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Water‐soluble multinuclear complexes based on ruthenium 2,2′‐bipyridine‐6,6′‐dicarboxylate (bda) and ditopic bipyridine linker units are investigated in three‐component visible light‐driven water oxidation catalysis. Systematic studies revealed a strong enhancement of the catalytic efficiency in the absence of organic co‐solvents and with increasing oligomer length. In‐depth kinetic and morphological investigations suggest that the enhanced performance is induced by the self‐assembly of linear Ru(bda) oligomers into aggregated superstructures. The obtained turnover frequencies (up to 14.9 s\(^{−1}\)) and turnover numbers (more than 1000) per ruthenium center are the highest reported so far for Ru(bda)‐based photocatalytic water oxidation systems.
Eine Reihe von Acetylen-verknüpften Perylenbisimid(PBI)-Makrozyklen mit unterschiedlicher Ringgröße wurde durch Palladium-katalysierte Homokupplung synthetisiert und mit Hilfe von Recycling-GPC getrennt. Diese Makrozyklen wurden durch NMR-Spektroskopie und Massenspektrometrie charakterisiert und weiterhin die photophysikalischen Eigenschaften durch UV/Vis-Absorptions- und Fluoreszenzemissions-Messungen untersucht. Die Selbstorganisation dieser PBI-Makrozyklen zu hochgeordneten Nanostrukturen auf HOPG-Oberflächen wurde mittels Rasterkraftmikroskopie untersucht.
It is demonstrated that the di‐\(\pi\)‐methane (DPM) rearrangement of carbonyl‐substituted dibenzobarrelene (9,10‐dihydro‐9,10‐ethenoanthracene) derivatives is induced by visible‐light‐induced triplet photosensitization with Ir(ppy)\(_{3}\), Ir(dFppy)\(_{3}\) or 1‐butyl‐7,8‐dimethoxy‐3‐methylalloxazine as catalysts, whereas derivatives that lack carbonyl substituents are photoinert under these conditions. Notably, the products are formed almost quantitatively.
The effective binding of anions like carboxylates and phosphates in aqueous solutions is of particular interest for various reasons. The natural archetypes of effective anion receptors are enzymes that contain often arginine as relevant amino acid in the binding pocket. For this reason, one class of artificial anion receptors that emerged more than two decades ago mimics the anion binding with the guanidinium group present in the amino acid side chain. In 1999, Schmuck and coworkers developed a new class of guanidinium-based oxo anion receptor that binds carboxylates even in aqueous media. The binding modes of the 2-(guanidiniocarbonyl)-1H-pyrroles are based on individually weak non-covalent interaction between artificial host and substrate like ion pairing and multiple hydrogen bonds. The zwitterionic derivative with substitution of a carboxylate group in position 5 of the pyrrole ring system shows a strong self-assembly to discrete dimers (dimer 1) with an estimated association constant of 170 M-1 even in water. In order to further improve the structure motif for an effective oxo anion binding it is therefore of great interest to quantify the different intermolecular interactions between two monomeric units of 1. Against this background several theoretical ab initio studies were conducted in order to elucidate the influences of intrinsic properties as well as solvent effects on the stability of self-assembled dimers. In chapter 4.1 the molecular interactions in dimer 1 were investigated by comparison to various “knock-out” analogues. In these analogues single hydrogen bonds were switched off by substitution of hydrogen donor atoms with either methylene groups or ether bridges. The calculations were done for vacuum and solvation, as represented by a conductor-like polarizable continuum. It could be shown that the application of a simple continuum solvent model fails to predict the absolute energies of the knock-out analogues in strongly polar solvents. However, the calculated trends can explain the relative stabilities. In chapter 4.2 the structural similarity of arginine with structure 1 was used in order to examine the dependence of self-assembly from the flexibility of the molecular structure. In chapter 4.2.1 new global minimum structures of the canonical and zwitterionic arginine in gas phase were found by means of exhaustive force field based conformational searches in conjunction with ab initio structure optimizations of the lowest energy conformers. Most of the newly identified minimum conformers of both the zwitterionic and canonical tautomer revealed geometrical arrangements with hitherto unreported stacked orientations of the terminal groups. Finally a novel global minimum structure was detected that is more than 8 kJ mol-1 lower in energy than the previously published conformers. The same strategy for finding minimum energy conformers of the arginine monomer has also been employed for the arginine dimer structures. While previous theoretical studies favoured directed hydrogen bonds the new global minimum structure MMFF1 is about 60 kJ mol-1 more stable and exhibits a stacked orientation of the guanidinium and carboxylate groups. The importance of rigidity on the dimer stability was proven by calculations of an artificially stiffened arginine dimer system. The high binding affinity dimer 1 results by about 50% from the rigidity of the monomers which prevents any intramolecular stabilization. In chapter 4.3 novel structure motifs with varying ring systems have been examined on a DFT level of theory in order to make proposals for an improved carboxylate binding motif. The direct dependency of the dimerization energy on an increasing dipole moment was demonstrated by various anellated ring structures. The influence of the delocalization in the monomer on the dimerization energy was examined by variation of the electronic structure of electronically decoupled biphenylenes. With the aid of various substituted 7-guanidinioindole-2-carboxylate derivatives we could show that the carbonyl function is mainly responsible for the advantageous preorganisation, whereas the effect on the acidity seems to be only of minor importance. In the last chapter cooperativity effects in supramolecular assemblies have been investigated. This was achieved by NMR shift calculations of adenosine-carboxylic acid complexes as model systems and comparison to experimental low-temperature NMR studies. We could demonstrate that only by applying vibrational averaged NMR shifts the experimental proton shifts obtained at very low temperatures in the hydrogen bond exchange regime could be reproduced.
Protein-like enwrapped perylene bisimide chromophore as bright microcrystalline emitter material
(2019)
Strongly emissive solid‐state materials are mandatory components for many emerging optoelectronic technologies, but fluorescence is often quenched in the solid state owing to strong intermolecular interactions. The design of new organic pigments, which retain their optical properties despite their high tendency to crystallize, could overcome such limitations. Herein, we show a new material with monomer‐like absorption and emission profiles as well as fluorescence quantum yields over 90 % in its crystalline solid state. The material was synthesized by attaching two bulky tris(4‐tert‐butylphenyl)phenoxy substituents at the perylene bisimide bay positions. These substituents direct a packing arrangement with full enwrapping of the chromophore and unidirectional chromophore alignment within the crystal lattice to afford optical properties that resemble those of their natural pigment counterparts, in which chromophores are rigidly embedded in protein environments.
Wasserstoffbrückengesteuerte Ausrichtung von Merocyaninfarbstoffen für photorefraktive Materialien
(2008)
Merocyaninchromophore spielen eine herausragende Rolle bei der Entwicklung von photorefraktiven Materialien für Anwendungen in der Holographie. Der photorefraktive Effekt beruht auf einer Orientierung der dipolaren Merocyanine in einem elektrischen Feld. Diese können umso effektiver ausgerichtet werden, je größer ihr Dipolmoment ist. Folglich sollten Merocyanine mit sehr großen Dipolmomenten den gewünschten Effekt hervorbringen. Es hat sich jedoch gezeigt, dass solche Merocyanine Dimere mit antiparalleler zentrosymmetrischer Struktur bilden. In dieser Anordnung addieren sich die Dipolmomente destruktiv, so dass die dipolare Eigenschaft des Materials verloren geht. In dieser Arbeit ist es gelungen, Merocyanine über sechsfache Wasserstoffbrückenbindungen zu supramolekularen Strukturen mit großen resultierenden Dipolmomenten zu assoziieren. Diese Komplexe werden in schwach polaren Lösungsmitteln sogar bei sehr niedrigen Farbstoffkonzentrationen gebildet.
In der vorligenden Arbeit wurden Vanadium-abhängige Bromidperoxidase- (VBPO-) Modelle zur stereoselektiven Synthese funktionalisierter O-Heterocyclen entwickelt, die durch Vanadium-katalysierte Oxygenierung von Bishomoallylalkoholen mechanistisch untersucht wurden. Weiterhin wurden Bromcyclisierungen von Bishomoallylalkoholen auf enzymatischem (VBPO), oxidativem und radikalischem Weg für Referenzprodukte einer neuen Variante der Bromcyclisierung durch Vanadium-katalysierte Bromidoxidation durchgeführt. Die Selektivitätsmuster aus den Synthesen ß-hydroxylierter und ß-bromierter Tetrahydrofurane wurden anschließend innerhalb einfacher Naturstoffsynthesen genutzt. Anhand eigener Vorarbeiten wurden neue Vanadium(V)-Komplexe aus Triethoxyvanadat mit tridentaten Schiffbaseliganden, basierend auf Salicylaldehyd und Aminoalkoholen mit strukturell unterschiedlichen Seitenketten in quantitativen Ausbeuten synthetisiert und charakterisiert (51V-NMR, UV und IR). In Test-Cyclisierungen unterschiedlicher Bishomoallylalkohole eignete sich VO(salin)(OEt) mit hohen Umsätzen und guten Regio- wie Stereoselektivitäten am besten. Die relative Geschwindigkeitskonstante (krel = 120±20) der Vanadium-katalysierten Oxidation des Testsystems konnte über Konkurrenzkinetik (Alkenol versus Alken) ermittelt werden und weist deutlich auf eine Bindung des Alkenols an Vanadium während der Oxidation hin. Um die Regio- und Stereoselektivitäten Vanadium-Schiffbase-katalysierter Oxidationen von Bishomoallylalkoholen verstehen zu können, wurden stereochemische Studien anhand des Testsystems durchgeführt. Dessen Oxidation wird demnach im selektivitätsbestimmenden Schritt dem Metallzentrum abgewandt in like-Position bevorzugt gebildet und führt zu dem cis-konfigurierten Tetrahydrofuran als Hauptprodukt. Im Folgenden wurden Vanadium-katalysierte Oxidationen unterschiedlich substituierter bishomoallylischer Alkohole durchgeführt, sämtliche Oxidationen führten regioselektiv zu Tetrahydrofuranen als Hauptprodukte, die Oxygenierung Dimethyl-substituierter Pentenole lieferte durch Substitution an C-1 selektiv cis-konfigurierte Tetrahydrofurane, 2-Substitution führte ebenso wie 3-Substitution zu trans-konfigurierte Oxolanen. Alkohole nicht aktivierter Olefine wurden in der Reihenfolge C-1 ? C-3 mit höherer Selektivität zu trans-konfigurierten Tetrahydrofuranen gebildet. Die Regio- und Stereoselektivitäten der radikalischen Bromcyclisierungen folgen den schon in früheren Arbeiten unserer Arbeitsgruppe aufgestellten Richtlinien (5-exo-trig; 2,5-trans, 2,4-cis und 2,3-trans). Die ionischen Bromcyclisierungen 5,5-dimethylierter Bishomoallyl-alkohole mittels NBS verliefen komplementär zu den Radikal-Cyclisierungen regioselektiv und in Abhängigkeit der Phenylsubstituenten an C-1 - C-3 stereoselektiv zu den 2,5-trans-, 3,5-cis- und 4,5-trans-konfigurierten Tetrahydropyranen. Aus der Bromcyclisierung prochiraler Pentenole in Gegenwart eines Acetonpulvers aus Ascophyllum nodosum (A.n.A.P.) konnte das b-bromierte Tetrahydrofuran racemisch in 87proz. Ausbeute erhalten werden. Ebensowenig führte der Einsatz chiraler Liganden in der Vanadium-katalysierten Oxygenierung prochiraler Penten-1-ole bei guten Ausbeuten (>80%) zu Enantiomeren-angereicherten Tatrahydrofuranen. Innerhalb einfacher Naturstoffsynthesen wurden cis-Pityol, Linalooloxid sowie (-)-epi-Bisabololoxid selektiv unter Standardbedingungen der Vanadium-Schiffbase-katalysierten Oxidationen mit VO(salin)(OEt) und TBHP dargestellt. Die Stereoselektivitäten steigen proportional zu dem Größenunterschied der Substituenten an Position 1 der Bishomoallylalkohole. Abschließend wurde durch Vanadium-katalysierte Bromidoxiadtion mit TBHP eine neue dreistufige Totalsynthese der vier "natürlichen" Muscarin-Isomere ausgearbeitet. Die Gesamtausbeuten dieser Synthesen liegen zwischen 3.0 und 19.9%.
This thesis deals with the synthesis of improved organic semiconductors, the detailed investigation of the molecular properties and the solid state arrangements revealed by single crystal X-ray diffraction and finally the development of structureperformance dependencies by measuring of the charge carrier mobilities of the derivatives in thin film transistors. The two main-goals of this thesis were achieved. Well soluble acene derivatives for spin-coated TFTs were obtained, showing charge carrier mobilities in the range of polymer p-type materials. Novel core-fluorinated perylene bisimide dyes were synthesized particularly and the use of electron deficient substituents lead to PBIs with outstanding air-stable mobilities in thin film transistors prepared by vacuum deposition techniques. The relationship between performance, air stability and solid state packing was elucidated in detail by single crystal X-ray diffraction analysis.
AbstractWater oxidation catalysis is a key step for sustainable fuel production by water splitting into hydrogen and oxygen. The synthesis of a novel coordination oligomer based on four Ru(bda) (bda = 2,2′‐bipyridine‐6,6′‐dicarboxylate) centers, three 4,4′‐bipyridine (4,4′‐bpy) linkers, and two 4‐picoline (4‐pic) end caps is reported. The monodispersity of this tetranuclear compound is characterized by NMR techniques. Heterogeneous electrochemical water oxidation after immobilization on multi‐walled carbon nanotubes (MWCNTs) shows catalytic performance unprecedented for this compound class, with a turnover frequency (TOF) of 133 s\(^{−1}\) and a turnover number (TON) of 4.89 × 10\(^6\), at a current density of 43.8 mA cm\(^{−2}\) and a potential of 1.45 V versus normal hydrogen electrode (NHE).
As viruses are obligatory intracellular parasites, any step during their life cycle strictly depends on successful interaction with their particular host cells. In particular, their interaction with cellular membranes is of crucial importance for most steps in the viral replication cycle. Such interactions are initiated by uptake of viral particles and subsequent trafficking to intracellular compartments to access their replication compartments which provide a spatially confined environment concentrating viral and cellular components, and subsequently, employ cellular membranes for assembly and exit of viral progeny. The ability of viruses to actively modulate lipid composition such as sphingolipids (SLs) is essential for successful completion of the viral life cycle. In addition to their structural and biophysical properties of cellular membranes, some sphingolipid (SL) species are bioactive and as such, take part in cellular signaling processes involved in regulating viral replication. It is especially due to the progress made in tools to study accumulation and dynamics of SLs, which visualize their compartmentalization and identify interaction partners at a cellular level, as well as the availability of genetic knockout systems, that the role of particular SL species in the viral replication process can be analyzed and, most importantly, be explored as targets for therapeutic intervention.
Utilizing Pd‐catalyzed [5+2] annulation a series of heptagon‐extended corannulenes could be synthesized from a borinic acid precursor furnished by C−H borylation strategy. Single‐crystal X‐ray analysis revealed the presence of two conformational enantiomers crystallizing in a racemic mixture. Through their embedded five‐ and seven‐membered rings these polycyclic aromatic hydrocarbons (PAHs) exhibit both negative and positive curvature and UV/Vis/NIR absorption spectroscopy as well as cyclic voltammetry experiments provided insights into the influence of larger flanking aromatic systems and electron‐donating substituents encompassing the heptagonal ring. Through [5+2] annulation of acenaphthylene an azulene‐containing PAH with intriguing optoelectronical properties including a very small bandgap and absorption over the whole visible spectrum could be obtained. Theoretical calculations were employed to elucidate the long‐wavelength absorption and aromaticity.
Palladium‐catalyzed [5+2] annulation of 1‐boraphenalenes with ortho‐dihaloarenes afforded negatively curved π‐extended pleiadienes. Two benzo[1,2‐i:4,5‐i’]dipleiadienes (BDPs) featuring a seven‐six‐seven‐membered ring arrangement were synthesized and investigated. Their crystal structure revealed a unique packing arrangement and theoretical calculations were employed to shed light onto the dynamic behavior of the BDP moiety and its aromaticity. Further, a naphthalene‐fused pleiadiene was stitched together by oxidative cyclodehydrogenation to yield an additional five‐membered ring. This formal azulene moiety led to distinct changes in optical and redox properties and increased perturbation of the aromatic system.
In this thesis, the synthesis and photophysics of a great variety of squaraine dyes are presented. This variety is based on four parent squaraines containing either indolenine or quinoline heterocycles. By a suitable choice of the donor and acceptor unit, the optical properties can already be adapted to the properties desired on the stage of the monomer.
To promote a further derivatisation of these dyes, diverse functional groups are attached to the monomers using transition metal-catalysed C-C coupling reactions. However, this has to be preceded by the synthesis of bromine-functionalised derivatives as a direct halogenation of squaraine dyes is not feasible. Therefore, the halogen function is already introduced in precursor molecules giving rise to a molecular building block system containing bromine-, boronic ester-, and alkyne-functionalised monomer units, which pave the way to a plethora of squaraine oligomers and polymers.
The indolenine homopolymer pSQB-1 as well as the corresponding small molecular weight oligomers dSQB-1 and tSQB were synthesized applying Ni-mediated Yamamoto and Pd-catalysed Suzuki coupling methodologies, respectively. The motivation for this project relied on the fundamental investigations by Völker et al. on pSQB-V. A progressive red-shift of the lowest energy absorption maximum from the dimer to the polymer was observed in CHCl3 compared to the monomer. With increasing number of monomer units, the exciton coupling decreases from the dimer to the polymer. In addition, the shape of the absorption band manifold shows a strong dependence on the solvent, which was also observed by Völker et al. J-type aggregate behavior is found in chlorinated solvents such as CHCl3 and DCM, whereas H-type aggregates are formed in acetone. Temperature-dependent absorption studies in PhCN reveals a reversible equilibrium of diverse polymer conformers, which manifests itself in a gradual change from H-aggregate behavior to a mixture with a more pronounced J-aggregate behavior upon raising the temperature. It isassumed that both characteristic aggregate bands correlate in borderline cases with two polymer structures which can be assigned to a zig-zag and a helical structure. As no experimental evidence for these structures could hitherto be provided by NMR, TD-DFT computations on oligomers (22-mers) can reproduce very closely the characteristic features of the spectra for the two conformational isomers.
The subsequent chapters are motivated by the goal to influence the optical properties through a control of the superstructure and thus of the intramolecular aggregate formation.
On the one hand, bulky groups are implemented in the 3-position of the indolenine scaffold to provoke steric repulsion and thus favoring J-aggregate behavior at the expense of helical arrangements. The resulting homopolymer pDiPhSQB bearing two phenyl groups per indolenine exhibits J-type aggregate behavior with red-shifted absorption maxima in all considered solvents which is explained to be caused by the formation of elongated zig-zag structures. Furthermore, single-crystal X-ray analysis of monomer DiPhSQB-2-Br2 reveals a torsion of the indolenine moieties as a consequence of steric congestion. The twist of the molecular geometry and the resulting loss of planarity leads to a serious deterioration of the fluorescence properties, however a significant bathochromic shift of ca. 1 200 cm-1 of the lowest absorption band was observed compared to parent SQB, which is even larger than the shift for dSQB-1 (ca. 1 000 cm-1).
On the other hand, a partial stiffening of the polymer backbone is attempted to create a bias for elongated polymer chains. In this respect, the synthetic approach is to replace every second biarylaxis with the rigid transoid benzodipyrrolenine unit. Despite a rather low average degree of polymerization < 10, exclusively red-shifted absorption maxima are observed in all solvents used.
In order to complete the picture of intramolecular aggregates through the selective design of H-aggregates, a squaraine-squaraine copolymer was synthesised containing the classic cisoid indolenine as well as the cisoid quinoline building block. Taking advantage of the highly structure directing self-assembly character of the quinoline moiety, the copolymer pSQBC indeed showes a broad, blue-shifted main absorption band in comparison with the monomer unit dSQBC. The shape of the absorption band manifold solely exhibited a minor solvent and temperature dependence indicating a persistent H-aggregate behaviour. Hence, as a proof of concept, it is shown that the optical properties of the polymers (H- and J-aggregate) and the corresponding superstructure can be inherently controlled by an adequate design of monomer precursors.
The last chapter of this work deals, in contrast to all other chapters, with intermolecular aggregates. It is shown that the two star-shaped hexasquarainyl benzenes hSQA-1 and hSQA-2 exhibit a strong propensity for self-organisation. Concentration- and temperature-dependent studies reveal a great driving force for self-assembly in acetone. While the larger hSQA-2 instantaneously forms stable aggregates, the aggregates of hSQA-1 shows a pronounced kinetic stability. Taking advantage of the kinetic persistency of these aggregates, the corresponding kinetic activation parameters for aggregation and deaggregation can be assessed. The absorption spectra of both hexasquarainyl benzenes in the aggregated state reveal some striking differences. While hSQA-1 features an intensive, very narrow and blue-shifted absorption band, two red-shifted bands are observed for hSQA-2, which are closely located at the monomer absorption. The very small bandwidth of hSQA-1 are interpreted to be caused by exchange narrowing and pointed towards highly ordered supramolecular aggregates. The concentration-dependent data of the two hexasquarainyl benzenes can be fitted to the dimer-model with excellent correlation coefficients, yielding binding constants in excess of 10^6 M-1, respectively. Such high binding constants are very surprising, considering the unfavourable bulky 3,3-dimethyl groups of the indolenine units which should rather prevent aggregation. Joint theoretical and NMR spectroscopic methods were applied to unravel the supramolecular aggregate structure of hSQA-1, which is shown to consist of two stacked hexasquarainyl benzenes resembling the picture of two stacked bowls.
No abstract available
The ongoing transition from fossil to renewable feedstocks demands new efficient processes for an economically viable production of biomass‐derived commodities and fine chemicals. Novel energy‐ and material‐efficient product purification and separation will play a crucial role due to altered product and feed composition. The present study comprises the synthesis and tests of cross‐linked p‐vinylphenylboronate polymers for the separation of 18 diols, sugar alcohols, and saccharides, which can be obtained during biomass processing. The separation was based on molecular recognition, that is, esterification of the phenylboronate with vicinal diols. A correlation of the molecular complexation constant, the polymer swelling, and the maximum adsorption capacity was found. The adsorption curves over time were recorded. Preliminary results on competitive adsorption of binary mixtures showed a high potential for the separation of substrates with significantly different complexation constants. Desorption tests implied easier desorption of substrates that only adsorb on the outer polymer shell.
Many dyes suffer from fast non-radiative decay pathways, thereby showing only short-lived excited states and weak photoluminescence. Here we show a pronounced fluorescence enhancement for a weakly fluorescent merocyanine (MC) dye by being co-facially stacked to other dyes in hetero-folda-trimer architectures. By means of fluorescence spectroscopy (lifetime, quantum yield) the fluorescence enhancement was explained by the rigidification of the emitting chromophore in the defined foldamer architecture and the presence of a non-forbidden lowest exciton state in H-coupled hetero-aggregates. This folding-induced fluorescence enhancement (FIFE) for specific sequences of π-stacked dyes points at a viable strategy toward improved fluorophores that relates to the approach used by nature in the green fluorescent protein (GFP).
The thesis discusses aspects of the photocatalytic water oxidation reaction. The first chapter deals with a supramolecular macrocycle which contains three ruthenium metal centers. This novel catalyst shows promising catalytic activity and provides insides into the mechanism of the water oxidation reaction. After this part, the focus lies on the light interacting components of the photocatalytic water oxidation. In this regard, the azabenz-annulated perylene derivatives appeared to be a promising dye class. The combination of these chromophores and metal complexes result in metal organic compounds, which have photosensitizer potential.
Nanodiamant bietet in der Medizin und in der Biologie zahlreiche Anwendungsmöglichkeiten aufgrund der guten Biokompatibilität und geringen Toxizität. Durch die umfangreichen Funktionalisierungsmöglichkeiten der Oberfläche der nanometergroßen Partikel können viele unterschiedliche Wirkstoffe, Rezeptormoleküle oder Peptidsequenzen angebunden werden ,die zusammen mit Nanodiamant ein anderes, durchaus besseres Wirkprofil aufweisen als der Wirkstoff allein. Ziel dieser Arbeit war die Synthese eines pH-labilen Linkersystems, dass hydroxylhaltige Wirkstoffe kovalent bindet und zusammen mit Nanodiamant in die Zelle, in der ein saurer pH-Wert herrscht, eingeschleust werden. Über die Änderung des pH-Wertes in der Zelle soll der Wirkstoff freigesetzt werden und seine Wirkung entfalten können.
Weiterhin wurde ein pH-labiles Linkersystem auf der Basis eines Hydrazons hergestellt. Über das synthetisierte Hydrazinderivat können Wirkstoffe, die über eine Aldehyd- oder Ketonfunktion verfügen angebunden werden und pH-labil in der Zelle freigesetzt werden. Zusätzlich trägt der Nanodiamant ein kovalent angebundenes Targeting-Molekül, welches eine verbesserte Adressierung der Wirkorte gewähr¬leisten soll. Die Freisetzung wurde mittels UV-Vis-Spektroskopie detektiert und ausgewertet.
Neben der spezifischen Funktionalisierung von Nanodiamant besitzt auch die Interaktion der Nanodiamantpartikel mit biologischen Medien eine besondere Bedeutung für zukünftige biomedizinische Anwendungen. Wenn die Partikeloberfläche durch Proteinadsorption gegenüber dem Wirkort abgeschirmt wird, so kann der angebundene Wirkstoff gegebenenfalls nicht freigesetzt werden und somit nicht seine Wirkung entfalten und bleibt letztlich ungenutzt. So war es von besonderem Interesse die Wechselwirkungen von Nanodiamant in Humanserum und auch weiteren physiologischen Medien zu untersuchen. Dabei wurden sowohl freie Nanodiamantpartikel als auch solche, die auf klinisch bereits eingesetzten Gerüstmaterialien im Bereich der Therapie großer Knochendefekte adsorbiert waren, untersucht. Auch wurden die Wechselwirkungen von Nanodiamant mit der physiologischen Umgebung untersucht, die zur Agglomeration der Nanopartikel führen können. Es wurde ein unter¬schiedliches Agglomerationsverhalten der Nanodiamanten in wässriger Umgebung verglichen mit Nanodiamanten in physiologischen Medien sowie deren Stabilität im Serum beobachtet.
Durch die in dieser Arbeit vorgestellten Untersuchungen konnten wichtige Erkenntnisse zur Wechselwirkung verschieden präparierter und funktionalisierter Nanodiamanten mit physiologisch relevanten Umgebungen sowie zu stimuli-responsiven Wirkstofffreisetzung aus Nanodiamant-Konjugaten gewonnen werden. Zudem wurde mit der Untersuchung der angelagerten Proteine um Nanodiamant ein erster Schritt in Richtung eines umfassenden Verständnisses der Wechselwirkung dieses Materials mit biologischen Umgebungen unternommen. Auch wenn diese Wechselwirkungen sehr komplex sind, so sind erste Aussagen bezüglich der Art der angelagerten Proteine möglich. Erste Versuche der Stabilisierung von Nanodiamant in physiologischen Medien wurden ebenfalls erfolgreich durchgeführt und zeigen eine effiziente und einfache Möglichkeit, Nanodiamant in biologischen Medien vor der Agglomeration zu bewahren. Die im Rahmen dieser Arbeit gewonnen Erkenntnisse bezüglich mehrfacher Funktionalisierungsmöglichkeiten von Nanodiamant sowie dessen Stabilisierung in physiologischen Medien zeigen die breite Anwendungsmöglichkeit und das enorme Potential von Nanodiamant im Bereich medizinischer und biologischer Anwendungen auf.
Eine molekulare Fliegenfalle zur Erkennung von biologisch relevanten (poly)-anionischen Substraten
(2006)
Im Rahmen dieser Arbeit konnte ein multivalenter Rezeptor auf Basis von Guanidiniocarbonylpyrrolen zur Komplexierung von biologisch relevanten (poly)- anionischen Substraten wie Citrat, Malat und Tatrat dargestellt werden. Der Rezeptor bindet Citrat selbst in Gegenwart eines 1000fachen Überschusses an NaCl und einem 10fachen Überschuss an Bis-tris Puffer mit einer hohen Bindungskonstante von KAss = 86000 M-1 in Wasser. Wenn man Rezeptoren auf Metall- und Boronsäurebasis nicht berücksichtigt, handelt es sich nach meinem Wissen um den besten Citrat-Rezeptor, der in der Literatur bisher publiziert ist. Außerdem zeigt der Rezeptor mit einem Faktor von mindestens 8 eine hohe Selektivität für Citrat gegenüber anderen biologisch relevanten Dicarboxylaten wie Malat und Tatrat. Mithilfe von Bindungsstudien und Molecular Modeling Rechnungen konnte hergeleitet werden, welchen Einfluss die verschiedenen nicht-kovalenten Wechselwirkungen auf die Bindungskonstante haben. Dabei konnte gezeigt werden, dass Flexibilität, Hydroxy-Funktionen, pi-Stacking und Symmetrie bei den Substraten Einfluss auf die Bindungskonstanten zeigen, wobei vor allem die unpolaren Wechselwirkungen und die zusätzliche Hydroxy-Funktionen einen hohen Anteil an der Bindung zu haben scheinen. Neben der selektiven Erkennung von Citrat durch den Rezeptor konnte zusätzlich ein Sensorsystem mit Carboxyfluorescein auf Basis eines indicator displacement assays entwickelt werden, mit dem die Anwesenheit von Citrat im Gegensatz zu anderen Carboxylaten mit dem bloßen Auge (naked eye) erkannt werden kann. Neben den Polycarboxylaten zeigt der Rezeptor außerdem noch hohe Bindungskonstanten für polyanionische Zucker. So konnten z.B. für Glucophosphate mit UV-Spektroskopie Bindungskonstanten von KAss = ca. 20000 M-1 in dem sehr polaren Lösemittelgemisch 10 % DMSO/Wasser (pH = 4, Acetat-Puffer) gefunden werden.
In the first part of this thesis, the synthesis of a series of bistriarylamine (bisTAA) compounds was presented. On the one hand, the substitution pattern of the TAA at the benzene bridging unit was varied from meta- to para-position (pX and mX), on the other hand, the energetic position of the bridging unit was tuned by use of two electron-donating or electron-accepting substituents X (with X = OMe, Me, Cl, CN, NO2) in 2,5-position. In case of the meta-series, compounds with X in 4,6-position were synthesized (mX46). The photophysical and electrochemical properties of the neutral compounds were investigated.
The cationic mixed valence (MV) bisTAA compounds could be generated by oxidation. Thermally induced hole transfer (HT) in the groud state was investigated by temperature depending ESR spectroscopy. While the HT rate k and HT barrier ΔG in mX are unaffected by the substituents X, k and ΔG in the pX series increase simultaneously with increasing electron-donating strength of X. This, at first contradictory observation can be explained by an increasingly important solvent dynamic effect and an additional, effective barrier. The optically induced HT was examined by UV/Vis/NIR spectroscopy. The pX-series revealed an increase of the electronic coupling V, and correspondingly a decrease of ΔG, with an increase of the electron donating character of X. For mX, a spectroscopic determination of these parameters was not possible. mX46 showed an intermediate behavior, MV compounds with strong electron-donating X, obtained coupling of similar magnitude as pX, which could be explained by means of DFT calculations, with regard to the molecular orbitals.
In the second part of this work, the synthesis of a series of dyads with triarylamine (TAA) as a donor and naphthalene diimide (NDI) as an acceptor was presented. Again, the substitution pattern of the redox centers at the benzene bridging unit was varied in the form of a meta- or para-position (pXNDI or mXNDI) and the energetic position of the bridging unit was varied by X (with X = OMe, Me, Cl, CN, NO2) attached in the 2,5-position. Additionally, compound mOMe46NDI with methoxy substitution in 4,6-position was synthesized. The photophysical and electrochemical properties of these compounds were investigated. The electron transfer (ET) processes of charge separation (CS) and charge recombination (CR) of these were investigated by means of transient absorption (TA) spectroscopy in toluene. This was not possible for the nitro-compounds p-/mNO2NDI, since they decomposed under irradiation. In addition to that, the CR of pXNDI was not detectable by ns-setup, which is why the focus was given to the mXNDI series (with X = OMe–CN).The CS was examined by fs-TA spectroscopy, where the formation of a CS state could be detected. The rise time of the CS states decreases with increasing electron-withdrawing substituents X. CR was examined with ns-TA spectroscopy and shows a biexponential decay behavior, which is caused by singlet-triplet equilibrium in the CS state. By applying an external magnetic field, the decay behavior was decisively changed and the singlet-triplet splitting could be determined. This finding could also be confirmed by simulating the decay curves.
In both parts of this work, the decisive influence of the benzene bridging unit on the appearing ET processes became obvious. For the HT in the ground state of the MV compound, as well as for the ET in the exited states of the DA compounds, the highest transfer rates were found for the para-series pX and pXNDI, and much smaller rates for the meta-series mX and mXNDI. The meta46-compounds mX46 and mOMeNDI46 showed an intermediate behavior in both parts of this work.
A highly strained covalent organic cage compound was synthesized from hexahydroxy tribenzotriquinacene (TBTQ) and a meta-terphenyl-based diboronic acid with an additional benzoic acid substituent in 2’-position. Usually, a 120° bite angle in the unsubstituted ditopic linker favors the formation of a [4+6] cage assembly. Here, the introduction of the benzoic acid group is shown to lead to a perfectly preorganized circular hydrogen-bonding array in the cavity of a trigonal-bipyramidal [2+3] cage, which energetically overcompensates the additional strain energy caused by the larger mismatch in bite angles for the smaller assembly. The strained cage compound was analyzed by mass spectrometry and \(^{1}\)H, \(^{13}\)C and DOSY NMR spectroscopy. DFT calculations revealed the energetic contribution of the hydrogen-bonding template to the cage stability. Furthermore, molecular dynamics simulations on early intermediates indicate an additional kinetic effect, as hydrogen bonding also preorganizes and rigidifies small oligomers to facilitate the exclusive formation of smaller and more strained macrocycles and cages.
The indepth metabolic profiling of the crude extracts of two African Ancistrocladus species viz. A. likoko from Central Africa and A. abbreviatus from West Africa, resulted in a total of 87 alkaloids among them 54 new ones. All of the compounds were intensely elucidated by 1D and 2D NMR, HRESIMS, as well as chemical and chiroptical techniques.
Among the newly discovered compounds are quinoid naphthylisoquinolines with an ortho-diketone in the naphthalene portion, nor-naphthylisoquinoline alkaloid lacking the always present methyl group at C-1, seco-(ring cleaved) naphthylisoquinolines, and a newly discovered class of natural products called the naphthylisoindolinones.
Some of the compounds displayed strong antitumoral activities against human pancreatic cancer cells and leukemia cells in-vitro.
RNA-cleaving deoxyribozymes have found broad application as useful tools for RNA biochemistry. However, tedious in vitro selection procedures combined with laborious characterization of individual candidate catalysts hinder the discovery of novel catalytic motifs. Here, we present a new high-throughput sequencing method, DZ-seq, which directly measures activity and localizes cleavage sites of thousands of deoxyribozymes. DZ-seq exploits A-tailing followed by reverse transcription with an oligo-dT primer to capture the cleavage status and sequences of both deoxyribozyme and RNA substrate. We validated DZ-seq by conventional analytical methods and demonstrated its utility by discovery of novel deoxyribozymes that allow for cleaving challenging RNA targets or the analysis of RNA modification states.
Deoxyribozymes are synthetic enzymes made of DNA that can catalyze the cleavage or formation of phosphodiester bonds and are useful tools for RNA biochemistry. Here we report new RNA-cleaving deoxyribozymes to interrogate the methylation status of target RNAs, thereby providing an alternative method for the biochemical validation of RNA methylation sites containing N\(^6\)-methyladenosine, which is the most wide-spread and extensively investigated natural RNA modification. Using in vitro selection from random DNA, we developed deoxyribozymes that are sensitive to the presence of N\(^6\)-methyladenosine in RNA near the cleavage site. One class of these DNA enzymes shows faster cleavage of methylated RNA, while others are strongly inhibited by the modified nucleotide. The general applicability of the new deoxyribozymes is demonstrated for several examples of natural RNA sequences, including a lncRNA and a set of C/D box snoRNAs, which have been suggested to contain m\(^6\)A as a regulatory element that influences RNA folding and protein binding.
The thesis describes the development of new synthetic strategies towards planar nanometer-sized and electron-deficient polycyclic aromatic dicarboximides, which are rather unexplored compared with the large variety of electron-rich polycyclic aromatic hydrocarbons and nanographenes. Thus, new polycyclic aromatic systems containing a different number of dicarboximide groups were designed since this class of compounds has revealed its significance in the past due to a range of desirable molecular properties and its high thermal and photochemical stability. The synthetic concept towards these systems includes different C–C coupling techniques that were combined within coupling cascade reactions. Therefore, this thesis provides new insights into the reactivity of aromatic substrates and elucidates mechanistic aspects of C–C coupling cascade reactions to facilitate the precise design of new and desirable materials based on polycyclic aromatic dicarboximides. Furthermore, structure-property relationships as well as the optical and electrochemical properties were investigated by UV/Vis absorption and fluorescence spectroscopy and cyclic or square wave voltammetry. Insights into the molecular structures in the solid state were obtained by single-crystal X-ray analysis. In subsequent studies, highly electron-deficient perylene bisimides and their reduced species have been investigated in detail. Thus, core-functionalized perylene bisimides were synthesized and UV/Vis absorption spectroscopy, spectroelectrochemistry and cyclic or square wave voltammetry were used to determine their optical properties and the stability of the individual reduced species.
Herein, we report the one-pot synthesis of an electron-poor nanographene containing dicarboximide groups at the corners. We efficiently combined palladium-catalyzed Suzuki-Miyaura cross-coupling and dehydrohalogenation to synthesize an extended two-dimensional pi-scaffold of defined size in a single chemical operation starting from N-(2,6-diisopropylphenyl)-4,5-dibromo-1,8-naphthalimide and a tetrasubstituted pyrene boronic acid ester as readily accessible starting materials. The reaction of these precursors under the conditions commonly used for Suzuki-Miyaura cross-coupling afforded a C\(_{64}\) nanographene through the formation of ten C-C bonds in a one-pot process. Single-crystal X-ray analysis unequivocally confirmed the structure of this unique extended aromatic molecule with a planar geometry. The optical and electrochemical properties of this largest ever synthesized planar electron-poor nanographene skeleton were also analyzed.
Beyond the four canonical nucleosides as primary building blocks of RNA, posttranscriptional modifications give rise to the epitranscriptome as a second layer of genetic information. In eukaryotic mRNA, the most abundant posttranscriptional modification is N6-methyladenosine (m6A), which is involved in the regulation of cellular processes. Throughout this thesis, the concept of atomic mutagenesis was employed to gain novel mechanistic insights into the substrate recognition by human m6A reader proteins as well as in the oxidative m6A demethylation by human demethylase enzymes. Non-natural m6A atomic mutants featuring distinct steric and electronic properties were synthesized and incorporated into RNA oligonucleotides. Fluorescence anisotropy measurements using these modified oligonucleotides revealed the impact of the atomic mutagenesis on the molecular recognition by the human m6A readers YTHDF2, YTHDC1 and YTHDC2 and allowed to draw conclusions about structural prerequisites for substrate recognition. Furthermore, substrate recognition and demethylation mechanism of the human m6A demethylase enzymes FTO and ALKBH5 were analyzed by HPLC-MS and PAGE-based assays using the modified oligonucleotides synthesized in this work.
Modified nucleosides not only expand the genetic alphabet, but are also extensively researched as drug candidates. In this thesis, the antiviral mechanism of the anti-SARS-CoV-2 drug remdesivir was investigated, which causes delayed stalling of the viral RNA-dependent RNA polymerase (RdRp). Novel remdesivir phosphoramidite building blocks were synthesized and used to construct defined RNA-RdRp complexes for subsequent studies by cryogenic electron microscopy (cryo-EM). It was found that the 1'-cyano substituent causes Rem to act as a steric barrier of RdRp translocation. Since this translocation barrier can eventually be overcome by the polymerase, novel derivatives of Rem with potentially improved antiviral properties were designed.
N\(^6\)-methyladenosine (m\(^6\)A) is an important modified nucleoside in cellular RNA associated with multiple cellular processes and is implicated in diseases. The enzymes associated with the dynamic installation and removal of m\(^6\)A are heavily investigated targets for drug research, which requires detailed knowledge of the recognition modes of m\(^6\)A by proteins. Here, we use atomic mutagenesis of m\(^6\)A to systematically investigate the mechanisms of the two human m\(^6\)A demethylase enzymes FTO and ALKBH5 and the binding modes of YTH reader proteins YTHDF2/DC1/DC2. Atomic mutagenesis refers to atom-specific changes that are introduced by chemical synthesis, such as the replacement of nitrogen by carbon atoms. Synthetic RNA oligonucleotides containing site-specifically incorporated 1-deaza-, 3-deaza-, and 7-deaza-m\(^6\)A nucleosides were prepared by solid-phase synthesis and their RNA binding and demethylation by recombinant proteins were evaluated. We found distinct differences in substrate recognition and transformation and revealed structural preferences for the enzymatic activity. The deaza m\(^6\)A analogues introduced in this work will be useful probes for other proteins in m\(^6\)A research.
A series of monomeric chirally substituted indolenine squaraine monomers were successfully synthesized and utilized for the construction of various oligo- and polymers, in order to study their chiroptical properties in terms of exciton chirality. The quaternary carbon atom at the 3-position of the indolenine subunit, as well as the alkyl side chain attached to the indolenine nitrogen were selected as the most suitable site for chiral functionalization.
For the C(3)-chiral derivatives, two synthetic routes depending on the desired substitution at the stereogenic center were established. The chiral side chains were prepared via Evans asymmetric alkylation where the resulting branching point at the 2 position constituted the chiral center. While the chiral substitution only had minor effects on the linear optical properties and geometric structure of the chromophore, all compounds exhibited a distinct and measurable CD signal that correlated with the distance of the chiral center to the central chromophore.
Polymers bearing chiral side chains exhibited a solvent- and temperature-dependent helix-coil equilibrium, which was influenced by the type of side chain used. CD spectroscopy revealed the helical conformation to possess a preferred twist sense, and temperature-dependent measurements showed the degree of homohelicity to be nearly complete in certain cases. Furthermore, a CPL signal was able to be obtained for the helical conformer of one polymer.
Various (co)oligo- and polymers comprising the C(3)-chiral monomers only displayed a solvent-independent J-type absorption behavior and thus did not form helical conformations in solution. CD spectroscopy revealed a solvent-dependent adoption of quasi-enantiomeric conformers, which was elucidated by quantum chemical TDDFT calculations.
Die Chlorophylle stellen in der Natur die wichtigsten Pigmente dar, weil sie verantwortlich für die Photosynthese sind und hierbei vielfältige Funktionen wahrnehmen, die sich aus ihrer Selbstassemblierung sowie den vorteilhaften optischen und Redox-Eigenschaften ergeben. Die in dieser Arbeit untersuchten semisynthetischen Zinkchlorine stellen Modellverbindungen des natürlichen Bacteriochlorophylls c (BChl c) der Lichtsammelsysteme (light-harvesting: LH) in Chlorosomen von Bakterien, jedoch ohne Proteingerüst, dar. Die entscheidenden Vorteile dieser Zinkchlorine (ZnChl) gegenüber den natürlichen BChls bestehen im einfachen semisynthetischen Zugang ausgehend von Chlorophyll a (Chl a), ihrer gesteigerten chemischen Stabilität sowie der Möglichkeit ihre Selbstassemblierung durch gezielte chemische Modifizierung der Seitenketten in der Peripherie zu steuern. Während bereits mehrfach über die vielversprechenden Redox- und excitonischen Eigenschaften von Aggregaten von ZnChl und natürlichem BChl c und den damit verbundene Voraussetzungen für Excitontransport über große Distanzen berichtet wurde, sind die Ladungstransporteigenschaften von Aggregaten der biomimetischen ZnChl bis heute unerforscht. Die vorliegende Arbeit beschäftigt sich mit der Aufklärung der Struktur von Aggregaten einer Vielzahl von semisynthetischen Zinkchlorophyllderivaten im Feststoff, in Lösung und auf Oberflächen durch die Kombination verschiedenster spektroskopischer, kristallographischer und mikroskopischer Techniken an die sich Untersuchungen zum Ladungstransport in den Aggregaten anschließen. Schema 1 zeigt die verschiedenen, in dieser Arbeit synthetisierten ZnChls, die entweder mit einer Hydroxy- oder Methoxygruppe in der 31-Position funktionalisiert sind sowie Substituenten unterschiedlicher Art, Länge und Verzweigung an der Benzylestergruppe in 172-Position tragen.Die Packung dieser Farbstoffe hängt entscheidend von ihrer chemischen Struktur ab. Während die ZnChls 1a, 2a, 3 mit 31-Hydroxygruppe und Alkylseitenketten (Dodecyl bzw. Oligoethylenglykol) gut lösliche stabförmige Aggregate bilden, lagern sich die analogen Verbindungen mit 31-Methoxygruppe (1b, 2b) zu Stapeln in Lösung und auf Oberflächen zusammen. Diese supramolekularen Polymere wurden im Detail in Kapitel 3 mit Hilfe von UV/Vis- und CD-Spektroskopie (circular dichroism: CD) sowie dynamische Lichtstreuung (dynamic light scattering: DLS) untersucht. Darüber hinaus lieferten temperaturabhängige UV/Vis- in Kombination mit DLS-Messungen wertvolle Informationen über die Aggregationsprozess dieser beiden Sorten von Aggregaten. Während sich die ZnChl 1a mit 31 Hydroxygruppe entsprechend dem isodesmischen Modell zu röhrenförmigen Aggregaten zusammenlagern, bilden sich die stapelförmigen Aggregate von 1b nach einem kooperativen Keimbildungs-Wachstums-Mechanismus (nucleation-elongation mechanism). Detaillierte elektronenmikroskopische Studien lieferten erstmals überzeugende Beweise für röhrenförmige Nanostrukturen der Aggregate des wasserlöslichen 31-Hydroxy Zinkchlorin 3. Die gemessenen Durchmesser der Röhren von ~ 5-6 nm dieser Aggregate liegen in hervorragender Übereinstimmung mit den Elektronenmikroskopie-Daten von BChl c Stabaggregaten in Chlorosomen (Chloroflexus aurantiacus, Durchmesser ~ 5-6 nm) und entsprechen damit dem von Holzwarth und Schaffner postulierten röhrenförmigen Modell... Im Einklang mit ihren hoch geordneten, robusten Strukturen, die sich eindimensional in einer Größenordnung von Mikrometeren erstrecken, sowie ihrer Fähigkeit zum effizienten Ladungs-trägertransport stellen diese selbstassemblierten Nanoröhren von ZnChls vielversprechende Ausgangsmaterialien für die Fertigung supramolekularer elektronischer Bauteile dar. Wissenschaftliche Bemühungen einige dieser Moleküle und ihre entsprechenden supramolekularen Polymere für die Fertigung von (opto-)elektronischen Bauteilen wie organischen Feldeffekttransistoren zu benutzten, stellen lohnende Aufgaben für die Zukunft dar...
Bedingt durch ihre strukturelle Diversität und biologischen Eigenschaften sind Naturstoffe seit jeher Quelle und Inspiration für Arzneimittel vor allem im therapeutischen Bereich der Onkologie und der Infektionskrankheiten. Ihr einzigartiges pharmakologisches Potenzial wird durch die selektive Interaktion mit einer Vielzahl von Zielmolekülen hervorgerufen. Aufgrund der zentralen Bedeutung von Naturstoffen in der Entdeckung und Entwicklung von neuen Arzneimitteln sind nach wie vor die Isolierung und Strukturaufklärung, die totalsynthetische Darstellung und Derivatisierung sowie die Identifizierung der Zielmoleküle und die Aufklärung des Wirkmechanismus dieser natürlichen Wirkstoffe unabdingbar.
Die kleine, aber spannende Klasse der Naphthylisochinolin-Alkaloide, die ausschließlich aus den beiden Pflanzenfamilien der Dioncophyllaceae und der Ancistrocladaceae gewonnen werden, zeichnet sich mit ihren mehr als 200 Vertretern nicht nur durch ihre strukturelle Vielfalt aus, sondern zeigt vor allem pharmakologisch interessante Wirksamkeiten. Neben ausgeprägten In-vitro-Aktivitäten gegen protozoische Erreger wie Leishmanien, Plasmodien und Trypanosomen besitzen die Vertreter dieser einzigartigen Naturstoffklasse nach neuesten Untersuchungen auch vielversprechende antitumorale Aktivitäten. Für deren Weiterentwicklung zu möglichen Arzneistoffen ist es daher unabdingbar, ihr pharmakologisches Potenzial tiefergehend zu untersuchen.
Ziel der vorliegenden Dissertation war die Entwicklung totalsynthetischer Zugänge zu biologisch interessanten Naphthylisochinolin-Alkaloiden mit Hilfe unterschiedlicher Synthesestrategien. Ebenfalls sollten durch die Darstellung strukturell vereinfachter Derivate sowie markierter Naturstoffe in Zusammenarbeit mit Kooperationspartnern mögliche Zielmoleküle identifiziert und Beiträge zum Wirkmechanismus untersucht werden.
Our research group focusses on the isolation, structural elucidation, and synthesis of bioactive natural products, among others, the naphthylisoquinoline alkaloids from tropical lianas. This intriguing class of compounds comprises representatives with activities against, e.g. P. falciparum, the cause of Malaria tropica, against the neglected disease leishmaniasis, and, as discovered more recently, against different types of cancer cells. Based on the high potency of theses extraordinary secondary metabolites, this thesis was devoted to the total synthesis of bioactive natural products and closely related analogs.
The objective of this thesis focuses on the development of strategies for precise control of perylene bisimide (PBI) self-assembly and the in-depth elucidation of structural and optical features of discrete PBI aggregates by means of NMR and UV/Vis spectroscopy. The strategy for discrete dimer formation of PBIs is based on delicate steric control that distinguishes the two facets of the central perylene surface. The strategy applied in this thesis for accessing discrete PBI quadruple and further oligomeric stacks relies on backbone-directed PBI self-assembly. For this purpose, two tweezer-like PBI dyads bearing the respective rigid backbones, diphenylacetylene (DPA) and diphenylbutydiyne (DPB), were synthesized. The distinct aggregation behavior of these structurally similar PBI dyads can be ascribed to the intramolecular distance between the two PBI chromophores imparted by the DPA and DPB spacers.
Squaraine dyes have attracted more attention in the past decade due to their strong and narrow absorption and fluorescence along with the easily functionalized molecular structure. One successful approach of core functionalization is to replace one oxygen of the squaric carbonyl group with a dicyanomethylene group, which shifts the absorption and emission into the near infrared (NIR) region and at the same time leads to a rigid, planar structure with C2v symmetry. However, such squaraines tend to aggregate cofacially in solution due to dispersion forces and dipole-dipole interactions, usually leading to H-type exciton coupling with undesired blue-shifted spectrum and quenched fluorescence. Therefore, the goal of my research was the design of dicyanomethylene-substituted squaraine dyes that self-assemble into extended aggregates in solution with J-type coupling, in order to retain or even enhance their outstanding optical properties. Toward this goal, bis(squaraine) dyes were envisioned with two squaraine units covalently linked to trigger a slip-stacked packing motif within the aggregates to enable J-type coupling.
In my first project, bis(squaraine) dye BisSQ1 was synthesized, in which two dicyanomethylene squaraine chromophores are covalently linked. Concentration and temperature-dependent UV/Vis/NIR spectroscopy experiments reveal that BisSQ1 undergoes cooperative self-assembly resulting in J-type aggregates in a solvent mixture of toluene/1,1,2,2-tetrachloroethane (TCE) (98:2, v/v). The J type exciton coupling is evident from the significantly red shifted absorption maximum at 886 nm and the fluorescence peak at 904 nm. In conclusion, this was a first example to direct squaraine dye aggregation in solution to the more desired slip-stacked packing leading to J-type exciton coupling by simply connecting two dyes in a head-to-tail bis chromophore structure.
Connecting two squaraine dyes with an additional phenylene spacer (BisSQ2) leads to two different polymorphs with very distinct absorption spectra upon cooling down a solution of BisSQ2 in a solvent mixture of toluene/TCE (98:2, v/v) with different rates. Accordingly, rapid cooling resulted in rigid helical nanorods with an absorption spectrum showing a panchromatic feature, while slow cooling led to a sheet-like structure with a significant bathochromic shift in the absorption spectrum.
It was discovered that the conventional molecular exciton model failed to explain the panchromatic absorption features of the nanorods for the given packing arrangement, therefore more profound theoretical investigations based on the Essential States Model (ESM) were applied to unveil the importance of intermolecular charge transfer (ICT) to adequately describe the panchromatic absorption spectrum. Moreover, the red-shift observed in the spectrum for the sheet-like structure can be assigned to the interplay of Coulomb coupling and ICT-mediated coupling.
Furthermore, the same bis-chromophore strategy was adopted for constructing an NIR-II emitter with a bathochromically-shifted spectrum. In chloroform, BisSQ3 exhibits an absorption maximum at 961 nm with a significant bathochromic shift (1020 cm−1) compared to the reference mono-squaraine SQ, indicating intramolecular J-type coupling via head-to-tail arrangement of two squaraine dyes. Moreover, BisSQ3 shows a fluorescence peak at 971 nm with a decent quantum yield of 0.33%. In less polar toluene, BisSQ3 self-assembles into nanofibers with additional intermolecular J-type coupling, causing a pronounced bathochromic shift with absorption maximum at 1095 nm and a fluorescence peak at 1116 nm. Thus, connecting two quinoline-based squaraines in a head-to-tail fashion leads to not only intra-, but also intermolecular J-type exciton coupling, which serves as a promising strategy to shift the absorption and emission of organic fluorophores into the NIR-II window while retaining decent quantum yields.
In conclusion, my research illustrates based on squaraine dyes how a simple modification of the molecular structure can significantly affect the aggregation behavior and further alter the optical properties of dye aggregates. Elongated supramolecular structures based on dicyanomethylene substituted squaraine dyes were successfully established by covalently linking two squaraine units to form a bis-chromophore structure. Then, a simple but efficient general approach was established to direct squaraine dye aggregation in solution to the more desired slip-stacked packing leading to J-type exciton coupling by directly connecting two squaraine dyes in a head-to-tail fashion without spacer units. Moreover, the additional spacer between the squaraine dyes in BisSQ2 allowed different molecular conformations, which leads to two different morphologies depending on the cooling rates for a hot solution. Hence, this is a promising strategy to realize supramolecular polymorphism.
In general, it is expected that the concept of constructing J-aggregates by the bis-chromophore approach can be extended to entirely different classes of dyes since J-aggregates possess a variety of features such as spectral shifts into the NIR window, fluorescence enhancement, and light harvesting, which are commonly observed and utilized for numerous fundamental studies and applications. Moreover, the insights on short-range charge transfer coupling for squaraine dyes is considered of relevance for all materials based on alternating donor-acceptor π-systems. The panchromatic spectral feature is in particular crucial for acceptor-donor-acceptor (ADA) dyes, which are currently considered as very promising materials for the development of bulk heterojunction solar cells.
A bis(squaraine) dye equipped with alkyl and oligoethyleneglycol chains was synthesized by connecting two dicyanomethylene substituted squaraine dyes with a phenylene spacer unit. The aggregation behavior of this bis(squaraine) was investigated in non-polar toluene/tetrachloroethane (98:2) solvent mixture, which revealed competing cooperative self-assembly pathways into two supramolecular polymorphs with entirely different packing structures and UV/Vis/NIR absorption properties. The self-assembly pathway can be controlled by the cooling rate from a heated solution of the monomers. For both polymorphs, quasi-equilibrium conditions between monomers and the respective aggregates can be established to derive thermodynamic parameters and insights into the self-assembly mechanisms. AFM measurements revealed a nanosheet structure with a height of 2 nm for the thermodynamically more stable polymorph and a tubular nanorod structure with a helical pitch of 13 nm and a diameter of 5 nm for the kinetically favored polymorph. Together with wide angle X-ray scattering measurements, packing models were derived: the thermodynamic polymorph consists of brick-work type nanosheets that exhibit red-shifted absorption bands as typical for J-aggregates, while the nanorod polymorph consists of eight supramolecular polymer strands of the bis(squaraine) intertwined to form a chimney-type tubular structure. The absorption of this aggregate covers a large spectral range from 550 to 875 nm, which cannot be rationalized by the conventional exciton theory. By applying the Essential States Model and considering intermolecular charge transfer, the aggregate spectrum was adequately reproduced, revealing that the broad absorption spectrum is due to pronounced donor-acceptor overlap within the bis(squaraine) nanorods. The latter is also responsible for the pronounced bathochromic shift observed for the nanosheet structure as a result of the slip-stacked arranged squaraine chromophores.
Nucleic acids are one of the important classes of biomolecules together with carbohydrates, proteins and lipids. Both deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) are most well known for their respective roles in the storage and expression of genetic information.
Over the course of the last decades, nucleic acids with a variety of other functions have been discovered in biological organisms or created artificially. Examples of these functional nucleic acids are riboswitches, aptamers and ribozymes. In order to gain information regarding their function, several analytical methods can be used.
Electron paramagnetic resonance (EPR) spectroscopy is one of several techniques which can be used to study nucleic acid structure and dynamics. However, EPR spectroscopy requires unpaired electrons and because nucleic acids themselves are not paramagnetic, the incorporation of spin labels which carry a radical is necessary.
Here, three new spin labels for the analysis of nucleic acids by EPR spectroscopy are presented. All of them share two important design features. First, the paramagnetic center is located at a nitroxide, flanked by ethyl groups to prevent nitroxide degradation, for example during solid phase synthesis. Furthermore, they were designed with rigidity as an important quality, in order to be useful for applications like pulsed electron double resonance (PELDOR) spectroscopy, where independent motion of the spin labels relative to the macromolecule has a noticeable negative effect on the precision of the measurements.
Benzi-spin is a spin label which differs from most previous examples of rigid spin labels in that rather than being based on a canonical nucleoside, with a specific base pairing partner, it is supposed to be a universal nucleoside which is sufficiently rigid for EPR measurements when placed opposite to a number of different nucleosides. Benzi-spin was successfully incorporated into a 20 nt oligonucleotide and its base pairing behavior with seven different nucleosides was examined by UV/VIS thermal denaturation and continuous wave (CW) EPR experiments. The results show only minor differences between the different nucleosides, thus confirming the ability of benzi-spin to act as a universally applicable spin label.
Lumi-spin is derived from lumichrome. It features a rigid scaffold, as well as a free 2'-hydroxy group, which should make it well suited for PELDOR experiments once it is incorporated into RNA oligonucleotides.
EÇr is based on the Ç family of spin labels, which contains the most well known rigid spin labels for nucleic acids to this day. It is essentially a version of EÇm with a free 2'-hydroxy group. It was converted to triphosphate EÇrTP and used for primer extension experiments to test the viability of enzymatic incorporation of rigid spin labels into oligonucleotides as an alternative to solid-phase synthesis. Incorporation into DNA by Therminator III DNA polymerase in both single-nucleotide and full-length primer extensions was achieved.
All three of these spin labels represent further additions to the expanding toolbox of EPR spectroscopy on nucleic acids and might prove valuable for future research.
The objective of this thesis was the synthesis and characterisation of two linear multifunctional PEG-alternatives for bioconjugation and hydrogel formation: i) Hydrophilic acrylate based copolymers containing peptide binding units and ii) hydrophilic polyether based copolymers containing different functional groups for a physical crosslinking.
In section 3.1 the successful synthesis of water soluble and linear acrylate based polymers containing oligo(ethylene glycol) methyl ether acrylate with either linear thioester functional 2-hydroxyethyl acrylate, thiolactone acrylamide, or vinyl azlactone via the living radical polymerisation technique Reversible Addition Fragmentation Chain Transfer (RAFT) and via free-radical polymerisation is described. The obtained polymers were characterized via GPC, 1H NMR, IR and RAMAN spectroscopy.
The RAFT end group was found to be difficult to remove from these short polymer chains and accordingly underwent the undesired side reaction aminolysis with the peptide during the conjugation studies. Besides that, polymers without RAFT end groups did not show any binding of the peptide at the thioester groups, which can be improved in future by using higher reactant concentrations and higher amount of binding units at the polymer. Polymers containing the highly reactive azlactone group showed a peptide binding of 19 %, but unfortunately this function also underwent spontaneous hydrolysis before the peptide could even be bound. In all cases, oligo(ethylene glycol) methyl ether acrylate was used with a relatively high molecular weight (Mn = 480 Da) was used, which eventually was efficiently shielding the introduced binding units from the added peptide. In future, a shorter monomer with Mn = 300 Da or less or hydrophilic N,N’-dialkyl acrylamide based polymers with less steric hindrance could be used to improve this bioconjugation system. Additionally, the amount of monomers containing peptide binding units in the polymer can be increased and have an additional spacer to achieve higher loading efficiency.
The water soluble, linear and short polyether based polymers, so called polyglycidols, were successfully synthesized and modified as described in section 3.2. The obtained polymers were characterized using GPC, 1H NMR, 31P{1H} NMR, IR, and RAMAN spectroscopy. The allyl groups which were present up to 20 % were used for radical induced thiol-ene chemistry for the introduction of functional groups intended for the formation of the physically crosslinking hydrogels. For the positively charged polymers, first a chloride group had to be introduced for the subsequent nucleophilic substitution with the imidazolium compound. There, degrees of modifications were found in the range 40-97 % due to the repulsion forces of the charges, decreased concentration of active chloride groups, and limiting solution concentrations of the polymer for this reaction. For the negatively charged polymers, first a protected phosphonamide moiety was introduced with a deprotection step afterwards showing 100 % conversion for all reactions. Preliminary hydrogel tests did not show a formation of a three-dimensional network of the polymer chains which was attributed to the short backbone length of the used polymers, but the gained knowledge about the synthetic routes for the modification of the polymer was successfully transferred to longer linear polyglycidols. The same applies to the introduction of electron rich and electron poor compounds showing π-π stacking interactions by UV-vis spectroscopy.
Finally, long linear polyglycidyl ethers were synthesised successfully up to molecular weights of Mn ~ 30 kDa in section 3.3, which was also proven by GPC, 1H NMR, IR and RAMAN spectroscopy. This applies to the homopolymerisation of ethoxyethyl glycidyl ether, allyl glycidyl ether and their copolymerisation with an amount of the allyl compound ~ 10 %. Attempts for higher molecular weights up to 100 kDa showed an uncontrolled polymerisation behaviour and eventually can be improved in future by choosing a lower initiation temperature. Also, the allyl side groups were modified via radical induced thiol-ene chemistry to obtain positively charged functionalities via imidazolium moieties (85 %) and negatively charged functionalities via phosphonamide moieties (100 %) with quantitative degree of modifications. Hydrogel tests have still shown a remaining solution by using long linear polyglycidols carrying negative charges with long/short linear polyglycidols carrying positive charges. The addition of calcium chloride led to a precipitate of the polymer instead of a three-dimensional network formation representing a too high concentration of ions and therefore shielding water molecules with prevention from dissolving the polymer. These systems can be improved by tuning the polymers structure like longer polymer chains, longer spacer between polymer backbone and charge, and higher amount of functional groups.
The objective of the thesis was partly reached containing detailed investigated synthetic routes for the design and characterisation of functional polymers which could be used in future with improvements for bioconjugation and hydrogel formation tests.
Obligate human pathogenic Neisseria gonorrhoeae are the second most frequent bacterial cause of sexually transmitted diseases. These bacteria invade different mucosal tissues and occasionally disseminate into the bloodstream. Invasion into epithelial cells requires the activation of host cell receptors by the formation of ceramide-rich platforms. Here, we investigated the role of sphingosine in the invasion and intracellular survival of gonococci. Sphingosine exhibited an anti-gonococcal activity in vitro. We used specific sphingosine analogs and click chemistry to visualize sphingosine in infected cells. Sphingosine localized to the membrane of intracellular gonococci. Inhibitor studies and the application of a sphingosine derivative indicated that increased sphingosine levels reduced the intracellular survival of gonococci. We demonstrate here, that sphingosine can target intracellular bacteria and may therefore exert a direct bactericidal effect inside cells.
This work is concerned with the syntheses and photophysical properties of para-xylylene bridged macrocycles nPBI with ring sizes from two to nine PBI units, as well as the complexation of polycyclic aromatic guest compounds.
With a reduced but substantial fluorescence quantum yield of 21% (in CHCl3) the free host 2PBI(4-tBu)4 can be used as a dual fluorescence probe. Upon encapsulation of rather electron-poor guests the fluorescence quenching interactions between the chromophores are prevented, leading to a significant fluorescence enhancement to > 90% (“turn-on”). On the other hand, the addition of electron-rich guest molecules induces an electron transfer from the guest to the electron-poor PBI chromophores and thus quenches the fluorescence entirely (“turn-off”). The photophysical properties of the host-guest complexes were studied by transient absorption spectroscopy. These measurements revealed that the charge transfer between guest and 2PBI(4-tBu)4 occurs in the “normal region” of the Marcus-parabola with the fastest charge separation rate for perylene. In contrast, the charge recombination back to the PBI ground state lies far in the “inverted region” of the Marcus-parabola.
Beside complexation of planar aromatic hydrocarbons into the cavity of the cyclophanes an encapsulation of fullerene into the cyclic trimer 3PBI(4-tBu)4 was observed. 3PBI(4-tBu)4 provides a tube-like structure in which the PBI subunits represent the walls of those tubes. The cavity has the optimal size for hosting fullerenes, with C70 fitting better than C60 and a binding constant that is higher by a factor of 10. TA spectroscopy in toluene that was performed on the C60@3PBI(4-tBu)4 complex revealed two energy transfer processes. The first one comes from the excited PBI to the fullerene, which subsequently populates the triplet state. From the fullerene triplet state a second energy transfer occurs back to the PBI to generate the PBI triplet state.
In all cycles that were studied by TA spectroscopy, symmetry-breaking charge separation (SB-CS) was observed in dichloromethane. This process is fastest within the PBI cyclophane 2PBI(4-tBu)4 and slows down for larger cycles, suggesting that the charge separation takes place through space and not through bonds. The charges then recombine to the PBI triplet state via a radical pair intersystem crossing (RP-ISC) mechanism, which could be used to generate singlet oxygen in yields of ~20%.
By changing the solvent to toluene an intramolecular folding of the even-numbered larger cycles was observed that quenches the fluorescence and increases the 0-1 transition band in the absorption spectra. Force field calculations of 4PBI(4-tBu)4 suggested a folding into pairs of dimers, which explains the remarkable odd-even effect with respect to the number of connected PBI chromophores and the resulting alternation in the absorption and fluorescence properties. Thus, the even-numbered macrocycles can fold in a way that all chromophores are in a paired arrangement, while the odd-numbered cycles have open conformations (3PBI(4-tBu)4, 5PBI(4-tBu)4, 7PBI(4-tBu)4) or at least additional unpaired PBI unit (9PBI(4-tBu)4).
With these experiments we could for the first time give insights in the interactions between cyclic PBI hosts and aromatic guest molecules. Associated with the encapsulation of guest molecules a variety of possible applications can be envisioned, like fluorescence sensing, chiral recognition and photodynamic therapy by singlet oxygen generation. Particularly, these macrocycles provide photophysical relaxation pathways of PBIs, like charge separation and recombination and triplet state formation that are hardly feasible in monomeric PBI dyes. Furthermore, diverse compound specific features were found, like the odd-even effect in the folding process or the transition of superficial nanostructures of the tetrameric cycle influenced by the AFM tip. The comprehensive properties of these macrocycles provide the basis for further oncoming studies and can serve as an inspiration for the synthesis of new macrocyclic compounds.
Cofacial positioning of two perylene bisimide (PBI) chromophores at a distance of 6.5 angstrom in a cyclophane structure prohibits the otherwise common excimer formation and directs photoexcited singlet state relaxation towards intramolecular symmetry-breaking charge separation (τ\(_{CS}\) = 161 +/- 4 ps) in polar CH\(_2\)Cl\(_2\), which is thermodynamically favored with a Gibbs free energy of ΔG\(_{CS}\) = -0.32 eV. The charges then recombine slowly in τ\(_{CR}\) = 8.90 +/- 0.06 ns to form the PBI triplet excited state, which can be used subsequently to generate singlet oxygen in 27% quantum yield. This sequence of events is eliminated by dissolving the PBI cyclophane in non-polar toluene, where only excited singlet state decay occurs. In contrast, complexation of electron-rich aromatic hydrocarbons by the host PBI cyclophane followed by photoexcitation of PBI results in ultrafast electron transfer (<10 ps) from the guest to the PBI in CH\(_2\)Cl\(_2\). The rate constants for charge separation and recombination increase as the guest molecules become easier to oxidize, demonstrating that charge separation occurs close to the peak of the Marcus curve and the recombination lies far into the Marcus inverted region.
Electroactive Conjugated Polymers as Charge-Transport Materials for Optoelectronic Thin-Film Devices
(2005)
In this work the electrochemical and spectroelectrochemical properties of a series of pi-conjugated organic polymers were studied. The polymers were deposited on platinum electrodes or ITO-coated glass substrates by potentiodynamic electro-polymerisation of the corresponding monomeric precursor molecules. The electro-chemical and photophysical properties of the triarylborane monomers were studied in detail in order to estimate possible influences on the behaviour of the corresponding polymer. The first part of this work aimed at the synthesis and investigation of conjugated donor–acceptor polymers which combine the prerequisites of an OLED within one material: the transport of positive and negative charges and the formation of emissive excited states. With the carbazole-substituted oxadiazoles 1–3 it was shown that on the one hand the carbazole functionality is suitable for enabling the electrochemical polymerisation of the monomers and on the other hand it facilitates reversible p-doping of the resultant polymers. Although n-doping of poly-1–poly-3 is possible due to the electron-deficient oxadiazole rings, it causes the continuous degradation of these electron-acceptor units. Interestingly, this process does not influence the capability of p-doping of the polymers. With respect to its electrochemical and spectroelectrochemical properties the behaviour of the borane polymer poly-4 is absolutely identical with that of the oxadiazole polymers. Moreover, the optical excitation of poly-4 in the solid state leads to the emission of blue-green light which suggests that this polymer might also possess electroluminescent properties. AFM-measurements of poly-4 films on ITO-coated glass substrates revealed, that the film thickness can be controlled to a certain extent by the number of polymerisation redox cycles. It was shown from the electrochemical and photophysical properties of the triarylboranes 4–6 that the pi–pi-interaction between boron and nitrogen atoms is comparably weak in these molecules. This leads to an unexpected ground-state polarisation with a partially positive boron atom and a partially negative nitrogen atom. Moreover, it was found that TAB 4 possesses a lower symmetry than D3 in solution and that excitation energy can be transferred amongst the three subchromophores of 4. By titration experiments it was also demonstrated that TAB 4 can reversibly bind fluoride ions and that the binding event significantly influences the optical absorption characteristics of the chromophore. It can be assumed, that the above mentioned properties, which have a profound influence on the photophysical behaviour of these triarylborane chromophores, also determine the behaviour of the corresponding polymer in a solid state environment. The aim of the second part of this work was the investigation of purely n-conducting materials based on electron-deficient borane and viologen polymers. The corresponding precursor molecules should be polymerised on platinum electrodes by reductive electropolymerisation. However, a reductive polymerisation was not possible for the borane monomer 19 which is thought to be due to a strong localisation of the unpaired electron on the central boron atom of the radical anion. An electropolymerisation of the cyano-substituted bispyridinio-compound 17 failed because of the poor quality of CN– as a leaving group. Thus, a synthesis of the analogous isomer 18 was developed, in which the cyano-substituents were exchanged by the better leaving group Cl–. The viologen polymer poly-18, which can be regarded as an electron-deficient iso-electronic analogue of poly(para-phenylene), was successfully deposited on a platinum electrode by reductive electropolymerisation of 18. Poly-18 can be reversibly n-doped at comparably low potentials; however, at higher potentials the polymer is overcharged and destroyed irreversibly. As the synthetic strategy for 18 allows the variation of both spacer unit and leaving group in the last two steps of the reaction sequence, a series of analogous compounds can be easily synthesised using this route.
Results ofan ab initio study ofthe hyperfine structure of the X\(^2\)A', A\(^2\) A" ( 1\(^2 \Pi\)) system ofthe formyl radical are presented. Special attention is paid to the analysis of the interplay between the vibronic and magnetic hyperfine etfects. The results of computations are in very good agreement with the available experimental findings. The values for the hyperfine coupling constants in lower bending Ievels of both electronic species are predicted.
No abstract available
The focus of this work was the investigation of energy transfer between charge transfer states. For this purpose the multidimensional chromophores HAB-S, HAB-A, B1 and B2 were synthesised, each consisting of three electron donor and three electron acceptor redox centres linked symmetrically or asymmetrically by the hexaarylbenzene framework. Triarylamines represent in all these compounds the electron donors, whereas the electron poor centres were triarylboranes in B1 and B2 and PCTM centres in HAB-S and HAB-A, respectively. The hexaarylbenzenes were obtained by cobalt catalysed cyclotrimerisation of the respective tolan precursors. In addition, Star was synthesised, which consists of a central PCTM linked to three triarylamin centres by tolan bridging units in a star-like configuration. The hexaarylbenzene S1a/b substituted with six squaraine chromophores could not be realised. It is assumed that the cyclotrimerisation catalyst Co2(CO)8 does not tolerate the essential hydroxyl groups in the tolan precursor S2a. The alternative reaction pathway to execute the cyclotrimerisation reaction first and introduce the hydroxyl groups thereafter failed as well, because the required hexaarylbenzene substituted by six semisquaric acid moieties could not be synthesised. However, energy transfer interactions could be investigated in the tolan precursor S2a with two squaraine units to obtain information about the electronic coupling provided by the tolan bridge. For all multidimensional compounds model molecules were synthesised with only a single donor-acceptor pair (B3, Star-Model and HAB-Model). This allows a separate consideration of energy and charge transfer processes. It has to be stressed that in all before mentioned multidimensional compounds the “through bond” energy transfer interaction between neighbouring IV-CT states is identical to a transfer of a single electron between two redox centres of the same kind (e.g. TAA -> TAA+). The latter can be analysed by electron transfer theory. This situation is observed when the two IV-CT states transferring energy share one redox centre.
All compounds containing PCTM centres were characterised by paramagnetic resonance spectroscopy. Thereby, a weak interaction between the three PCTM units in HAB-S and HAB-A was observed. In addition, when oxidising Star-Model, a strongly interacting singlet or triplet state was obtained. In contrast, signals corresponding to a weakly interacting biradical were obtained for HAB-Model+. This indicates a strong electronic coupling between the redox centres provided by the tolan bridge and a weak coupling when linked by the hexaarylbenzene. This trend is supported by UV/Vis/NIR absorption measurements. The analysis of the observed IV-CT absorption bands by electron transfer theory reveals a weak electronic coupling of V = 340 cm-1 in HAB-Model and a distinctly stronger coupling of V = 1190-2900 cm-1 in Star-Model. In the oxidised HAB-S+, Star+ and Star-Model+ a charge transfer reversed from that of the neutral species, that is, from the PCTM radical to the electron poorer cationic TAA centre, was observed by spectroelectrochemistry. The temporal evolution of the excited states was monitored by ultrafast transient absorption measurements. Within the first picosecond stabilisation of the charge transfer state was observed, induced by solvent rotation. Anisotropic transient absorption measurements revealed that within the lifetime of the excited state (tau = 1-4 ps) energy transfer does not occur in the HABs whereas in the star-like system ultrafast and possibly coherent energy redistribution is observed. Taken this information together the identity between energy transfer and electron transfer in the specific systems were made apparent. It has to be remarked that neither energy transfer nor charge transfer theory can account for the very fast energy transfer in Star.
The electrochemical and photophysical properties of B1 and B2 were investigated by cyclic voltammetry, absorption and fluorescence measurements and were compared to B3 with only one neighbouring donor-acceptor pair. For the asymmetric B2 CV measurements show three oxidations as well as three reduction peaks whose peak separation is greatly influenced by the conducting salt due to ion-pairing and shielding effects. Consequently, peak separations cannot be interpreted in terms of electronic couplings in the generated mixed valence species. Transient absorption, fluorescence solvatochromism and absorption spectra show that charge transfer states from the amine to the boron centres are generated after optical excitation. The electronic donor-acceptor interaction is weak though as the charge transfer has to occur predominantly through space. The electronic coupling could not be quantified as the CT absorption band is superimposed by pi-pi* transitions localised at the amine and borane centres. However, this trend is in good agreement to the weak coupling measured for HAB-Model. Both transient absorption and fluorescence upconversion measurements indicate an ultrafast stabilisation of the charge transfer state in B1- B3 similar to the corresponding observations in HAB-S and Star. Moreover, the excitation energy of the localised excited charge transfer states can be redistributed between the aryl substituents of these multidimensional chromophores within fluorescence lifetime (ca. 60 ns). This was proved by steady state fluorescence anisotropy measurements, which further indicate a symmetry breaking in the superficially symmetric HAB. Anisotropic fluorescence upconversion measurements confirm this finding and reveal a time constant of tau = 2-3 ps for the energy transfer in B1 and B2. It has to be stressed that, although the geometric structures of B1 and HAB-S are both based on the same framework and furthermore the neighbouring CT states show in both cases similar Coulomb couplings and negligible “through bond” couplings, very fast energy transfer is observed in B1 whereas in HAB-S the energy is not redistributed within the excited state lifetime. To explain this, it has to be kept in mind that the energy transfer and the relaxation of the CT state are competing processes. The latter is influenced moreover by the solvent viscosity. Hence, it is assumed that this discrepancy in energy transfer behaviour is caused by monitoring the excited state in solvents of varying viscosity. Adding fluoride ions causes the boron centres to lose their acceptor ability due to complexation. Consequently, the charge transfer character in the donor-acceptor chromophores vanishes which could be observed in both the absorption and fluorescence spectra. However, the fluoride sensor ability of the boron centre is influenced strongly by the moisture content of the solvent possibly due to hydrogen bonding of water to the fluoride anions.
UV/Vis/NIR absorption measurements of S2a show a red-shift by 1800 cm-1 of the characteristic squarain band compared to the model compound S20. From exciton theory a Coulomb coupling of V = 410 cm-1 is calculated which cannot account for this strong spectral shift. Consequently, “through-bond” interactions have to contribute to the strong communication between the two squaraine chromophores in S2a. This is in accordance with the strong charge transfer coupling calculated for the tolan spacer in Star-Model.
Der bekannteste Vertreter der Bispidine ist das Lupinenalkaloid (–)-Spartein, das vor allem in enantioselektiven Deprotonierungen aber auch Übergangsmetall-katalysierten asymmetrischen Reaktionen als Ligand der Wahl eingesetzt wird. Daneben gibt es nur wenige weitere synthetische Vertreter, da keine flexiblen Darstellungsmethoden zu enantiomerenreinen Bispidinen mit variablen Substituenten in 2-endo-Position existieren. Ein zielgerichtetes Design solcher Verbindungen war daher bisher nur eingeschränkt möglich. So sollte in dieser Arbeit eine neue Substanzklasse als chirale Liganden in der asymmetrischen Synthese etabliert werden: 2-endo-substituierte 9-Oxabispidine. Das Brücken-Sauerstoffatom sollte die Synthese stark vereinfachen. Insgesamt wurden drei strategisch unterschiedliche Methoden zur enantioselektiven Synthese von 2-endo-substituierten 9-Oxabispidinen entwickelt. Zunächst ist die sehr kurze Route zu 2-endo-Phenyl-substituierten Derivaten mit diversen Resten R' an den Stickstoff-Funktionen zu nennen. Ausgehend von käuflichem (R,R)-Phenylglycidol wurde (S,S)-3-Benzylamino-3-phenyl-1,2-propandiol dargestellt, das in einer Dreistufen-Eintopf-Reaktion mit (S)-Epichlorhydrin kondensiert und zum all-cis-konfigurierten 2,6-Dimesyloxymethyl-3-phenylmorpholin mesyliert wurde. Die finale Cylisierung erfolgte mit primären Aminen zu verschiedenen 2-endo-Phenyl-9-oxabispidinen in insgesamt drei bis fünf Stufen. Die Darstellung des tricyclischen 9-Oxa-Derivats eines bekannten (+)-Spartein-Ersatzstoffs gelang nach einem verwandten Syntheseprotokoll. Für eine effiziente Variation des 2-endo-Substituenten auf einer späten Synthesestufe wurde zunächst enantiomerenreines 3N-Boc-7N-Methyl-9-oxabispidin-2-on als Schlüsselintermediat ausgewählt, das aus (R)-Epichlorhydrin und racemischem Glycidsäuremethylester dargestellt wurde. Die weitere Überführung in die 9-Oxabispidine wurde durch Grignard-Addition, Abspaltung der N-Boc-Gruppe vom resultierenden, ringoffenen N-Boc-Aminoketon, Cyclisierung zum Imin und abschließende, exo-selektive Reduktion oder Hydrierung erreicht. So wurden bi- und tricyclische 9-Oxabispidine in nur drei Stufen und 51% Ausbeute synthetisiert. Ein größeres Potenzial besitzt jedoch der primär von David Hein parallel zu den eigenen Arbeiten entwickelte Zugang über ein cis-konfiguriertes 6-(N-Boc-Aminomethyl)morpholin-2-carbonitril als zentrale Zwischenstufe, das auch im 10-g-Maßstab problemlos erhältlich war. Die allgemeine Anwendbarkeit und Flexibilität dieser Methode wurde anhand der Darstellung einer Reihe an 9-Oxabispidinen demonstriert. Die dargestellten chiralen 9-Oxabispidine wurden erstmalig in den folgenden fünf unterschiedlichen Gebieten der asymmetrischen Synthese getestet: Organolithium- und Organomagnesium-vermittelte Umsetzungen sowie Pd(II)-, Cu(II) und Zink(II)-katalysierte Reaktionen. Für enantioselektive Deprotonierungen schwach C-H-acider Verbindungen mit sBuLi erwiesen sich die 9-Oxabispidine als ungeeignet, da sie selbst in Brückenkopfposition lithiiert wurden. Die Stabilität der resultierenden -Lithioether war unerwartet hoch; sie ließen sich beispielsweise bei -78 °C in guten Ausbeuten mit Elektrophilen abfangen. Umlagerungen traten erst beim Aufwärmen ein, wenn kein Elektrophil als Reaktionspartner zur Verfügung stand. Als definierte Produkte wurden dabei Ring-kontrahierte N,O-Acetale erhalten. Zusammen mit den weniger basischen Grignard-Reagenzien wurden die 9-Oxabispidine erfolgreich zur Desymmetrisierung von meso-Anhydriden verwendet. Bei Pd(II)-katalysierten oxidativen kinetischen Racematspaltungen sekundärer Alkohole konnten mit einem 9-Oxabispidin-Pd(II)-Katalysator Selektivitätsfaktoren s vergleichbar zu denen mit (–)-Spartein erzielt werden. Die Ursache für die geringere Reaktivität der 9-Oxabispidin-Komplexe liegt gemäß quantenchemischen Berechnungen in der Elektronegativität des Brücken-Sauerstoffatoms, was die Elektronendichte am Palladiumatom verringert. In Kooperation mit David Hein wurde ein von einem tricyclischen 9-Oxabispidin abgeleiteter Cu-Katalysator entwickelt, der bei der Addition von Nitromethan an zahreiche aromatische, heteroaromatische und aliphatische Aldehyde exzellente Enantioselektivitäten im Bereich von 91–97% lieferte. Mit bicyclischen, 2-endo-substituierten 9-Oxabispidinen als chiralen Liganden wurden hingegen lediglich 33-57% ee erreicht bemerkenswerterweise entstanden hierbei bevorzugt die enantiokomplementären β-Nitroalkohole. In Zusammenarbeit mit Janna Börner aus der Arbeitsgruppe von S. Herres-Pawlis wurde der erste chirale, neutrale Diamin-Zink(II)-Katalysator für die Ringöffnungs-Polymerisation von D,L-Lactid entwickelt. Die Reaktion benötigte kein weiteres anionisches Additiv und konnte ohne Lösungsmittel mit nicht-aufgereinigtem, käuflichem Lactid durchgeführt werden.
Die Produktion von Abwehr-, Signal- und Botenstoffen sichert vielen Pflanzen und Mikroorganismen das Überleben in einer sich ständig wandelnden Umwelt mit zahlreichen Konkurrenten und Feinden. Diese Sekundärmetabolite können oft medikamentös gegen Pathogene eingesetzt werden, die den Menschen befallen und Krankheiten verursachen. Die Herausforderung besteht dabei in der selektiven und sensitiven Detektion, der schonenden Isolierung und der richtigen und kompletten Strukturaufklärung dieser Moleküle, sowie der eventuellen synthetischen Modifikation, um eine bessere Verträglichkeit oder Wirkung für den menschlichen Körper zu erreichen. Leistungsfähige chromatographische Instrumente zur Trennung wie HPLC und CZE, emfindliche Detektoren wie UV- und Massenspektrometer, sowie aussagekräftige Messverfahren zur Charakterisierung struktureller Merkmale wie NMR- und CD-Spektroskopie und quantenchemische Rechnungen sind dabei von essentieller Bedeutung.
Mit diesen – und weiteren – Methoden gelang in der vorliegenden Arbeit die Detektion, Isolierung und Strukturaufklärung neuer Naphthylisochinolin-Alkaloide aus zwei tropischen Ancistrocladus-Lianen, die Charakterisierung von bekannten und neuen Polyketiden aus einem Pilz der Gattung Streptomyces, sowie die Analyse von Glucosinolaten im Phloemsaft der Modellpflanze Arabidopsis thaliana.