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The Folding Landscapes of Human Telomeric RNA and DNA G‐Quadruplexes are Markedly Different

Zitieren Sie bitte immer diese URN: urn:nbn:de:bvb:20-opus-238917
  • We investigated the folding kinetics of G‐quadruplex (G4) structures by comparing the K\(^{+}\)‐induced folding of an RNA G4 derived from the human telomeric repeat‐containing RNA (TERRA25) with a sequence homologous DNA G4 (wtTel25) using CD spectroscopy and real‐time NMR spectroscopy. While DNA G4 folding is biphasic, reveals kinetic partitioning and involves kinetically favoured off‐pathway intermediates, RNA G4 folding is faster and monophasic. The differences in kinetics are correlated to the differences in the folded conformations of RNAWe investigated the folding kinetics of G‐quadruplex (G4) structures by comparing the K\(^{+}\)‐induced folding of an RNA G4 derived from the human telomeric repeat‐containing RNA (TERRA25) with a sequence homologous DNA G4 (wtTel25) using CD spectroscopy and real‐time NMR spectroscopy. While DNA G4 folding is biphasic, reveals kinetic partitioning and involves kinetically favoured off‐pathway intermediates, RNA G4 folding is faster and monophasic. The differences in kinetics are correlated to the differences in the folded conformations of RNA vs. DNA G4s, in particular with regard to the conformation around the glycosidic torsion angle χ that uniformly adopts anti conformations for RNA G4s and both, syn and anti conformation for DNA G4s. Modified DNA G4s with \(^{19}\)F bound to C2′ in arabino configuration adopt exclusively anti conformations for χ. These fluoro‐modified DNA (antiTel25) reveal faster folding kinetics and monomorphic conformations similar to RNA G4s, suggesting the correlation between folding kinetics and pathways with differences in χ angle preferences in DNA and RNA, respectively.zeige mehrzeige weniger

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Metadaten
Autor(en): Diana Müller, Irene Bessi, Christian Richter, Harald Schwalbe
URN:urn:nbn:de:bvb:20-opus-238917
Dokumentart:Artikel / Aufsatz in einer Zeitschrift
Institute der Universität:Fakultät für Chemie und Pharmazie / Institut für Organische Chemie
Sprache der Veröffentlichung:Englisch
Titel des übergeordneten Werkes / der Zeitschrift (Englisch):Angewandte Chemie International Edition
Erscheinungsjahr:2021
Band / Jahrgang:60
Heft / Ausgabe:19
Erste Seite:10895
Letzte Seite:10901
Originalveröffentlichung / Quelle:Angewandte Chemie International Edition 2021, 60(19):10895–10901. DOI: 10.1002/anie.202100280
DOI:https://doi.org/10.1002/anie.202100280
Allgemeine fachliche Zuordnung (DDC-Klassifikation):5 Naturwissenschaften und Mathematik / 54 Chemie / 540 Chemie und zugeordnete Wissenschaften
Freie Schlagwort(e):G-quadruplexes; TERRA RNA; folding landscapes; kinetics; real-time NMR spectroscopy
Datum der Freischaltung:20.12.2021
Lizenz (Deutsch):License LogoCC BY: Creative-Commons-Lizenz: Namensnennung 4.0 International