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Integrative, three-dimensional \(in\) \(silico\) modeling of gas exchange in the human alveolus
(2024)
The lung plays a vital role by exchanging respiratory gases. At the core of this gas exchange is a simple yet crucial passive diffusion process occurring within the alveoli. These balloon-like structures, connected to the peripheral airways, are surrounded by a dense network
of small capillaries. Here, inhaled air comes into close proximity with deoxygenated blood coming from the heart, enabling the exchange of oxygen and carbon dioxide across their concentration gradients.
The efficiency of gas exchange can be measured through indicators such as the diffusion capacity of the lung for oxygen and the reaction half-time. A notable discrepancy exists in humans between physiological estimates of diffusion capacity and the theoretical maximum capacity under optimal structural conditions (morphological estimate). This discrepancy is influenced by a range of interrelated factors, including structural elements like the surface area and thickness of the diffusion barrier, as well as physiological factors such as blood flow dynamics. To unravel the different roles of these factors, we investigated how morphological and physiological properties of the human alveolar micro-environment collectively and individually influence the process of gas exchange. To this end, we developed an integrative in silico approach combining 3D morphological modeling and simulation of blood flow and of oxygen transport.
At the core of our approach lies the simulation software Alvin, serving as an interactive platform for the underlying mathematical model of oxygen transport within the alveolus. Developed by integrating and expanding existing mathematical models, our spatio-temporal model produces results in agreement with experimental data. Alvin allows for real-time parameter adjustments and the execution of multiple simultaneous simulation instances and provides detailed quantitative feedback, offering an immersive exploration of the simulated gas exchange process. The morphological and physiological parameters at play were further investigated with a focus on the microvasculature. By compiling a stereological database from the literature and 3D geometric modeling, we created a sheet-flow model as a realistic representation of the morphology of the human alveolar capillary network. Blood flow was simulated using computational fluid dynamics. Our findings were in line with previous estimations and highlighted the crucial role of viscosity models in predicting pressure drop across the microvasculature. Furthermore, we showcased how our approach can be harnessed to explore structural details, such as the connectivity of the alveolar capillary network with the vascular tree, using blood flow indices. It is important to emphasize that
so far we have relied on different data sources and that experimental validation is needed to move forward.
Integration of our findings into Alvin allowed quantification of the simulated gas exchange process through the diffusion capacity for oxygen and reaction half-time. In addition to evaluating the collective influences of the morphological and physiological properties, our interactive software facilitates the assessment of individual parameter value changes. Exploring blood volume and surface area available for gas exchange revealed linear correlations with diffusion capacity. The blood flow velocity had a positive, non-linear effect on diffusion capacity. The reaction half-time confirmed that under normal conditions, the gas exchange process is not diffusion-limited. Collectively, our alveolar model yielded a diffusion capacity value that fell in the middle of previous physiological and morphological estimates, implying that alveolar-level phenomena contribute to 50% of the diffusion capacity limitations that occur in vivo.
In summary, our integrative in silico approach disentangles various structural and functional influences on alveolar gas exchange, complementing traditional investigations in respiratory
research. We further showcase its utility in teaching and the interpretation of published data. To advance our understanding, future work should prioritize obtaining a cohesive experimental data set and identifying an appropriate viscosity model for blood flow simulations.
Die Gesellschaft altert und es erhalten vermehrt geriatrische Patienten radikale urologische Eingriffe. Alte Patienten haben im Rahmen derartiger Operationen ein erhöhtes Risiko sowohl für Komplikation, verschlechtertes funktionelles Outcome und Mortalität. Da alte Patienten dennoch von den Operationen profitieren können und diese auch weitgehend sicher bei diesen durchgeführt werden können, gilt es das geriatrische Patientenklientel in Bezug auf ihre Konstitution präoperativ genauer zu evaluieren.
Die Erlanger Pilotstudie, an die sich vorliegende Arbeit anlehnt, hat dazu einen Index für Patienten ≥ 70 Jahre mit geplanter Prostatektomie, Nephrektomie und Zystektomie entwickelt, der sowohl das postoperative funktionelle Outcome nach 30 bzw. 180 Tagen, wie auch die Mortalität, nicht aber Komplikationen signifikant korrekt vorhersagen konnte. Ziel vorliegender Arbeit war es, die Prädiktivität des Erlangen Index hinsichtlich dieser vier Endpunkte in einer prospektiv angelegten Studie mit n=46 Patienten ≥ 65 Jahre am Universitätsklinikum Würzburg zu validieren. Es sollte dabei im Speziellen die in der Erlanger Pilotstudie erfasste gute Prädiktivität des Erlangen Index für das funktionelle Outcome nach 180 Tagen überprüft werden.
In dieser Arbeit zeigte sich der Erlangen Index prädiktiv für das funktionelle Outcome nach 180 Tagen. Für die anderen Endpunkte konnte keine Prädiktivität des Erlangen Index festgestellt werden. Durch vorliegende Studie konnte die schlechte Prädiktion der Komplikationen durch den EI bestätigt werden. Anders als in der Pilotstudie war der Erlangen Index in vorliegender Studie zur Vorhersage des funktionellen Outcome nach 30 Tagen und der Mortalität nicht geeignet. Bei Betrachtung der Untergruppen nach Art der Operation zeigte der EI starke Korrelationen für die Prädiktion des funktionellen Outcome nach 180 Tagen in den Gruppen der Patienten nach Prostata- und Harnblasenoperation. Die Ergebnisse decken sich somit nur teilweise mit den Ergebnissen aus der Pilotstudie in Erlangen, in der der Erlangen Index bzgl. des funktionellen Outcome nach 180 Tagen die größte Korrelation in der Untergruppe der Patienten nach Nephrektomie zeigte.
Der Index erwies sich als schnell durchführbares Assessment, das wenig Personal erfordert. Es ist weiter zu prüfen, ob sich durch Anwendung dieses Assessment tatsächlich Änderungen im klinischen Therapieregime ergeben bzw. ob sich die Modifizierungen der Therapie auch in einem verbesserten Outcome der Patienten auswirken.
Der kathetergestützte Aortenklappenersatz nimmt auch bei Patienten mit niedrigem OP-Risiko einen zunehmend größeren Stellenwert zur Behandlung der hochgradigen Aortenklappenstenose ein.45 Umso wichtiger ist es, die einzelnen Schritte der Intervention zu optimieren. In einigen Arbeiten wurde bereits die Vordilatation als obsolet bezeichnet, da sie lediglich die OP-Zeit verlängere und Komplikationen wie Schlaganfälle und AV-Blockierungen begünstige.22,52,53,57,59 Ziel dieser Studie war es, die Vor- und Nachteile der Vordilatation zu untersuchen. Hierzu wurden 625 Patienten, die im Zeitraum von 2016-2020 eine TAVI am UKW erhielten, retrospektiv analysiert (323 mit, 302 ohne Vordilatation). Es wurden demographische sowie prä-, peri- und post-interventionelle Daten analysiert. Statistisch signifikante Unterschiede wurden bei den Schlaganfällen beobachtet (p=0,01), die mit 2,2% lediglich bei Patienten mit Vordilatation auftraten, sodass bei einem hohen Schlaganfallrisiko hierauf verzichtet werden sollte. Zusätzlich war in der Gruppe mit Vordilatation die passagere Schrittmacherabhängigkeit signifikant häufiger (p=0,01). Alle anderen Komplikationen waren nicht signifikant. In beiden Gruppen zeigte sich zu >95% ein Device-Success, sodass der Verzicht auf eine Prädilatation nicht mit einem schlechteren Outcome assoziiert und somit sicher ist.53,57,58,59,61
Die Auswertung der TTE-Daten zeigte, dass eine Prädilatation durchgeführt wurde, wenn die Klappe signifikant höhergradig stenosiert war (Pmean 50,17 vs. 46,79mmHG). Ferner wurde bei leichtgradigen Aortenklappeninsuffizienzen signifikant häufiger auf eine Vordilatation verzichtet (p=0,04). Eine Vordilatation kann also bei komplexeren anatomischen Verhältnissen sinnvoll sein, um einen optimalen Klappensitz zu gewährleisten.52,53 Nach TAVI zeigte sich die LV-EF in der Gruppe mit Prädilatation signifikant höher (p=0,002). Höhergradige Aortenklappeninsuffizienzen scheinen nicht durch eine Vordilatation begünstigt zu sein, die AI°II wurde nur bei 4 Patienten ohne Vordilatation beobachtet. In den postinterventionellen EKG-Daten zeigten sich in der Gruppe ohne Vordilatation signifikant häufiger Linksschenkelblöcke sowie ein AVB °II, Typ II, was vermutlich durch die fehlende Vorbereitung der Klappe und den damit assoziierten ungünstigeren Prothesensitz zu erklären ist.53 Die Nachdilatation wurde nicht durch eine vorausgegangene Vordilatation beeinflusst. Bezüglich der implantierten Klappenarten wurde die S3 Ultra signifikant häufiger bei Patienten ohne Vordilatation eingesetzt. Die in vielen Arbeiten beschriebene kürzere OP-Dauer ließ sich in dieser Studie nicht bestätigen.52,53,56 Stattdessen war bei TAVIs ohne Vordilatation die Eingriffsdauer im Schnitt 4min länger (p=0,11). Es bestätigte sich, dass bei einer Prädilatation signifikant mehr Kontrastmittel verwendet wurde (p=0,001) und die Strahlenbelastung höher war. Dies ist insbesondere für Patienten mit einer Niereninsuffizienz von Bedeutung.42 Ob eine Vordilatation durchgeführt wird, sollte also individuell aufgrund der Begleiterkrankungen und Risikofaktoren entschieden werden.
Die vorliegende Arbeit widmet sich den Reaktionsmöglichkeiten, welche die Rechtsordnung der Europäischen Union ihren Organen zur Sicherung der in Artikel 2 EUV kodifizierten Werte zur Verfügung stellt. Die Europäische Union wird hierbei in ihrer Eigenschaft als Wertegemeinschaft, die sich insbesondere auf demokratischen, rechtsstaatlichen und menschenrechtlichen Zielen und Vorstellungen gründet, beleuchtet. Neben der Analyse der Werteklausel nach Artikel 2 EUV setzt sich die Dissertation im Kern sowohl mit den präventiven als auch repressiven Instrumenten des unionalen Primär- und Sekundärrechts zur Sicherung des Wertekanons auseinander. Im Wege eines systematischen Vergleichs erfolgt abschließend eine Bewertung der verschiedenen Handlungsmechanismen.
Eine Dysbalance zwischen regulatorischen und proinflammatorischen T-Helferzellen kann zu Autoimmunerkrankungen führen. In dieser methodischen Arbeit wurde die Polarisierbarkeit von peripheren T-Lymphozyten durch verschiedene Zytokin-Stimuli untersucht. Hauptziel war es, CD4+CD25-CD127- Lymphozyten durch Stimulation mit einem IL-2 und TGFβ-beinhaltenden Zytokin-Cocktail (Treg-Cocktail) zu iTregs zu polarisieren und deren Suppressionsfunktion auf autologe Effektor-Leukozyten zu untersuchen.
Es erfolgte eine Phänotypisierung der PBMCs gesunder Probanden, insbesondere im Hinblick auf die Verteilung der T-Lymphozyten-Subpopulationen, deren Zytokinproduktion und FoxP3-Expression. Zudem wurden aus den PBMCs der Probanden Tregs (CD4+CD25+CD127low/-) sowie CD4+CD25-CD127- Zellen isoliert und deren Funktionsfähigkeit durch die Untersuchung ihrer Suppressionsfunktion auf autologe Effektor-Lymphozyten analysiert. Die Zellen wurden mittels verschiedener Zytokin-Cocktails in Richtung Treg sowie in Richtung Th17-Zellen polarisiert; anschließend wurde die Funktionsfähigkeit der polarisierten Zellen in Suppression-Assays gemessen.
Wir konnten zeigen, dass die CD4+CD25+CD127low/- Zellen Tregs mit der Fähigkeit zur Suppression der Proliferation autologer Effektor-Lymphozyten waren. Bei den CD4+CD25-CD127-Zellen handelte es sich um T-Lymphozyten ohne Suppressionsfunktion. Nach Stimulation der CD4+CD25-CD127-Zellen mit dem Treg-Cocktail zeigten die Zellen eine mit den Tregs vergleichbare Suppressionsfunktion.
Mit dieser Studie haben wir eine aktuelle methodische Quelle für die Untersuchung von Phänotyp und Funktion regulatorischer T-Zellen sowie für die Stimulation peripherer T-Lymphozyten hin zu Tregs geschaffen, die als Basis für Folgeversuche dienen soll, in denen Zellen von Patienten mit Autoimmunkrankheiten untersucht werden sollen. Da sich die Inflammation bei Autoimmunerkrankungen insbesondere in den betroffenen Geweben abspielt, wäre eine Studie anzustreben, in der aus dem Blut isolierte T-Lymphozyten den Zellen aus den entzündeten Geweben gegenübergestellt werden. Ergänzend sollte eine Phänotypisierung der Tregs und der CD4+CD25-CD127- Zellen nach der Zytokin-Stimulation erfolgen.
Zusammenfassend konnte die Plastizität peripherer T-Lymphozyten in Richtung Treg gezeigt werden. Besonders hervorzuheben ist die bislang wenig untersuchte Zellpopulation der CD4+CD25-CD127- Zellen, die eine vielversprechende Zellpopulation für die in vitro Induktion von Tregs darstellt.
Das frühzeitige Erkennen psychoonkologischer Belastungen ist Bestandteil des optimalen therapeutischen Managements von Tumorpatienten. Nur wenige, widersprüchliche Studien untersuchten bisher das psychische Befinden im Verlauf einer PET/CT. Bezogen auf das Prostatakarzinom gibt es bislang keine spezifische Studie, obwohl es die häufigste onkologische Erkrankung des Mannes darstellt. Aufgrund der insgesamt guten Prognose wird von einer geringeren psychischen Belastung ausgegangen. Mithilfe dieser Studie sollte durch Kombination etablierter Fragebögen das psychische Befinden im Verlauf der PET/CT explorativ untersucht werden.
Von Oktober 2018 bis Februar 2020 wurde 531 männlichen Patienten der Nuklearmedizin des Universitätsklinikums Würzburg die Teilnahme angeboten. N = 85 Patienten (n = 38 Patienten mit Prostatakarzinom sowie n = 47 Patienten mit anderen malignen Erkrankungen) stimmten einer vollständigen Teilnahme zu. Es wurden zwei Messzeitpunkte (T1 nach Durchführung der PET/CT; T2 nach Ergebnismitteilung) festgelegt. Als Messinstrumente wurden der PA-F-KF, QUICC, DT, STAI-X1, PANAS und ein Selbsteinschätzungsbogen verwendet.
24 % (T1) bzw. 35 % (T2) der Patienten mit Prostatakarzinom gaben eine dysfunktionale Progredienzangst an, 55 % (T1+T2) eine pathologische psychische Belastung. 53 % (T1) bzw. 50 % (T2) der Patienten zeigten eine relevant erhöhte Zustandsangst.
Die Progredienzangst stieg nach Ergebnismitteilung an (p = 0,048; η² = 0,106), die Ungewissheit über den Stand der Erkrankung (p = 0,014; η² = 0,165) und Bewältigbarkeit des Alltags (p = 0,016; η² = 0,163) reduzierten sich. Allgemeine Ängste wie die Zustandsangst, der Distress und negative Affekte veränderten sich nicht. PSA-Werte ohne bildmorphologisches Korrelat lösten eine größere Unsicherheit bezüglich des aktuellen Krankheitszustandes aus (p = 0,029; η² = 0,128). Jüngere Patienten zeigten vor (p = 0,005; η² = 0,207) und nach (p = 0,001; η² = 0,290) Ergebnismitteilung eine höhere Angst um ihre Berufstätigkeit und gaben eine geringere Erleichterung nach Ergebnismitteilung (p = 0,016; η² = 0,165) an.
Als Limitationen sind die geringe Fallzahl und Teilnahmequote, multiple Testung und fehlende Erfragung psychischer Erkrankungen zu beachten.
Insgesamt zeigen sich eine hohe psychische Belastung und Ängste im Verlauf der PET/CT. Patienten mit Prostatakarzinom sind zu diesem Zeitpunkt nicht weniger belastet als Patienten mit anderen malignen Erkrankungen.
Störungen der Ionen- und Blutgas Homöostase mit Verschiebungen von Na+ und K+ in der regionalen Hypoxie sind ein Kennzeichen der experimentellen zerebralen Ischämie, wurden aber in ihrer Bedeutung für Schlaganfallpatienten noch nicht hinreichend untersucht. Wir berichten über eine prospektive, humane Querschnittsstudie an 366 Schlaganfallpatienten, die mit einer endovaskulären Rekanalisation bei einem akuten LVO der vorderen Zirkulation zwischen dem 18.Dezember 2018 und dem 31.August 2020 behandelt wurden. Im Rahmen der vorliegenden Dissertationsarbeit wurden intraprozedural arterielle Blutgasproben (1ml) aus dem lokal ischämischen Kollateralkreislauf und der intraindividuellen systemischen Referenzlokalisation in 51 Patienten gewonnen. Die Probengewinnung mit Hilfe eines Mikrokatheters erfolgte nach einem bereits veröffentlichten Protokoll.
Diese Arbeit weist in der Perakutphase eines Großgefäßverschlusses signifikant nach, dass der lokal ischämische paO2 (-4,29%, paO2ischämisch=185,3 mmHg vs. paO2systemisch=193,6mmHg; p=0,035) und die Konzentration von K+ (-5,49%, K+ischämisch=3,44mmol/L vs. K+systemisch=3,64mmol/L; p=0,0081) signifikant reduziert war. Wir beobachteten, dass der Na+:K+-Quotient in der Kollateralzirkulation (+3,29%; Na+:K+-Quotientischämisch=41,74 vs. Na+:K+-Quotientsystemisch=40,38; p=0,0048) im Vergleich zur systemischen Zirkulation signifikant erhöht war, während die Na+-Konzentration signifikant positiv mit einer Zunahme des Infarktausmaßes assoziiert war (r=0,42, p=0,0033). Wir fanden eine alkaline Tendenz des zerebralen pH (+0,14%, pHischämisch=7,38 vs. pHsystemisch=7,37, p=0,0019), mit einer zeitabhängigen Verschiebung in den azidotischen Bereich (r=-0,36, p=0,0549).
Schlussfolgernd deuten unsere Ergebnisse darauf hin, dass die durch den Schlaganfall verursachten Veränderungen der zerebralen Sauerstoffversorgung, der Ionenzusammensetzung und des Säure-Basen-Gleichgewichts dynamisch auftreten, während der okklusiven Ischämie fortschreiten und mit der akuten Gewebeschädigung im Zusammenhang stehen. Wünschenswert sind weitere prospektive Studien, um die Ergebnisse valide zu reproduzieren.
Background and Objective: Staphylococcus aureus is one of the major pathogens of nosocomial infections as wells as community-acquired (CA) infections worldwide. So far, large-scale comprehensive molecular and epidemiological characterisation of S. aureus from very diverse settings has not been carried out in India. The objective of this study is to evaluate the molecular, epidemiological and virulence characteristics of S. aureus in both community and hospital settings in Chennai, southern India. Methods: S. aureus isolates were obtained from four different groups (a) healthy individuals from closed community settings, (b) inpatients from hospitals, (c) outpatients from hospitals, representing isolates of hospital-community interface and (d) HIV-infected patients to define isolates associated with the immunocompromised. Antibiotic susceptibility testing, multiplex polymerase chain reactions for detection of virulence and resistance determinants, molecular typing including Staphylococcal cassette chromosome mec (SCCmec) and agr typing, were carried out. Sequencing-based typing was done using spa and multilocus sequence typing (MLST) methods. Clonal complexes (CC) of hospital and CA methicillin-resistant S. aureus (MRSA) were identified and compared for virulence and resistance.
Results and Conclusion: A total of 769 isolates of S. aureus isolates were studied. The prevalence of MRSA was found to be 7.17%, 81.67%, 58.33% and 22.85% for groups a, b, c and d, respectively. Of the four SCCmec types (I, III, IV and V) detected, SCCmec V was found to be predominant. Panton-Valentine leucocidin toxin genes were detected among MRSA isolates harbouring SCCmec IV and V. A total of 78 spa types were detected, t657 being the most prevalent. 13 MLST types belonging to 9 CC were detected. CC1 (ST-772, ST-1) and CC8 (ST238, ST368 and ST1208) were found to be predominant among MRSA. CA-MRSA isolates with SCCmec IV and V were isolated from all study groups including hospitalised patients and were found to be similar by molecular tools. This shows that CA MRSA has probably infiltrated into the hospital settings.
Nearly a quarter of the Alpine area is covered by a dense network of large protected areas (LPAs) of the four categories national park(NP), biosphere reserve (BR), nature park and world natural heritage site (WNHS). From the time of early industrialization, the Alpine area has undergone a mixed and increasingly polarized demographic development between the poles of immigration and emigration. This article investigates the possible mutual impact of population development and the existence of LPAs. The research design includes a quantitative survey of all Alpine LPAs in terms of their population development and the structure of immigration in the first decade of the 21st century. This will be linked with qualitative expert interviews in four selected NPs. The overall results allow an interpretation of the statistical
correlations between type of LPA and migration.
Klenke, Daniela ; Quast, Anja ; Prelog, Martina ; Holl-Wieden, Annette ; Riekert, Maximilian ; Stellzig-Eisenhauer, Angelika ; Meyer-Marcotty, Philipp
Background
Juvenile idiopathic arthritis (JIA) is often accompanied by pathomorphological changes to the temporomandibular joint (TMJ). By analyzing orthodontical orthopantomograms of JIA patients the aims of the study were a) classification of condyle changes, b) quantification of bony asymmetries of condylar destruction and c) detection of relationships between disease duration and TMJ-involvement.
Patients/Methods
46 caucasian JIA-patients (28 female; 18 male; < 16.0 years) were enrolled, each joint (n = 92) was morphologically assessed by means of orthopantomogram, quantitatively analysed and compared with duration of general disease. Condyle morphology was assessed using the Billiau scale for severity of destruction [1]. The quantitative analysis was based on ratios of condyle, ramus and mandible height.
Results
Patients were divided into groups (Group I – slightly affected, n = 36; Billiau severity 0–2; condyle findings: X-ray normal, condyle erosions, condylar flattening; Group II – severely affected, N = 10; Billiau severity 3–4; condyle findings: condylar flattenings and erosions, unilateral/bilateral complete loss of condyles), based on morphological analysis of condylar destruction. Duration of disease was significantly longer in Group II (8.9 ± 5.2 years) than in Group I (4.6 ± 4.7 years). Asymmetries of condyle, ramus and mandible height, quantitatively analysed by contralateral comparison, were significantly more marked in patients of Group II than of Group I.
Conclusions
Orthopantomogram imaging can be used in orthodontics clinical routine to detect TMJ-pathologies and is an important reference for monitoring progression of JIA. Classification into severe and slightly affected TMJ is possible by analysis of condylar pathomorphology. An association between degree of destruction, extent of lower jaw asymmetry and disease duration is suggested by the results.
Coelho, Luis Pedro ; Alves, Renato ; Monteiro, Paulo ; Huerta-Cepas, Jaime ; Freitas, Ana Teresa ; Bork, Peer
Background
Shotgun metagenomes contain a sample of all the genomic material in an environment, allowing for the characterization of a microbial community. In order to understand these communities, bioinformatics methods are crucial. A common first step in processing metagenomes is to compute abundance estimates of different taxonomic or functional groups from the raw sequencing data.
Given the breadth of the field, computational solutions need to be flexible and extensible, enabling the combination of different tools into a larger pipeline.
Results
We present NGLess and NG-meta-profiler. NGLess is a domain specific language for describing next-generation sequence processing pipelines. It was developed with the goal of enabling user-friendly computational reproducibility. It provides built-in support for many common operations on sequencing data and is extensible with external tools with configuration files.
Using this framework, we developed NG-meta-profiler, a fast profiler for metagenomes which performs sequence preprocessing, mapping to bundled databases, filtering of the mapping results, and profiling (taxonomic and functional). It is significantly faster than either MOCAT2 or htseq-count and (as it builds on NGLess) its results are perfectly reproducible.
Conclusions
NG-meta-profiler is a high-performance solution for metagenomics processing built on NGLess. It can be used as-is to execute standard analyses or serve as the starting point for customization in a perfectly reproducible fashion.
NGLess and NG-meta-profiler are open source software (under the liberal MIT license) and can be downloaded from https://ngless.embl.de or installed through bioconda.
Semler, Elisa ; Anderl-Straub, Sarah ; Uttner, Ingo ; Diehl-Schmid, Janine ; Danek, Adrian ; Einsiedler, Beate ; Fassbender, Klaus ; Fliessbach, Klaus ; Huppertz, Hans-Jürgen ; Jahn, Holger ; Kornhuber, Johannes ; Landwehrmeyer, Bernhard ; Lauer, Martin ; Muche, Rainer ; Prudlo, Johannes ; Schneider, Anja ; Schroeter, Matthias L. ; Ludolph, Albert C. ; Otto, Markus
Background
With upcoming therapeutic interventions for patients with primary progressive aphasia (PPA), instruments for the follow-up of patients are needed to describe disease progression and to evaluate potential therapeutic effects. So far, volumetric brain changes have been proposed as clinical endpoints in the literature, but cognitive scores are still lacking. This study followed disease progression predominantly in language-based performance within 1 year and defined a PPA sum score which can be used in therapeutic interventions.
Methods
We assessed 28 patients with nonfluent variant PPA, 17 with semantic variant PPA, 13 with logopenic variant PPA, and 28 healthy controls in detail for 1 year. The most informative neuropsychological assessments were combined to a sum score, and associations between brain atrophy were investigated followed by a sample size calculation for clinical trials.
Results
Significant absolute changes up to 20% in cognitive tests were found after 1 year. Semantic and phonemic word fluency, Boston Naming Test, Digit Span, Token Test, AAT Written language, and Cookie Test were identified as the best markers for disease progression. These tasks provide the basis of a new PPA sum score. Assuming a therapeutic effect of 50% reduction in cognitive decline for sample size calculations, a number of 56 cases is needed to find a significant treatment effect. Correlations between cognitive decline and atrophy showed a correlation up to r = 0.7 between the sum score and frontal structures, namely the superior and inferior frontal gyrus, as well as with left-sided subcortical structures.
Conclusion
Our findings support the high performance of the proposed sum score in the follow-up of PPA and recommend it as an outcome measure in intervention studies.
Andratschke, N. ; Alheid, H. ; Allgäuer, M. ; Becker, G. ; Blanck, O. ; Boda-Heggemann, J. ; Brunner, T. ; Duma, M. ; Gerum, S. ; Guckenberger, M. ; Hildebrandt, G. ; Klement, R. J. ; Lewitzki, V. ; Ostheimer, C. ; Papachristofilou, A. ; Petersen, C. ; Schneider, T. ; Semrau, R. ; Wachter, S. ; Habermehl, D.
Background
The intent of this pooled analysis as part of the German society for radiation oncology (DEGRO) stereotactic body radiotherapy (SBRT) initiative was to analyze the patterns of care of SBRT for liver oligometastases and to derive factors influencing treated metastases control and overall survival in a large patient cohort.
Methods
From 17 German and Swiss centers, data on all patients treated for liver oligometastases with SBRT since its introduction in 1997 has been collected and entered into a centralized database. In addition to patient and tumor characteristics, data on immobilization, image guidance and motion management as well as dose prescription and fractionation has been gathered. Besides dose response and survival statistics, time trends of the aforementioned variables have been investigated.
Results
In total, 474 patients with 623 liver oligometastases (median 1 lesion/patient; range 1–4) have been collected from 1997 until 2015. Predominant histologies were colorectal cancer (n = 213 pts.; 300 lesions) and breast cancer (n = 57; 81 lesions). All centers employed an SBRT specific setup. Initially, stereotactic coordinates and CT simulation were used for treatment set-up (55%), but eventually were replaced by CBCT guidance (28%) or more recently robotic tracking (17%). High variance in fraction (fx) number (median 1 fx; range 1–13) and dose per fraction (median: 18.5 Gy; range 3–37.5 Gy) was observed, although median BED remained consistently high after an initial learning curve. Median follow-up time was 15 months; median overall survival after SBRT was 24 months. One- and 2-year treated metastases control rate of treated lesions was 77% and 64%; if maximum isocenter biological equivalent dose (BED) was greater than 150 Gy EQD2Gy, it increased to 83% and 70%, respectively. Besides radiation dose colorectal and breast histology and motion management methods were associated with improved treated metastases control.
Conclusion
After an initial learning curve with regards to total cumulative doses, consistently high biologically effective doses have been employed translating into high local tumor control at 1 and 2 years. The true impact of histology and motion management method on treated metastases control deserve deeper analysis. Overall survival is mainly influenced by histology and metastatic tumor burden.
π-Conjugated organic polymers have attracted tremendous attention in the last decades, and the interest in these materials is mainly driven by their applicability in next-generation electronic and optoelectronic devices (OLEDs, OFETs, photovoltaics). The partial or complete replacement of carbon atoms by main group elements in conjugated polymers can significantly change the characteristics and applications of these macromolecules. In this work, a class of inorganic polymers comprising a backbone of exclusively boron and nitrogen atoms (poly(iminoborane)s, PIBs) and their monodisperse oligomers is described. In addition, novel inorganic–organic hybrid polymers containing BN units in their polymer backbone were synthesized and characterized.
In chapter 2.1, the development of catalytic B–N coupling routes for the controlled synthesis of macromolecular materials is described. While the reaction of an N-silyl-B-chloro-aminoborane with the electrophilic reagent trimethylsilyl triflate led to effective B–N coupling, the reaction with a silver(I) salt resulted in an intramolecular Cl/Me exchange between the boron and silicon centers.
In chapter 2.2-2.4, the study of oligo- and poly(iminoborane)s is discussed. Monodisperse and cyclolinear oligo(iminoborane)s based on diazaborolidines with up to 7 boron and 8 nitrogen atoms were synthesized by successively extending the B-N main chain. However, the use of benzodiazaborolines only led to limited BN catenation. Furthermore, the redistribution processes resulting from the reaction of longer oligomers with non-stoichiometric amounts of (di)halogenated boranes is reported.
In chapter 2.5-2.6, the synthesis of 1,2,5-azadiborolanes as building blocks for the synthesis of poly(iminoborane)s and inorganic-organic hybrid polymers is described. While the attempt to apply an azadiborolane with sterically demanding groups on the boron-bridging ethylene unit for the construction of PIB was unfeasible, it was successfully incorporated in inorganic-organic hybrid polymers. Photophysical studies indicated π-conjugation along the polymer chain. A first attempt to synthesize PIBs based on azadiborolanes with unsubstituted ethylene units showed promising results.
In chapter 2.7-2.8, a comprehensive study of poly(arylene iminoborane)s, which are BN analogs of poly(arylene vinylene)s is described, and the properties of four polymers as well as twelve monodisperse oligomers were investigated. Photophysical investigations of the monomers, dimers and polymers showed a systematic bathochromic shift of the absorption maximum with increasing chain length and thiophene content. Based on TD-DFT calculations of the model oligomers, the lowest-energy absorption band could be assigned to HOMO to LUMO transitions with π-π* character. The oligo- and poly(arylene iminoborane)s showed only very weak to no emission in solution but they were emissive in the solid state. For four oligomers the aggregation induced emission (AIE) in a THF/water mixture was investigated and DLS studies confirmed the formation of nanoaggregates.
In chapter 2.9, oligo- and polymerizations of sulfur-containing building blocks and subsequent pH-triggered degradation of the products is described. While a sulfilimine-containing oligomer could not be isolated, the sulfone-, sulfoximine-, and sulfoxide-containing molecular oligomers and polymers could be successfully synthesized by B=N or B–O bond formation reactions. The sulfur-containing building blocks were successfully released under acidic or basic conditions, which was confirmed by NMR spectroscopy and mass spectrometry.
Breuer, René ; Mattheisen, Manuel ; Frank, Josef ; Krumm, Bertram ; Treutlein, Jens ; Kassem, Layla ; Strohmaier, Jana ; Herms, Stefan ; Mühleisen, Thomas W. ; Degenhardt, Franziska ; Cichon, Sven ; Nöthen, Markus M. ; Karypis, George ; Kelsoe, John ; Greenwood, Tiffany ; Nievergelt, Caroline ; Shilling, Paul ; Shekhtman, Tatyana ; Edenberg, Howard ; Craig, David ; Szelinger, Szabolcs ; Nurnberger, John ; Gershon, Elliot ; Alliey-Rodriguez, Ney ; Zandi, Peter ; Goes, Fernando ; Schork, Nicholas ; Smith, Erin ; Koller, Daniel ; Zhang, Peng ; Badner, Judith ; Berrettini, Wade ; Bloss, Cinnamon ; Byerley, William ; Coryell, William ; Foroud, Tatiana ; Guo, Yirin ; Hipolito, Maria ; Keating, Brendan ; Lawson, William ; Liu, Chunyu ; Mahon, Pamela ; McInnis, Melvin ; Murray, Sarah ; Nwulia, Evaristus ; Potash, James ; Rice, John ; Scheftner, William ; Zöllner, Sebastian ; McMahon, Francis J. ; Rietschel, Marcella ; Schulze, Thomas G.
Background
Disentangling the etiology of common, complex diseases is a major challenge in genetic research. For bipolar disorder (BD), several genome-wide association studies (GWAS) have been performed. Similar to other complex disorders, major breakthroughs in explaining the high heritability of BD through GWAS have remained elusive. To overcome this dilemma, genetic research into BD, has embraced a variety of strategies such as the formation of large consortia to increase sample size and sequencing approaches. Here we advocate a complementary approach making use of already existing GWAS data: a novel data mining procedure to identify yet undetected genotype–phenotype relationships. We adapted association rule mining, a data mining technique traditionally used in retail market research, to identify frequent and characteristic genotype patterns showing strong associations to phenotype clusters. We applied this strategy to three independent GWAS datasets from 2835 phenotypically characterized patients with BD. In a discovery step, 20,882 candidate association rules were extracted.
Results
Two of these rules—one associated with eating disorder and the other with anxiety—remained significant in an independent dataset after robust correction for multiple testing. Both showed considerable effect sizes (odds ratio ~ 3.4 and 3.0, respectively) and support previously reported molecular biological findings.
Conclusion
Our approach detected novel specific genotype–phenotype relationships in BD that were missed by standard analyses like GWAS. While we developed and applied our method within the context of BD gene discovery, it may facilitate identifying highly specific genotype–phenotype relationships in subsets of genome-wide data sets of other complex phenotype with similar epidemiological properties and challenges to gene discovery efforts.
Coelho, Luis Pedro ; Kultima, Jens Roat ; Costea, Paul Igor ; Fournier, Coralie ; Pan, Yuanlong ; Czarnecki-Maulden, Gail ; Hayward, Matthew Robert ; Forslund, Sofia K. ; Schmidt, Thomas Sebastian Benedikt ; Descombes, Patrick ; Jackson, Janet R. ; Li, Qinghong ; Bork, Peer
Background
Gut microbes influence their hosts in many ways, in particular by modulating the impact of diet. These effects have been studied most extensively in humans and mice. In this work, we used whole genome metagenomics to investigate the relationship between the gut metagenomes of dogs, humans, mice, and pigs.
Results
We present a dog gut microbiome gene catalog containing 1,247,405 genes (based on 129 metagenomes and a total of 1.9 terabasepairs of sequencing data). Based on this catalog and taxonomic abundance profiling, we show that the dog microbiome is closer to the human microbiome than the microbiome of either pigs or mice. To investigate this similarity in terms of response to dietary changes, we report on a randomized intervention with two diets (high-protein/low-carbohydrate vs. lower protein/higher carbohydrate). We show that diet has a large and reproducible effect on the dog microbiome, independent of breed or sex. Moreover, the responses were in agreement with those observed in previous human studies.
Conclusions
We conclude that findings in dogs may be predictive of human microbiome results. In particular, a novel finding is that overweight or obese dogs experience larger compositional shifts than lean dogs in response to a high-protein diet.
de Nijs, Laurence ; Choe, Kyonghwan ; Steinbusch, Hellen ; Schijns, Olaf E. M. G. ; Dings, Jim ; van den Hove, Daniel L. A. ; Rutten, Bart P. F. ; Hoogland, Govert
Background
Temporal lobe epilepsy (TLE) with hippocampal sclerosis (HS) is a common pharmaco-resistant epilepsy referred for adult epilepsy surgery. Though associated with prolonged febrile seizures (FS) in childhood, the neurobiological basis for this relationship is not fully understood and currently no preventive or curative therapies are available. DNA methylation, an epigenetic mechanism catalyzed by DNA methyltransferases (DNMTs), potentially plays a pivotal role in epileptogenesis associated with FS. In an attempt to start exploring this notion, the present cross-sectional pilot study investigated whether global DNA methylation levels (5-mC and 5-hmC markers) and DNMT isoforms (DNMT1, DNMT3a1, and DNMT3a2) expression would be different in hippocampal and neocortical tissues between controls and TLE patients with or without a history of FS.
Results
We found that global DNA methylation levels and DNMT3a2 isoform expression were lower in the hippocampus for all TLE groups when compared to control patients, with a more significant decrease amongst the TLE groups with a history of FS. Interestingly, we showed that DNMT3a1 expression was severely diminished in the hippocampus of TLE patients with a history of FS in comparison with control and other TLE groups. In the neocortex, we found a higher expression of DNMT1 and DNMT3a1 as well as increased levels of global DNA methylation for all TLE patients compared to controls.
Conclusion
Together, the findings of this descriptive cross-sectional pilot study demonstrated brain region-specific changes in DNMT1 and DNMT3a isoform expression as well as global DNA methylation levels in human TLE with or without a history of FS. They highlighted a specific implication of DNMT3a isoforms in TLE after FS. Therefore, longitudinal studies that aim at targeting DNMT3a isoforms to evaluate the potential causal relationship between FS and TLE or treatment of FS-induced epileptogenesis seem warranted.
Introduction.
Mobile health (mHealth) integrates mobile devices into healthcare, enabling remote monitoring, data collection, and personalized interventions. Machine Learning (ML), a subfield of Artificial Intelligence (AI), can use mHealth data to confirm or extend domain knowledge by finding associations within the data, i.e., with the goal of improving healthcare decisions. In this work, two data collection techniques were used for mHealth data fed into ML systems: Mobile Crowdsensing (MCS), which is a collaborative data gathering approach, and Ecological Momentary Assessments (EMA), which capture real-time individual experiences within the individual’s common environments using questionnaires and sensors. We collected EMA and MCS data on tinnitus and COVID-19. About 15 % of the world’s population suffers from tinnitus.
Materials & Methods.
This thesis investigates the challenges of ML systems when using MCS and EMA data. It asks: How can ML confirm or broad domain knowledge? Domain knowledge refers to expertise and understanding in a specific field, gained through experience and education. Are ML systems always superior to simple heuristics and if yes, how can one reach explainable AI (XAI) in the presence of mHealth data? An XAI method enables a human to understand why a model makes certain predictions. Finally, which guidelines can be beneficial for the use of ML within the mHealth domain? In tinnitus research, ML discerns gender, temperature, and season-related variations among patients. In the realm of COVID-19, we collaboratively designed a COVID-19 check app for public education, incorporating EMA data to offer informative feedback on COVID-19-related matters. This thesis uses seven EMA datasets with more than 250,000 assessments. Our analyses revealed a set of challenges: App user over-representation, time gaps, identity ambiguity, and operating system specific rounding errors, among others. Our systematic review of 450 medical studies assessed prior utilization of XAI methods.
Results.
ML models predict gender and tinnitus perception, validating gender-linked tinnitus disparities. Using season and temperature to predict tinnitus shows the association of these variables with tinnitus. Multiple assessments of one app user can constitute a group. Neglecting these groups in data sets leads to model overfitting. In select instances, heuristics outperform ML models, highlighting the need for domain expert consultation to unveil hidden groups or find simple heuristics.
Conclusion.
This thesis suggests guidelines for mHealth related data analyses and improves estimates for ML performance. Close communication with medical domain experts to identify latent user subsets and incremental benefits of ML is essential.
Ziel der vorliegenden Studie war es, verschiedene kommerzielle Anbieter für KI-gestützte FRS-Analysen hinsichtlich ihrer Genauigkeit mit einem menschlichen Goldstandard zu vergleichen.
Auf 50 FRS wurden durch zwölf erfahrene Untersucher 15 Landmarken identifiziert, auf deren Basis neun relevante Parameter vermessen wurden. Der Medianwert dieser zwölf Auswertungen wurde für jeden Parameter auf jedem FRS als Goldstandard definiert und als Referenz für die Vergleiche mit vier verschiedenen kommerziellen KI-Anbietern (DentaliQ.ortho, WebCeph, AudaxCeph, CephX) festgelegt. Die statistische Auswertung erfolgte mittels ANOVA mit Messwiederholung, paarweiser Vergleiche mittels Post-hoc-Test und Bland-Altman-Plots.
DentaliQ.ortho zeigte für alle neun untersuchten Parameter keinen statistisch signifikanten Unterschied zum menschlichen Goldstandard und es konnte insgesamt von einer hohen Genauigkeit der Auswertungen ausgegangen werden. Auch für WebCeph war kein statistisch signifikanter Unterschied zum menschlichen Goldstandard zu verzeichnen. Allerdings war die Präzision im Vergleich zu den anderen Anbietern für alle Parameter am geringsten und der proportionale Fehler bei nahezu allen Parametern am höchsten. AudaxCeph wies für sieben Parameter statistisch signifikante Unterschiede zum menschlichen Goldstandard auf. Für CephX wurden für fünf Parameter statistisch signifikante Unterschiede zum menschlichen Goldstandard ermittelt. Insbesondere für die dentale Analyse war für alle untersuchten kommerziellen KI-Anbieter eine vergleichsweise niedrigere Genauigkeit zu verzeichnen.
Die Ergebnisse zeigen, dass noch deutliche Qualitätsunterschiede zwischen den kommerziellen KI-Anbietern für die vollständig automatisierte FRS-Analyse bestehen. Vor dem Hintergrund der Zeitersparnis und Qualitätssicherung sind KI zwar vielversprechend, sollten aber zum aktuellen Zeitpunkt nur unter Aufsicht durch menschliche Experten zum Einsatz kommen.
We develop a joint formalism and numerical framework for analyzing the superconducting instability of metals from a weak coupling perspective. This encompasses the Kohn–Luttinger formulation of weak coupling renormalization group for superconductivity as well as the random phase approximation imposed on the diagrammatic expansion of the two-particle Green’s function. The central quantity to resolve is the effective interaction in the Cooper channel, for which we develop an optimized numerical framework. Our code is capable of treating generic multi-orbital models in two as well as three spatial dimensions and, in particular, arbitrary avenues of spin-orbit coupling.
For a connected real Lie group G we consider the canonical standard-ordered star product arising from the canonical global symbol calculus based on the half-commutator connection of G. This star product trivially converges on polynomial functions on T\(^*\)G thanks to its homogeneity. We define a nuclear Fréchet algebra of certain analytic functions on T\(^*\)G, for which the standard-ordered star product is shown to be a well-defined continuous multiplication, depending holomorphically on the deformation parameter \(\hbar\). This nuclear Fréchet algebra is realized as the completed (projective) tensor product of a nuclear Fréchet algebra of entire functions on G with an appropriate nuclear Fréchet algebra of functions on \({\mathfrak {g}}^*\). The passage to the Weyl-ordered star product, i.e. the Gutt star product on T\(^*\)G, is shown to preserve this function space, yielding the continuity of the Gutt star product with holomorphic dependence on \(\hbar\).
Let (ϕ\(_t\))\(_{t≥0}\) be a semigroup of holomorphic functions in the unit disk \(\mathbb {D}\) and K a compact subset of \(\mathbb {D}\). We investigate the conditions under which the backward orbit of K under the semigroup exists. Subsequently, the geometric characteristics, as well as, potential theoretic quantities for the backward orbit of K are examined. More specifically, results are obtained concerning the asymptotic behavior of its hyperbolic area and diameter, the harmonic measure and the capacity of the condenser that K forms with the unit disk.
Es erfolgte eine Evaluierung von Bestrahlungsdaten aus der Strahlentherapie der Universitätsklinik Würzburg von 435 Patienten mit biochemischen oder klinischen Rezidiv des Prostatakarzinoms. Der primäre Endpunkt war das biochemisch rezidivfreie Überleben. Sekundäre Endpunkte waren das Auftreten von Fernmetastasen und das Versterben der Patienten. Zudem wurde der Einfluss patienten-, tumor-, und behandlungsspezifischer Faktoren überprüft.
In this article, I argue for four theses. First, libertarian and compatibilist accounts of moral responsibility agree that the capability of practical reason is the central feature of moral responsibility. Second, this viewpoint leads to a reasons-focused account of human behavior. Examples of human action discussed in debates about moral responsibility suggest that typical human actions are driven primarily by the agent’s subjective reasons and are sufficiently transparent for the agent. Third, this conception of self-transparent action is a questionable idealization. As shown by psychological research on self-assessment, motivated reasoning, and terror management theory, humans oftentimes have only a limited understanding of their conduct. Self-deception is rather the rule than the exception. Fourth, taking the limited self-transparency of practical reason seriously leads to a socially contextualized conception of moral responsibility.
This paper studies differential graded modules and representations up to homotopy of Lie n-algebroids, for general \(n\in {\mathbb {N}}\). The adjoint and coadjoint modules are described, and the corresponding split versions of the adjoint and coadjoint representations up to homotopy are explained. In particular, the case of Lie 2-algebroids is analysed in detail. The compatibility of a Poisson bracket with the homological vector field of a Lie n-algebroid is shown to be equivalent to a morphism from the coadjoint module to the adjoint module, leading to an alternative characterisation of non-degeneracy of higher Poisson structures. Moreover, the Weil algebra of a Lie n-algebroid is computed explicitly in terms of splittings, and representations up to homotopy of Lie n-algebroids are used to encode decomposed VB-Lie n-algebroid structures on double vector bundles.
Posture and mobility are important aspects for spinal health. In the context of low back pain, strategies to alter postural anomalies (e.g., hyper/hypolordosis, hyper/hypokyphosis) and mobility deficits (e.g., bending restrictions) have been of interest to researchers and clinicians. Machine-based isolated lumbar extension resistance exercise (ILEX) has been used successfully for rehabilitation of patients suffering from low back pain. The aim of this study was to analyse the immediate effects of ILEX on spinal posture and mobility. In this interventional cohort study, the posture and mobility measures of 33 healthy individuals (m = 17, f = 16; mean age 30.0 years) were taken using the surface-based Spinal Mouse system (IDIAG M360©, Fehraltdorf, Switzerland). Individuals performed one exercise set to full exhaustion with an ILEX-device (Powerspine, Wuerzburg, Germany) in a standardized setup, including uniform range of motion and time under tension. Scans were made immediately before and after the exercise. There was an immediate significant decrease in standing lumbar lordosis and thoracic kyphosis. No change could be observed in standing pelvic tilt. Mobility measures showed a significant decrease in the lumbar spine and an increase in the sacrum. The results show that ILEX alters spine posture and mobility in the short-term, which may benefit certain patient groups.
We analyze a variety of integration schemes for the momentum space functional renormalization group calculation with the goal of finding an optimized scheme. Using the square lattice t-t' Hubbard model as a testbed we define and benchmark the quality. Most notably we define an error estimate of the solution for the ordinary differential equation circumventing the issues introduced by the divergences at the end of the FRG flow. Using this measure to control for accuracy we find a threefold reduction in number of required integration steps achievable by choice of integrator. We herewith publish a set of recommended choices for the functional renormalization group, shown to decrease the computational cost for FRG calculations and representing a valuable basis for further investigations.
We analyze the mathematical models of two classes of physical phenomena. The first class of phenomena we consider is the interaction between one or more insulating rigid bodies and an electrically conducting fluid, inside of which the bodies are contained, as well as the electromagnetic fields trespassing both of the materials. We take into account both the cases of incompressible and compressible fluids. In both cases our main result yields the existence of weak solutions to the associated system of partial differential equations, respectively. The proofs of these results are built upon hybrid discrete-continuous approximation schemes: Parts of the systems are discretized with respect to time in order to deal with the solution-dependent test functions in the induction equation. The remaining parts are treated as continuous equations on the small intervals between consecutive discrete time points, allowing us to employ techniques which do not transfer to the discretized setting. Moreover, the solution-dependent test functions in the momentum equation are handled via the use of classical penalization methods.
The second class of phenomena we consider is the evolution of a magnetoelastic material. Here too, our main result proves the existence of weak solutions to the corresponding system of partial differential equations. Its proof is based on De Giorgi's minimizing movements method, in which the system is discretized in time and, at each discrete time point, a minimization problem is solved, the associated Euler-Lagrange equations of which constitute a suitable approximation of the original equation of motion and magnetic force balance. The construction of such a minimization problem is made possible by the realization that, already on the continuous level, both of these equations can be written in terms of the same energy and dissipation potentials. The functional for the discrete minimization problem can then be constructed on the basis of these potentials.
Knowledge about ransomware is important for protecting sensitive data and for participating in public debates about suitable regulation regarding its security. However, as of now, this topic has received little to no attention in most school curricula. As such, it is desirable to analyze what citizens can learn about this topic outside of formal education, e.g., from news articles. This analysis is both relevant to analyzing the public discourse about ransomware, as well as to identify what aspects of this topic should be included in the limited time available for this topic in formal education. Thus, this paper was motivated both by educational and media research. The central goal is to explore how the media reports on this topic and, additionally, to identify potential misconceptions that could stem from this reporting. To do so, we conducted an exploratory case study into the reporting of 109 media articles regarding a high-impact ransomware event: the shutdown of the Colonial Pipeline (located in the east of the USA). We analyzed how the articles introduced central terminology, what details were provided, what details were not, and what (mis-)conceptions readers might receive from them. Our results show that an introduction of the terminology and technical concepts of security is insufficient for a complete understanding of the incident. Most importantly, the articles may lead to four misconceptions about ransomware that are likely to lead to misleading conclusions about the responsibility for the incident and possible political and technical options to prevent such attacks in the future.
Whether, and in what sense, research in phenomenology and phenomenological psychopathology has—in addition to its descriptive and hermeneutic value—explanatory power is somewhat controversial. This paper shows why it is legitimate to recognize such explanatory power. To this end, the paper analyzes two central concerns underlying the debate about explanation in phenomenology: (a) the warning against reductionism, which is implicit in a conception of causal explanation exclusively based on models of natural/physical causation; and (b) the warning against top-down generalizations, which neglect the specificity of the individual. While acknowledging that these two caveats express serious concerns regarding the debate on explanatory models, I show that phenomenology has the resources to respond to them. These can be found in analyses of different types of causation relating to different regions of reality and in the structure of explanatory models based on exemplarity. On the basis of these analyses, I defend a pluralist account vis-à-vis explanatory models.
Kef couples the potassium efflux with proton influx in gram-negative bacteria. The resulting acidification of the cytosol efficiently prevents the killing of the bacteria by reactive electrophilic compounds. While other degradation pathways for electrophiles exist, Kef is a short-term response that is crucial for survival. It requires tight regulation since its activation comes with the burden of disturbed homeostasis. Electrophiles, entering the cell, react spontaneously or catalytically with glutathione, which is present at high concentrations in the cytosol. The resulting glutathione conjugates bind to the cytosolic regulatory domain of Kef and trigger activation while the binding of glutathione keeps the system closed. Furthermore, nucleotides can bind to this domain for stabilization or inhibition. The binding of an additional ancillary subunit, called KefF or KefG, to the cytosolic domain is required for full activation. The regulatory domain is termed K+ transport–nucleotide binding (KTN) or regulator of potassium conductance (RCK) domain, and it is also found in potassium uptake systems or channels in other oligomeric arrangements. Bacterial RosB-like transporters and K+ efflux antiporters (KEA) of plants are homologs of Kef but fulfill different functions. In summary, Kef provides an interesting and well-studied example of a highly regulated bacterial transport system.
Neisseria meningitidis (the meningococcus) is one of the major causes of bacterial meningitis, a life-threatening inflammation of the meninges. Traversal of the meningeal blood-cerebrospinal fluid barrier (mBCSFB), which is composed of highly specialized brain endothelial cells (BECs), and subsequent interaction with leptomeningeal cells (LMCs) are critical for disease progression. Due to the human-exclusive tropism of N. meningitidis, research on this complex host-pathogen interaction is mostly limited to in vitro studies. Previous studies have primarily used peripheral or immortalized BECs alone, which do not retain relevant barrier phenotypes in culture. To study meningococcal interaction with the mBCSFB in a physiologically more accurate context, BEC-LMC co-culture models were developed in this project using BEC-like cells derived from induced pluripotent stem cells (iBECs) or hCMEC/D3 cells in combination with LMCs derived from tumor biopsies.
Distinct BEC and LMC layers as well as characteristic expression of cellular markers were observed using transmission electron microscopy (TEM) and immunofluorescence staining. Clear junctional expression of brain endothelial tight and adherens junction proteins was detected in the iBEC layer. LMC co-culture increased iBEC barrier tightness and stability over a period of seven days, as determined by sodium fluorescein (NaF) permeability and transendothelial electrical resistance (TEER). Infection experiments demonstrated comparable meningococcal adhesion and invasion of the BEC layer in all models tested, consistent with previously published data. While only few bacteria crossed the iBEC-LMC barrier initially, transmigration rates increased substantially over 24 hours, despite constant high TEER. After 24 hours of infection, deterioration of the barrier properties was observed including loss of TEER and altered expression of tight and adherens junction components. Reduced mRNA levels of ZO-1, claudin-5, and VE-cadherin were detected in BECs from all models. qPCR and siRNA knockdown data suggested that transcriptional downregulation of these genes was potentially but not solely mediated by Snail1. Immunofluorescence staining showed reduced junctional coverage of occludin, indicating N. meningitidis-induced post-transcriptional modulation of this protein, as previous studies have suggested. Together, these results suggest a potential combination of transcellular and paracellular meningococcal traversal of the mBCSFB, with the more accessible paracellular route becoming available upon barrier disruption after prolonged N. meningitidis infection. Finally, N. meningitidis induced cellular expression of pro-inflammatory cytokines and chemokines such as IL-8 in all mBCSFB models. Overall, the work described in this thesis highlights the usefulness of advanced in vitro models of the mBCSFB that mimic native physiology and exhibit relevant barrier properties to study infection with meningeal pathogens such as N. meningitidis.
Senaratne, Hansi ; Mühlbauer, Martin ; Kiefl, Ralph ; Cárdenas, Andrea ; Prathapan, Lallu ; Riedlinger, Torsten ; Biewer, Carolin ; Taubenböck, Hannes
The fastest growing regional crisis is happening in West Africa today, with over 8 million people considered persons of concern. A culmination of identity politics, climate-driven disasters, and extreme poverty has led to this humanitarian crisis in the region and is exacerbated by a lack of political will and misplaced media attention. The current state of the art does not present sufficient investigations of the thematic and spatial coverage of news media of this crisis in this region. This paper studies the spatial coverage of this crisis as reported in the media, and the themes associated with those locations, based on a curated dataset. For the time frame 12 March to 15 September 2021, 2017 news articles related to the refugee crisis in West Africa were examined and manually coded based on (1) the geographical locations mentioned in each article; (2) the themes found in the articles in reference to a location (e.g., Relocation of people in Abuja). The dataset introduces a thematic dimension, as never achieved before, to the conflict-ridden areas in West Africa. A comparative analysis with UNHCR (United Nations High Commissioner for Refugees) data showed that 96.8% of refugee-related locations in West Africa were not covered by news during the considered time frame. Contrastingly, 80.4% of locations mentioned in the news do not appear in the UNHCR repository. Most news articles published during this time frame reported on Development aid or Political statements. Linear multiple regression analysis showed GDP per capita and political stability to be among the most influential determinants of news coverage.
Husserl’s taxonomy of action
(2022)
In the present article I discuss, in confrontation with the most recent studies on Husserl’s phenomenology of acting and willing, the taxonomy of action that is collected in the volume ‘Wille und Handlung’ of the Husserliana edition Studien zur Struktur des Bewussteins. In so doing, I first present Husserl’s universal characterization of action (Handlung) as a volitional process (willentlicher Vorgang). Then, after clarifying what it means for a process to have a character of volitionality (Willentlichkeit), I illustrate the various types of actions, which Husserl distinguishes as ‘straightforward’ (schlicht) or ‘deciding’ (entscheidend), ‘primary’ (primär) or ‘secondary’ (sekundär), ‘inner’ (innere) or ‘outer’ (äußere), ‘immediate’ (unmittelbar) or mediate (mittelbar), ‘simple’ (einfach) or ‘compound’ (zusammengesetzt). Finally, I consider Husserl’s discussion of the direction and foundation of action.
A well-known result for the interference of two single-mode fields is that the degree of coherence and the degree of indistinguishability are the same when we consider the detection of a single photon. In this article, we present the relation between the degree of coherence, path indistinguishability and the fringe visibility considering interference of multiple numbers of single-mode fields while being interested in the detection of a single photon only. We will also mention how Born’s rule of interference for multiple sources is reflected in these results.
Wienrich, Carolin ; Carolus, Astrid ; Markus, André ; Augustin, Yannik ; Pfister, Jan ; Hotho, Andreas
Social patterns and roles can develop when users talk to intelligent voice assistants (IVAs) daily. The current study investigates whether users assign different roles to devices and how this affects their usage behavior, user experience, and social perceptions. Since social roles take time to establish, we equipped 106 participants with Alexa or Google assistants and some smart home devices and observed their interactions for nine months. We analyzed diverse subjective (questionnaire) and objective data (interaction data). By combining social science and data science analyses, we identified two distinct clusters—users who assigned a friendship role to IVAs over time and users who did not. Interestingly, these clusters exhibited significant differences in their usage behavior, user experience, and social perceptions of the devices. For example, participants who assigned a role to IVAs attributed more friendship to them used them more frequently, reported more enjoyment during interactions, and perceived more empathy for IVAs. In addition, these users had distinct personal requirements, for example, they reported more loneliness. This study provides valuable insights into the role-specific effects and consequences of voice assistants. Recent developments in conversational language models such as ChatGPT suggest that the findings of this study could make an important contribution to the design of dialogic human–AI interactions.
Dedukh, Dmitrij ; Da Cruz, Irene ; Kneitz, Susanne ; Marta, Anatolie ; Ormanns, Jenny ; Tichopád, Tomáš ; Lu, Yuan ; Alsheimer, Manfred ; Janko, Karel ; Schartl, Manfred
Unisexual reproduction, which generates clonal offspring, is an alternative strategy to sexual breeding and occurs even in vertebrates. A wide range of non-sexual reproductive modes have been described, and one of the least understood questions is how such pathways emerged and how they mechanistically proceed. The Amazon molly, Poecilia formosa, needs sperm from males of related species to trigger the parthenogenetic development of diploid eggs. However, the mechanism, of how the unreduced female gametes are produced, remains unclear. Cytological analyses revealed that the chromosomes of primary oocytes initiate pachytene but do not proceed to bivalent formation and meiotic crossovers. Comparing ovary transcriptomes of P. formosa and its sexual parental species revealed expression levels of meiosis-specific genes deviating from P. mexicana but not from P. latipinna. Furthermore, several meiosis genes show biased expression towards one of the two alleles from the parental genomes. We infer from our data that in the Amazon molly diploid oocytes are generated by apomixis due to a failure in the synapsis of homologous chromosomes. The fact that this failure is not reflected in the differential expression of known meiosis genes suggests the underlying molecular mechanism may be dysregulation on the protein level or misexpression of a so far unknown meiosis gene, and/or hybrid dysgenesis because of compromised interaction of proteins from diverged genomes.
In dieser Arbeit wurde einerseits retrospektiv untersucht, wie sich supratentorielle und infratentorielle Ependymome bildmorphologisch unterscheiden, ob Lokalrezidive eines Ependymoms dessen Bildeigenschaften teilen und welche Art von Rezidiven im Verlauf auftreten können. Die von uns beschriebenen Bildcharakteristika der Ependymome decken sich zum größten Teil mit bereits veröffentlichten Studien. Supratentorielle Ependymome unterscheiden sich signifikant in ihrer Bildmorphologie im Vergleich zu Ependymome der hintern Schädelgrube. Alle pädiatrischen Ependymompatienten/innen in unserem Kollektiv erkrankten an mindestens einem Rezidiv. Am häufigsten traten Lokalrezidive gefolgt von Meningeosen im ersten Rezidiv auf. Seltener fanden sich transiente postradiogene Läsionen, Diffuse intrinsische Ponsgliome und extraneurale Metastasen. Der bildmorphologische Vergleich, Primarius versus Lokalrezidiv ergab überwiegend ähnliche bildgebende Eigenschaften vor allem im Signalverhalten, Tumorbegrenzung und KM-Aufnahme sowie KM anreichernder Tumoranteil. Die kranielle Meningeose präsentierte sich zum ersten Rezidivzeitpunkt different zum Primärtumor. Die extraneuralen Metastasen hatten bildcharakteristisch Ähnlichkeiten zum Primärtumor. Bei der Bewertung neuer intraparenchymaler Läsionen sollte immer der zeitliche Zusammenhang zur letzten Therapie und damit mögliche vorübergehende postradiologischen Veränderungen berücksichtigt werden.
Letztlich ist das pädiatrische Ependymom und Ependymomrezidiv ein komplexes und immer noch unvollständiges erfasstes Krankheitsbild. Durch umfangreichere Studien und die Zusammenführung dieser Ergebnisse könnte schlussendlich die Komplexität des Krankheitsbildes und somit die Therapieoptionen verbessert werden. Durch unsere Studie gelang einerseits die Beschreibung und der Vergleich des primären Ependymoms bezüglich supra- und infratentorieller Lokalisation und andererseits gelang eine neuroradiologische Beschreibung von Ependymomrezidiven im Vergleich zum primären Ependymom, wodurch in Zukunft die Nachsorge der Ependymomrezidive und die Therapieoptionen optimiert werden könnten.
Triyasmono, Liling ; Schollmayer, Curd ; Schmitz, Jens ; Hovah, Emilie ; Lombo, Cristian ; Schmidt, Sebastian ; Holzgrabe, Ulrike
Red fruit oil (RFO) can be extracted from fruits of Pandanus conoideus, Lam., an endogenous plant of Papua, Indonesia. It is a commonly used essential original traditional medicine. By applying a newly developed quantitative \(^1\)H NMR (qNMR) spectroscopy method for quality assessment, a simultaneous determination of the saponification value (SV), acid value (AV), ester value (EV), and iodine value (IV) in RFO was possible. Dimethyl sulfone (DMSO\(_2\)) was used as an internal standard. Optimization of NMR parameters, such as NMR pulse sequence, relaxation delay time, and receiver gain, finally established the \(^1\)H NMR-based quantification approach. Diagnostic signals of the internal standard at δ = 2.98 ppm, SV at δ = 2.37–2.20 ppm, AV at δ = 2.27–2.20 ppm, EV at δ = 2.37–2.27 ppm, and IV at δ = 5.37–5.27 ppm, respectively, were used for quantitative analysis. The method was validated concerning linearity (R\(^2\) = 0.999), precision (less than 0.83%), and repeatability in the range 99.17–101.17%. Furthermore, this method was successfully applied to crude RFO, crude RFO with palmitic and oleic acid addition, and nine commercial products. The qNMR results for the respective fat values are in accordance with the results of standard methods, as can be seen from the F- and t-test (< 1.65 and < 1.66, respectively). The fundamental advantages of qNMR, such as its rapidity and simplicity, make it a feasible and existing alternative to titration for the quality control of RFO.
Capillary electrophoresis was chosen as cost-effective and robust method to separate ketamine enantiomers. For the method development, first different native and modified cyclodextrins were tested. The most promising chiral selector was α-cyclodextrin. A design of experiments (DoE) was carried out, which started with the screening of relevant factors. Based on these results, the method was optimized according to the significant factors (buffer, cyclodextrin concentration, pH value, voltage, temperature) of the screening based on the response resolution and migration time of the later migrating enantiomer. The optimized conditions consisted of a background electrolyte with 275 mM TRIS, adjusted with 85% phosphoric acid to a pH of 2.50, and 50 mM α-cyclodextrin, at a temperature of 15 °C, an applied voltage of 30 kV and an injection pressure of 1.0 psi for 10 s. A fused-silica capillary with a total length of 70 cm and an effective length to the detector of 60 cm was used. The method was validated according to ICH guideline Q2 R(1). The limit of quantification was 3.51 µg mL\(^{−1}\) for S-ketamine and 3.98 µg mL\(^{−1}\)for R-ketamine. The method showed good linearity for racemic ketamine with R\(^2\) of 0.9995 for S-ketamine and 0.9994 for R-ketamine. The lowest quantifiable content of S-ketamine found in R-ketamine was 0.45%.
The demand for LIB with enhanced energy densities leads to increased utilization of the space within the confinements of the battery housing or to the use of electrode material with increased intrinsic specific energy densities. Both requirements result in more stress on the battery electrodes and separator during cycling or aging. However, the effect of mechanical strain on the cell’s electrochemistry and thus the performance of batteries is rather unexplored compared to the impact of current or temperature, for example. The objective of this thesis was to give a better understanding of the electrochemical and mechanical interplay in current- and next-generation lithium based battery cells. Therefore, the thesis was structured into the investigations on SoA and next-generation LIBs. For SoA LIBs, the investigations of the interplay started at laboratory scale. Here, the expansion of various electrodes and also the impact of mechanical pressure and its distribution on the performance of the cells were
studied. The investigations at laboratory scale was followed by an examination of the electrochemical and mechanical interactions on large format commercial LIBs which are used in BEVs. Accordingly, the effect of bracing and its effect on the performance was studied in an aging and post-mortem study. To gain a deeper understanding of the mechanical changes in LIBs, an ultrasonic study was performed for pouch cells. Here, the mechanical changes were further investigated in dependence of SoC and SoH. The effects of the mechanical stress on the performance for next-generation batteries were studied at laboratory scale. In the beginning, the expansion of next-generation anode materials such as silicon and lithium was compared with today’s anode materials. Furthermore, the effect of mechanical pressure and electrolyte on the irreversible dilation and performance was investigated for lithium metal cells. Overall, it was shown that pressure has a significant effect on the performance of today’s and also future LIBs. The interplay of the electrochemical and mechanical effects inside a LIB has a considerable impact on the lifetime, capacity fading and impedance increase of the batteries.
Efficient spatial orientation in the natural environment is crucial for the survival of most animal species. Cataglyphis desert ants possess excellent navigational skills. After far-ranging foraging excursions, the ants return to their inconspicuous nest entrance using celestial and panoramic cues. This review focuses on the question about how naïve ants acquire the necessary spatial information and adjust their visual compass systems. Naïve ants perform structured learning walks during their transition from the dark nest interior to foraging under bright sunlight. During initial learning walks, the ants perform rotational movements with nest-directed views using the earth’s magnetic field as an earthbound compass reference. Experimental manipulations demonstrate that specific sky compass cues trigger structural neuronal plasticity in visual circuits to integration centers in the central complex and mushroom bodies. During learning walks, rotation of the sky-polarization pattern is required for an increase in volume and synaptic complexes in both integration centers. In contrast, passive light exposure triggers light-spectrum (especially UV light) dependent changes in synaptic complexes upstream of the central complex. We discuss a multisensory circuit model in the ant brain for pathways mediating structural neuroplasticity at different levels following passive light exposure and multisensory experience during the performance of learning walks.
Angesichts aktueller und zurückliegender Migrations- und Fluchtprozesse in Deutschland kommen Jugendliche der Residenzgesellschaft in verschiedenen Bereichen ihres Lebens mit Menschen mit Flucht- oder Migrationserfahrung in Kontakt, woraus sich Chancen und Entwicklungspotenziale, aber auch Herausforderungen ergeben. Beispielsweise kann vermehrter interkultureller Kontakt auf individueller Ebene zur Weiterentwicklung von Toleranz und Empathie führen. Jedoch können Jugendliche der Residenzgesellschaft auf vermehrte Zuwanderung auch mit einem Gefühl der Unsicherheit und einer ablehnenden Haltung gegenüber Menschen mit Flucht- oder Migrationserfahrung reagieren. Diese Reaktionen können durch einseitige oder negative Medienberichte zum Themenkomplex Flucht und Migration verstärkt werden. Um Chancen und Entwicklungspotenziale ausschöpfen sowie Herausforderungen im Kontext von Flucht und Migration bewältigen zu können, müssen Jugendliche in der Entwicklung interkultureller Kompetenz gefördert werden. Interkulturelle Kompetenz ist eine wesentliche Voraussetzung für das Zusammenleben in einer pluralistischen Gesellschaft und daher ein bedeutsames Bildungs- und Erziehungsziel für Schule und Unterricht.
Die Zielstellung der vorliegenden Forschungsarbeit ist demnach die praxis- und theorieorientierte Entwicklung und Evaluation eines Unterrichtskonzepts zur Förderung interkultureller Kompetenz unter Verwendung digitaler Medienangebote und Gestaltung medialer Beiträge.
Hinsichtlich theoretischer Grundlagen zu interkultureller Kompetenz wird vor dem Hintergrund eines an Offenheit, Prozesshaftigkeit und Heterogenität orientierten Kulturbegriffs Interkulturalität als sozialer Prozess verstanden, in dem sich Personen unterschiedlicher kultureller bzw. kollektiver Zugehörigkeiten begegnen, miteinander interagieren und kommunizieren. Interkulturelle Kompetenz setzt sich aus Wissen (kognitive Dimension), Einstellungen (affektive Dimension) sowie Verhaltensweisen (behaviorale Dimension) zusammen und es wird angenommen, dass diese erlernt und gefördert werden kann. Vorgehensweisen zur Entwicklung interkultureller Kompetenz sollten die kognitive, affektive und behaviorale Dimension interkultureller Kompetenz adressieren, die Reflexion authentischer, kritischer Überschneidungssituationen einbeziehen sowie realweltliche, interkulturelle Begegnungen als Lerngelegenheiten aufgreifen.
Bezüglich theoretischer Grundlagen zum Lehren und Lernen mit Medien stellt vor dem Hintergrund verschiedener Ansätze zum Lehren und Lernen mit Medien die handlungs- und entwicklungsorientierte Didaktik eine bedeutsame Grundlage für die vorliegende Forschungsarbeit dar. Sie wird bezüglich der Prinzipien der Situations-, Bedürfnis-, Erfahrungs- und Entwicklungsorientierung, der Bedeutsamkeit komplexer, lernprozessanregender Aufgabenstellungen und einer idealtypischen Strukturierung von Unterricht mit theoretischen Grundlagen interkultureller Kompetenz und Vorgehensweisen zu ihrer Förderung in Beziehung gesetzt.
Hinsichtlich des forschungsmethodischen Vorgehens wird auf Basis einer Gegenüberstellung verschiedener Ansätze der gestaltungsorientierten Bildungsforschung der Ansatz einer praxis- und theorieorientierten Entwicklung und Evaluation von Konzepten unterrichtlichen Handelns für die vorliegende Forschungsarbeit begründet ausgewählt und seine Umsetzung erläutert.
Im Rahmen der ersten Studie wird auf der Basis theoretischer und empirischer Grundlagen interkultureller Kompetenz und didaktischer Zugänge ein pädagogisches Konzept zur Förderung interkultureller Kompetenz von Schülerinnen und Schülern der Sekundarstufe I unter Verwendung digitaler Medien entwickelt und für eine achte Klasse am Gymnasium konkretisiert. Das Konzept wird hinsichtlich seiner Zielerreichung sowie auftretender Nebenwirkungen unter Einsatz von Mixed Methods evaluiert. Die Ergebnisse weisen unter anderem darauf hin, dass das entwickelte Unterrichtskonzept zur Förderung interkultureller Kompetenz der Schülerinnen und Schüler beigetragen hat.
Die zweite Studie stellt eine ergänzende qualitative Studie dar, mit dem Ziel, die gemeinsame Mediengestaltung in Zusammenarbeit von Lernenden mit und ohne Flucht- bzw. Migrationserfahrung als bedeutsame Lernaktivität des Unterrichtskonzepts vertiefend zu untersuchen und Vorgehensweisen des kollaborativen Gestaltungsprozesses, die aus der Perspektive der Schülerinnen und Schüler wichtig sind, zu identifizieren. Hierzu werden die subjektiven Sichtweisen der Gymnasiastinnen und Gymnasiasten auf die Gestaltung medialer Beiträge in interkultureller Begegnung unter Bezugnahme auf interkulturelle Sensibilität in Fokusgruppen erhoben und qualitativ-inhaltsanalytisch ausgewertet. Die Ergebnisse der qualitativen Inhaltsanalyse zeigen, dass im Rahmen der Mediengestaltung verschiedene Komponenten interkultureller Sensibilität angesprochen wurden. Beispielsweise geben einige Gymnasiastinnen und Gymnasiasten an, dass ihnen sowohl die Zusammenarbeit mit den Mittelschülerinnen und -schülern als auch die gemeinsame Mediengestaltung Freude bereitete.
In der dritten Studie werden die von den Schülerinnen und Schülern gestalteten Medienbeiträge aus interkulturell-kommunikativer und medienbezogener Perspektive vertiefend analysiert. Die Auswertung erfolgt durch qualitative Inhaltsanalysen hinsichtlich wesentlicher Aspekte der Kommunikationssituation, der Medienmerkmale sowie Bezugspunkten zur behavioralen Dimension interkultureller Kompetenz. Aus den Ergebnissen der Videoanalysen geht unter anderem hervor, dass die interkulturellen Begegnungssituationen, die im Rahmen der Beiträge dargestellt werden, aus kommunikationstheoretischer Perspektive komplex und vielschichtig sind.
Nach einer abschließenden kritischen Methodenreflexion werden Ergebnisse der Studien zusammengeführt und interpretiert. Beispielsweise geht aus der Zusammenführung der Ergebnisse aus der ersten und der zweiten Studie hervor, dass sich zwischen Pre- und Post-Test eine statistisch signifikante Steigerung des Mittelwertes der Komponente Aufmerksamkeit während der interkulturellen Interaktion ergibt, was unter Berücksichtigung der Resultate aus den Fokusgruppen als gesteigertes Interesse der Probandinnen und Probanden an den Schülerinnen und Schülern der Mittelschulklasse im Laufe der gemeinsamen Videogestaltung gedeutet werden kann. Die vergleichende Betrachtung von Ergebnissen aus der ersten und der dritten Studie zeigt, dass mit einer Steigerung des Summenscores der behavioralen Dimension interkultureller Kompetenz Bezüge zu verschiedenen Komponenten der behavioralen Dimension im Rahmen der gestalteten Videos in Verbindung stehen.
Hinsichtlich der Konsequenzen für zukünftige Forschung wird abschließend auf die Notwendigkeit der Entwicklung von Verfahren zur Erfassung interkultureller Kompetenz von Jugendlichen mit unzureichenden Deutschkenntnissen verwiesen. Bezüglich der Praxis in Schule und Unterricht ist die Förderung interkultureller Kompetenz unter Verwendung und Gestaltung digitaler Medienangebote bzw. -beiträge als schulische Querschnittsaufgabe aller Jahrgangsstufen, Fächer und Schulformen wahrzunehmen. Insgesamt leistet die vorliegende Forschungsarbeit damit einen Beitrag zur Verknüpfung der Förderung interkultureller Kompetenz mit der interkulturell-kooperativen Gestaltung medialer Beiträge.
Fricke, Ute ; Redlich, Sarah ; Zhang, Jie ; Tobisch, Cynthia ; Rojas-Botero, Sandra ; Benjamin, Caryl S. ; Englmeier, Jana ; Ganuza, Cristina ; Riebl, Rebekka ; Uhler, Johannes ; Uphus, Lars ; Ewald, Jörg ; Kollmann, Johannes ; Steffan-Dewenter, Ingolf
Higher temperatures can increase metabolic rates and carbon demands of invertebrate herbivores, which may shift leaf-chewing herbivory among plant functional groups differing in C:N (carbon:nitrogen) ratios. Biotic factors influencing herbivore species richness may modulate these temperature effects. Yet, systematic studies comparing leaf-chewing herbivory among plant functional groups in different habitats and landscapes along temperature gradients are lacking. This study was conducted on 80 plots covering large gradients of temperature, plant richness and land use in Bavaria, Germany. We investigated proportional leaf area loss by chewing invertebrates (‘herbivory’) in three plant functional groups on open herbaceous vegetation. As potential drivers, we considered local mean temperature (range 8.4–18.8 °C), multi-annual mean temperature (range 6.5–10.0 °C), local plant richness (species and family level, ranges 10–51 species, 5–25 families), adjacent habitat type (forest, grassland, arable field, settlement), proportion of grassland and landscape diversity (0.2–3 km scale). We observed differential responses of leaf-chewing herbivory among plant functional groups in response to plant richness (family level only) and habitat type, but not to grassland proportion, landscape diversity and temperature—except for multi-annual mean temperature influencing herbivory on grassland plots. Three-way interactions of plant functional group, temperature and predictors of plant richness or land use did not substantially impact herbivory. We conclude that abiotic and biotic factors can assert different effects on leaf-chewing herbivory among plant functional groups. At present, effects of plant richness and habitat type outweigh effects of temperature and landscape-scale land use on herbivory among legumes, forbs and grasses.
Government funding of research beyond biomedicine: challenges and opportunities for neuroethology
(2022)
Curiosity-driven research is fundamental for neuroethology and depends crucially on governmental funding. Here, we highlight similarities and differences in funding of curiosity-driven research across countries by comparing two major funding agencies—the National Science Foundation (NSF) in the United States and the German Research Foundation (Deutsche Forschungsgemeinschaft, DFG). We interviewed representatives from each of the two agencies, focusing on general funding trends, levels of young investigator support, career-life balance, and international collaborations. While our analysis revealed a negative trend in NSF funding of biological research, including curiosity-driven research, German researchers in these areas have benefited from a robust positive trend in DFG funding. The main reason for the decrease in curiosity-driven research in the US is that the NSF has only partially been able to compensate for the funding gap resulting from the National Institutes of Health restricting their support to biomedical research using select model organisms. Notwithstanding some differences in funding programs, particularly those relevant for scientists in the postdoctoral phase, both the NSF and DFG clearly support curiosity-driven research.
Englmeier, Jana ; Mitesser, Oliver ; Benbow, M. Eric ; Hothorn, Torsten ; von Hoermann, Christian ; Benjamin, Caryl ; Fricke, Ute ; Ganuza, Cristina ; Haensel, Maria ; Redlich, Sarah ; Riebl, Rebekka ; Rojas Botero, Sandra ; Rummler, Thomas ; Steffan-Dewenter, Ingolf ; Stengel, Elisa ; Tobisch, Cynthia ; Uhler, Johannes ; Uphus, Lars ; Zhang, Jie ; Müller, Jörg
Land-use intensification and climate change threaten ecosystem functions. A fundamental, yet often overlooked, function is decomposition of necromass. The direct and indirect anthropogenic effects on decomposition, however, are poorly understood. We measured decomposition of two contrasting types of necromass, rat carrion and bison dung, on 179 study sites in Central Europe across an elevational climate gradient of 168–1122 m a.s.l. and within both local and regional land uses. Local land-use types included forest, grassland, arable fields, and settlements and were embedded in three regional land-use types (near-natural, agricultural, and urban). The effects of insects on decomposition were quantified by experimental exclusion, while controlling for removal by vertebrates. We used generalized additive mixed models to evaluate dung weight loss and carrion decay rate along elevation and across regional and local land-use types. We observed a unimodal relationship of dung decomposition with elevation, where greatest weight loss occurred between 600 and 700 m, but no effects of local temperature, land use, or insects. In contrast to dung, carrion decomposition was continuously faster with both increasing elevation and local temperature. Carrion reached the final decomposition stage six days earlier when insect access was allowed, and this did not depend on land-use effect. Our experiment identified different major drivers of decomposition on each necromass form. The results show that dung and carrion decomposition are rather robust to local and regional land use, but future climate change and decline of insects could alter decomposition processes and the self-regulation of ecosystems.
Shirakashi, Ryo ; Sisario, Dmitri ; Taban, Danush ; Korsa, Tessa ; Wanner, Sophia B. ; Neubauer, Julia ; Djuzenova, Cholpon S. ; Zimmermann, Heiko ; Sukhorukov, Vladimir L.
Erythrocyte ghost formation via hemolysis is a key event in the physiological clearance of senescent red blood cells (RBCs) in the spleen. The turnover rate of millions of RBCs per second necessitates a rapid efflux of hemoglobin (Hb) from RBCs by a not yet identified mechanism. Using high-speed video-microscopy of isolated RBCs, we show that electroporation-induced efflux of cytosolic ATP and other small solutes leads to transient cell shrinkage and echinocytosis, followed by osmotic swelling to the critical hemolytic volume. The onset of hemolysis coincided with a sudden self-propelled cell motion, accompanied by cell contraction and Hb-jet ejection. Our biomechanical model, which relates the Hb-jet-driven cell motion to the cytosolic pressure generation via elastic contraction of the RBC membrane, showed that the contributions of the bilayer and the bilayer-anchored spectrin cytoskeleton to the hemolytic cell motion are negligible. Consistent with the biomechanical analysis, our biochemical experiments, involving extracellular ATP and the myosin inhibitor blebbistatin, identify the low abundant non-muscle myosin 2A (NM2A) as the key contributor to the Hb-jet emission and fast hemolytic cell motion. Thus, our data reveal a rapid myosin-based mechanism of hemolysis, as opposed to a much slower diffusive Hb efflux.
Development Of A Human iPSC-Derived Cortical Neuron Model Of Adaptor- Protein-Complex-4-Deficiency
(2024)
Adaptor-protein-4-deficiency (AP-4-deficiency) is an autosomal-recessive childhood- onset form of complicated hereditary spastic paraplegia (HSP) caused by bi-allelic loss- of-function mutations in one of the four subunits of the AP-4-complex. These four conditions are named SPG47 (AP4B1, OMIM #614066), SPG50 (AP4M1, OMIM #612936), SPG51 (AP4E1, OMIM #613744) and SPG52 (AP4S1, OMIM #614067), respectively and all present with global developmental delay, progressive spasticity and seizures. Imaging features include a thinning of the corpus callosum, ventriculomegaly and white matter changes. AP-4 is a highly conserved heterotetrameric complex, which is responsible for polarized sorting of transmembrane cargo including the autophagy- related protein 9 A (ATG9A). Loss of any of the four subunits leads to an instable complex and defective sorting of AP-4-cargo. ATG9A is implicated in autophagosome formation and neurite outgrowth. It is missorted in AP-4-deficient cells and CNS-specific knockout of Atg9a in mice results in a phenotype reminiscent of AP-4-deficiency. However, the AP-4-related cellular phenotypes including ATG9A missorting have not been investigated in human neurons.
Thus, the aim of this study is to provide the first human induced pluripotent stem cell- derived (iPSC) cortical neuron model of AP-4-deficiency to explore AP-4-related phenotypes in preparation for a high-content screening. Under the hypothesis that AP-4- deficiency leads to ATG9A missorting, elevated ATG9A levels, impaired autophagy and neurite outgrowth in human iPSC-derived cortical neurons, in vitro biochemical and imaging assays including automated high-content imaging and analysis were applied. First, these phenotypes were investigated in fibroblasts from three patients with compound heterozygous mutations in the AP4B1 gene and their sex-matched parental controls. The same cell lines were used to generate iPSCs and differentiate them into human excitatory cortical neurons.
This work shows that ATG9A is accumulating in the trans-Golgi-network in AP-4- deficient human fibroblasts and that ATG9A levels are increased compared to parental controls and wild type cells suggesting a compensatory mechanism. Protein levels of the AP4E1-subunit were used as a surrogate marker for the AP-4-complex and were decreased in AP-4-deficient fibroblasts with co-immunoprecipitation confirming the instability of the complex. Lentiviral re-expression of the AP4B1-subunit rescues this corroborating the fact that a stable AP-4-complex is needed for ATG9A trafficking. Surprisingly, autophagic flux was present in AP-4-deficient fibroblasts under nutrient- rich and starvation conditions. These phenotypic markers were evaluated in iPSC-derived cortical neurons and here, a robust accumulation of ATG9A in the juxtanuclear area was seen together with elevated ATG9A protein levels. Strikingly, assessment of autophagy markers under nutrient-rich conditions showed alterations in AP-4-deficient iPSC- derived cortical neurons indicating dysfunctional autophagosome formation. These findings point towards a neuron-specific impairment of autophagy and need further investigation. Adding to the range of AP-4-related phenotypes, neurite outgrowth and branching are impaired in AP-4-deficient iPSC-derived cortical neurons as early as 24h after plating and together with recent studies point towards a distinct role of ATG9A in neurodevelopment independent of autophagy.
Together, this work provides the first patient-derived neuron model of AP-4-deficiency and shows that ATG9A is sorted in an AP-4-dependent manner. It establishes ATG9A- related phenotypes and impaired neurite outgrowth as robust markers for a high-content screening. This disease model holds the promise of providing a platform to further study AP-4-deficiency and to search for novel therapeutic targets.
Pyrrolizidine alkaloids (PAs) are secondary plant metabolites, which can be found as contaminant in various foods and herbal products. Several PAs can cause hepatotoxicity and liver cancer via damaging hepatic sinusoidal endothelial cells (HSECs) after hepatic metabolization. HSECs themselves do not express the required metabolic enzymes for activation of PAs. Here we applied a co-culture model to mimic the in vivo hepatic environment and to study PA-induced effects on not metabolically active neighbour cells. In this co-culture model, bioactivation of PA was enabled by metabolically capable human hepatoma cells HepG2, which excrete the toxic and mutagenic pyrrole metabolites. The human cervical epithelial HeLa cells tagged with H2B-GFP were utilized as non-metabolically active neighbours because they can be identified easily based on their green fluorescence in the co-culture. The PAs europine, riddelliine and lasiocarpine induced micronuclei in HepG2 cells, and in HeLa H2B-GFP cells co-cultured with HepG2 cells, but not in HeLa H2B-GFP cells cultured alone. Metabolic inhibition of cytochrome P450 enzymes with ketoconazole abrogated micronucleus formation. The efflux transporter inhibitors verapamil and benzbromarone reduced micronucleus formation in the co-culture model. Furthermore, mitotic disturbances as an additional genotoxic mechanism of action were observed in HepG2 cells and in HeLa H2B-GFP cells co-cultured with HepG2 cells, but not in HeLa H2B-GFP cells cultured alone. Overall, we were able to show that PAs were activated by HepG2 cells and the metabolites induced genomic damage in co-cultured HeLa cells.