf. Eine Analyse der Genexpression nach Infektion verschiedener Zelllinien zeigte schließlich, dass die Internalingene während einer Infektion differentiell transkribiert werden und möglicherweise am Infektionsgeschehen beteiligt sind. Das Expressionsmuster der zu LIPI-2 benachbarten Open Reading Frames bestätigte, dass diese Gene PrfA-unabhängig und unter verschiedenen Bedingungen konstitutiv exprimiert werden. Das Expressionsmuster dieser Gene läßt den Schluss zu, dass sie vermutlich nicht zur Virulenz von L. ivanovii beitragen. Die Untersuchung der Virulenzclustergene in LIPI-1 schließlich zeigte eine deutliche PrfA-Abhängigkeit der Genexpression. Es konnte bestätigt werden, dass deren Transkription unter PrfA-induzierenden Bedingungen verstärkt wird. Zudem fand sich auch nach Infektion eine deutliche Expression dieser Gene.
Fremdschämen or Fremdscham, a negative emotion which arises while observing someone behave inappropriately, comes to fame after the turn of the millennium in german speaking countries. There, they name it literally „other‘s shame“ and it becomes obvious that this emotion happens most commonly while watching TV: reality shows, talent shows and bad comedies. The word even makes it to the dictionaries starting 2009, as its use increases unstoppably in everyday language, starting to get used in more and more situations, seemingly as a synonym of embarrassing or shameful. Still, a look in the emotional research on the subject returns exactly zero results as of 2011, leaving open the question as of what this emotion might be, and what it is not. The present wort aims at explaining not only the phenomenon of Fremdschämen, but also the Emotion behind it - Embarrassment -, at a process level.
Infectious diseases caused by pathogenic microorganisms are one of the largest socioeconomic burdens today. Although infectious diseases have been studied for decades, in numerous cases, the precise mechanisms involved in the multifaceted interaction between pathogen and host continue to be elusive. Thus, it still remains a challenge for researchers worldwide to develop novel strategies to investigate the molecular context of infectious diseases in order to devise preventive or at least anti-infective measures. One of the major drawbacks in trying to obtain in-depth knowledge of how bacterial pathogens elicit disease is the lack of suitable infection models to authentically mimic the disease progression in humans. Numerous studies rely on animal models to emulate the complex temporal interactions between host and pathogen occurring in humans. While they have greatly contributed to shed light on these interactions, they require high maintenance costs, are afflicted with ethical drawbacks, and are not always predictive for the infection outcome in human patients. Alternatively, in-vitro two-dimensional (2D) cell culture systems have served for decades as representatives of human host environments to study infectious diseases. These cell line-based models have been essential in uncovering virulence-determining factors of diverse pathogens as well as host defense mechanisms upon infection. However, they lack the morphological and cellular complexity of intact human tissues, limiting the insights than can be gained from studying host-pathogen interactions in these systems.
The focus of this thesis was to establish and innovate intestinal human cell culture models to obtain in-vitro reconstructed three-dimensional (3D) tissue that can faithfully mimic pathogenesis-determining processes of the zoonotic bacterium Campylobacter jejuni (C. jejuni). Generally employed for reconstructive medicine, the field of tissue engineering provides excellent tools to generate organ-specific cell culture models in vitro, realistically recapitulating the distinctive architecture of human tissues. The models employed in this thesis are based on decellularized extracellular matrix (ECM) scaffolds of porcine intestinal origin. Reseeded with intestinal human cells, application of dynamic culture conditions promoted the formation of a highly polarized mucosal epithelium maintained by functional tight and adherens junctions. While most other in-vitro infection systems are limited to a flat monolayer, the tissue models developed in this thesis can display the characteristic 3D villi and crypt structure of human small intestine.
First, experimental conditions were established for infection of a previously developed, statically cultivated intestinal tissue model with C. jejuni. This included successful isolation of bacterial colony forming units (CFUs), measurement of epithelial barrier function, as well as immunohistochemical and histological staining techniques. In this way, it became possible to follow the number of viable bacteria during the infection process as well as their translocation over the polarized epithelium of the tissue model. Upon infection with C. jejuni, disruption of tight and adherens junctions could be observed via confocal microscopy and permeability measurements of the epithelial barrier. Moreover, C. jejuni wildtype-specific colonization and barrier disruption became apparent in addition to niche-dependent bacterial localization within the 3D microarchitecture of the tissue model. Pathogenesis-related phenotypes of C. jejuni mutant strains in the 3D host environment deviated from those obtained with conventional in-vitro 2D monolayers but mimicked observations made in vivo. Furthermore, a genome-wide screen of a C. jejuni mutant library revealed significant differences for bacterial factors required or dispensable for interactions with unpolarized host cells or the highly prismatic epithelium provided by the intestinal tissue model. Elucidating the role of several previously uncharacterized factors specifically important for efficient colonization of a 3D human environment, promises to be an intriguing task for future research.
At the frontline of the defense against invading pathogens is the protective, viscoelastic mucus layer overlying mucosal surfaces along the human gastrointestinal tract (GIT). The development of a mucus-producing 3D tissue model in this thesis was a vital step towards gaining a deeper understanding of the interdependency between bacterial pathogens and host-site specific mucins. The presence of a mucus layer conferred C. jejuni wildtype-specific protection against epithelial barrier disruption by the pathogen and prevented a high bacterial burden during the course of infection. Moreover, results obtained in this thesis provide evidence in vitro that the characteristic corkscrew morphology of C. jejuni indeed grants a distinct advantage in colonizing mucous surfaces.
Overall, the results obtained within this thesis highlight the strength of the tissue models to combine crucial features of native human intestine into accessible in-vitro infection models. Translation of these systems into infection research demonstrated their ability to expose in-vivo like infection outcomes. While displaying complex organotypic architecture and highly prismatic cellular morphology, these tissue models still represent an imperfect reflection of human tissue. Future advancements towards inclusion of human primary and immune cells will strive for even more comprehensive model systems exhibiting intricate multicellular networks of in-vivo tissue. Nevertheless, the work presented in this thesis emphasizes the necessity to investigate host-pathogen interactions in infection models authentically mimicking the natural host environment, as they remain among the most vital parts in understanding and counteracting infectious diseases.
In einem Zeitraum von Oktober 1997 bis Mai 1998 werden an 19 Patienten 22 Untersuchungen der Becken- und Bein-Arterien sowohl in MRA-Technik als auch als i.a. DSA durchgeführt. Hierbei finden im Rahmen der MRA-Untersuchung in allen Fällen die zeitaufgelöste, Kontrastmittel-unterstützte 3d-Flash-Sequenz und die EKG-getriggerte 2d-Flash-Multivenc-Pha-senkontrast-Sequenz Anwendung. Beide Methoden werden in der Diagnostik der pAVK von der Aortenbifurkation bis zum distalen Unterschenkel getestet und in 3 Fällen im Rahmen einer periinterventionellen Kontrolle vor und nach PTA eingesetzt. Das Patientenkollektiv setzt sich ausnahmslos aus Patienten mit pAVK zusammen, die häufig Nebenbefunde wie zum Beispiel einen Diabetes mellitus oder eine Niereninsuffizienz aufweisen. Die Auswertung der Angiographien erfolgt durch die Zuordnung der verschiedenen arte-riellen Abschnitte zu verschiedenen Stenosegraden und dem anschließenden statistischen Ver-gleich der Befunde der MRA und der i.a.DSA. Als Ergebnisse erhalten wir für die Kontrastmittel-unterstützte MRA eine Übereinstim-mungsrate mit der i.a. DSA von 79% sowie eine Sensitivität von 96,7% und eine Spezifität von 97% für die Abbildung hämodynamisch relevanter Stenosen. Die Sensitivität für die Detektion von Verschlüssen beträgt 97,8% und die entsprechende Spezifität 99,2%. Die Phasenkontrast-MRA zeigt im Vergleich mit der i.a.DSA eine schwächere Überein-stimmungsrate von 65,4% sowie eine Sensitivität von 88,3% und eine Spezifität von 85,6% für die Darstellung hämodynamisch relevanter Stenosen. Für die Diagnose eines Gefäßverschlus-ses ist die Sensitivität 89% und die Spezifität 91,8%. Als Schlußfolgerung wird festgestellt, daß die MRA eine nichtinvasive, zur i.a.DSA äqui-valente Untersuchungsmethode darstellt, die bei Kontraindikationen gegen die i.a.DSA einge-setzt werden kann. Im Vergleich zur Phasenkontrast-MRA ist die Kontrastmittel-unterstützte MRA sowohl ein schnelleres als auch ein präziseres Verfahren zur Diagnostik von Gefäßläsio-nen der Becken-Bein-Arterien und bietet den Vorteil der 3-dimensionalen Darstellung. Die Phasenkontrast-MRA ist insbesondere durch die einfache Durchführbarkeit und die fehlende Invasivität ebenfalls als Verfahren zur Diagnostik der peripheren AVK denkbar, jedoch ist zur exakten Stenosegraduierung im Bereich der Läsion eine nachgeschaltete Untersuchung mit weiteren Methoden nötig. Die MRA kann in der postinterventionellen, angiographischen Kontrolle eingesetzt werden. Für die Empfehlung zum routinemäßigen Einsatz in diesem Bereich sind jedoch Studien mit größeren Fallzahlen nötig. In naher Zukunft läßt sich die MRA-Technik durch die Entwicklung von leistungsfähi-geren Gradientenspulensystemen, neuen Prototypen von Oberflächenspulen, intelligenteren Nachverarbeitungs-Algorhytmen und Blutpool-Kontrastmitteln noch weiter optimieren. Die Evolution der MRA-Technik wird ihre Integration in die Routinediagnostik vereinfachen und ihr Indikationsspektrum erweitern.
The interaction between circadian clocks and metabolism is of increasing interest, since clock dysfunction often correlates with metabolic pathologies. Many research articles have been published analysing the impact of factors such as circadian clock, light, feeding time and diet-type on energy homeostasis in various tissues/organs of organisms with most of the findings done in mammals. Little is known about the impact of circadian clock and the above-mentioned factors on circulating lipids, especially the transport form of lipids - diacylglycerol (DG) and membrane lipids such as phosphatidylethanolamine (PE) and phosphatidylcholine (PC) in the Drosophila hemolymph. The fruit fly Drosophila is a prime model organism in circadian, behaviour and metabolism research.
To study the role of circadian clock and behaviour in metabolism, we performed an extensive comparative hemolymph lipid (diacylglycerol: DG, phosphatidylethanolamine: PE, phosphatidylcholine: PC) analysis using ultra performance liquid chromatography coupled to time-of-flight mass spectrometry (UPLC-MS) between wild-type flies (WTCS) and clock disrupted mutants (per01). In addition, clock controlled food intake– feeding behaviour was investigated. Time-dependent variation of transport (DG) and membrane lipids (PE and PC) were not rhythmic in WTCS under constant darkness and in per01 under LD, suggesting an impact of light and clock genes on daily lipid oscillations. Day-time and night-time restriction of food led to comparable lipid profiles, suggesting that lipid oscillations are not exclusively entrained by feeding but rather are endogenously regulated. Ultradian oscillations in lipid levels in WTCS under LD were masked by digested fatty acids since lipid levels peaked more robustly at the beginning and end of light phase when flies were fed a lipid- and protein-free diet. These results suggest that metabolite (DG, PE and PC) oscillation is influenced by complex interactions between nutrient-type, photic conditions, circadian clock and feeding time.
In conclusion, the results of this thesis suggest that circadian clocks determine transport and membrane lipid oscillation in Drosophila hemolymph in complex interactions between nutrient-type, photic conditions and feeding behaviour.