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- Graduate School of Life Sciences (130)
- Theodor-Boveri-Institut für Biowissenschaften (68)
- Institut für Informatik (44)
- Universität - Fakultätsübergreifend (40)
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Schriftenreihe
Sonstige beteiligte Institutionen
- Helmholtz Institute for RNA-based Infection Research (HIRI) (2)
- Klinische Studienzentrale (Universitätsklinikum) (2)
- Naturalis Biodiversity Centre (2)
- Rudolf Virchow Center for Integrative and Translational Bioimaging, University of Würzburg (2)
- Akademie der Wissenschaften und der Literatur, Mainz (1)
- Anthropology Department University of Tennessee, Knoxville (1)
- Bungando Medical Centre, Mwanza, Tanzania (1)
- CHC Würzburg (Comprehensive Hearing Center) (1)
- CIBSS Centre for Integrative Biological Signalling Studies, University of Freiburg (1)
- CUHAS Catholic university of health and allied science, Mwanza, Tanzania (1)
Die Bodenfeuchte stellt eine essenzielle Variable für den Energie-, Feuchte- und Stoffaustausch zwischen Landoberfläche und Atmosphäre dar. Ihre Auswirkungen auf Temperatur und Niederschlag sind vielfältig und komplex. Die in Klimamodellen verwendeten Schemata zur Simulation der Bodenfeuchte, auch bodenhydrologische Schemata genannt, sind aufgrund des Ursprungs der Klimamodelle aus Wettermodellen jedoch häufig sehr stark vereinfacht dargestellt.
Bei Klimamodellen, die Simulationen mit einer groben Auflösung von mehreren Zehner- oder Hunderterkilometern rechnen, können viele Prozesse vernachlässigt werden. Da die Auflösung der Klimamodelle jedoch stetig steigt und mittlerweile beim koordinierten Projekt regionaler Klimamodelle CORDEX-CORE standardmäßig bei 0.22° Kantenlänge liegt, müssen auch höher aufgelöste Daten und mehr Prozesse simuliert werden. Dies gilt erst recht mit Blick auf konvektionsauflösende Simulationen mit wenigen Kilometern Kantenlänge. Mit steigenden Modellauflösungen steigt zugleich die Komplexität und Differenziertheit der Fragestellungen, die mit Hilfe von Klimamodellen beantwortet werden sollen. An diesem Punkt setzt auch das Projekt BigData@Geo an, in dessen Rahmen die vorliegende Arbeit entstand. Ziel dieses Projektes ist es, hochaufgelöste Klimainformationen für den bayerischen Regierungsbezirk Unterfranken für Akteure aus der Land- und Forstwirtschaft sowie dem Weinbau zur Verfügung zu stellen.
Auf diesen angewandten und grundlegenden Anforderungen und Zielsetzungen basierend, bedarf auch das in dieser Arbeit verwendete regionale Klimamodell REMO (Version 2015) der weiteren Entwicklung. So ist das Hauptziel der Arbeit das bestehende einschichtige bodenhydrologische Schema durch ein mehrschichtiges zu ersetzen. Der Vorteil mehrerer simulierter Bodenschichten besteht darin, dass nun die vertikale Bewegung des Wassers in Form von Versickerung und kapillarem Aufstieg simuliert werden kann. Dies geschieht auf der Basis bodenhydrologischer Parameter, deren Wert in Abhängigkeit vom Boden und der Bodenfeuchte über die Wasserrückhaltekurve bestimmt wird. Für diese Kurve existieren verschiedene Parametrisierungen, von denen die Ansätze von Clapp-Hornberger und van Genuchten verwendet wurden. Außerdem kann die Bodenfeuchte nun bis zu einer Tiefe von circa 10 m beziehungsweise der Tiefe des anstehenden Gesteins simuliert werden. Damit besteht im Gegensatz zum vorherigen Schema, dessen Tiefe auf die Wurzeltiefe beschränkt ist, die Möglichkeit, dass Wasser auch unterhalb der Wurzeln zur Verfügung stehen kann und somit die absolute im Boden verfügbare Wassermenge zunimmt. Die Schichtung erlaubt darüber hinaus die Verdunstung aus unbewachsenem Boden lediglich auf Basis des in der obersten Schicht verfügbaren Wassers. Ein weiterer Prozess, der dank der Schichtung und der weiter unten erläuterten Datensätze neu parametrisiert werden kann, ist die Infiltration.
Für die Verwendung des Schemas sind Informationen über bodenhydrologische Parameter, die Wurzeltiefe und die Tiefe bis zum anstehenden Gestein erforderlich. Entsprechende Datensätze müssen hierfür aufbereitet und in das Modell eingebaut werden. Bezüglich der Wurzeltiefe wurden drei sich bezüglich der Tiefe, der Definition und der verfügbaren Auflösung stark voneinander unterscheidende Datensätze verglichen. Letztendlich wird die Wurzeltiefe aus dem mit einer anderen REMO-Version gekoppelten Vegetationsmodul iMOVE verwendet, da zukünftig eine Kopplung dieses Moduls mit dem mehrschichtigen Boden geplant ist und die Wurzeltiefen damit konsistent sind. Zudem ist die zugrundeliegende Auflösung der Daten hoch und es werden maximale Wurzeltiefen berücksichtigt, die besonders wichtig für die Simulation von Landoberfläche-Atmosphäre-Interaktionen sind. Diese Vorteile brachten die anderen Datensätze nicht mit. In der finalen Modellversion werden für die Tiefe bis zum anstehenden Gestein und die Korngrößenverteilungen die Daten von SoilGrids verwendet. Ein Vergleich mit anderen Bodendatensätzen fand in einer parallel laufenden Dissertation statt (Ziegler 2022). Bei SoilGrids ist hervorzuheben, dass die Korngrößenverteilungen in einer hohen räumlichen Auflösung (1 km^2 oder höher) und mit mehreren vertikalen Schichten vorliegen. Gegenüber dem ursprünglich in REMO verwendeten Datensatz mit einer Kantenlänge von 0.5° und ohne vertikale Differenzierung ist dies eine starke Verbesserung der Eingangsdaten. Dazu kommt, dass die Korngrößenverteilungen die Verwendung kontinuierlicher Pedotransferfunktionen statt fünf diskreter Texturklassen, denen für die bodenhydrologischen Parameter fixe Tabellenwerte zugewiesen werden, ermöglichen. Dies führt zu einer deutlich besseren Differenzierung des heterogenen Bodens.
Im Rahmen der Arbeit wurden insgesamt 19 Simulationen für Europa und ein erweitertes Deutschlandgebiet mit Auflösungen von 0.44° beziehungsweise 0.11° für den Zeitraum 2000 bis 2018 gerechnet. Dabei zeigte sich, dass die Einführung des mehrschichtigen Bodenschemas gegenüber dem einschichtigen Schema zu einer Verringerung der Bodenfeuchte in der Wurzeltiefe führt. Nichtsdestotrotz nimmt die absolute Wassermenge des Bodens durch die Berücksichtigung des Bodens unterhalb der Wurzelzone zu. Bezogen auf die einzelnen Schichten wird die Bodenfeuchte damit zwar unterschätzt, im Laufe der Modellentwicklung kann jedoch eine Verbesserung im Vergleich zu ERA5 erzielt werden. Das neue Schema führt zu einer Verringerung der Evapotranspiration, die über alle Schritte der Modellentwicklung und besonders während der Sommermonate auftritt. Im Vergleich zu Validationsdaten von ERA5 und GLEAM zeigt sich, dass dies eine Verbesserung dieser Größe bedeutet, die sowohl in der Fläche als auch beim Fehler und in der Verteilung auftritt.
Gleiches lässt sich für den Oberflächenabfluss sagen. Hierfür implementierte Schemata (Philip, Green-Ampt), die anders als das standardmäßig verwendete Improved-Arno-Schema bodenhydrologische Parameter berücksichtigen, konnten eine weitere Verbesserung im Flachland zeigen. In Gebirgsregionen nahm der Fehler durch die nicht enthaltene Berücksichtigung der Hangneigung jedoch zu, sodass in der finalen Modellversion auf das Improved-Arno-Schema zurückgegriffen wurde. Die Temperatur steigt durch die ursprüngliche Version des mehrschichtigen Schemas zunächst an, was zu einer Über- statt der vorherigen Unterschätzung gegenüber E-OBS führt. Die Modellentwicklung resultiert zwar in einer Reduzierung der Temperatur, jedoch fällt diese zu stark aus, sodass der Temperaturfehler letztendlich größer als in der einschichtigen Modellversion ist. Da die Evapotranspiration jedoch maßgeblich verbessert wurde, kann dieser Fehler eventuell auf ein übermäßiges Tuning der Temperatur zurückgeführt werden.
Die Betrachtung von Hitzeereignissen am Beispiel der Sommer 2003 und 2018 hat gezeigt, dass die Modellentwicklung dazu beiträgt, diese Ereignisse besser als das einschichtige Schema zu simulieren. Zwar trifft dies nicht auf das räumliche Verhalten der mittleren Temperatur zu, jedoch auf deren zeitlichen Verlauf. Hinzu kommt die bessere Simulation der täglichen Extrem- und besonders der Minimaltemperatur, was zu einer Erhöhung der täglichen Temperaturspanne führt. Diese wird von Klimamodellen in der Regel zu stark unterschätzt.
Durch die Berücksichtigung der vertikalen Wasserflüsse hat sich jedoch auch gezeigt, dass noch enormes Entwicklungspotenzial mit Blick auf (boden)hydrologische Prozesse besteht. Dies gilt in besonderem Maße für zukünftige Simulationen mit konvektionserlaubender Auflösung. So sollten subskalige Informationen des Bodens und der Orographie berücksichtigt werden. Dies dient einerseits der Repräsentation vorliegender Heterogenitäten und kann andererseits, wie am Beispiel der Infiltrationsschemata dargelegt, zur Verbesserung bestehender Prozesse beitragen. Da die simulierte Drainage durch das mehrschichtige Bodenschema im gleichen Maße zu- wie der Oberflächenabfluss abnimmt und das Wasser dem Modell in der Folge nicht weiter zur Verfügung steht, sollte zukünftig auch Grundwasser im Modell berücksichtigt werden. Eine Vielzahl von Studien konnte einen Mehrwert durch die Implementierung dieser Variable und damit verbundener Prozesse feststellen. Mittelfristig ist jedoch insgesamt die Kopplung an ein hydrologisches Modell zu empfehlen, um die bei hochauflösenden Simulationen relevanten Prozesse angemessen repräsentieren zu können. Hierfür bieten sich beispielsweise ParFlow oder mHM an.
Insgesamt ist festzuhalten, dass das mehrschichtige Bodenschema einen Mehrwert liefert, da schwer zu simulierende und in der Postprozessierung zu korrigierende Variablen wie die Evapotranspiration und der Oberflächenabfluss deutlich besser modelliert werden können als mit dem einschichtigen Schema. Dies gilt auch für die Extremtemperaturen. Beides ist klar auf die Schichtung des Bodens und damit einhergehender Prozesse zurückzuführen. Bezüglich der Daten zeigt sich, dass die Wurzeltiefe, die Berücksichtigung von SoilGrids und die vertikale Bodeninformation für die weitere Optimierung verantwortlich sind. Darüber hinaus ist der höhere Informationsgehalt, der anhand der geschichteten Bodenfeuchte zur Verfügung steht, ebenfalls als Mehrwert einzustufen.
Given the growing interest of corporate stakeholders in Metaverse applications, there is a need to understand accessibility of these technologies for marginalized populations such as people living with dementia to ensure inclusive design of Metaverse applications. We assessed the accessibility of extended reality technology for people living with mild cognitive impairment and dementia to develop accessibility guidelines for these technologies. We used four strategies to synthesize evidence for barriers and facilitators of accessibility: (1) Findings from a non-systematic literature review, (2) guidelines from well-researched technology, (3) exploration of selected mixed reality technologies, and (4) observations from four sessions and video data of people living with dementia using mixed reality technologies. We utilized template analysis to develop codes and themes towards accessibility guidelines. Future work can validate our preliminary findings by applying them on video recordings or testing them in experiments.
In dieser Dissertation wird beschrieben, wie es durch systematische Anwendung unterschiedlicher Methoden zur Herstellung und Modifizierung von Diamant gezielt und verlässlich möglich ist, die Eigenschaften von Diamanten zu beeinflussen. Es wird gezeigt, wie durch Variation der Parameter bei dem Wachstum von Diamant Einfluss auf dessen Morphologie und Eigenschaften genommen werden kann. Des Weiteren wird ein Verfahren vorgestellt, mit dem die Oberfläche des Diamanten durch Ozon effizient oxidiert beziehungsweise reduziert werden kann. Um diese veränderte Oberflächenbelegung möglichst genau zu analysieren, wird im letzten Teil der Dissertation eine Methode zur qualitativen und quantitativen Analytik der Oberflächen von Kohlenstoffnanomaterialien beschrieben.
Insights;
(2023)
The cluster of texts assembled here were imagined, crafted, and brought together as a collaborative writing project that emerged from the seminar titled "Words Matter Worlds: Activist Scholarship and Literary Praxis," which convened over the course of the 2021/22 winter semester as an offering of the American Studies department of the Julius-Maximilians-Universität Würzburg. Like the seminar that nurtured the considerations that evolve here, these contributions engage with how scholarly writing practices in general, and literary and cultural studies in particular, can remake the world.
Platelets play an important role in the body, since they are part of the hemostasis
system, preventing and stopping blood loss. Nevertheless, when platelet or
coagulation system function are impaired, uncontrolled bleedings but also irreversible
vessel occlusion followed by ischemic tissue damage can occur. Therefore,
understanding platelet function and activation, mechanisms which are controlled by a
variety of platelet membrane receptors and other factors is important to advance out
knowledge of hemostasis and platelet malfunction. For a complete picture of platelet
function and their modulating behavior it is desired to be able to quantify receptor
distributions and interactions of these densely packed molecular ensembles in the
membrane. This challenges scientists for several reasons. Most importantly, platelets
are microscopically small objects, challenging the spatial resolution of conventional
light microscopy. Moreover, platelet receptors are highly abundant on the membrane
so even super-resolution microscopy struggles with quantitative receptor imaging on
platelets.
With Expansion microscopy (ExM), a new super-resolution technique was introduced,
allowing resolutions to achieve super-resolution without using a super-resolution
microscope, but by combining a conventional confocal microscopy with a highly
processed sample that has been expanded physically. In this doctoral thesis, I
evaluated the potential of this technique for super-resolution platelet imaging by
optimizing the sample preparation process and establishing an imaging and image
processing pipeline for dual-color 3D images of different membrane receptors. The
analysis of receptor colocalization using ExM demonstrated a clear superiority
compared to conventional microscopy. Furthermore, I identified a library of
fluorescently labeled antibodies against different platelet receptors compatible with
ExM and showed the possibility of staining membrane receptors and parts of the
cytoskeleton at the same time.
In the recent years, translational studies comparing imaging data of animals and humans have gained increasing
scientific interests with crucial findings stemming from both, human and animal work. In order to harmonize
statistical analyses of data from different species and to optimize the transfer of knowledge between them, shared
data acquisition protocols and combined statistical approaches have to be identified. Following this idea, methods
of data analysis, which have until now mainly been used to model neural responses of electrophysiological
recordings from rodent data, were applied on human hemodynamic responses (i.e. Blood-Oxygen-Level-
Dependent BOLD signal) as measured via functional magnetic resonance imaging (fMRI).
At the example of two attention and impulsivity networks, timing dynamics and amplitude of the fMRI signal were
determined (study 1). Study 2 described the same parameters frequency-specifically, and in study 3, the
complexity of neural processing was quantified in terms of fractality. Determined parameters were compared with
regard to the subjects’ task performance / impulsivity to validate findings with regard to reports of the current
scientific debate.
In a general discussion, overlapping as well as additional information of methodological approaches were
discussed with regard to its potential for biomarkers in the context of neuropsychiatric disorders.
In dieser Arbeit wird die intraoperative Boost-Bestrahlung mit 9 oder 20 Gy bei Mammakarzinompatientinnen evaluiert. Es werden das onkologische Ergebnis, die bestrahlungsassoziierte Toxizität, das kosmetische Therapieergebnis und die Lebensqualität ausgewertet. Die Analyse bezieht sich auf 124 Fälle im frühen Brustkrebsstadium.
We propose that false beliefs about own current economic status are an important factor for explaining populist attitudes. Eliciting subjects’ receptiveness to rightwing populism and their perceived relative income positions in a representative survey of German households, we find that people with pessimistic beliefs about their income position are more attuned to populist statements. Key to understanding the misperception-populism relationship are strong gender differences in the mechanism: men are much more likely to channel their discontent into affection for populist ideas. A simple information provision does neither sustainably reduce misperception nor curb populism.
Background and Objectives: Chronic painful midportion Achilles combined with plantaris tendinopathy can be a troublesome condition to treat. The objective was to prospectively follow patients subjected to ultrasound (US)- and color doppler (CD)-guided wide awake, local anesthetic, no-tourniquet (WALANT) surgery in a private setting. Material and Methods: Twenty-six Swedish patients (17 men and 9 women, mean age 50 years (range 29–62)) and eight international male patients (mean age of 38 years (range 25–71)) with combined midportion Achilles and plantaris tendinopathy in 45 tendons altogether were included. All patients had had >6 months of pain and had tried non-surgical treatment with eccentric training, without effect. US + CD-guided surgical scraping of the ventral Achilles tendon and plantaris removal under local anesthesia was performed on all patients. A 4–6-week rehabilitation protocol with an immediate full-weight-bearing tendon loading regime was used. The VISA-A score and a study-specific questionnaire evaluating physical activity level and subjective satisfaction with the treatment were used for evaluation. Results: At the 1-year follow-up, 32/34 patients (43 tendons) were satisfied with the treatment result and had returned to their pre-injury Achilles tendon loading activity. There were two dropouts (two tendons). For the Swedish patients, the mean VISA-A score increased from 34 (0–64) before surgery to 93 (61–100) after surgery (p < 0.001). There were two complications, one wound rupture and one superficial skin infection. Conclusions: For patients suffering from painful midportion Achilles tendinopathy and plantaris tendinopathy, US + CD-guided surgical Achilles tendon scraping and plantaris tendon removal showed a high satisfaction rate and good functional results 1 year after surgery.
“In Other News”: China’s International Media Strategy on Xinjiang — CGTN and New China TV on YouTube
(2023)
In the Western world China stands accused of severe human rights violations regarding its treatment of the Uyghurs and other predominantly Muslim minorities in its northwestern Xinjiang Uyghur Autonomous Region. This is the first article to systematically analyze the response of China’s international state media to these allegations. By studying the YouTube channels of two leading Chinese state media, China Global Television Network (CGTN) and New China TV (operated by Xinhua News Agency), it presents an indepth understanding of how China’s foreign-facing propaganda works in a crucial case. The quantitative content analysis highlights how China reacted to increasing international (mostly United States) pressure regarding its Xinjiang policies by producing higher volumes of videos and putting out new counternarratives. The qualitative analysis that follows provides in-depth treatment of the most important discourses that Chinese media engage in to salvage the nation’s international image, namely those on development, culture, nature, and terrorism. It finds several ways of countering criticism, ranging from presenting a positive image of China, in line with traditional propaganda guidelines and President Xi Jinping’s assignment to state media to “tell the China story well,” to more innovative approaches. Thus the development narrative becomes more personalized, the discourse on culture supports the “heritagization process” to incorporate minority cultures into a harmonized “Chinese civilization,” representations of nature firmly tie Xinjiang into the discourse of “beautiful China,” the “terror narrative” strategically employs shocking footage in an attempt to gain international “discourse power,” etc. The article provides an up-to-date picture of China’s state media strategy on a highly contentious international issue.
Background: Large Cell Neuroendocrine Carcinoma (LCNEC) is a rare subtype of lung cancer with poor clinical outcomes. Data on recurrence-free survival (RFS) in early and locally advanced pure LCNEC after complete resection (R0) are lacking. This study aims to evaluate clinical outcomes in this subgroup of patients and to identify potential prognostic markers. Methods: Retrospective multicenter study including patients with pure LCNEC stage I-III and R0 resection. Clinicopathological characteristics, RFS, and disease-specific survival (DSS) were evaluated. Univariate and multivariate analyses were performed. Results: 39 patients (M:F = 26:13), with a median age of 64 years (44–83), were included. Lobectomy (69.2%), bilobectomy (5.1%), pneumonectomy (18%), and wedge resection (7.7%) were performed mostly associated with lymphadenectomy. Adjuvant therapy included platinum-based chemotherapy and/or radiotherapy in 58.9% of cases. After a median follow-up of 44 (4–169) months, the median RFS was 39 months with 1-, 2- and 5-year RFS rates of 60.0%, 54.6%, and 44.9%, respectively. Median DSS was 72 months with a 1-, 2- and 5-year rate of 86.8, 75.9, and 57.4%, respectively. At multivariate analysis, age (cut-off 65 years old) and pN status were independent prognostic factors for both RFS (HR = 4.19, 95%CI = 1.46–12.07, p = 0.008 and HR = 13.56, 95%CI 2.45–74.89, p = 0.003, respectively) and DSS (HR = 9.30, 95%CI 2.23–38.83, p = 0.002 and HR = 11.88, 95%CI 2.28–61.84, p = 0.003, respectively). Conclusion: After R0 resection of LCNEC, half of the patients recurred mostly within the first two years of follow-up. Age and lymph node metastasis could help to stratify patients for adjuvant therapy.
This work developed during the first funding period of the subproject B05 in the framework of the interdisciplinary research consortium TRR 225 ‘From the Fundamentals of Biofabrication toward functional Tissue Models’ and was part of a cooperation between the Orthopedic Department represented by Prof. Dr. Regina Ebert and the Institute of Organic Chemistry represented by Prof. Dr. Jürgen Seibel.
This project dealed with cellular behavior during the bioprinting process and how to influence it by modifying the cell glycocalyx with functional target molecules. The focus was on the impact of potential shear stress, that cells experience when they get processed in thermoresponsive bioinks, and a way to increase the cell stiffness via metabolic glycoengineering to attenuate shear forces. For the characterization of the metabolic glycoengineering, four different peracetylated and four non-acetylated modified monosaccharides (two mannose and two sialic acid sugars) were tested in primary human mesenchymal stromal cells (hMSC) and telomerase-immortalized hMSC (hMSC-TERT). Viability results demonstrated a dose-dependent correlation for all sugars, at which hMSC-TERT seemed to be more susceptible leading to lower viability rates. The assessment of the incorporation efficiencies was performed by click chemistry using fluorescent dyes and revealed also a dose-dependent correlation for all mannose and sialic acid sugars, while glucose and galactose variants were not detected in the glycocalyx. However, incorporation efficiencies were highest when using mannose sugars in the primary hMSC. A subsequent analysis of the temporal retention of the incorporated monosaccharides showed a constant declining fluorescence signal up to 6 d for azido mannose in hMSC-TERT, whereas no signal could be detected for alkyne mannose after 2 d. Investigation of the differentiation potential and expression of different target genes revealed no impairment after incubation with mannose sugars, indicating a normal phenotype for hMSC-TERT. Following the successful establishment of the method, either a coumarin derivative or an artificial galectin 1 ligand were incorporated into the cell glycocalyx of hMSC-TERT as functional target molecule. The biophysical analysis via shear flow deformation cytometry revealed a slightly increased cell stiffness and lowered fluidity for both molecules. A further part of this project aimed to control lectin-mediated cell adhesion by artificial galectin 1 ligands. As that hypothesis was settled in the work group of Prof. Dr. Jürgen Seibel, this work supported with an initial characterization of galectin 1 as part of the hMSC biology. A stable galectin 1 expression at gene and protein level in both hMSC and hMSC-TERT could be confirmed, at which immunocytochemical stainings could detect the protein only in the glycocalyx. The treatment of hMSC-TERT with a galectin 1 ligand in different concentrations did not show an altered gene expression of galectin 1. However, these first data in addition to the investigation of stiffness confirmed the applicability of specific and artificial
IV
galectin 1 ligands in biofabrication approaches to alter cell properties of hMSC. To conclude, metabolic glycoengineering has been successfully implemented in hMSC and hMSC-TERT to introduce glycocalyx modifications which reside there for several days. A proof of concept was carried out by the increase of cell stiffness and fluidity by the incorporation of a coumarin derivative or an artificial galectin 1 ligand.
For the characterization of shear stress impact on cells after printing in thermoresponsive bioinks, the processing of hMSC-TERT (mixing or additionally printing) with Pluronic F127 or Polyoxazoline-Polyoxazine (POx-POzi) polymer solution was investigated. While there were no changes in viability when using POx-POzi bioink, processing with Pluronic F127 indicated slightly lower viability and increased apoptosis activity. Assessment of cellular responses to potential shear stress showed no reorganization of the cytoskeleton independent of the bioink, but highly increased expression of the mechanoresponsive proto-oncogene c Fos which was more pronounced when using Pluronic F127 and just mixed with the bioinks. Interestingly, processing of the mechanoresponsive reporter cell line hMSC-TERT-AP1 revealed slightly elevated mechanotransduction activity when using POx-POzi polymer and just mixed with the bioinks as well. In conclusion, hMSC-TERT embedded in thermoresponsive bioinks might shortly experience shear stress during the printing process, but that did not lead to remarkable cell damage likely due to the rheological properties of the bioinks. Furthermore, the printing experiments also suggested that cells do not sense more shear stress when additionally printed.
Infectious diseases caused by pathogenic microorganisms are one of the largest socioeconomic burdens today. Although infectious diseases have been studied for decades, in numerous cases, the precise mechanisms involved in the multifaceted interaction between pathogen and host continue to be elusive. Thus, it still remains a challenge for researchers worldwide to develop novel strategies to investigate the molecular context of infectious diseases in order to devise preventive or at least anti-infective measures. One of the major drawbacks in trying to obtain in-depth knowledge of how bacterial pathogens elicit disease is the lack of suitable infection models to authentically mimic the disease progression in humans. Numerous studies rely on animal models to emulate the complex temporal interactions between host and pathogen occurring in humans. While they have greatly contributed to shed light on these interactions, they require high maintenance costs, are afflicted with ethical drawbacks, and are not always predictive for the infection outcome in human patients. Alternatively, in-vitro two-dimensional (2D) cell culture systems have served for decades as representatives of human host environments to study infectious diseases. These cell line-based models have been essential in uncovering virulence-determining factors of diverse pathogens as well as host defense mechanisms upon infection. However, they lack the morphological and cellular complexity of intact human tissues, limiting the insights than can be gained from studying host-pathogen interactions in these systems.
The focus of this thesis was to establish and innovate intestinal human cell culture models to obtain in-vitro reconstructed three-dimensional (3D) tissue that can faithfully mimic pathogenesis-determining processes of the zoonotic bacterium Campylobacter jejuni (C. jejuni). Generally employed for reconstructive medicine, the field of tissue engineering provides excellent tools to generate organ-specific cell culture models in vitro, realistically recapitulating the distinctive architecture of human tissues. The models employed in this thesis are based on decellularized extracellular matrix (ECM) scaffolds of porcine intestinal origin. Reseeded with intestinal human cells, application of dynamic culture conditions promoted the formation of a highly polarized mucosal epithelium maintained by functional tight and adherens junctions. While most other in-vitro infection systems are limited to a flat monolayer, the tissue models developed in this thesis can display the characteristic 3D villi and crypt structure of human small intestine.
First, experimental conditions were established for infection of a previously developed, statically cultivated intestinal tissue model with C. jejuni. This included successful isolation of bacterial colony forming units (CFUs), measurement of epithelial barrier function, as well as immunohistochemical and histological staining techniques. In this way, it became possible to follow the number of viable bacteria during the infection process as well as their translocation over the polarized epithelium of the tissue model. Upon infection with C. jejuni, disruption of tight and adherens junctions could be observed via confocal microscopy and permeability measurements of the epithelial barrier. Moreover, C. jejuni wildtype-specific colonization and barrier disruption became apparent in addition to niche-dependent bacterial localization within the 3D microarchitecture of the tissue model. Pathogenesis-related phenotypes of C. jejuni mutant strains in the 3D host environment deviated from those obtained with conventional in-vitro 2D monolayers but mimicked observations made in vivo. Furthermore, a genome-wide screen of a C. jejuni mutant library revealed significant differences for bacterial factors required or dispensable for interactions with unpolarized host cells or the highly prismatic epithelium provided by the intestinal tissue model. Elucidating the role of several previously uncharacterized factors specifically important for efficient colonization of a 3D human environment, promises to be an intriguing task for future research.
At the frontline of the defense against invading pathogens is the protective, viscoelastic mucus layer overlying mucosal surfaces along the human gastrointestinal tract (GIT). The development of a mucus-producing 3D tissue model in this thesis was a vital step towards gaining a deeper understanding of the interdependency between bacterial pathogens and host-site specific mucins. The presence of a mucus layer conferred C. jejuni wildtype-specific protection against epithelial barrier disruption by the pathogen and prevented a high bacterial burden during the course of infection. Moreover, results obtained in this thesis provide evidence in vitro that the characteristic corkscrew morphology of C. jejuni indeed grants a distinct advantage in colonizing mucous surfaces.
Overall, the results obtained within this thesis highlight the strength of the tissue models to combine crucial features of native human intestine into accessible in-vitro infection models. Translation of these systems into infection research demonstrated their ability to expose in-vivo like infection outcomes. While displaying complex organotypic architecture and highly prismatic cellular morphology, these tissue models still represent an imperfect reflection of human tissue. Future advancements towards inclusion of human primary and immune cells will strive for even more comprehensive model systems exhibiting intricate multicellular networks of in-vivo tissue. Nevertheless, the work presented in this thesis emphasizes the necessity to investigate host-pathogen interactions in infection models authentically mimicking the natural host environment, as they remain among the most vital parts in understanding and counteracting infectious diseases.
Modern lifestyle is often at odds with endogenously driven rhythmicity, which can lead to circadian disruption and metabolic syndrome. One signature for circadian disruption is a reduced or altered metabolite cycling in the circulating tissue reflecting the current metabolic status. Drosophila is a well-established model in chronobiology, but day-time dependent variations of transport metabolites in the fly circulation are poorly characterized. Here, we sampled fly hemolymph throughout the day and analyzed diacylglycerols (DGs), phosphoethanolamines (PEs) and phosphocholines (PCs) using LC-MS. In wild-type flies kept on sugar-only medium under a light-dark cycle, all transport lipid species showed a synchronized bimodal oscillation pattern with maxima at the beginning and end of the light phase which were impaired in period01 clock mutants. In wild-type flies under constant dark conditions, the oscillation became monophasic with a maximum in the middle of the subjective day. In strong support of clock-driven oscillations, levels of the targeted lipids peaked once in the middle of the light phase under time-restricted feeding independent of the time of food intake. When wild-type flies were reared on full standard medium, the rhythmic alterations of hemolymph lipid levels were greatly attenuated. Our data suggest that the circadian clock aligns daily oscillations of DGs, PEs, and PCs in the hemolymph to the anabolic siesta phase, with a strong influence of light on phase and modality.
The presented thesis deals with the investigation of the characteristic physical properties of lead-free double perovskites. For this purpose lead-free double perovskite single crystals were grown from solution. In order to assess the influence of growth temperature on tail states in the material, the crystals were studied using Photoluminescence Excitation (PLE) and Transmission measurements. Additionally, lead-free double perovskite solar cells and thin films were investigated to address the correlation of precursor stoichiometry and solar cell efficiency. In a last step a new earth abundant lead-free double perovskite was introduced and its physical properties were studied by photoluminescene and absorptance. Like this it was possible to assess the suitability of this material for solar cell applications in the future.
The present cumulative dissertation summarizes three clinical studies, which examine
subgroups of patients within the fibromyalgia syndrome (FMS). FMS entails chronic pain and
associated symptoms, and its pathophysiology is incompletely understood (1). Previous studies
show that there is a subgroup of patients with FMS with objective histological pathology of the
small nerve fibers of the peripheral nervous system (PNS). Another subgroup of FMS patients
does not show any signs of pathological changes of the small nerve fibers. The aim of this
dissertation was to compare FMS patients with healthy controls, and these two FMS subgroups
for differences in the central nervous system (CNS) in order to explore possible interactions
between PNS and the CNS. Regarding the CNS, differences of FMS patients with healthy
controls have already been found in studies with small sample sizes, but no subgroups have yet
been identified. Another aim of this thesis was to test whether the subgroups show a different
response to different classes of pain medication. The methods used in this thesis are structural
and functional magnetic resonance imaging (MRI), magnetic resonance diffusion imaging and
magnetic resonance spectroscopy. For the evaluation of clinical symptoms, we used
standardized questionnaires. The subgroups with and without pathologies of the PNS were
determined by skin biopsies of the right thigh and lower leg based on the intraepidermal nerve
fiber density (IENFD) of the small nerve fibers.
1) In the first MRI study, 43 female patients with the diagnosis of FMS and 40 healthy
control subjects, matched in age and body mass index, were examined with different MRI
sequences. Cortical thickness was investigated by structural T1 imaging, white matter integrity
by diffusion tensor imaging and functional connectivity within neuronal networks by functional
resting state MRI. Compared to the controls, FMS patients had a lower cortical volume in
bilateral frontotemporoparietal regions and the left insula, but a higher cortical volume in the
left pericalcarine cortex. Compared to the subgroup without PNS pathology, the subgroup with
PNS pathology had lower cortical volume in both pericalcarine cortices. Diffusion tensor
imaging revealed an increased fractional anisotropy (FA) of FMS patients in corticospinal
pathways such as the corona radiata, but also in regions of the limbic systems such as the fornix
and cingulum. Subgroup comparison again revealed lower mean FA values of the posterior
thalamic radiation and the posterior limb of the left internal capsule in the subgroup with PNS
pathology. In the functional connectivity analysis FMS patients, compared to controls, showed
a hypoconnectivity between the right median frontal gyrus and the posterior cerebellum and
the right crus cerebellum, respectively. In the subgroup comparisons, the subgroup with PNS
pathology showed a hyperconnectivity between both inferior frontal gyri, the right posterior
parietal cortex and the right angular gyrus. In summary, these results show that differences in
brain morphology and functional connectivity exist between FMS patients with and without
PNS pathology. These differences were not associated with symptom duration or severity and,
in some cases, have not yet been described in the context of FMS. The differences in brain
morphology and connectivity between subgroups could also lead to a differential response to
treatment with centrally acting drugs. Further imaging studies with FMS patients should take
into account this heterogeneity of FMS patient cohorts.
2) Following the results from the first MRI study, drug therapies of FMS patients and
their treatment response were compared between PNS subgroups. As there is no licensed drug
for FMS in Europe, the German S3 guideline recommends amitriptyline, duloxetine and
pregabalin for temporary use. In order to examine the current drug use in FMS patients in
Germany on a cross-sectional basis, 156 patients with FMS were systematically interviewed.
The drugs most frequently used to treat pain in FMS were non-steroidal anti-inflammatory
drugs (NSAIDs) (28.9%), metamizole (15.4%) and amitriptyline (8.8%). Pain relief assessed by
patients on a numerical rating scale from 0-10 averaged 2.2 points for NSAIDs, 2.0 for
metamizole and 1.5 for amitriptyline. Drugs that were discontinued for lack of efficacy and not
for side effects were acetaminophen (100%), flupirtine (91.7%), selective serotonin reuptake
inhibitors (81.8%), NSAIDs (83.7%) and weak opioids (74.1%). Patients were divided into
subgroups with and without PNS pathology as determined by skin biopsies. We found no
differences in drug use and effect between the subgroups. Taken together, these results show
that many FMS patients take medication that is not in accordance with the guidelines. The
reduction of symptoms was best achieved with metamizole and NSAIDs. Further longitudinal
studies on medication in FMS are necessary to obtain clearer treatment recommendations.
3) Derived from previous pharmacological and imaging studies (with smaller case
numbers), there is a hypothesis in the FMS literature that hyperreactivity of the insular cortex
may have an impact on FMS. The hyperreactivity seems to be due to an increased concentration
of the excitatory neurotransmitter glutamate in the insular cortex of FMS patients. The
hypothesis is supported by magnetic resonance spectroscopy studies with small number of
cases, as well as results from pharmacological studies with glutamate-inhibiting medication.
Studies from animal models have also shown that an artificially induced increase in glutamate
in the insular cortex can lead to reduced skin innervation. Therefore, the aim of this study was
to compare glutamate and GABA concentrations in the insular cortex of FMS patients with
those of healthy controls using magnetic resonance imaging. There was no significant
difference of both neurotransmitters between the groups. In addition, there was no correlation
between the neurotransmitter concentrations and the severity of clinical symptoms. There
were also no differences in neurotransmitter concentrations between the subgroups with and
without PNS pathology. In conclusion, our study could not show any evidence of a correlation
of glutamate and GABA concentrations with the symptoms of FMS or the pathogenesis of
subgroups with PNS pathologies.
Copy number variations (CNVs) of the KITLG gene seem to be involved in the oncogenesis of digital squamous cell carcinoma (dSCC). The aims of this study were (1) to investigate KITLG CNV in giant (GS), standard (SS), and miniature (MS) schnauzers and (2) to compare KITLG CNV between black GS with and without dSCC. Blood samples from black GS (22 with and 17 without dSCC), black SS (18 with and 4 without dSSC; 5 unknown), and 50 MS (unknown dSSC status and coat colour) were analysed by digital droplet PCR. The results are that (1) most dogs had a copy number (CN) value > 4 (range 2.5–7.6) with no significant differences between GS, SS, and MS, and (2) the CN value in black GS with dSCC was significantly higher than in those without dSCC (p = 0.02). CN values > 5.8 indicate a significantly increased risk for dSCC, while CN values < 4.7 suggest a reduced risk for dSCC (grey area: 4.7–5.8). Diagnostic testing for KITLG CNV may sensitise owners to the individual risk of their black GS for dSCC. Further studies should investigate the relevance of KITLG CNV in SS and the protective effects in MS, who rarely suffer from dSCC.
Patienten mit NNI haben ein erhöhtes Risiko potenziell lebensbedrohliche NN- Krisen zu erleiden. Zur Verbesserung der Präventionsmaßnahmen untersuchte unsere Studie das pharmakokinetische Profil kommerziell verfügbarer Prednison- Suppositorien nach vaginaler und rektaler Applikation in weiblichen Patienten mit primärer NNI. Zwischen der rektalen und vaginalen Gabe von 100 mg Prednison ließ sich keine Bioäquivalenz nachweisen. Die AUC0-360 und die maximalen Prednisolon-Spiegel im Serum waren nach vaginaler Gabe signifikant niedriger. In fünf Patientinnen war kein Wirkstoffspiegel innerhalb von sechs Stunden nachweisbar. Darüber hinaus war der Abfall der ACTH-Spiegel, als indirekter Wirknachweis, nach vaginaler Gabe signifikant geringer. UEs traten nach vaginaler Gabe gehäuft auf und waren vor allem auf verminderte Resorption und damit einhergehendem Mangel an Glukokortikoiden zurückzuführen. Aufgrund der in dieser Studie erhobenen Daten wird eine vaginale Gabe von Rectodelt® zur Prävention und Therapie von NN-Krisen nicht empfohlen. Erklärungsansätze für diese verminderte Resorption nach vaginaler Gabe könnten das Fehlen eines vaginalen Verschlussmuskels, aber auch die galenische Formulierung mit einem hohen Hartfettanteil des Suppositoriums sein. Da nach vaginaler Verabreichung von diversen Medikamenten, z.B. Misoprostol, relevante Arzneimittelspiegel erzielt worden sind, ist eine Resorption über vaginales Epithel nicht generell ausgeschlossen.
Nach rektaler Gabe von Prednison konnten relevante Wirkspiegel erzielt werden. In einer Subanalyse wurden die ACTH-Spiegel nach Gabe von 100 mg Prednison-Suppositorien mit jenen nach Injektion von 100 mg Hydrokortison verglichen. Der minimale ACTH-Spiegel war nach rektaler Applikation jedoch deutlich höher als nach s. c. oder i. m. Injektion von Hydrokortison. Diese Ergebnisse korrelieren auch mit den gemessenen Prednisolon-Spiegeln nach rektaler Gabe. Die höhere glukokortikoide Potenz von Prednison wiegt nicht die langsamere Kinetik nach rektaler Applikation auf. Ferner besitzt Prednison eine niedrigere mineralkortikoide Potenz als Hydrokortison, was einen weiteren Nachteil darstellen könnte, da die Aktivierung des Mineralkortikoid-Rezeptors im Falle einer NN-Krisen-assoziierten Hypotension als wichtig erachtet wird.
Anhand der erhobenen Daten scheint die Injektion (i. m. oder s. c.) von Hydrokortison zur Prävention von NN-Krisen der rektalen Verabreichung von Prednison-Suppositorien deutlich überlegen. Prednison wird zunächst durch die 11ß-Hydroxysterid-Dehydrogenase Typ 1 in Prednisolon umgewandelt. Es wird vermutet, dass glukokortikoide Effekte nach Verabreichung eines Prednisolon- Suppositoriums schneller eintreten bzw. ACTH-Spiegel schneller supprimiert werden. Dies muss in weiteren Studien näher erörtert werden. Ebenso ist denkbar, dass eine höhere Prednison-Dosis bei Suppositorien-Gebrauch eine schnellere Pharmakokinetik besitzt.
Obwohl im Untersuchungszeitraum ausreichende Prednisolon-Konzentrationen nach rektaler Gabe beobachtet wurden, kann die rektale Applikation nicht als äquivalent zur parenteralen Gabe von Glukokortikoiden angesehen werden. Auf dieser Datengrundlage sollte die Injektion von Glukokortikoiden als Mittel der ersten Wahl zur Prävention oder Therapie von NN-Krisen empfohlen werden, bis adäquate medizinische Therapie gewährleistet ist. Die Überlegenheit von parenteralen Glukokortikoiden hält jedoch nur stand, wenn eine gleiche Akzeptanz der Patienten garantiert ist und die Behandlung im gleichen Zeitintervall erfolgt. Die Mehrzahl der untersuchten Patientinnen fürchtet weiterhin eine eigenständige Injektion, welche die Verabreichung verzögern kann und eine potenzielle Gefährdung darstellt. Eine patientenfreundliche ready-to- use Hydrokortison-Injektionsspritze ist weiterhin nicht verfügbar. Zusammenfassend lässt sich sagen, dass die vaginale Verabreichung von Prednison-Suppositorien, in der untersuchten galenischen Formulierung, zwar deutlich einfacher und ohne spezielle Schulung machbar ist, aber zur Prävention oder Behandlung von NN-Krisen nicht ausreicht. Generell sollte die parenterale Injektion von Hydrokortison als erste Wahl zur Prävention von NN-Krisen empfohlen werden, wobei neben regelmäßiger Schulung der Fokus zukünftig auf eine Vereinfachung der Injektion gelegt werden sollte.